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At least 415 records · Page 23

Reducing radiation dose for multi-phase contrast-enhanced dual energy renal CT: pilot study evaluating prior iterative reconstruction

Purpose: Prior iterative reconstruction (PIR) uses spatial information from one phase of enhancement to reduce image noise in other phases. We sought to determine if PIR could reduce radiation dose while preserving observer performance and CT number at multi-phase dual energy (DE) renal CT. Methods: CT projection data from multi-phase DE renal CT examinations were collected. Images corresponding to 40% radiation dose were reconstructed using validated noise insertion and PIR. Three genitourinary radiologists examined routine and 40% dose PIR images. Probability of malignancy was assessed [from 0 to 100] with malignancy assumed at probability ≥ 75. Observer performance was compared on a per patient and per lesion level. CT number accuracy was measured. Results: Twenty-three patients had 49 renal lesions (11 solid renal neoplasms). CT number was nearly identical between techniques (mean CT number difference: unenhanced 2 ± 2 HU; enhanced 4 ± 4 HU). AUC for malignancy was similar between multi-phase routine dose DE and lower dose PIR images [per patient: 0.950 vs. 0.916 (p = 0.356); per lesion: 0.931 vs. 0.884 (p = 0.304)]. Per patient sensitivity was also similar (78% routine dose vs. 82% lower dose [p ≥ 0.99]), as was specificity (91% routine dose vs. 93% lower dose PIR [p > 0.99]), with similar findings on a per lesion level. Subjective image quality was also similar (p = 0.34). Conclusions: Prior iterative reconstruction is a new reconstruction method for multi-phase CT examinations that promises to facilitate radiation dose reduction by over 50% for multi-phase DE renal CT exams without compromising CT number or observer performance.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Design and Simulation for Pre-amplifier of ITER Radial X-ray Camera

The radial X-ray camera, which is used to measure magnetohydrodynamic phenomenon and monitor edge localised mode events, is a key diagnostic system for physics studies in the international thermonuclear experimental reactor (ITER) tokamak. Considering the special requirements of physics measurements and spatial resolution, 144 detector channels are required. The board card of the pre-amplifier is designed to improve the integration, on which 16 signal channels have been integrated. In order to suppress the noise and improve the stability of the pre-amplifier, the target impedance analysis method is applied in the design of the power supply, the trans-impedance amplifier and a two-stage active low pass filter are applied in the design. Simulation with Cadence OrCAD and ANSYS SIwave has been adopted to optimize the characteristics of the pre-amplifier. A test of the pre-amplifier shows its good performance for ITER application. After optimization of the pre-amplifier, the band width is 270 kHz, the amplification is 10{sup 7} V/A, and the noise attenuation is − 30 dB, the noise of the pre-amplifier is reduced to 10 mV (noise of the power supply is included).

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Discrete Alfvén Eigenmodes in ITER Plasmas with Bootstrap Current

There is an important relationship between gradient of pressure and the bootstrap current. Due to the α (a gradient scale of pressure) is the essential condition to trap discrete Alfvén eigenmodes (α-induced Alfvén eigenmodes, namely αTAEs), here, we focus on the relationship between αTAEs and bootstrap current with a magnetohydrodynamic (MHD) simulation code and a gyrokinetic-MHD hybrid simulation code in two typical scenarios in ITER, and compare these typical scenarios with two ordinary scenarios about physical characteristics of discrete Alfvén eigenmodes. These discrete Alfvén eigenmodes are always lying in the region of high bootstrap current. However, they are not corresponding absolutely in pure radio frequency scenario (one of typical scenarios) because of large-α. Moreover, we illustrate the multiple branches of discrete Alfvén eigenmodes in those typical scenarios, and find high-order modes trapped by the lower potential well. Discrete Alfvén eigenmodes exist widely in ITER scenarios with bootstrap current. However, discrete Alfvén eigenmodes are quasi-marginally stable in MHD description and could be readily destabilized by energetic particles in hybrid simulation via wave-particle resonances.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Asynchronous Richardson iterations: theory and practice

