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At least 415 records · Page 23
All sourcesNASA NTRSDOE OSTI
NASA NTRS2002

Cyanobacterial Community Structure In Lithifying Mats of A Yellowstone Hotspring-Implications for Precambrian Stromatolite Biocomplexity

Denaturing Gradient Gel Electrophoresis (DGGE) of partial 16S rRNA gene sequences was used to investigate the molecular biodiversity of cyanobacterial communities inhabiting various lithified morpho-structures in two hotsprings of Yellowstone National Park. These morpho-structures - flat-topped columns, columnar cones, and ridged cones - resemble ancient stromatolites, which are possibly biogenic in origin. The top, middle and bottom sections of these lithified morpho-structures, as well as surrounding non-lithified mats were analyzed to determine the vertical and spatial distribution of cyanobacterial communities. Results from DGGE indicate that the cyanobacterial community composition of lithified morpho-structures (flat-topped columns, columnar cones, and ridged cones) were largely similar in vertical distribution as well as among the morpho-structures being studied. Preliminary results indicate that the cyanobacterial communities in these lithified morpho-structures were significantly different from communities in surrounding non-lithified mats. These results provide additional support to the theory that certain Phormidium/Leptolyngbya species are involved in the morphogenesis of lithifying morpho-structures in hotsprings and may have played a role in the formation of ancient stromatolites.

Lau, Evan↗
NASA NTRS1988

Does iron inhibit cryptoendolithic microbial communities?

Photosynthetic activity of three cryptoendolithic microbial communities was studied under controlled conditions in the laboratory. In two of these communities, the dominant organisms were lichens, collected from Linnaeus Terrace and from Battleship Promontory. The third community, dominated by cyanobacteria, was collected from Battleship Promontory. Both sites are in the ice-free valleys of southern Victoria Land. Previous efforts have shown how physical conditions can influence metabolic activity in endolithic communities (Kappen and Friedmann 1983; Kappen, Friedmann, and Garty 1981; Vestal, Federle, and Friedmann 1984). Biological activity can also be strongly influenced by the chemical environment. Inorganic nutrients such as nitrate, ammonia, and phosphate are often limiting factors, so their effects on photosynthetic carbon-14 bicarbonate incorporation were investigated. Iron and manganese are two metals present in Linnaeus Terrace and Battleship Promontory sandstones, and their effects on photosynthesis were also studied. The results may add to our understanding of biogeochemical interactions within this unique microbial community.

Non-NASA Center↗
NASA NTRS2004

Grid Technology as a Cyberinfrastructure for Delivering High-End Services to the Earth and Space Science Community

Grid technology consists of middleware that permits distributed computations, data and sensors to be seamlessly integrated into a secure, single-sign-on processing environment. In &is environment, a user has to identify and authenticate himself once to the grid middleware, and then can utilize any of the distributed resources to which he has been,panted access. Grid technology allows resources that exist in enterprises that are under different administrative control to be securely integrated into a single processing environment The grid community has adopted commercial web services technology as a means for implementing persistent, re-usable grid services that sit on top of the basic distributed processing environment that grids provide. These grid services can then form building blocks for even more complex grid services. Each grid service is characterized using the Web Service Description Language, which provides a description of the interface and how other applications can access it. The emerging Semantic grid work seeks to associates sufficient semantic information with each grid service such that applications wii1 he able to automatically select, compose and if necessary substitute available equivalent services in order to assemble collections of services that are most appropriate for a particular application. Grid technology has been used to provide limited support to various Earth and space science applications. Looking to the future, this emerging grid service technology can provide a cyberinfrastructures for both the Earth and space science communities. Groups within these communities could transform those applications that have community-wide applicability into persistent grid services that are made widely available to their respective communities. In concert with grid-enabled data archives, users could easily create complex workflows that extract desired data from one or more archives and process it though an appropriate set of widely distributed grid services discovered using semantic grid technology. As required, high-end computational resources could be drawn from available grid resource pools. Using grid technology, this confluence of data, services and computational resources could easily be harnessed to transform data from many different sources into a desired product that is delivered to a user's workstation or to a web portal though which it could be accessed by its intended audience.

