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At least 415 records · Page 23

Risk-informed Predictive Analytics To Achieve Cost-effective Condition-based Monitoring And Maintenance Strategy

The research involves developing risk-informed predictive analytic capabilities to achieve condition-based monitoring and maintenance strategies to reduce overall maintenance costs. The research utilizes data (real-time data, periodic data, and institutional knowledge) related to a particular plant asset from a specific nuclear plant site to develop risk-informed predictive analytic algorithms. The developed algorithms and codes are used to optimize the maintenance strategy and estimate/forecast generation costs based on the state of health of the plant asset. Developed codes specifically include 1. Parameter estimation code based on Bayesian inference 2. Statistical data analysis code 3. Feature engineering code 4. Health classifier code 5. Diagnosis code 6. Prognosis code 7. Hazard code 8. Generation risk code 9. Economic code

Agarwal, Vivek↗

Mathematics: The Tao of Data Science

The two pieces, "Ten Research Challenge Areas in Data Science" by Jeannette M. Wing and “Challenges and Opportunities in Statistics and Data Science: Ten Research Areas” by Xuming He and Xihong Lin, provide an impressively complete list of data science challenges from luminaries in the field of data science. They have done an extraordinary job, so this response offers a complementary viewpoint from a mathematical perspective and evangelizes advanced mathematics as a key tool for meeting the challenges they have laid out. Notably, we pick up the themes of scientific understanding of machine learning and deep learning, computational considerations such as cloud computing and scalability, balancing computational and statistical considerations, and inference with limited data. We propose that mathematics is an important key to establishing rigor in the field of data science and as such has an essential role to play in its future.

97 MATHEMATICS AND COMPUTING↗

TPSAS-NF1676L-13040-DND

We examine the feasibility of using airborne lidar data to: 1) infer CRC Convair-580 profiles of submicrometer fraction (SMF) over land (which is the fraction of aerosols with diameters less than 1 micrometer and is closely related to FMF) and 2) provide a proxy for CCN. If these initial Aerosol Extinction Aerosol Effective Radius feasibility studies prove successful, we will then apply these methodologies in subsequent studies to examine the feasibility of using CALIPSO data in a similar manner. We use data acquired by the NASA Langley Research Center airborne High Spectral Resolution Lidar (HSRL) during several recent field missions conducted by NASA, the Department of Energy, and NOAA. The airborne HSRL, which has acquired over 300 hours of data coincident with CALIPSO overpasses, measures aerosol extinction (532 nm), backscatter (532 and 1064 nm), and depolarization (532 and 1064 nm) profiles and thereby provides a dataset directly applicable to the CALIPSO measurements. During several of these field campaigns, airborne in situ measurements were acquired simultaneously within the HSRL “curtains” thereby facilitating direct correlations of the lidar observables to in situ measurements of particle size and composition, including SMF and CCN concentration. Previous studies have used simultaneous in situ measurements of SMF and Angström exponents derived from in situ scattering (Anderson et al., 2005) and remote sensing extinction (Redemann et al. 2009) measurements to build empirical relationships between these parameters. We adopt a similar approach and investigate relationships between the lidar observables, such as backscatter and extinction Angström exponents, with the coincident airborne in situ measurements of SMF and CCN concentration.

Richard Ferrare↗

Zonally averaged thermal balance and stability models for nitrogen polar caps on Triton

Voyager four-color imaging data of Triton are analyzed to calculate the bolometric hemispheric albedo as a function of latitude and longitude. Zonal averages of these data have been incorporated into a thermal balance model involving insolation, reradiation, and latent heat of sublimation of N2 ice for the surface. The current average bolometric albedo of Triton's polar caps is 0.8, implying an effective temperature of 34.2 K and a surface pressure of N2 of 1.6 microbar for unit emissivity. This pressure is an order of magnitude lower than the surface pressure of 18 microbar inferred from Voyager data (Broadfoot et al., 1989; Conrath et al., 1989), a discrepancy that can be reconciled if the emissivity of the N2 on Triton's surface is 0.66. The model predicts that Triton's surface north of 15 deg N latitude is experiencing deposition of N2 frosts, as are the bright portions of the south polar cap near the equator. This result explains why the south cap covers nearly the entire southern hemisphere of Triton.

