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At least 397 records · Page 22

DISCOVERY OF A DAMPED Lyα ABSORBER AT z = 3.3 ALONG A GALAXY SIGHT-LINE IN THE SSA22 FIELD

Using galaxies as background light sources to map the Lyα absorption lines is a novel approach to study Damped Lyα Absorbers (DLAs). We report the discovery of an intervening z = 3.335 ± 0.007 DLA along a galaxy sight-line identified among 80 Lyman Break Galaxy (LBG) spectra obtained with our Very Large Telescope/Visible Multi-Object Spectrograph survey in the SSA22 field. The measured DLA neutral hydrogen (H i) column density is log(N{sub H} {sub i}/cm{sup −2}) = 21.68 ± 0.17. The DLA covering fraction over the extended background LBG is >70% (2σ), yielding a conservative constraint on the DLA area of ≳1 kpc{sup 2}. Our search for a counterpart galaxy hosting this DLA concludes that there is no counterpart galaxy with star formation rate larger than a few M{sub ⊙} yr{sup −1}, ruling out an unobscured violent star formation in the DLA gas cloud. We also rule out the possibility that the host galaxy of the DLA is a passive galaxy with M{sub *} ≳ 5 × 10{sup 10}M{sub ⊙} or a heavily dust-obscured galaxy with E(B − V) ≳ 2. The DLA may coincide with a large-scale overdensity of the spectroscopic LBGs. The occurrence rate of the DLA is compatible with that of DLAs found in QSO sight-lines.

79 ASTRONOMY AND ASTROPHYSICS↗

Discovery of intrinsic linear polarization in SS433

Observations of variable linear polarization in the optical range in the unique radio and X-ray source SS 433, which is characterized by moving emission lines in its visible and near-IR spectra, are reported. The observations were made with an unfiltered GaAs photocathode covering the spectral region 3000-9000 A, with a passband characteristic wavelength near 7000 A. Measurements reveal the presence of both a long-term and a very short time-scale variation in linear polarization in the continuum and in H-alpha, which indicate that a substantial fraction of the polarization is intrinsic to SS 433 and not produced in the interstellar medium. It is suggested that the most likely source of polarization in the optical continuum is electron scattering, and constraints on models of SS 433 implied by the discovery of intrinsic polarization are considered.

Mclean, I. S.↗

NuSTAR and XMM-Newton observations of luminous, heavily obscured, WISE-selected quasars at z ∼ 2

We report on a NuSTAR and XMM-Newton program that has observed a sample of three extremely luminous, heavily obscured WISE-selected active galactic nuclei (AGNs) at z ∼ 2 across a broad X-ray band (0.1 – 79 keV). The parent sample, selected to be faint or undetected in the WISE 3.4 μm (W1) and 4.6 μm (W2) bands but bright at 12 μm (W3) and 22 μm (W4), are extremely rare, with only ∼1000 so-called 'W1W2-dropouts' across the extragalactic sky. Optical spectroscopy reveals typical redshifts of z ∼ 2 for this population, implying rest-frame mid-IR luminosities of νL {sub ν}(6 μm) ∼ 6 × 10{sup 46} erg s{sup –1} and bolometric luminosities that can exceed L {sub bol} ∼ 10{sup 14} L {sub ☉}. The corresponding intrinsic, unobscured hard X-ray luminosities are L(2-10 keV) ∼ 4 × 10{sup 45} erg s{sup –1} for typical quasar templates. These are among the most AGNs known, though the optical spectra rarely show evidence of a broad-line region and the selection criteria imply heavy obscuration even at rest-frame 1.5 μm. We designed our X-ray observations to obtain robust detections for gas column densities N {sub H} ≤ 10{sup 24} cm{sup –2}. In fact, the sources prove to be fainter than these predictions. Two of the sources were observed by both NuSTAR and XMM-Newton, with neither being detected by NuSTAR (f {sub 3-24} {sub keV} ≲ 10{sup –13} erg cm{sup –2} s{sup –1}), and one being faintly detected by XMM-Newton (f {sub 0.5-10} {sub keV} ∼ 5 × 10{sup –15} erg cm{sup –2} s{sup –1}). A third source was observed only with XMM-Newton, yielding a faint detection (f {sub 0.5-10} {sub keV} ∼ 7 × 10{sup –15} erg cm{sup –2} s{sup –1}). The X-ray data imply these sources are either X-ray weak, or are heavily obscured by column densities N {sub H} ≳ 10{sup 24} cm{sup –2}. The combined X-ray and mid-IR analysis seems to favor this second possibility, implying the sources are extremely obscured, consistent with Compton-thick, luminous quasars. The discovery of a significant population of heavily obscured, extremely luminous AGNs would not conform to the standard paradigm of a receding torus, in which more luminous quasars are less likely to be obscured, and instead suggests that an additional source of obscuration is present in these extreme sources.

