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At least 415 records · Page 23

Physical foundation and consistent formulation of atomic-level fluxes in transport processes

Irving and Kirkwood derived the transport equations from the principles of classical statistical mechanics using the Dirac delta to define local densities. Thereby, formulas for fluxes were obtained in terms of molecular variables. The Irving and Kirkwood formalism has inspired numerous formulations. Many of the later developments, however, considered it more rigorous to replace the Dirac delta with a continuous volume-weighted averaging function and subsequently defined fluxes as a volume density. Although these volume-averaged flux formulas have dominated the literature for decades and are widely implemented in popular molecular dynamics (MD) software, they are a departure from the well-established physical concept of fluxes. We review the historical developments that led to the unified physical concept of fluxes for transport phenomena. We then use MD simulations to show that these popular flux formulas conserve neither momentum nor energy, nor do they produce fluxes that are consistent with their physical definitions. We also use two different approaches to derive fluxes for general many-body potentials. The results of the formulation show that atomistic formulas for fluxes can be fully consistent with the physical definitions of fluxes and conservation laws.

74 ATOMIC AND MOLECULAR PHYSICS↗

Foundational Principles for Large-Scale Inference: Illustrations Through Correlation Mining

When can reliable inference be drawn in the ‘‘Big Data’’ context? This article presents a framework for answering this fundamental question in the context of correlation mining, with implications for general large-scale inference. In large-scale data applications like genomics, connectomics, and eco-informatics, the data set is often variable rich but sample starved: a regime where the number n of acquired samples (statistical replicates) is far fewer than the number p of observed variables (genes, neurons, voxels, or chemical constituents). Much of recent work has focused on understanding the computational complexity of proposed methods for ‘‘Big Data.’’ Sample complexity, however, has received relatively less attention, especially in the setting when the sample size n is fixed, and the dimension p grows without bound. To address this gap, we develop a unified statistical framework that explicitly quantifies the sample complexity of various inferential tasks. Sampling regimes can be divided into several categories: 1) the classical asymptotic regime where the variable dimension is fixed and the sample size goes to infinity; 2) the mixed asymptotic regime where both variable dimension and sample size go to infinity at comparable rates; and 3) the purely high-dimensional asymptotic regime where the variable dimension goes to infinity and the sample size is fixed. Each regime has its niche but only the latter regime applies to exa-scale data dimension. We illustrate this high-dimensional framework for the problem of correlation mining, where it is the matrix of pairwise and partial correlations among the variables that are of interest. Correlation mining arises in numerous applications and subsumes the regression context as a special case. We demonstrate various regimes of correlation mining based on the unifying perspective of high-dimensional learning rates and sample complexity for different structured covariance models and different inference tasks.

97 MATHEMATICS AND COMPUTING↗

Foundations for the Future Power System: Inverter-Based Resource Interconnection Standards

As power systems evolve to become reliant on solar, wind, batteries, and other inverter-based resources (IBRs), it is essential that those resources meet certain minimum performance and capability criteria designed to ensure the power system operates stably and reliably. Because those criteria, as enshrined in interconnection standards, take years to develop and are very long lived, they need to account for not only the present state of the power system but also its expected future state over the lifetime of the power plants to which they will apply. In addition, they need to be specific enough to ensure reliability without over specifying and, thereby, impeding innovation. Because power systems are shifting rapidly from a state where IBRs make up a small to medium portion of generation to one where the generation will, at times, come predominantly from IBRs, interconnection standards are especially challenging to develop today. Good interconnection standards can make the power system more reliable and less costly to operate, whereas poorly designed standards can lead to major problems, like the famous German 50.2-Hz problem, which introduced a risk of losing many gigawatts of solar on a frequency excursion and resulted in many IBRs being retrofitted at great cost to mitigate a major system reliability risk. Readying the power system by specifying forward-looking technical minimum functional capabilities for IBRs can be an effective approach to avoid future retrofits.

data models↗

Choice reaction time and grip strength as predictors of cardiovascular mortality in middle‐aged and elderly Japanese: from the Radiation Effects Research Foundation Adult Health study

Abstract Background Cognitive function and physical function are important predictors of mortality. Aim To investigate whether or not reaction time (RT) as a cognitive function and grip strength (GS) as a physical function were associated, alone or in combination, with mortality from heart disease or stroke. Methods The subjects included 4901 Adult Health Study participants in Hiroshima who had undergone RT and GS measurements, were 35–74 years old at baseline (1970–1972) and were followed until the end of 2007. Results After adjustment for other potential risk factors, RT was positively and GS was negatively associated with mortality from both heart disease and stroke. These associations were persistent in the model when adjusting simultaneously for RT, GS and other factors, but hazard ratios were attenuated. When we evaluated the associations by baseline age and gender, we found the greater hazard ratios for RT in the younger cohort, but no clear modification by age for GS. The interaction between RT and GS was statistically significant ( P = 0.012) for stroke mortality. In the stratified analyses divided using the age‐specific median value of RT or GS, the estimated hazard ratio of stroke mortality for RT was significant in participants with weak or strong GS but greater in the former, and for GS, it was only significant in participants with slow RT. Conclusion RT and GS, alone and in combination, predicted heart disease and stroke mortalities. Interventions for both cognitive function and physical function may be beneficial for the prevention of cardiovascular disease mortality.

