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At least 415 records · Page 23

An Intelligent Archive Testbed Incorporating Data Mining

Many significant advances have occurred during the last two decades in remote sensing instrumentation, computation, storage, and communication technology. A series of Earth observing satellites have been launched by U.S. and international agencies and have been operating and collecting global data on a regular basis. These advances have created a data rich environment for scientific research and applications. NASA s Earth Observing System (EOS) Data and Information System (EOSDIS) has been operational since August 1994 with support for pre-EOS data. Currently, EOSDIS supports all the EOS missions including Terra (1999), Aqua (2002), ICESat (2002) and Aura (2004). EOSDIS has been effectively capturing, processing and archiving several terabytes of standard data products each day. It has also been distributing these data products at a rate of several terabytes per day to a diverse and globally distributed user community (Ramapriyan et al. 2009). There are other NASA-sponsored data system activities including measurement-based systems such as the Ocean Data Processing System and the Precipitation Processing system, and several projects under the Research, Education and Applications Solutions Network (REASoN), Making Earth Science Data Records for Use in Research Environments (MEaSUREs), and the Advancing Collaborative Connections for Earth-Sun System Science (ACCESS) programs. Together, these activities provide a rich set of resources constituting a value chain for users to obtain data at various levels ranging from raw radiances to interdisciplinary model outputs. The result has been a significant leap in our understanding of the Earth systems that all humans depend on for their enjoyment, livelihood, and survival. The trend in the community today is towards many distributed sets of providers of data and services. Despite this, visions for the future include users being able to locate, fuse and utilize data with location transparency and high degree of interoperability, and being able to convert data to information and usable knowledge in an efficient, convenient manner, aided significantly by automation (Ramapriyan et al. 2004; NASA 2005). We can look upon the distributed provider environment with capabilities to convert data to information and to knowledge as an Intelligent Archive in the Context of a Knowledge Building system (IA-KBS). Some of the key capabilities of an IA-KBS are: Virtual Product Generation, Significant Event Detection, Automated Data Quality Assessment, Large-Scale Data Mining, Dynamic Feedback Loop, and Data Discovery and Efficient Requesting (Ramapriyan et al. 2004).

Ramapriyan, H.↗

Analysis of Terminal Deletions using a Generalized Time-Dependent Model of Radiation-Induced Formation of Chromosomal Aberrations

We have developed a model that can simulate different types of radiation induced chromosomal aberrations (CA's) and can provide predictions on the frequency and size of chromosomes with terminal deletions. Chromosomes with terminal deletions lack telomeres and this can elicit sister chromatid unions and the prolonged breakage/fusion/bridge (B/F/B) cycles that have been observed in mammalian tumors. The loss of a single telomere has been shown to cause extensive genomic instability through the B/F/B cycle process. Our model uses a stochastic process of DNA broken end joining, in which a realistic spectrum of CA's is created from improperly joined DNA free ends formed by DNA double strand breaks (DSBs). The distribution of the DNA free ends is given by a mechanistic model that takes into account the chromatin structure and track structure for high-LET radiation. The model allows for DSB clustering from high-LET radiation and simulates the formation of CA's in stages that correspond to the actual time after radiation exposure. The time scale for CA formation is derived from experimental data on DSB repair kinetics. At any given time a nucleus may have intact chromosomes, CA's, and/or unrepaired fragments, some of which are defined as terminal deletions, if they are capped by one telomere. The model produces a spectrum of terminal deletions with their corresponding probabilities and size distributions for different heavy ions exposures for the first division after exposure. This data provides valuable information because there is limited experimental data available in the literature on the on the actual size of terminal deletions. We compare our model output to the available experimental data and make a reasonable extrapolation on the number of chromosomes lacking telomeres in human lymphocytes exposed to heavy ions. This model generates data which may lead to predictions on the rate of genomic instability in cells after exposure to high charge and energy nuclei affecting astronauts during space missions.