79 ASTRONOMY AND ASTROPHYSICS↗

GLAST: Exploring Nature's Highest Energy Processes with the Gamma-ray Large Area Space Telescope

The Gamma-ray Large Area Space Telescope (GLAST) is an international and multi-agency space mission that will study the cosmos in the energy range 10 keV-300 GeV. Several successful exploratory missions in gamma-ray astronomy led to the Energetic Gamma Ray Experiment Telescope (EGRET) instrument on the Compton Gamma Ray Observatory (CGRO). Launched in 1991, EGRET made the first complete survey of the sky in the 30 MeV-10 GeV range. EGRET showed the high-energy gamma-ray sky to be surprisingly dynamic and diverse, with sources ranging from the sun and moon to massive black holes at large redshifts. Most of the gamma-ray sources detected by EGRET remain unidentified. In light of the discoveries with EGRET, the great potential of the next generation gamma-ray telescope can be appreciated. GLAST will have an imaging gamma-ray telescope vastly more capable than instruments flown previously, as well as a secondary instrument to augment the study of gamma-ray bursts. The main instrument, the Large Area Telescope (LAT), will have superior area, angular resolution, field of view, and deadtime that together will provide a factor of 30 or more advance in sensitivity, as well as provide capability for study of transient phenomena. The GLAST Burst Monitor (GBM) will have a field of view several times larger than the LAT and will provide spectral coverage of gamma-ray bursts that extends from the lower limit of the LAT down to 10 keV. The basic parameters of the GBM are compared to those of the Burst and Transient Source Experiment (BATSE) instrument on CGRO in Table 1-2. With the LAT and GBM, GLAST will be a flexible observatory for investigating the great range of astrophysical phenomena best studied in high-energy gamma rays. NASA plans to launch GLAST in late 2005.

Digel, Seth↗

Metagenomic discovery of polybrominated diphenyl ether biosynthesis by marine sponges

Naturally produced polybrominated diphenyl ethers (PBDEs) pervade the marine environment and structurally resemble toxic man-made brominated flame retardants. PBDEs bioaccumulate in marine animals and are likely transferred to the human food chain. However, the biogenic basis for PBDE production in one of their most prolific sources, marine sponges of the order Dysideidae, remains unidentified. Here, we report the discovery of PBDE biosynthetic gene clusters within sponge microbiome-associated cyanobacterial endosymbionts by employing an unbiased metagenome mining approach. By expression of PBDE biosynthetic genes in heterologous cyanobacterial hosts, we correlate the structural diversity of naturally produced PBDEs to modifications within PBDE biosynthetic gene clusters in multiple sponge holobionts. Our results establish the genetic and molecular foundation for the production of PBDEs in one of the most abundant natural sources of these molecules, further setting the stage for a metagenomic-based inventory of other PBDE sources in the marine environment.

59 BASIC BIOLOGICAL SCIENCES↗

Rapid X-ray and optical variability in the X-ray selected BL Lacertae object IE 1402.3 + 0416

Results from X-ray and optical observations of the X-ray-discovered BL Lac object 1E 1402.3 + 0416 are presented, where the X-ray measurements were carried out with the Channel Multiplier Array (CMA) and Medium Energy experiment (ME) detectors on board Exosat. These measurements revealed an intensity decrease by a factor of two on a time scale of a few hours. At maximum flux, the source was significantly greater than at the time of the Einstein Image Proportional Counter (IPC) discovery observation. The 2-6 keV X-ray spectrum was determined by the ME experiment, and IPC, HRI, and CMA data were subsequently compared. The source varied over the years by a factor of five; its brightest state was within the last three years. It is noted that a redshift greater than 0.2 would require that anisotropic emission mechanisms be invoked.