Hinke, Thomas H.↗
NASA NTRS2004

Microbial astronauts: assembling microbial communities for advanced life support systems

Extension of human habitation into space requires that humans carry with them many of the microorganisms with which they coexist on Earth. The ubiquity of microorganisms in close association with all living things and biogeochemical processes on Earth predicates that they must also play a critical role in maintaining the viability of human life in space. Even though bacterial populations exist as locally adapted ecotypes, the abundance of individuals in microbial species is so large that dispersal is unlikely to be limited by geographical barriers on Earth (i.e., for most environments "everything is everywhere" given enough time). This will not be true for microbial communities in space where local species richness will be relatively low because of sterilization protocols prior to launch and physical barriers between Earth and spacecraft after launch. Although community diversity will be sufficient to sustain ecosystem function at the onset, richness and evenness may decline over time such that biological systems either lose functional potential (e.g., bioreactors may fail to reduce BOD or nitrogen load) or become susceptible to invasion by human-associated microorganisms (pathogens) over time. Research at the John F. Kennedy Space Center has evaluated fundamental properties of microbial diversity and community assembly in prototype bioregenerative systems for NASA Advanced Life Support. Successional trends related to increased niche specialization, including an apparent increase in the proportion of nonculturable types of organisms, have been consistently observed. In addition, the stability of the microbial communities, as defined by their resistance to invasion by human-associated microorganisms, has been correlated to their diversity. Overall, these results reflect the significant challenges ahead for the assembly of stable, functional communities using gnotobiotic approaches, and the need to better define the basic biological principles that define ecosystem processes in the space environment. Copyright 2004 Springer-Verlag.

Review↗
NASA NTRS2005

Effects of artificial defoliation of pines on the structure and physiology of the soil fungal community of a mixed pine-spruce forest

Loss of photosynthetic area can affect soil microbial communities by altering the availability of fixed carbon. We used denaturing gradient gel electrophoresis (DGGE) and Biolog filamentous-fungus plates to determine the effects of artificial defoliation of pines in a mixed pine-spruce forest on the composition of the fungal community in a forest soil. As measured by DGGE, two fungal species were affected significantly by the defoliation of pines (P < 0.001); the frequency of members of the ectomycorrhizal fungus genus Cenococcum decreased significantly, while the frequency of organisms of an unidentified soil fungus increased. The decrease in the amount of Cenococcum organisms may have occurred because of the formation of extensive hyphal networks by species of this genus, which require more of the carbon fixed by their host, or because this fungus is dependent upon quantitative differences in spruce root exudates. The defoliation of pines did not affect the overall composition of the soil fungal community or fungal-species richness (number of species per core). Biolog filamentous-fungus plate assays indicated a significant increase (P < 0.001) in the number of carbon substrates utilized by the soil fungi and the rate at which these substrates were used, which could indicate an increase in fungal-species richness. Thus, either small changes in the soil fungal community give rise to significant increases in physiological capabilities or PCR bias limits the reliability of the DGGE results. These data indicate that combined genetic and physiological assessments of the soil fungal community are needed to accurately assess the effect of disturbance on indigenous microbial systems.

Pinus/growth & development/physiology↗
NASA NTRS2006

Software Reuse Within the Earth Science Community

Scientific missions in the Earth sciences frequently require cost-effective, highly reliable, and easy-to-use software, which can be a challenge for software developers to provide. The NASA Earth Science Enterprise (ESE) spends a significant amount of resources developing software components and other software development artifacts that may also be of value if reused in other projects requiring similar functionality. In general, software reuse is often defined as utilizing existing software artifacts. Software reuse can improve productivity and quality while decreasing the cost of software development, as documented by case studies in the literature. Since large software systems are often the results of the integration of many smaller and sometimes reusable components, ensuring reusability of such software components becomes a necessity. Indeed, designing software components with reusability as a requirement can increase the software reuse potential within a community such as the NASA ESE community. The NASA Earth Science Data Systems (ESDS) Software Reuse Working Group is chartered to oversee the development of a process that will maximize the reuse potential of existing software components while recommending strategies for maximizing the reusability potential of yet-to-be-designed components. As part of this work, two surveys of the Earth science community were conducted. The first was performed in 2004 and distributed among government employees and contractors. A follow-up survey was performed in 2005 and distributed among a wider community, to include members of industry and academia. The surveys were designed to collect information on subjects such as the current software reuse practices of Earth science software developers, why they choose to reuse software, and what perceived barriers prevent them from reusing software. In this paper, we compare the results of these surveys, summarize the observed trends, and discuss the findings. The results are very similar, with the second, larger survey confirming the basic results of the first, smaller survey. The results suggest that reuse of ESE software can drive down the cost and time of system development, increase flexibility and responsiveness of these systems to new technologies and requirements, and increase effective and accountable community participation.