Ponomarev, Artem L.↗

Heart Shape to Fracture Distance: Characterizing Hydraulic Fracture Propagation before Hits

Estimating the distance from the hydraulic fracture tip to the monitor well can be useful for fracture characterization, well spacing optimization, and preventing parent-child well interference. A heart-shaped signal is referred to as the extensional precursor of a fracture hit recorded by crosswell strain measurements and can serve as a vital tool for such estimation. This study incorporates the 3D displacement discontinuity method (DDM) to understand the impact of fracture geometry and monitor well offset on the heart-shaped signal’s characteristics. Results from numerical simulation and analytical solutions reveal a strong linear correlation between the spatial extent of the heart-shaped signal and the fracture tip distance. This relationship was further developed to predict tip distance using field data from the Hydraulic Fracture Test Site 2 (HFTS2). A reasonable approximation result from field data further validates the methodology. In addition, it is worth noting that the estimation accuracy depends on the ratio between fracture dimension and tip distance. The findings of this study offer a novel approach for real-time monitoring and characterizing hydraulic fracture propagation, which can be further used for well spacing optimization in unconventional and enhanced geothermal system reservoir development, as well as caprock integrity monitoring for carbon sequestration projects.

58 GEOSCIENCES↗

Transitioning Earth Remote Sensing Data to Benefit Society: A Paradigm for a Center of Excellence

Over the past decade there has been a substantial increase in the number of Earth remote sensing satellites launched for research and operational usage and numerous others planned by the international community. These satellites have been used to varying degrees by their supporting agencies for weather and environmental monitoring, climate studies, disaster monitoring and response, and other humanitarian activities. While there are success stories on useful applications of remote sensing data, the broader use of these satellite assets by other organizations and entities has been limited for a number of reasons including lack of data services, data dissemination issues, and a general failure to engage the broader end user community with useful data access and knowledge of how to use the data and products. This paper describes some of these current limitations on the broader use of Earth remote sensing data by the international community and describes the concept of a general "Center of Excellence" to facilitate the development, transition, and utilization of these Earth remote sensing observations by the broader international community.

Transition to operations↗

Data are from Mars, Tools are from Venus

Although during the data production phase, the data producers will usually ensure the products to be easily used by the specific power users the products serve. However, most data products are also posted for general public to use. It is not straightforward for data producers to anticipate what tools that these general end-data users are likely to use. In this talk, we will try to help fill in the gap by going over various tools related to Earth Science and how they work with the existing NASA HDF (Hierarchical Data Format) data products and the reasons why some products cannot be visualized or analyzed by existing tools. One goal is for to give insights for data producers on how to make their data product more interoperable. On the other hand, we also provide some hints for end users on how to make tools work with existing HDF data products. (tool category list: check the comments) HDF-EOS tools: HDFView HDF-EOS Plugin, HEG, h4tonccf, hdf-eos2 dumper, NCL, MATLAB, IDL, etc.net; CDF-Java tools: Panoply, IDV, toosUI, NcML, etc.net; CDF-C tools: ArcGIS Desktop, GrADS, NCL, NCO, etc.; GDAL tools: ArcGIS Desktop, QGIS, Google Earth, etc.; CSV tools: ArcGIS Online, MS Excel, Tableau, etc.

hdf↗

AMSR-2 Daily Snow Depth Data Product Using a Neural Network Algorithm Trained by Collocated ICESat-2 Measurements

By using diffusion theory and Monte Carlo lidar radiative transfer simulations, Hu 1 et al. (2022b) has derived snow depth from the first-, second- and third-order moments of the lidar backscattering pathlength distribution. Lu 2 et al. (2022,2024) calculated the snow depth by applying the methods to the satellite ICESat-2 lidar measurements over the Arctic sea ice, as well as land surfaces of Northern Hemisphere. In this paper, a neural network (NN) algorithm, employing several channels from AMSR-2 and the humidity vertical profiles GMAO GEOS-IT, is trained to determine snow depth identified by time and geolocation matched 2019 ICESat-2 snow-depth data during winter months over the Arctic sea ice. The trained NN snow-depth was applied to 2014-2020 AMSR-2 clear pixel data, although the algorithms perform reasonably well in thinner clouds. This paper used AMSR-2 data, a passive microwave instrument to generate a wide range of snow depth data, covering extensive spatial areas in the cross-orbit direction.