We consider asynchronous versions of the first- and second-order Richardson methods for solving linear systems of equations. These methods depend on parameters whose values are chosen a priori. We explore the parameter values that can be proven to give convergence of the asynchronous methods. This is the first such analysis for asynchronous second-order methods. We find that for the first-order method, the optimal parameter value for the synchronous case also gives an asynchronously convergent method. For the second-order method, the parameter ranges for which we can prove asynchronous convergence do not contain the optimal parameter values for the synchronous iteration. In practice, however, the asynchronous second-order iterations may still converge using the optimal parameter values, or parameter values close to the optimal ones, despite this result. We explore this behavior with a multithreaded parallel implementation of the asynchronous methods.

97 MATHEMATICS AND COMPUTING↗

An iterative method for computing a symplectic SVD-like decomposition

In this paper, we present an effective iterative method for computing symplectic SVD-like decomposition for a 2n-by-m rectangular real matrix A. The main purpose here is a block-power iterative method with the ortho-symplectic SR decomposition in the normalization step. We compute an k-block symplectic SVD-like decomposition, namely A{sub k}=S{sub k}Σ{sub k}V{sub k}{sup T} where S{sub k}∈ℝ{sup 2n×2k} is symplectic and V{sub k}∈ℝ{sup m×2k} is orthogonal. For large matrices, we usually have to compute only part of eigenvalues. The main interest of the proposed method is to efficiently compute the desired number of ordered in magnitude eigenvalues of structured matrices.

97 MATHEMATICS AND COMPUTING↗

Fast iterative refinement method for mixed systems of integral and fractional integro-differential equations

The authors’ new method of iterative refinement has been successfully applied to the linear fractional Fredholm integro-differential equation. In this work, we adapt our method to obtain approximate analytical solutions for linear Volterra equations of both the first and the second kind of fractional type. A detailed convergence analysis is presented for each kind. The authors also apply their method to the challenging first kind linear Fredholm integral equation. Three different cases are considered to test the efficacy of our method. These include mixed systems of various forms of linear integral and fractional integro-differential equations. We compare our method with six well-established methods: Picard’s successive approximations, an accelerated form of the latter, the Adomian decomposition, the variational iteration, the homotopy perturbation and the homotopy analysis. The results show the versatility of the new method in solving a wide variety of equations, its high convergence speed and accuracy and its capability of directly dealing with equations of the first kind. We also prove that Picard’s method for linear equations is a special case of our method.

97 MATHEMATICS AND COMPUTING↗

Factorizations of hyperpower family of iterative methods via least squares approach

A new method for finding proper factorizations of the hyperpower family of iterative methods for computing generalized inverses is proposed. The method is based on numerical optimization of an appropriate least squares problem. An iterative method in a non-normalized form for finding the generalized outer inverses with prescribed range and null space of any given complex matrix is proposed and considered. Computational complexity and convergence of the method are studied. Several numerical experiments are also presented.

97 MATHEMATICS AND COMPUTING↗

Particulate Fuel Modeling of MC 2 -3 using Iterative Local Spatial Self-shielding Method

We report a new spatial self-shielding method for particulate fuels has been developed based on disadvantage factors and implemented in the MC 2 -3 code. This method named the iterative local spatial self-shielding (ILSS) method considers the shadowing effect of randomly distributed particles on spatial self-shielding in particles through a homogenized composition region added outside the particle of interest at the center. The self-shielded cross sections of the central particle are determined iteratively since they are used in determining the cross sections of the homogenized composition region. The ILSS method was verified for infinite stochastic medium problems of single and multiple types of particles, VHTR unit cell problems, and HTTR assembly problems. The verification test results show that the ILSS method accurately predicts the stochastic particle shadowing effect and reaction rates in particles, whereas the regular array model and the stochastic collision probability method underpredict the particle shadowing effect and overestimate reaction rates in particles.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Iterative redox activation promotes interfacial synergy in an Ag/Cu x O catalyst for oxygen reduction