Marshall, James J.↗
NASA NTRS2009

Community Modeling Program for Space Weather: A CCMC Perspective

A community modeling program, which provides a forum for exchange and integration between modelers, has excellent potential for furthering our Space Weather modeling and forecasting capabilities. The design of such a program is of great importance to its success. In this presentation, we will argue that the most effective community modeling program should be focused on Space Weather-related objectives, and that it should be open and inclusive. The tremendous successes of prior community research activities further suggest that the most effective implementation of a new community modeling program should be based on community leadership, rather than on domination by individual institutions or centers. This presentation will provide an experience-based justification for these conclusions.

Hesse, Michael↗
NASA NTRS2011

Enabling the Capture and Sharing of NASA Technical Expertise Through Communities of Practice

Historically, engineers at the National Aeronautics and Space Administration (NASA) had few opportunities or incentives to share their technical expertise across the Agency. Its center- and project- focused culture often meant that knowledge never left organizational and geographic boundaries. With increasingly complex missions, the closeout of the Shuttle Program, and a new generation entering the workforce, developing a knowledge sharing culture became critical. To address this need, the Office of the Chief Engineer established communities of practice on the NASA Engineering Network. These communities were strategically aligned with NASA's core competencies in such disciplines as avionics, flight mechanics, life support, propulsion, structures, loads and dynamics, human factors, and guidance, navigation, and control. This paper describes the process used to identify and develop communities, from establishing simple websites that compiled discipline-specific resources to fostering a knowledge-sharing environment through collaborative and interactive technologies. It includes qualitative evidence of improved availability and transfer of knowledge. It focuses on pivotal capabilities that increased knowledge exchange such as a custom-made Ask An Expert system, community contact lists, publication of key resources, and submission forms that allowed any user to propose content for the sites. It discusses the peer relationships that developed through the communities and the leadership and infrastructure that made them possible.

Topousis, Daria E.↗
NASA NTRS2016

Safeguarding the Health of the NASA Astronaut Community: the Need for Expanded Medical Monitoring for Former NASA Astronauts Under the Astronaut Occupational Health Program

The astronaut community is unique, and may be disproportionately exposed to occupational hazards not commonly seen in other communities. The extent to which the demands of the astronaut occupation and exposure to spaceflight-related hazards affect the health of the astronaut population over the life course is not completely known. Provision of health screening services to active and former astronauts ensures individual, mission, and community health and safety. Currently, the NASA Johnson Space Center (JSC) Flight Medicine Clinic (FMC) provides extensive medical monitoring to active astronauts throughout their careers. Upon retirement, astronauts may voluntarily return to the JSC FMC for an annual preventive exam. However, current retiree monitoring includes only selected screening tests, representing an opportunity for augmentation. The potential latent health effects of spaceflight demand an expanded framework of testing for former astronauts. The need is two-fold: screening tests widely recommended for other aging communities are necessary for astronauts to rule out conditions resulting from the natural aging process (e.g., colonoscopy, mammography), as opposed to conditions resulting directly from the astronaut occupation; and increased breadth of monitoring services will improve the understanding of occupational health risks and longitudinal health of the astronaut community, past, present, and future. To meet this need, NASA has begun an extensive exploration of the overall approach, cost, and policy implications of expanding existing medical monitoring under the Astronaut Occupational Health program for former NASA astronauts.

Rossi, Meredith↗
NASA NTRS2019

Statistical Modeling of Quiet Sonic Boom Community Response Survey Data

The existing ban on commercial supersonic flight overland is largely due to the effects of loud and startling sonic booms on communities. NASA is planning a nationwide campaign of community response surveys using the experimental X-59 Quiet SuperSonic Technology (X-59 QueSST) aircraft to understand how communities perceive the sounds of quiet supersonic flight. The X-59 community response survey data will be presented to noise regulators, who are considering replacing the ban with a noise-based certification limit so quiet supersonic vehicles can fly over land. In this document, we use pilot community response survey data to explore and assess multiple approaches to statistically model the dose-response relationship between single-event sonic boom sound exposure and human annoyance. The models have two primary functions—estimating two types of quantities that support setting regulations and experimental design of future surveys.

Jasme Lee↗
NASA NTRS2020

Environmental factors driving spatial heterogeneity in desert halophile microbial communities

Spatial heterogeneity in microbial communities is observed in all-natural ecosystems and can stem from both adaptations to local environmental conditions as well as stochastic processes. Extremophile microbial communities inhabiting evaporitic halite nodules (salt rocks) in the Atacama Desert, Chile, are a good model ecosystem for investigating factors leading to microbiome heterogeneity, due to their diverse taxonomic composition and the spatial segregation of individual nodules. We investigated the abiotic factors governing microbiome composition across different spatial scales, allowing for insight into the factors that govern halite colonization from regional desert-wide scales to micro-scales within individual nodules. We found that water availability and community drift account for microbiome assembly differently at different distance scales, with higher rates of cell dispersion at the smaller scales resulting in a more homogenous composition. This trend likely applies to other endoliths, and to non desert communities, where dispersion between communities is limited. At the intra-nodule scales, a light availability gradient was most important in determining the distribution of microbial taxa despite intermixing by water displacement via capillary action.