Neural Network↗

Methods for Incorporating Model Uncertainty into Exoplanet Atmospheric Analysis

A key goal of exoplanet spectroscopy is to measure atmospheric properties, such as abundances of chemical species, in order to connect them to our understanding of atmospheric physics and planet formation. In this new era of high-quality JWST data, it is paramount that these measurement methods are robust. When comparing atmospheric models to observations, multiple candidate models may produce reasonable fits to the data. Typically, conclusions are reached by selecting the best-performing model according to some metric. This ignores model uncertainty in favor of specific model assumptions, potentially leading to measured atmospheric properties that are overconfident and/or incorrect. In this paper, we compare three ensemble methods for addressing model uncertainty by combining posterior distributions from multiple analyses: Bayesian model averaging, a variant of Bayesian model averaging using leave-one-out predictive densities, and stacking of predictive distributions. We demonstrate these methods by fitting the Hubble Space Telescope (HST) + Spitzer transmission spectrum of the hot Jupiter HD 209458b using models with different cloud and haze prescriptions. All of our ensemble methods lead to uncertainties on retrieved parameters that are larger but more realistic and consistent with physical and chemical expectations. Since they have not typically accounted for model uncertainty, uncertainties of retrieved parameters from HST spectra have likely been underreported. We recommend stacking as the most robust model combination method. Our methods can be used to combine results from independent retrieval codes and from different models within one code. They are also widely applicable to other exoplanet analysis processes, such as combining results from different data reductions.

79 ASTRONOMY AND ASTROPHYSICS↗

Application-Controlled Demand Paging for Out-of-Core Visualization

In the area of scientific visualization, input data sets are often very large. In visualization of Computational Fluid Dynamics (CFD) in particular, input data sets today can surpass 100 Gbytes, and are expected to scale with the ability of supercomputers to generate them. Some visualization tools already partition large data sets into segments, and load appropriate segments as they are needed. However, this does not remove the problem for two reasons: 1) there are data sets for which even the individual segments are too large for the largest graphics workstations, 2) many practitioners do not have access to workstations with the memory capacity required to load even a segment, especially since the state-of-the-art visualization tools tend to be developed by researchers with much more powerful machines. When the size of the data that must be accessed is larger than the size of memory, some form of virtual memory is simply required. This may be by segmentation, paging, or by paged segments. In this paper we demonstrate that complete reliance on operating system virtual memory for out-of-core visualization leads to poor performance. We then describe a paged segment system that we have implemented, and explore the principles of memory management that can be employed by the application for out-of-core visualization. We show that application control over some of these can significantly improve performance. We show that sparse traversal can be exploited by loading only those data actually required. We show also that application control over data loading can be exploited by 1) loading data from alternative storage format (in particular 3-dimensional data stored in sub-cubes), 2) controlling the page size. Both of these techniques effectively reduce the total memory required by visualization at run-time. We also describe experiments we have done on remote out-of-core visualization (when pages are read by demand from remote disk) whose results are promising.

Cox, Michael↗

TPSAS-NF1676L-16833-DND

Semantic Infrastructure is central to realizing the first goal of the ASDC's Strategic Plan: expanding the ASDC's customer base by improving access to ASDC data. ASDC data comprises a widely heterogeneous set of complex products which presents two significant challenges in data access: Helping customers discover, among many available options, the most suitable data products for their purpose; and Guiding customers to easily and appropriately use products. Data products differ significantly in terms of how the data was collected and processed, even with similar subject matter. Understanding differences is critical to using data effectively. To reach a broader customer range, the ASDC must provide prospective users with enough information to quickly and meaningfully compare and evaluate data products. Data formats and structures also differ among products. Applications displaying and analyzing data need access to federated and semantically disambiguated data. Semantic technologies offer functionality for addressing this issue. Ontologies can provide robust, stable domain models serving as common schema for discovering, evaluating, comparing, and integrating data from disparate products. Reasoning engines and triple stores can leverage ontologies to support intelligent search applications allowing users to discover, query, retrieve, and easily reformat data from a broad spectrum of sources.

Beth Huffer↗

Practical Understanding of Cancer Model Identifiability in Clinical Applications

Mathematical models are a core component in the foundation of cancer theory and have been developed as clinical tools in precision medicine. Modeling studies for clinical applications often assume an individual’s characteristics can be represented as parameters in a model and are used to explain, predict, and optimize treatment outcomes. However, this approach relies on the identifiability of the underlying mathematical models. In this study, we build on the framework of an observing-system simulation experiment to study the identifiability of several models of cancer growth, focusing on the prognostic parameters of each model. Our results demonstrate that the frequency of data collection, the types of data, such as cancer proxy, and the accuracy of measurements all play crucial roles in determining the identifiability of the model. We also found that highly accurate data can allow for reasonably accurate estimates of some parameters, which may be the key to achieving model identifiability in practice. As more complex models required more data for identification, our results support the idea of using models with a clear mechanism that tracks disease progression in clinical settings. For such a model, the subset of model parameters associated with disease progression naturally minimizes the required data for model identifiability.