In this study, an iterative electrochemical activation process is demonstrated to maximize the interface between Ag and Cu x O. Morphological reconstruction and phase transformation of Cu x O occurs through the iterative electrochemical redox reaction, as indicated by energy-dispersive spectroscopy and X-ray photoelectron spectroscopy. The activated Ag/Cu x O/C catalysts exhibits enhanced oxygen reduction reaction performance, with an onset potential of 0.86 V vs. the reversible hydrogen electrode, a Tafel slope of 46mV dec -1 , and a high stability as compared to Ag/C. A mechanistic study using density functional theory shows that the weakened binding energy of the OH intermediate, originating from the charge transfer from Ag to Cu x O, improves the ORR activity at the interface sites of the Ag/Cu x O electrocatalysts. Ag/Cu x O shows a higher limiting potential of 0.14V for interface sites than isolated Ag nanoparticles. The interfacial charge transfer between Ag and CuO is verified experimentally.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data

Gene-to-gene networks, such as Gene Regulatory Networks (GRN) and Predictive Expression Networks (PEN) capture relationships between genes and are beneficial for use in downstream biological analyses. There exists multiple network inference tools to produce these gene-to-gene networks from matrices of gene expression data. Random Forest-Leave One Out Prediction (RF-LOOP) is a method that has been shown to be efficient at producing these gene-to-gene networks, frequently known as GEne Network Inference with Ensemble of trees (GENIE3). Random Forest can be replaced in this process by iterative Random Forest (iRF), which performs variable selection and boosting. Here we validate that iterative Random Forest-Leave One Out Prediction (iRF-LOOP) produces higher quality networks than GENIE3 (RF-LOOP). We use both synthetic and empirical networks from the Dialogue for Reverse Engineering Assessment and Methods (DREAM) Challenges by Sage Bionetworks, as well as two additional empirical networks created from Arabidopsis thaliana and Populus trichocarpa expression data.

59 BASIC BIOLOGICAL SCIENCES↗

Design update of the ITER upper wide angle viewing system

One of the diagnostic systems being provided by the US is the Upper Wide Angle Viewing System (UWAVS) which provides real-time, simultaneous visible and infrared (IR) images of the ITER divertor regions via optical systems located in five upper ports. UWAVS is designed in three main sections: in-vessel, interspace and port cell assemblies. Each assembly utilizes multiple steering and relay mirrors to direct the in-vessel light out of the tokamak to the port cell camera sensors. The primary design challenge of the in-vessel assembly is maximizing performance of the overall system while surviving the severe electromagnetic and nuclear ITER environment. A first mirror material study was conducted and determined that single crystal molybdenum was the best choice for the first two mirrors in the optical train. A fail open, bellows actuated shutter with cross pivot flexure design was determined to be the most reliable mechanism to protect the first mirror. A geometrically representative glow discharge mirror cleaning system is being created and will be tested to maximize cleaning effectiveness while minimizing optical degradation of the molybdenum mirrors adjacent to the plasma. The shutter and first mirror assemblies were packaged and designed for replacement via remote handling methods to minimize radiation waste and cost associated with eventual component replacement. The preliminary optical and structural design provides a robust and reliable system while maximizing the field of view. The R&D efforts, the technical challenges and issues, and the design and analysis results are introduced.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

An iterative stochastic ensemble method for parameter estimation of subsurface flow models

Parameter estimation for subsurface flow models is an essential step for maximizing the value of numerical simulations for future prediction and the development of effective control strategies. We propose the iterative stochastic ensemble method (ISEM) as a general method for parameter estimation based on stochastic estimation of gradients using an ensemble of directional derivatives. ISEM eliminates the need for adjoint coding and deals with the numerical simulator as a blackbox. The proposed method employs directional derivatives within a Gauss–Newton iteration. The update equation in ISEM resembles the update step in ensemble Kalman filter, however the inverse of the output covariance matrix in ISEM is regularized using standard truncated singular value decomposition or Tikhonov regularization. We also investigate the performance of a set of shrinkage based covariance estimators within ISEM. The proposed method is successfully applied on several nonlinear parameter estimation problems for subsurface flow models. The efficiency of the proposed algorithm is demonstrated by the small size of utilized ensembles and in terms of error convergence rates.