microbiome extremophile, desert, heterogeneity, Me↗
NASA NTRS2020

Beyond Ecosystem Modeling: A Roadmap to Community Cyberinfrastructure for Ecological Data-Model Integration

In an era of rapid global change, our ability to understand and predict Earth's natural systems is lagging behind our ability to monitor and measure changes in the biosphere. Bottlenecks to informing models with observations have reduced our capacity to fully exploit the growing volume and variety of available data. Here, we take a critical look at the information infrastructure that connects ecosystem modeling and measurement efforts, and propose a roadmap to community cyberinfrastructure development that can reduce the divisions between empirical research and modeling and accelerate the pace of discovery. A new era of data‐model integration requires investment in accessible, scalable, and transparent tools that integrate the expertise of the whole community, including both modelers and empiricists. This roadmap focuses on five key opportunities for community tools: the underlying foundations of community cyberinfrastructure; data ingest; calibration of models to data; model‐data benchmarking; and data assimilation and ecological forecasting. This community‐driven approach is a key to meeting the pressing needs of science and society in the 21st century.

Istem Fer↗
NASA NTRS2022

Adaptations of Endolithic Communities to Abrupt Environmental Changes in A Hyper-Arid Desert

The adaptation mechanisms of microbial communities to natural perturbations remain relatively unexplored, particularly in extreme environments. The extremophilic communities of halite (NaCl) nodules from the hyper-arid core of the Atacama Desert are self-sustained and represent a unique opportunity to study functional adaptations and community dynamics with changing environmental conditions. We transplanted halite nodules to different sites in the desert and investigated how their taxonomic, cellular, and biochemical changes correlated with water availability, using environmental data modeling and metagenomic analyses. Salt-in strategists, mainly represented by haloarchaea, significantly increased in relative abundance at sites characterized by extreme dryness, multiple wet/dry cycles, and colder conditions. The functional analysis of metagenome-assembled genomes (MAGs) revealed site-specific enrichments in archaeal MAGs encoding for the uptake of various compatible solutes and for glycerol utilization. These findings suggest that opportunistic salt-in strategists took over the halite communities at the driest sites. They most likely benefited from metabolites newly released in the environment by the death of microorganisms least adapted to the new conditions. The observed changes were consistent with the need to maximize cellular bioenergetics when confronted with lower water availability and higher salinity, providing valuable information on microbial community adaptations and resilience to climate change.

Atacama↗
NASA NTRSDate not supplied

Building access and community standards for opacity data at the onset of next-generation atmosphere observations

The characterization of a diverse set of exoplanet atmosphere observations, ranging from hot gas giants to small temperate rocky worlds, will be one of the legacies of upcoming facilities such as the James Webb Space Telescope (JWST). Our understanding and interpretation of such observations will hinge on our ability to link observations with atmospheric theoretical studies that critically rely on fundamental molecular and atomic opacities. Computing such opacities is a highly non-trivial and inaccessible process which requires several terabytes of available disk space, hours of CPU time per pressure-temperature combination, and requires users to carefully aggregate line lists data from various sources, which limits access and intercomparison of opacity data in the exoplanet community. Here we present MAESTRO (Molecules and Atoms in Exoplanet Science: Tools and Resources for Opacities) an opacity database that can be accessed by the community via a web interface and python API. MAESTRO was built with community input to create a version-controlled opacity database that is easily queryable, includes informative metadata to ensure reproducibility, and exports relevant citations for inclusion in publications. Scheduled for community release in 2022, MAESTRO will prove to be an invaluable community resource in the era of JWST and beyond.

Natasha Batalha↗
NASA NTRSDate not supplied

Localizing Earth Science: The NASA DEVELOP Model of Community Science & Engagement

NASA’s DEVELOP Program conducts rapid feasibility studies that apply Earth observations to address community priorities and needs and enable informed decision making. Part of NASA’s Applied Sciences’ Capacity Building Program, DEVELOP builds skills in both participants (students, recent graduates, and early/transitioning career professionals) who conduct projects on small teams, and partner organizations (state and local governments, federal agencies, non-profit and for-profit organizations, and international organizations) that work closely with DEVELOP to design the project. While only a subset of DEVELOP partner organizations are local municipalities or community-led non-profits, the DEVELOP model is an effective engagement tool and often used by NASA as an introduction for communities to engage in Earth science research and familiarization with satellite remote sensing. This presentation will highlight the DEVELOP model of co-production and community collaboration, lessons learned in partnering with local communities, and evaluation activities that look at the program’s reach and efforts.