Stansberry, John A.↗

Characterization of Response Times based on Voice Communication and Traffic Surveillance Data

A barrier to the integration of remotely piloted aircraft operations in the U.S. National Airspace System is the latency of voice communications between the air traffic controller and the remote pilot, and the latency of communication between the aircraft and the remote pilot. The latency can be substantial especially when satellite-based beyond-radio-line-of-sight communication and relay through the aircraft are employed. This study uses voice recordings of controller-pilot communications and aircraft track data to establish a baseline of pilot readback latencies and maneuver detection delays in the current piloted operations. A machine learning pipeline was developed to parse the contents of the air traffic control clearances including the callsigns using natural language processing. After manually validating the results obtained using the pipeline, the average pilot readback latency was found to be about 0.6 seconds. The average latency between the end of maneuver (inferred from track data), initiated by the pilot in response to the clearance, and the end of clearance was found to be about 176 seconds for altitude change commands, 69 seconds for heading change commands, and 182 seconds for speed change commands. The average latency between the beginning of maneuver and the end of clearance was found to be about 17 seconds for altitude change commands, 17seconds for heading change commands, and 25 seconds for speed change commands.

controller-pilot communication, communication late↗

Characterization of Response Times Based on Voice Communication and Traffic Surveillance Data

A barrier to the integration of remotely piloted aircraft operations in the U.S. National Airspace System is the latency of voice communications between the air traffic controller and the remote pilot, and the latency of communication between the aircraft and the remote pilot. The latency can be substantial especially when satellite-based beyond-radio-line-of-sight communication and relay through the aircraft are employed. This study uses voice recordings of controller-pilot communications and aircraft track data to establish a baseline of pilot readback latencies and maneuver detection delays in the current piloted operations. A machine learning pipeline was developed to parse the contents of the air traffic control clearances including the callsigns using natural language processing. After manually validating the results obtained using the pipeline, the average pilot readback latency was found to be about 0.6 seconds. The average latency between the end of maneuver (inferred from track data), initiated by the pilot in response to the clearance, and the end of clearance was found to be about 176 seconds for altitude change commands, 69 seconds for heading change commands, and 182 seconds for speed change commands. The average latency between the beginning of maneuver and the end of clearance was found to be about 17 seconds for altitude change commands, 17seconds for heading change commands, and 25 seconds for speed change commands.

controller-pilot communication↗

Estimating Watershed Subsurface Permeability From Stream Discharge Data Using Deep Neural Networks

Subsurface permeability is a key parameter in watershed models that controls the contribution from the subsurface flow to stream flows. Since the permeability is difficult and expensive to measure directly at the spatial extent and resolution required by fully distributed watershed models, estimation through inverse modeling has had a long history in subsurface hydrology. The wide availability of stream surface flow data, compared to groundwater monitoring data, provides a new data source to infer soil and geologic properties using integrated surface and subsurface hydrologic models. As most of the existing methods have shown difficulty in dealing with highly nonlinear inverse problems, we explore the use of deep neural networks for inversion owing to their successes in mapping complex, highly nonlinear relationships. We train various deep neural network (DNN) models with different architectures to predict subsurface permeability from stream discharge hydrograph at the watershed outlet. The training data are obtained from ensemble simulations of hydrographs corresponding to an permeability ensemble using a fully-distributed, integrated surface-subsurface hydrologic model. The trained model is then applied to estimate the permeability of the real watershed using its observed hydrograph at the outlet. Our study demonstrates that the permeabilities of the soil and geologic facies that make significant contributions to the outlet discharge can be more accurately estimated from the discharge data. Their estimations are also more robust with observation errors. Compared to the traditional ensemble smoother method, DNNs show stronger performance in capturing the nonlinear relationship between permeability and stream hydrograph to accurately estimate permeability. Our study sheds new light on the value of the emerging deep learning methods in assisting integrated watershed modeling by improving parameter estimation, which will eventually reduce the uncertainty in predictive watershed models.