97 MATHEMATICS AND COMPUTING↗

Hybrid preconditioning for iterative diagonalization of ill-conditioned generalized eigenvalue problems in electronic structure calculations

The iterative diagonalization of a sequence of large ill-conditioned generalized eigenvalue problems is a computational bottleneck in quantum mechanical methods employing a nonorthogonal basis for ab initio electronic structure calculations. We propose a hybrid preconditioning scheme to effectively combine global and locally accelerated preconditioners for rapid iterative diagonalization of such eigenvalue problems. In partition-of-unity finite-element (PUFE) pseudopotential density-functional calculations, employing a nonorthogonal basis, we show that the hybrid preconditioned block steepest descent method is a cost-effective eigensolver, outperforming current state-of-the-art global preconditioning schemes, and comparably efficient for the ill-conditioned generalized eigenvalue problems produced by PUFE as the locally optimal block preconditioned conjugate-gradient method for the well-conditioned standard eigenvalue problems produced by planewave methods.

74 ATOMIC AND MOLECULAR PHYSICS↗

A domain decomposition method of stochastic PDEs: An iterative solution techniques using a two-level scalable preconditioner

Recent advances in high performance computing systems and sensing technologies motivate computational simulations with extremely high resolution models with capabilities to quantify uncertainties for credible numerical predictions. A two-level domain decomposition method is reported in this investigation to devise a linear solver for the large-scale system in the Galerkin spectral stochastic finite element method (SSFEM). In particular, a two-level scalable preconditioner is introduced in order to iteratively solve the large-scale linear system in the intrusive SSFEM using an iterative substructuring based domain decomposition solver. The implementation of the algorithm involves solving a local problem on each subdomain that constructs the local part of the preconditioner and a coarse problem that propagates information globally among the subdomains. The numerical and parallel scalabilities of the two-level preconditioner are contrasted with the previously developed one-level preconditioner for two-dimensional flow through porous media and elasticity problems with spatially varying non-Gaussian material properties. A distributed implementation of the parallel algorithm is carried out using MPI and PETSc parallel libraries. The scalabilities of the algorithm are investigated in a Linux cluster.

42 ENGINEERING↗

An iterative particle filter approach for coupled hydro-geophysical inversion of a controlled infiltration experiment

The modeling of unsaturated groundwater flow is affected by a high degree of uncertainty related to both measurement and model errors. Geophysical methods such as Electrical Resistivity Tomography (ERT) can provide useful indirect information on the hydrological processes occurring in the vadose zone. In this paper, we propose and test an iterated particle filter method to solve the coupled hydrogeophysical inverse problem. We focus on an infiltration test monitored by time-lapse ERT and modeled using Richards equation. The goal is to identify hydrological model parameters from ERT electrical potential measurements. Traditional uncoupled inversion relies on the solution of two sequential inverse problems, the first one applied to the ERT measurements, the second one to Richards equation. This approach does not ensure an accurate quantitative description of the physical state, typically violating mass balance. To avoid one of these two inversions and incorporate in the process more physical simulation constraints, we cast the problem within the framework of a SIR (Sequential Importance Resampling) data assimilation approach that uses a Richards equation solver to model the hydrological dynamics and a forward ERT simulator combined with Archie's law to serve as measurement model. ERT observations are then used to update the state of the system as well as to estimate the model parameters and their posterior distribution. The limitations of the traditional sequential Bayesian approach are investigated and an innovative iterative approach is proposed to estimate the model parameters with high accuracy. The numerical properties of the developed algorithm are verified on both homogeneous and heterogeneous synthetic test cases based on a real-world field experiment.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Stellar surface as low-rank modification in iterative methods for binary neutron stars