Robert Cecil Byles↗
NASA NTRS2023

Sharks Associated With A Large Sand Shoal Complex: Community Insights From Longline and Acoustic Telemetry Surveys

Offshore sand shoals are a coveted sand source for coastal restoration projects and as sites for wind energy development. Shoals often support unique fish assemblages but their habitat value to sharks is largely unknown due to the high mobility of most species in the open ocean. This study pairs multi-year longline and acoustic telemetry surveys to reveal depth-related and seasonal patterns in a shark community associated with the largest sand shoal complex in east Florida, USA. Monthly longline sampling from 2012–2017 yielded 2,595 sharks from 16 species with Atlantic sharpnose (Rhizoprionodon terraenovae), blacknose (Carcharhinus acronotus), and blacktip (C. limbatus) sharks being the most abundant species. A contemporaneous acoustic telemetry array detected 567 sharks from 16 species (14 in common with longlines) tagged locally and by researchers elsewhere along the US East Coast and Bahamas. PERMANOVA modeling of both datasets indicate that the shark species assemblage differed more across seasons than water depth although both factors were important. Moreover, the shark assemblage detected at an active sand dredge site was similar to that at nearby undisturbed sites. Water temperature, water clarity, and distance from shore were habitat factors that most strongly correlated to community composition. Both sampling approaches documented similar single-species and community trends but longlines underestimated the shark nursery value of the region while telemetry-based community assessments are inherently biased by the number of species under active study. Overall, this study confirms that sharks can be an important component of sand shoal fish communities but suggests that deeper water immediately adjacent to shoals (as opposed to shallow shoal ridges) is more valuable to some species. Potential impacts to these nearby habitats should be considered when planning for sand extraction and offshore wind infrastructure.

Shark Management↗
NASA NTRS2023

Accounting for Herbaceous Communities in Process-Based Models Will Advance Our Understanding of “Grassy” Ecosystems

Grassland and other herbaceous communities cover significant portions of Earth's terrestrial surface and provide many critical services, such as carbon sequestration, wildlife habitat, and food production. Forecasts of global change impacts on these services will require predictive tools, such as process-based dynamic vegetation models. Yet, model representation of herbaceous communities and ecosystems lags substantially behind that of tree communities and forests. The limited representation of herbaceous communities within models arises from two important knowledge gaps: first, our empirical understanding of the principles governing herbaceous vegetation dynamics is either incomplete or does not provide mechanistic information necessary to drive herbaceous community processes with models; second, current model structure and parameterization of grass and other herbaceous plant functional types limits the ability of models to predict outcomes of competition and growth for herbaceous vegetation. In this review, we provide direction for addressing these gaps by: (1) presenting a brief history of how vegetation dynamics have been developed and incorporated into earth system models, (2) reporting on a model simulation activity to evaluate current model capability to represent herbaceous vegetation dynamics and ecosystem function, and (3) detailing several ecological properties and phenomena that should be a focus for both empiricists and modelers to improve representation of herbaceous vegetation in models. Together, empiricists and modelers can improve representation of herbaceous ecosystem processes within models. In so doing, we will greatly enhance our ability to forecast future states of the earth system, which is of high importance given the rapid rate of environmental change on our planet.

biogeochemistry↗
NASA NTRSDate not supplied

The NASA DEVELOP Model of Community Science & Engagement: Localizing Earth Science Information

The NASA DEVELOP Program conducts 10 week feasibility studies that apply Earth observation data to address community priorities and support informed decision making. Part of NASA’s Earth Action Capacity Building Program, DEVELOP builds skills in both participants ( recent graduates, and early/transitioning career professionals), who work on small interdisciplinary project teams, and partner organizations (state and local governments, federal agencies, non profit and for profit organizations, universities, and international organizations) that work closely with DEVELOP to design the project. Projects address a wide variety of environmental issues, such as disaster risk and resilience, air pollution, and the impact of urban development, with a growing number of projects exploring how satellite data can help inform decision making around environmental injustices. A subset of DEVELOP partner organizations are local municipalities or community led non profits, with the co production model serving as an effective engagement tool and an introduction for communities to engage in Earth science research and become familiar with satellite remote sensing. This presentation will highlight the DEVELOP co production model, community project use cases, and lessons learned in partnering with local communities.

Michael Pazmino↗