Giommi, P.↗

Search for correlations between the arrival directions of IceCube neutrino events and ultrahigh-energy cosmic rays detected by the Pierre Auger Observatory and the Telescope Array

This study presents the results of different searches for correlations between very high-energy neutrino candidates detected by IceCube and the highest-energy cosmic rays measured by the Pierre Auger Observatory and the Telescope Array. We first consider samples of cascade neutrino events and of high-energy neutrino-induced muon tracks, which provided evidence for a neutrino flux of astrophysical origin, and study their cross-correlation with the ultrahigh-energy cosmic ray (UHECR) samples as a function of angular separation. We also study their possible directional correlations using a likelihood method stacking the neutrino arrival directions and adopting different assumptions on the size of the UHECR magnetic deflections. Finally, we perform another likelihood analysis stacking the UHECR directions and using a sample of through-going muon tracks optimized for neutrino point-source searches with sub-degree angular resolution. No indications of correlations at discovery level are obtained for any of the searches performed. The smallest of the p-values comes from the search for correlation between UHECRs with IceCube high-energy cascades, a result that should continue to be monitored.

79 ASTRONOMY AND ASTROPHYSICS↗

Extraction of Tumor Site from Cancer Pathology Reports using Deep Filters

Purpose: Pathology reports are the primary source of information concerning the millions of cancer cases across the United States. Cancer registries manually process the pathology reports to extract the pertinent information including primary tumor site, behavior, histology, laterality, and grade. Processing a large volume of the pathology reports in a timely manner is a continuing challenge for cancer registries. The purpose of this study is to develop an information extraction pipeline to reliably and efficiently extract reportable information. Method: We have developed a novel inverse-regression (IR) based information extraction pipeline. The inverse-regression based supervised filter has been successfully applied to many application domains. However, its application to the information extraction from unstructured text is hindered primarily by the extreme high-dimensionality of n-gram representations of text. In this study, we attempt to overcome the obstacles by a novel bootstrapping strategy. First, we use an information-theoretic mutual information based filter to discard the excessive and redundant n-gram features. This step reduces the size and improves the condition number of the sample covariance matrix, thus reducing the computational cost and improving the numerical stability of the subsequent inverse-regression step. Then we use localized sliced inverse-regression (LSIR) to learn a low-dimensional discriminatory subspace for information inference. In particular, we use the k-nearest neighbors of an unlabeled pathology report in the learned representation to infer the desired information from the labeled data in a supervised manner. Results: The experiments were conducted on a set of de-identified pathology reports with human expert labels as the ground truth. Our pipeline consistently performed better than or comparable to the best performing state-of-the-art methods while reducing the training and inference times substantially. Conclusion: Our results demonstrate the potential of inverse-regression based information extraction pipeline for reliable and efficient information extraction from unstructured text. The information extracted from the pathology reports can be used along with clinical information, medical imaging, and genomic information to instigate discoveries in cancer research.

Dubey, Abhishek↗

pyQuARC: Open Source Library for Earth Observation Metadata Quality Assessment

Metadata quality is essential to effective data discovery and has become increasingly vital as more Earth Science data sets become available. The Common Metadata Repository (CMR) hosts metadata describing NASA’s Earth Observation data products, which are archived across 12 Distributed Active Archive Centers (DAACs). The Analysis and Review of CMR (ARC) Team, located at Marshall Space Flight Center, conducts metadata quality assessments to ensure that these data products are discoverable, accessible, and usable. To achieve these goals, the ARC team has developed a metadata quality assessment framework to evaluate metadata completeness, correctness, and consistency. ARC uses a combination of manual and automated methods to assess these three components and identify areas of improvement; the team then collaborates with the DAACs to resolve any findings. To streamline this process, ARC is currently developing a host of scripts, known as pyQuARC, to automate metadata quality assessments as much as possible. pyQuARC is an open source library for Earth Observation Metadata Quality Assessment, and the tool utilizes ARC’s metadata quality assessment framework to make basic validation checks, pinpoint inconsistencies between dataset-level (i.e. collection) and file-level (i.e. granule) metadata, and identify opportunities for more descriptive and robust information. Since pyQuARC is also customizable, other users can make modifications as needed, and future metadata standards can also be implemented. Once pyQuARC is fully developed, it will support multiple schema types to serve the broader EOSDIS metadata community. This presentation will provide an overview of pyQuARC and its process of development while showcasing the tool’s valuable features and uses.

