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At least 397 records · Page 22

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DOE OSTI2024

Interpretation of autoencoder-learned collective variables using Morse–Smale complex and sublevelset persistent homology: An application on molecular trajectories

Dimensionality reduction often serves as the first step toward a minimalist understanding of physical systems as well as the accelerated simulations of them. In particular, neural network-based nonlinear dimensionality reduction methods, such as autoencoders, have shown promising outcomes in uncovering collective variables (CVs). However, the physical meaning of these CVs remains largely elusive. In this work, we constructed a framework that (1) determines the optimal number of CVs needed to capture the essential molecular motions using an ensemble of hierarchical autoencoders and (2) provides topology-based interpretations to the autoencoder-learned CVs with Morse–Smale complex and sublevelset persistent homology. Furthermore, this approach was exemplified using a series of n-alkanes and can be regarded as a general, explainable nonlinear dimensionality reduction method.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2025

Mitigating imaging systematics for DESI 2024 emission Line Galaxies and beyond

Emission Line Galaxies (ELGs) are one of the main tracers that the Dark Energy Spectroscopic Instrument (DESI) uses to probe the universe. However, they are afflicted by strong spurious correlations between target density and observing conditions known as imaging systematics. In this paper, we present the imaging systematics mitigation applied to the DESI Data Release 1 (DR1) large-scale structure catalogs used in the DESI 2024 cosmological analyses. We also explore extensions of the fiducial treatment. This includes a combined approach, through forward image simulations (Obiwan) in conjunction with neural network-based regression, to obtain an angular selection function that mitigates the imaging systematics observed in the DESI DR1 ELGs target density. We further derive a line of sight selection function from the forward model that removes the strong redshift dependence between imaging systematics and low redshift ELGs. Combining both angular and redshift-dependent systematics, we construct a three-dimensional selection function and assess the impact of all selection functions on clustering statistics. We quantify differences between these extended treatments and the fiducial treatment in terms of the measured 2-point statistics. We find that the results are generally consistent with the fiducial treatment and conclude that the differences are far less than the imaging systematics uncertainty included in DESI 2024 full-shape measurements. We extend our investigation to the ELGs at 0.6 < z < 0.8, i.e., beyond the redshift range (0.8 < z < 1.6) adopted for the DESI clustering catalog, and demonstrate that determining the full three-dimensional selection function is necessary in this redshift range. Our tests showed that all changes are consistent with statistical noise for BAO analyses indicating they are robust to even severe imaging systematics. Specific tests for the full-shape analysis will be presented in a companion paper.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2024

A post-merger enhancement only in star-forming Type 2 Seyfert galaxies: the deep learning view

ABSTRACT Supermassive black holes require a reservoir of cold gas at the centre of their host galaxy in order to accrete and shine as active galactic nuclei (AGN). Major mergers have the ability to drive gas rapidly inwards, but observations trying to link mergers with AGN have found mixed results due to the difficulty of consistently identifying galaxy mergers in surveys. This study applies deep learning to this problem, using convolutional neural networks trained to identify simulated post-merger galaxies from survey-realistic imaging. This provides a fast and repeatable alternative to human visual inspection. Using this tool, we examine a sample of ∼8500 Seyfert 2 galaxies ($L[\mathrm{O\, {\small III}}] \sim 10^{38.5 - 42}$ erg s−1) at z < 0.3 in the Sloan Digital Sky Survey and find a merger fraction of $2.19_{-0.17}^{+0.21}$ per cent compared with inactive control galaxies, in which we find a merger fraction of $2.96_{-0.20}^{+0.26}$ per cent, indicating an overall lack of mergers among AGN hosts compared with controls. However, matching the controls to the AGN hosts in stellar mass and star formation rate reveals that AGN hosts in the star-forming blue cloud exhibit a ∼2 × merger enhancement over controls, while those in the quiescent red sequence have significantly lower relative merger fractions, leading to the observed overall deficit due to the differing M*–SFR distributions. We conclude that while mergers are not the dominant trigger of all low-luminosity, obscured AGN activity in the nearby Universe, they are more important to AGN fuelling in galaxies with higher cold gas mass fractions as traced through star formation.