We present a new multidomain spectral method for the treatment of non-spherical stellar surfaces in iterative methods for binary neutron stars. A stellar surface changes throughout the course of an iterative solution, potentially stalling the convergence. Our method affords low-complexity updates of the relevant subdomain preconditioners, thereby avoiding such stalling. Unlike current collocation (or nodal) approaches for treating surfaces (which rely on coordinate transformations to ensure that stellar surfaces arise at subdomain boundaries), our approach requires no regridding or nontrivial Jacobians. For polytropes with an equation of state specified by an integer polytropic index, our method delivers exponential accuracy with increased truncation, although for “stiff” equations of state (e.g. fractional) it suffers from the same accuracy loss as current methods. We have presented an outline of our approach before, but here present details with numerical tests.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Drifts, currents, and power scrape-off width in SOLPS-ITER modeling of DIII-D

The effects of drifts and associated flows and currents on the width of the parallel heat flux channel (λ q ) in the tokamak scrape-off layer (SOL) are analyzed using the SOLPS-ITER 2D fluid transport code. Motivation is supplied by Goldston’s heuristic drift (HD) model for λ q , which yields the same approximately inverse poloidal magnetic field dependence seen in multi-machine regression. The analysis, focusing on a DIII-D H-mode discharge, reveals HD-like features, including comparable density and temperature fall-off lengths in the SOL, and up-down ion pressure asymmetry that allows net cross-separatrix ion magnetic drift flux to exceed net anomalous ion flux. In experimentally relevant high-recycling cases, scans of both toroidal and poloidal magnetic field (B tor and B pol ) are conducted, showing minimal λ q dependence on either component of the field. Insensitivity to B tor is expected, and suggests that SOLPS-ITER is effectively capturing some aspects of HD physics. Absence of λ q dependence on B pol , however, is inconsistent with both the HD model and experimental results. As a result, the inconsistency is attributed to strong variation in the parallel Mach number, which violates one of the premises of the HD model.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Impact of nitrogen molecular breakup on divertor conditions in JET L-mode plasmas using SOLPS-ITER

SOLPS-ITER simulations of nitrogen-seeded, low-confinement mode plasmas in the Joint European Torus (JET) predict that the electron temperature in the low-field side (LFS) divertor leg is reduced locally by up to an order of magnitude when nitrogen is assumed to recycle as molecules (N 2 ) instead of atoms using a fixed nitrogen injection rate. The LFS divertor temperature reduction under the assumption of molecular recycling occurs due to a three-step mechanism: (1) the plasma penetration of nitrogen atoms is increased due to the strong triple bond of the N 2 molecule and the kinetic energy release in the dissociation event, both mechanisms contributing equally, (2) the abundance of (particularly multiply-charged) nitrogen ions in the divertor is increased and (3) the electron temperature is reduced due to the increase in radiation (by up to a factor of 4) from nitrogen ions. Setting the volume-integrated nitrogen radiated power to a constant value (0.6 MW) instead of the nitrogen injection rate, SOLPS-ITER predicts under the molecular nitrogen recycling assumption that the peak line-integrated N II, N III and N IV intensities in the LFS divertor are approximately within 15%, 35% and 5%, respectively, of the reference atomic nitrogen recycling case. The predicted peak N II, N III and N IV intensities under either assumption are within 30%, 65% and 5%, respectively, of measurements using the vertically viewing mirror-link divertor spectrometer (Meigs et al., 2010) in nitrogen-seeded JET L-mode plasmas (Lomanowski et al., 2019). ERO2.0 simulations using a constant nitrogen seeding rate on static background plasma solutions from EDGE2D-EIRENE (previously presented in Mäenpää et al., (2022), revised here to include fast reflections) predict that N II to N IV line emission is increased by 20% to 30% when nitrogen is assumed to recycle as molecules, demonstrating the importance of considering the effect of molecular dissociation reactions on the divertor plasma in a self-consistent manner.

Divertor↗