54 ENVIRONMENTAL SCIENCES↗

Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq data

Single-cell RNA-sequencing (scRNA-seq) offers unparalleled insight into the transcriptional programs of different cellular states by measuring the transcriptome of thousands of individual cells. An emerging problem in the analysis of scRNA-seq is the inference of transcriptional gene regulatory networks and a number of methods with different learning frameworks have been developed to address this problem. Here, we present an expanded benchmarking study of eleven recent network inference methods on seven published scRNA-seq datasets in human, mouse, and yeast considering different types of gold standard networks and evaluation metrics. We evaluate methods based on their computing requirements as well as on their ability to recover the network structure. We find that, while most methods have a modest recovery of experimentally derived interactions based on global metrics such as Area Under the Precision Recall curve, methods are able to capture targets of regulators that are relevant to the system under study. Among the top performing methods that use only expression were SCENIC, PIDC, MERLIN or Correlation. Addition of prior biological knowledge and the estimation of transcription factor activities resulted in the best overall performance with the Inferelator and MERLIN methods that use prior knowledge outperforming methods that use expression alone. We found that imputation for network inference did not improve network inference accuracy and could be detrimental. Comparisons of inferred networks for comparable bulk conditions showed that the networks inferred from scRNA-seq datasets are often better or at par with the networks inferred from bulk datasets. Our analysis should be beneficial in selecting methods for network inference. At the same time, this highlights the need for improved methods and better gold standards for regulatory network inference from scRNAseq datasets.

59 BASIC BIOLOGICAL SCIENCES↗

Flow over an espresso cup: inferring 3-D velocity and pressure fields from tomographic background oriented Schlieren via physics-informed neural networks

Tomographic background oriented Schlieren (Tomo-BOS) imaging measures density or temperature fields in three dimensions using multiple camera BOS projections, and is particularly useful for instantaneous flow visualizations of complex fluid dynamics problems. We propose a new method based on physics-informed neural networks (PINNs) to infer the full continuous three-dimensional (3-D) velocity and pressure fields from snapshots of 3-D temperature fields obtained by Tomo-BOS imaging. The PINNs seamlessly integrate the underlying physics of the observed fluid flow and the visualization data, hence enabling the inference of latent quantities using limited experimental data. In this hidden fluid mechanics paradigm, we train the neural network by minimizing a loss function composed of a data mismatch term and residual terms associated with the coupled Navier–Stokes and heat transfer equations. We first quantify the accuracy of the proposed method based on a two-dimensional synthetic data set for buoyancy-driven flow, and subsequently apply it to the Tomo-BOS data set, where we are able to infer the instantaneous velocity and pressure fields of the flow over an espresso cup based only on the temperature field provided by the Tomo-BOS imaging. Moreover, we conduct an independent PIV experiment to validate the PINN inference for the unsteady velocity field at a centre plane. To explain the observed flow physics, we also perform systematic PINN simulations at different Reynolds and Richardson numbers and quantify the variations in velocity and pressure fields. Furthermore, the results in this paper indicate that the proposed deep learning technique can become a promising direction in experimental fluid mechanics.

97 MATHEMATICS AND COMPUTING↗

Nonequilibrium statistical mechanics and optimal prediction of partially-observed complex systems

Abstract Only a subset of degrees of freedom are typically accessible or measurable in real-world systems. As a consequence, the proper setting for empirical modeling is that of partially-observed systems. Notably, data-driven models consistently outperform physics-based models for systems with few observable degrees of freedom; e.g. hydrological systems. Here, we provide an operator-theoretic explanation for this empirical success. To predict a partially-observed system’s future behavior with physics-based models, the missing degrees of freedom must be explicitly accounted for using data assimilation and model parametrization. Data-driven models, in contrast, employ delay-coordinate embeddings and their evolution under the Koopman operator to implicitly model the effects of the missing degrees of freedom. We describe in detail the statistical physics of partial observations underlying data-driven models using novel maximum entropy and maximum caliber measures. The resulting nonequilibrium Wiener projections applied to the Mori–Zwanzig formalism reveal how data-driven models may converge to the true dynamics of the observable degrees of freedom. Additionally, this framework shows how data-driven models infer the effects of unobserved degrees of freedom implicitly, in much the same way that physics models infer the effects explicitly. This provides a unified implicit-explicit modeling framework for predicting partially-observed systems, with hybrid physics-informed machine learning methods combining both implicit and explicit aspects.

97 MATHEMATICS AND COMPUTING↗

Data-Driven Radiative Hydrodynamic Modeling of the 2014 March 29 X1.0 Solar Flare