59 BASIC BIOLOGICAL SCIENCES↗

Tournament-Based Pretraining to Accelerate Federated Learning

Advances in hardware, proliferation of compute at the edge, and data creation at unprecedented scales have made federated learning (FL) necessary for the next leap forward in pervasive machine learning. For privacy and network reasons, large volumes of data remain stranded on endpoints located in geographically austere (or at least austere network-wise) locations. However, challenges exist to the effective use of these data. To solve the system and functional level challenges, we present an three novel variants of a serverless federated learning framework. We also present tournament-based pretraining, which we demonstrate significantly improves model performance in some experiments. Overall, these extensions to FL and our novel training method enable greater focus on science rather than ML development.

Baughman, Matt↗

Measurement Adequacy for Monitoring Data Center Oscillations

Artificial intelligence (AI) training data centers with periodic load profiles can induce sustained grid oscillations across a wide frequency range, making accurate monitoring essential for reliable power system operation. This report evaluates the adequacy of existing measurement systems for monitoring such oscillations, focusing on phasor measurement units (PMUs) and point-on-wave (POW) measurement systems. The analysis shows that while PMUs are highly effective for monitoring low-frequency electromechanical oscillations, they have inherent limitations in accurately representing higher-frequency oscillations due to constraints imposed by reporting rates and the bandwidth of phasor estimation filters. Even when configured with higher reporting rates, the filtering inherent in the phasor estimation process can significantly attenuate oscillation magnitudes, potentially leading to underestimation of oscillatory behavior. This has important implications for compliance and performance monitoring of large loads. To address the limitations associated with PMU-based monitoring, the report examines the use of high-resolution POW measurements, which can capture oscillations across a broader frequency range. However, continuous POW monitoring introduces practical challenges related to large data volumes, communication bandwidth, and real-time data processing. For this reason, the report also discusses emerging approaches that use POW measurements as a complementary capability alongside PMUs to improve observability of oscillations from large data center loads.

47 OTHER INSTRUMENTATION↗

Characteristics of response factors of coaxial gaseous rocket injectors

The results of an experimental investigation undertaken to determine the frequency dependence of the response factors of various gaseous propellant rocket injectors subject to axial instabilities are presented. The injector response factors were determined, using the modified impedance-tube technique, under cold-flow conditions simulating those observed in unstable rocket motors. The tested injectors included a gaseous-fuel injector element, a gaseous-oxidizer injector element and a coaxial injector with both fuel and oxidizer elements. Emphasis was given to the determination of the dependence of the injector response factor upon the open-area ratio of the injector, the length of the injector orifice, and the pressure drop across the injector orifices. The measured data are shown to be in reasonable agreement with the corresponding injector response factor data predicted by the Feiler and Heidmann model.

Janardan, B. A.↗

The dryout region in frictionally heated sliding contacts

Some conditions under which boiling and two-phase flow can occur in or near a wet sliding contact are determined and illustrated. The experimental apparatus consisted of a tool pressed against an instrumented slider plate and motion picture sequences at 4000 frames/sec. The temperature and photographic data demonstrated surface conditions of boiling, drying, trapped gas evolution (solutions), and volatility of fluid mixture components. The theoretical modeling and analysis are in reasonable agreement with experimental data.

Hendricks, R. C.↗

Measuring High Gas Temperatures

Program provides extrapolation calculations of high gas temperature based on theoretical heating curve of pulsed thermocouples. Program requires as input mach number, wall temperature, and total pressure in addition to thermocouple data. Tests indicate program extrapolates reasonably-accurate gas temperatures from pulsed-thermocouple data.

Will, H. A.↗

The dryout region in frictionally heated sliding contacts

Some conditions under which boiling and two-phase flow can occur in or near a wet sliding contact are determined and illustrated. The experimental apparatus consisted of a tool pressed against an instrumented slider plate and motion picture sequences at 4000 frames/sec. The temperature and photographic data demonstated surface conditions of boiling, dry, trapped gas evolution (solutions), and volatility of fluid mixture components. The theoretical modeling and analysi are in reasonable agreement with experimental data. Previously announced in STAR as N82-28574

Hendricks, R. C.↗

The Langley Annular Transonic Tunnel

Report describes the development of the Langley annular transonic tunnel, a facility in which test Mach numbers from 0.6 to slightly over 1.0 are achieved by rotating the test model in an annular passage between two concentric cylinders. Data obtained for two-dimensional airfoil models in the Langley annular transonic tunnel at subsonic and sonic speeds are shown to be in reasonable agreement with experimental data from other sources and with theory when comparisons are made for nonlifting conditions or for equal normal-force coefficients rather than for equal angles of attack. The trends of pressure distributions obtained from measurements in the Langley annular transonic tunnel are consistent with distributions calculated for Prandtl-Meyer flow.