Shimizu, Masaki↗

Building a better foundation: improving root-trait measurements to understand and model plant and ecosystem processes

Trait-based approaches provide a useful framework to investigate plant strategies for resource acquisition, growth, and competition, as well as plant impacts on ecosystem processes. Despite significant progress capturing trait variation within and among stems and leaves, identification of trait syndromes within fine-root systems and between fine roots and other plant organs is limited. Here we discuss three underappreciated areas where focused measurements of fine-root traits can make significant contributions to ecosystem science. These include assessment of spatiotemporal variation in fine-root traits, integration of mycorrhizal fungi into fine-root-trait frameworks, and the need for improved scaling of traits measured on individual roots to ecosystem-level processes. Progress in each of these areas is providing opportunities to revisit how below-ground processes are represented in terrestrial biosphere models. Targeted measurements of fine-root traits with clear linkages to ecosystem processes and plant responses to environmental change are strongly needed to reduce empirical and model uncertainties. Further identifying how and when suites of root and whole-plant traits are coordinated or decoupled will ultimately provide a powerful tool for modeling plant form and function at local and global scales.

54 ENVIRONMENTAL SCIENCES↗

Theoretical foundations of detection of terahertz radiation in laser-plasma interactions

A theory is developed enabling one to calculate the temporal profile and spectrum of a terahertz wave packet from the energy of the second harmonic of optical radiation generated during the nonlinear interaction between terahertz and circularly polarized laser pulses in the skin layer of an overdense plasma. It is shown that the spectral and temporal characteristics of the envelope of the second harmonic of optical radiation coincide with those of the terahertz pulse only at small durations of the detecting laser radiation. For long laser pulses, the temporal profile and spectrum of the second harmonic are mainly determined by the characteristics of optical radiation at the carrier frequency.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Foundations of automatic feature extraction at LHC–point clouds and graphs

Abstract Deep learning algorithms will play a key role in the upcoming runs of the Large Hadron Collider (LHC), helping bolster various fronts ranging from fast and accurate detector simulations to physics analysis probing possible deviations from the Standard Model. The game-changing feature of these new algorithms is the ability to extract relevant information from high-dimensional input spaces, often regarded as “replacing the expert” in designing physics-intuitive variables. While this may seem true at first glance, it is far from reality. Existing research shows that physics-inspired feature extractors have many advantages beyond improving the qualitative understanding of the extracted features. In this review, we systematically explore automatic feature extraction from a phenomenological viewpoint and the motivation for physics-inspired architectures. We also discuss how prior knowledge from physics results in the naturalness of the point cloud representation and discuss graph-based applications to LHC phenomenology.

Bhardwaj, Akanksha↗

ChatHPC: Building the Foundations for a Productive and Trustworthy AI-Assisted HPC Ecosystem

ChatHPC democratizes large language models for the high-performance computing (HPC) community by providing the infrastructure, ecosystem, and knowledge needed to apply modern generative AI technologies to rapidly create specific capabilities for critical HPC components while using relatively modest computational resources. Our divide-and-conquer approach focuses on creating a collection of reliable, highly specialized, and optimized AI assistants for HPC based on the cost-effective and fast Code Llama fine-tuning processes and expert supervision. We target major components of the HPC software stack, including programming models, runtimes, I/O, tooling, and math libraries. Thanks to AI, ChatHPC provides a more productive HPC ecosystem by boosting important tasks related to portability, parallelization, optimization, scalability, and instrumentation, among others. With relatively small datasets (on the order of KB), the AI assistants, which are created in a few minutes by using one node with two NVIDIA H100 GPUs and the ChatHPC library, can create new capabilities with Meta’s 7-billion parameter Code Llama base model to produce high-quality software with a level of trustworthiness of up to 90% higher than the 1.8-trillion parameter OpenAI ChatGPT-4o model for critical programming tasks in the HPC software stack.

Young, Aaron [ORNL] (ORCID:0000000254484667)↗

Foundation Models for Zero-Shot Segmentation of Scientific Images without AI-Ready Data

Zero-shot and prompt-based models have excelled at visual reasoning tasks by leveraging large-scale natural image corpora, but they often fail on sparse and domain-specific scientific image data. We introduce Zenesis, a no-code interactive computer vision platform designed to reduce data readiness bottlenecks in scientific imaging workflows. Zenesis integrates lightweight multimodal adaptation for zero-shot inference on raw scientific data, human-in-the-loop refinement, and heuristic-based temporal enhancement. We validate our approach on Focused Ion Beam Scanning Electron Microscopy (FIB-SEM) datasets of catalyst-loaded membranes. Zenesis outperforms baselines, achieving an average accuracy of 0.947, Intersection over Union (IoU) of 0.858, and Dice score of 0.923 on amorphous catalyst samples; and 0.987 accuracy, 0.857 IoU, and 0.923 Dice on crystalline samples. These results represent a significant performance gain over conventional methods such as Otsu thresholding and standalone models like the Segment Anything Model (SAM). Zenesis enables effective image segmentation in domains where annotated datasets are limited, offering a scalable solution for scientific discovery.

Mukherjee, Shubhabrata↗