Spectroscopic observations of solar flares provide critical diagnostics of the physical conditions in the flaring atmosphere. Some key features in observed spectra have not yet been accounted for in existing flare models. Here we report a data-driven simulation of the well-observed X1.0 flare on 2014 March 29 that can reconcile some well-known spectral discrepancies. We analyzed spectra of the flaring region from the Interface Region Imaging Spectrograph (IRIS) in Mg II hk, the Interferometric BIdimensional Spectropolarimeter at the Dunn Solar Telescope (DSTIBIS) in H(alpha) 6563A and Ca II 8542A, and the Reuven Ramaty High Energy Solar Spectroscope Imager (RHESSI) in hard X-rays. We constructed a multithreaded flare loop model and used the electron flux inferred from RHESSI data as the input to the radiative hydrodynamic code RADYN to simulate the atmospheric response. We then synthesized various chromospheric emission lines and compared them with the IRIS and IBIS observations. In general, the synthetic intensities agree with the observed ones, especially near the northern footpoint of the flare. The simulated Mg II line profile has narrower wings than the observed one. This discrepancy can be reduced by using a higher microturbulent velocity (27 km/s) in a narrow chromospheric layer. In addition, we found that an increase of electron density in the upper chromosphere within a narrow height range of approx. 800 km below the transition region can turn the simulated Mg II line core into emission and thus reproduce the single peaked profile, which is a common feature in all IRIS flares.

Da Costa, Fatima Rubio↗

Reconciling the MOLA, TES, and Neutron Observations of the North Polar CO2 Mass Budget on Mars

There are now three independent observations of the CO2 polar cap mass budget of Mars' north polar cap. The first is based elevation changes detected by the Mars Orbiter Laser Altimeter (MOLA) on the Mars Global Surveyor (MGS). The second is based on MGS Thermal Emission Spectrometer (TES) broadband observations of the solar and infrared radiation fields at the top of the atmosphere. The third is based on neutron counts measured by the neutron spectrometer (NS) on Odyssey. If one assumes a cap density of 910 kg/cu m, then the peak mass loading poleward of 85 N inferred from the MOLA data is approx. 1090 kg/sq m, which compares to approx. 1150 kg/sq m inferred from TES for the same region, and 700 kg/sq m from the NS data. TES and MOLA are in good agreement, but are about 60% higher than the NS data. Is there a way to reconcile these discrepancies?

Haberle, Robert M.↗

Role of the interfacial thermal barrier in the effective thermal diffusivity/conductivity of SiC-fiber-reinforced reaction-bonded silicon nitride

Experimental thermal diffusivity data transverse to the fiber direction for composites composed of a reaction bonded silicon nitride matrix reinforced with uniaxially aligned carbon-coated silicon carbide fibers indicate the existence of a significant thermal barrier at the matrix-fiber interface. Calculations of the interfacial thermal conductances indicate that at 300 C and 1-atm N2, more than 90 percent of the heat conduction across the interface occurs by gaseous conduction. Good agreement is obtained between thermal conductance values for the oxidized composite at 1 atm calculated from the thermal conductivity of the N2 gas and those inferred from the data for the effective composite thermal conductivity.

Bhatt, Hemanshu↗

Comparability of Liquid Chromatography Tandem Mass Spectrometry Analysis of Dissolved Organic Matter across Laboratories

Non-targeted liquid chromatography tandem highresolution mass spectrometry (LC−MS/MS) is increasingly applied for the structure-resolved chemical analysis of dissolved organic matter (DOM). With new developments in MS instrumentation and analysis software, the approach has gained substantial momentum over the past decade. However, achieving high-quality analytical data that is reproducible and comparable across laboratories can be a bottleneck in non-targeted metabolomics and organic matter chemical analysis, especially for data reuse in repository-scale analyses. Understanding the capabilities as well as challenges of comparing LC−MS/MS data from different laboratories is necessary for inferring global trends from public data sets. To illuminate instrumentation factors that drive differences and variability, we used a standardized data analysis pipeline, including classical (CMN) and featurebased molecular networking (FBMN), to analyze data from a ring trial by 24 laboratories on identical sample sets of algal and DOM extracts that were mixed in predefined concentrations and spiked with standards. Our results showed that data sets from similar mass spectrometer types with unified instrument parameters were qualitatively comparable, resolving the same general trends and shared mass spectral features. Interlaboratory comparability was best for high-intensity features, while low-intensity features showed greater detection variability. Our analysis also highlights challenges when comparing data from instruments with different acquisition rates or operating with less standardized methods. Lastly, we provide recommendations for data integration, public data sharing, standardization, and best practices for standardized LC−MS/MS data acquisition, which will be critical for long-term time series and intercomparability of DOM chemical analyses.