Habel, Louis W↗

GMI-IPS: Python Processing Software for Aircraft Campaigns

NASA's Atmospheric Tomography Mission (ATom) seeks to understand the impact of anthropogenic air pollution on gases in the Earth's atmosphere. Four flight campaigns are being deployed on a seasonal basis to establish a continuous global-scale data set intended to improve the representation of chemically reactive gases in global atmospheric chemistry models. The Global Modeling Initiative (GMI), is creating chemical transport simulations on a global scale for each of the ATom flight campaigns. To meet the computational demands required to translate the GMI simulation data to grids associated with the flights from the ATom campaigns, the GMI ICARTT Processing Software (GMI-IPS) has been developed and is providing key functionality for data processing and analysis in this ongoing effort. The GMI-IPS is written in Python and provides computational kernels for data interpolation and visualization tasks on GMI simulation data. A key feature of the GMI-IPS, is its ability to read ICARTT files, a text-based file format for airborne instrument data, and extract the required flight information that defines regional and temporal grid parameters associated with an ATom flight. Perhaps most importantly, the GMI-IPS creates ICARTT files containing GMI simulated data, which are used in collaboration with ATom instrument teams and other modeling groups. The initial main task of the GMI-IPS is to interpolate GMI model data to the finer temporal resolution (1-10 seconds) of a given flight. The model data includes basic fields such as temperature and pressure, but the main focus of this effort is to provide species concentrations of chemical gases for ATom flights. The software, which uses parallel computation techniques for data intensive tasks, linearly interpolates each of the model fields to the time resolution of the flight. The temporally interpolated data is then saved to disk, and is used to create additional derived quantities. In order to translate the GMI model data to the spatial grid of the flight path as defined by the pressure, latitude, and longitude points at each flight time record, a weighted average is then calculated from the nearest neighbors in two dimensions (latitude, longitude). Using SciPya's Regular Grid Interpolator, interpolation functions are generated for the GMI model grid and the calculated weighted averages. The flight path points are then extracted from the ATom ICARTT instrument file, and are sent to the multi-dimensional interpolating functions to generate GMI field quantities along the spatial path of the flight. The interpolated field quantities are then written to a ICARTT data file, which is stored for further manipulation. The GMI-IPS is aware of a generic ATom ICARTT header format, containing basic information for all flight campaigns. The GMI-IPS includes logic to edit metadata for the derived field quantities, as well as modify the generic header data such as processing dates and associated instrument files. The ICARTT interpolated data is then appended to the modified header data, and the ICARTT processing is complete for the given flight and ready for collaboration. The output ICARTT data adheres to the ICARTT file format standards V1.1. The visualization component of the GMI-IPS uses Matplotlib extensively and has several functions ranging in complexity. First, it creates a model background curtain for the flight (time versus model eta levels) with the interpolated flight data superimposed on the curtain. Secondly, it creates a time-series plot of the interpolated flight data. Lastly, the visualization component creates averaged 2D model slices (longitude versus latitude) with overlaid flight track circles at key pressure levels. The GMI-IPS consists of a handful of classes and supporting functionality that have been generalized to be compatible with any ICARTT file that adheres to the base class definition. The base class represents a generic ICARTT entry, only defining a single time entry and 3D spatial positioning parameters. Other classes inherit from this base class; several classes for input ICARTT instrument files, which contain the necessary flight positioning information as a basis for data processing, as well as other classes for output ICARTT files, which contain the interpolated model data. Utility classes provide functionality for routine procedures such as: comparing field names among ICARTT files, reading ICARTT entries from a data file and storing them in data structures, and returning a reduced spatial grid based on a collection of ICARTT entries. Although the GMI-IPS is compatible with GMI model data, it can be adapted with reasonable effort for any simulation that creates Hierarchical Data Format (HDF) files. The same can be said of its adaptability to ICARTT files outside of the context of the ATom mission. The GMI-IPS contains just under 30,000 lines of code, eight classes, and a dozen drivers and utility programs. It is maintained with GIT source code management and has been used to deliver processed GMI model data for the ATom campaigns that have taken place to date.

Damon, M. R.↗