Jenny Wood↗

The discovery of an infrared reflection nebula surrounding R Coronae Australis IRS 5

The infrared source R CrA IRS 5 in the R CrA dark cloud has been mapped, and it is found that it is extended at H (1.6 micron) and at K (2.2 micron). The geometry of the data suggest that this object consists of a disk and polar reflection lobe surrounding a star, similar to GSS 30 in the Ophiuchus dark cloud and to SGS 1 in the NGC 1333 dark cloud. The illuminating star has an effective temperature below 8000 K, a luminosity less than 9 solar luminosities, and lies above the main sequence. The luminosity of this star is smaller than the luminosity of any other known star which illuminates an infrared reflection nebula.

Castelaz, Michael W.↗

Origin of the heavy elements in binary neutron-star mergers from a gravitational-wave event

The cosmic origin of elements heavier than iron has long been uncertain. Theoretical modelling shows that the matter that is expelled in the violent merger of two neutron stars can assemble into heavy elements such as gold and platinum in a process known as rapid neutron capture (r-process) nucleosynthesis. The radioactive decay of isotopes of the heavy elements is predicted to power a distinctive thermal glow (a ‘kilonova’). The discovery of an electromagnetic counterpart to the gravitational-wave source GW170817 represents the first opportunity to detect and scrutinize a sample of freshly synthesized r-process elements. Here we report models that predict the electromagnetic emission of kilonovae in detail and enable the mass, velocity and composition of ejecta to be derived from observations. We compare the models to the optical and infrared radiation associated with the GW170817 event to argue that the observed source is a kilonova. We infer the presence of two distinct components of ejecta, one composed primarily of light (atomic mass number less than 140) and one of heavy (atomic mass number greater than 140) r-process elements. The ejected mass and a merger rate inferred from GW170817 imply that such mergers are a dominant mode of r-process production in the Universe.

Kasen, Daniel↗

A universal language for finding mass spectrometry data patterns

Despite being information rich, the vast majority of untargeted mass spectrometry data are underutilized; most analytes are not used for downstream interpretation or reanalysis after publication. The inability to dive into these rich raw mass spectrometry datasets is due to the limited flexibility and scalability of existing software tools. Here, in this study, we introduce a new language, the Mass Spectrometry Query Language (MassQL), and an accompanying software ecosystem that addresses these issues by enabling the community to directly query mass spectrometry data with an expressive set of user-defined mass spectrometry patterns. Illustrated by real-world examples, MassQL provides a data-driven definition of chemical diversity by enabling the reanalysis of all public untargeted metabolomics data, empowering scientists across many disciplines to make new discoveries. MassQL has been widely implemented in multiple open-source and commercial mass spectrometry analysis tools, which enhances the ability, interoperability and reproducibility of mining of mass spectrometry data for the research community.

Damiani, Tito [Czech Academy of Sciences (CAS), Pr↗

PREDICTING A THIRD PLANET IN THE KEPLER-47 CIRCUMBINARY SYSTEM

We have studied the possibility that a third circumbinary planet in the Kepler-47 planetary system is the source of the single unexplained transiting event reported during the discovery of these planets. We applied the MEGNO technique to identify regions in the phase space where a third planet can maintain quasi-periodic orbits, and assessed the long-term stability of the three-planet system by integrating the entire five bodies (binary + planets) for 10 Myr. We identified several stable regions between the two known planets as well as a region beyond the orbit of Kepler-47c where the orbit of the third planet could be stable. To constrain the orbit of this planet, we used the measured duration of the unexplained transit event (∼4.15 hr) and compared that with the transit duration of the third planet in an ensemble of stable orbits. To remove the degeneracy among the orbits with similar transit durations, we considered the planet to be in a circular orbit and calculated its period analytically. The latter places an upper limit of 424 days on the orbital period of the third planet. Our analysis suggests that if the unexplained transit event detected during the discovery of the Kepler-47 circumbinary system is due to a planetary object, this planet will be in a low eccentricity orbit with a semi-major axis smaller than 1.24 AU. Further constraining of the mass and orbital elements of this planet requires a re-analysis of the entire currently available data, including those obtained post-announcement of the discovery of this system. We present details of our methodology and discuss the implication of the results.