DOM↗

Non-intrusive data-driven model reduction for differential–algebraic equations derived from lifting transformations

In this paper we present a non-intrusive data-driven approach for model reduction of nonlinear systems. The approach considers the particular case of nonlinear partial differential equations (PDEs) that form systems of partial differential–algebraic equations (PDAEs) when lifted to polynomial form. Such systems arise, for example, when the governing equations include Arrhenius reaction terms (e.g., in reacting flow models) and thermodynamic terms (e.g., the Helmholtz free energy terms in a phase-field solidification model). Using the known structured form of the lifted algebraic equations, the approach computes the reduced operators for the algebraic equations explicitly, using straightforward linear algebra operations on the basis matrices. The reduced operators for the differential equations are inferred from lifted snapshot data using operator inference, which solves a linear least squares regression problem. The approach is illustrated for the nonlinear model of solidification of a pure material. The lifting transformations reformulate the solidification PDEs as a system of PDAEs that have cubic structure. The operators of the lifted system for this solidification example have affine dependence on key process parameters, permitting us to learn a parametric reduced model with operator inference. Numerical experiments show the effectiveness of the resulting reduced models in capturing key aspects of the solidification dynamics.

42 ENGINEERING↗

Global Seasonal Climatologies of Ocean Chlorophyll: Blending In situ and Satellite Data for the CZCS Era

The historical archives of in situ (National Oceanographic Data Center) and satellite (Coastal Zone Color Scanner) chlorophyll data were combined using the blended analysis method of Reynolds [1988] in an attempt to construct an improved climatological seasonal representation of global chlorophyll distributions. The results of the blended analysis differed dramatically from the CZCS representation: global chlorophyll estimates increased 8-35% in the blended analysis depending upon season. Regional differences were even larger, up to 140% in the equatorial Indian Ocean in summer (during the southwest monsoon). Tropical Pacific chlorophyll values increased 25-41%. The results suggested that the CZCS generally underestimates chlorophyll. Regional and seasonal differences in the blended analysis were sufficiently large as to produce a different representation of global chlorophyll distributions than otherwise inferred from CZCS data alone. Analyses of primary production and biogeochemical cycles may be substantially impacted by these results.

Gregg, Watson W.↗

Geostatistical evaluation of satellite radar altimetry for high-resolution mapping of Lambert Glacier, Antarctica

The potential of satellite radar altimetry for high-resolution mapping of Antarctic ice streams is evaluated, using retracked and slope-corrected data from the Lambert Glacier and Amery Ice Shelf area, East Antarctica, acquired by Geosat during the Exact Repeat Mission (ERM), 1986-89. The map area includes lower Lambert Glacier north of 72.18 deg S, the southern Amery Ice Shelf, and the grounded inland ice sheet on both sides. The Geosat ERM altimetry is found to provide substantially more complete coverage than the 1978 Seasat altimetry, due to improved tracking. Variogram methods are used to estimate the noise levels in the data as a function of position throughout the map area. The spatial structure in the data is quantified by constructing experimental variograms using altimetry from the area of the grounding zone of Lambert Glacier, which is the area chiefly of interest in this topographically complex region. Kriging is employed to invert the along-track height measurements onto a fine-scale 3 km grid. The unsmoothed along-track Geosat ERM altimetry yields spatially continuous maps showing the main topographic features of lower Lambert Glacier, upper Amery Ice Shelf and the adjacent inland ice sheet. The probable position of the grounding line of Lambert Glacier is identified from a break in slope at the grounded ice/floating ice transition. The approximate standard error of the kriged map is inferred from the data noise levels.

Herzfeld, Ute C.↗

Conservative force model performance for TOPEX/Poseidon precision orbit determination

The TOPEX/Poseidon spacecraft was launched on August 10, 1992 to study the Earth's oceans. To achieve maximum benefit from the altimetric data collected, mission requirements dictate that TOPEX/Poseidon's orbit must be computed at an unprecedented level of accuracy. In order to satisfy these requirements, a model which accounts for the satellite's complex geometry, attitude, and surface properties has been developed. This `box-wing' representation treats the spacecraft as the combination of flat plates arranged in the shape of a box and a connecetd solar array. The nonconservative forces acting on each of the eight surfaces are computed independently, yielding vector accelerations which are summed to compute the total aggregate effect on the satellite center-of-mass. Parameters associated with each flat plate were derived from a finite element analysis of the spacecraft. Certain parameters can be inferred from tracking data and have been adjusted to obtain a better representation of the satellite acceleration history. Changes in the nominal mission profile and the presence of an `anomalistic' force have complicated this tuning process. Model performance, parameter sensitivities, and the `anomalistic' force will be discussed.

Marshall, J. Andrew↗