79 ASTRONOMY AND ASTROPHYSICS↗

p -Coumaroylation of lignin occurs outside of commelinid monocots in the eudicot genus Morus (mulberry)

Abstract The presence of p-coumarate (pCA) in plant cell walls is generally considered to be a trait present only in commelinid monocots. Here, we show that this long-held overgeneralizing assumption is incorrect and that mulberry trees (Morus) are eudicot plants that have lignins derived in part from monolignol pCA esters. As in commelinid monocots, the lignin-bound pCA acylates the sidechain γ-hydroxyl of both coniferyl and syringyl units. This discovery expands mulberry’s potential applications to include being a source of p-coumaric acid, a supplier of nutritious berries, a forage crop, a decorative plant, and the main food source for silkworms.

60 APPLIED LIFE SCIENCES↗

The first brown dwarf/planetary-mass object in the 32 Orionis group

The 32 Orionis group is a co-moving group of roughly 20 young (24 Myr) M3-B5 stars 100 pc from the Sun. Here we report the discovery of its first substellar member, WISE J052857.69+090104.2. This source was previously reported to be an M giant star based on its unusual near-infrared spectrum and lack of measureable proper motion. We re-analyze previous data and new moderate-resolution spectroscopy from Magellan/Folded-port InfraRed Echellette to demonstrate that this source is a young near-infrared L1 brown dwarf with very low surface gravity features. Spectral model fits indicate T{sub eff} = 1880{sub −70}{sup +150} K and logg = 3.8{sub −0.2}{sup +0.2}, consistent with a 15–22 Myr object with a mass near the deuterium-burning limit. Its sky position, estimated distance, kinematics (both proper motion and radial velocity), and spectral characteristics are all consistent with membership in 32 Orionis, and its temperature and age imply a mass (M = 14{sub −3}{sup +4} M{sub J}) that straddles the brown dwarf/planetary-mass object boundary. The source has a somewhat red J−W2 color compared to other L1 dwarfs, but this is likely a low-gravity-related temperature offset; we find no evidence of significant excess reddening from a disk or cool companion in the 3–5 μm waveband.

79 ASTRONOMY AND ASTROPHYSICS↗

FIRST J153350.8+272729: The Radio Afterglow of a Decades-old Tidal Disruption Event

We present the discovery of the fading radio transient FIRST J153350.8+272729. The source had a maximum observed 5 GHz radio luminosity of 8 × 10 39 erg s –1 in 1986, but by 2019 had faded by a factor of nearly 400. It is located at the center of a galaxy (SDSS J153350.89+272729) at 147 Mpc, which shows weak Type II Seyfert activity. We show that a tidal disruption event (TDE) is the preferred scenario for FIRST J153350.8+272729, although it could plausibly be interpreted as the afterglow of a long-duration γ-ray burst. This is only the second TDE candidate to be first discovered at radio wavelengths. Its luminosity fills a gap between the radio afterglows of subrelativistic TDEs in the local universe, and relativistic TDEs at high redshifts. The unusual properties of FIRST J153350.8+272729 (ongoing nuclear activity in the host galaxy, high radio luminosity) motivate more extensive TDE searches in untargeted radio surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

RTN-008: Rubin Observatory Processing of Gravitational Wave TOO Data in the Early Operations Era

Since the watershed discovery of an electromagnetic counterpart to the LIGO/VIRGO gravitational wave source GW170817, multi-messenger astrophysics has emerged as a major area of strategic focus for the NSF. Rubin Observatory’s depth, survey speed, and data management systems will make it a key asset in the search for EM counterparts. Exploiting this capability during the phases of Rubin commissioning and early operations that coincide with GW observing run O4 may require special actions, however. We discuss potential approaches to data access, template building, and special data processing.

79 ASTRONOMY AND ASTROPHYSICS↗

The 1979 X-ray outburst of Cen X-4

X-ray observations of the first major outburst (since its initial discovery in 1969) of the "classical" transient X-ray source Cen X-4 were obtained with the Ariel 5 All-Sky Monitor. The flare light curve exhibits a double-peaked maximum at a level of approximately 4 times the Crab nebula, and its duration and characteristic decay time scale are the shortest yet observed from the class of "soft" X-ray transients. A total X-ray output of approximately 3 x 10 to the 43rd power ergs, a factor of approximately 20 less than that of the 1969 outburst is estimated. In addition, evidence is found for a regular modulation of the flux during the decline phase at a period of 8.2 plus or minus 0.2 hours. The existing data are consistent with a source model involving episodic mass exchange from a late-type dwarf onto a neutron star comparison in a relatively close binary system.

Kaluzienski, L. J.↗