Avirett-Mackenzie, M. S.↗

DOE OSTI2024

Complex Structure of Molten FLiBe (2 Li F – Be F 2 ) Examined by Experimental Neutron Scattering, X-Ray Scattering, and Deep-Neural-Network Based Molecular Dynamics

The use of molten salts as coolants, fuels, and tritium breeding blankets in the next generation of fission and fusion nuclear reactors benefits from furthering the characterization of the molecular structure of molten halide salts, paving the way to predictive capability of the chemical and thermophysical properties of molten salts. Due to its neutronic, chemical, and thermochemical properties, 2 Li F - Be F 2 is a candidate molten salt for several fusion- and fission-reactor designs. We performed neutron and x-ray total-scattering measurements to determine the atomic structure of liquid 2 Li F - Be F 2 . We also performed and neural-network molecular-dynamics simulations to predict the structure obtained by neutron- and x-ray-diffraction experiments. The use of machine learning provides improvements to the efficiency in predicting the structure at a longer length scales than is achievable with simulations at significantly lower computational expense while retaining near accuracy. We found that the NNMD simulations accurately predicted the Be F 4 2 − oligomer formations seen in the experimental first-structure-factor peak. Our combination of high-resolution measurements with large-scale molecular dynamics provided an avenue to explore and experimentally verify the intermediate-range ordering beyond the first-nearest neighbor that has posed too many experimental and computational challenges in previous works. With a deeper understanding of the salt structure and ion ordering, the evolution of salt chemistry over the lifetime of a reactor can be better predicted, which is crucial to the licensing and operation of advanced fission and fusion reactors that employ molten salts. To this end, this work will serve as a reference for future studies of salt structure and macroscopic properties with and without the addition of solutes. Published by the American Physical Society 2024

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2022

Exploring far-from-equilibrium ultrafast polarization control in ferroelectric oxides with excited-state neural network quantum molecular dynamics

Ferroelectric materials exhibit a rich range of complex polar topologies, but their study under far-from-equilibrium optical excitation has been largely unexplored because of the difficulty in modeling the multiple spatiotemporal scales involved quantum-mechanically. To study optical excitation at spatiotemporal scales where these topologies emerge, we have performed multiscale excited-state neural network quantum molecular dynamics simulations that integrate quantum-mechanical description of electronic excitation and billion-atom machine learning molecular dynamics to describe ultrafast polarization control in an archetypal ferroelectric oxide, lead titanate. Far-from-equilibrium quantum simulations reveal a marked photo-induced change in the electronic energy landscape and resulting cross-over from ferroelectric to octahedral tilting topological dynamics within picoseconds. The coupling and frustration of these dynamics, in turn, create topological defects in the form of polar strings. The demonstrated nexus of multiscale quantum simulation and machine learning will boost not only the emerging field of ferroelectric topotronics but also broader optoelectronic applications.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Deeper Fluids

A framework for building and training neural network surrogates for CFD simulation, with a focus on quickly simulating volume fraction dynamics for carbon capture efficiency prediction. Augments the Deep Fluids (Kim et al., 2019) approach as described in our paper "Latent Space Simulation for Carbon Capture Design Optimization" (Bartoldson et al., 2021).

Nguyen, PhuocChanh N↗

DOE OSTI2022

Efficient Data Query for Gaussian Process Compressed Data through Value Range Estimation [Slides]

When the resolution of the data increases, data reduction methods are applied to simulation output, including Gaussian process, neural representation and compression algorithms. Lots of data analysis/visualization techniques requires data query, but data query from reduced representation is still challenging. This report will provide examples and provide possible answers to why data query from reduced representation is still challenging.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2022

1D Modeling for the Development of a Digital Twin for Hydropower Systems with Applications for a Testing Rig

Modeling and simulation constitute two important parts in constructing a sensible digital twin to mimic the dynamics of hydropower systems. Because of the physical nature of a hydropower system, the basic modeling should cover the water flow systems from the reservoir to the penstock (inlet water pipes), penstock to hydro turbine, and hydro turbine to generator and from the linkage of the hydropower systems to the grid. This report describes initial attempts to model these dynamic components, including the formulation of the linearized state space model for hydro turbine systems using the well-known six-coefficients linearization method and the formulation of the voltage and power dynamical models of a synchronous generator. To validate the accuracy of the proposed model, data collected from Norwegian University of Science and Technology were used to obtain relevant parameters for the model, and the desired simulation results were obtained. Additionally, neural network modeling and learning were also developed and applied to model the generation torque and water flow rate subsystems to demonstrate a potential learning scheme, which can be used in the development of a digital twin.

13 HYDRO ENERGY↗

DOE OSTI2023

Machine Learning-Based Regression Models for Ironmaking Blast Furnace Automation

Computational fluid dynamics (CFD)-based simulation has been the traditional way to model complex industrial systems and processes. One very large and complex industrial system that has benefited from CFD-based simulations is the steel blast furnace system. The problem with the CFD-based simulation approach is that it tends to be very slow for generating data. The CFD-only approach may not be fast enough for use in real-time decisionmaking. To address this issue, in this work, the authors propose the use of machine learning techniques to train and test models based on data generated via CFD simulation. Regression models based on neural networks are compared with tree-boosting models. In particular, several areas (tuyere, raceway, and shaft) of the blast furnace are modeled using these approaches. The results of the model training and testing are presented and discussed. The obtained R 2 metrics are, in general, very high. The results appear promising and may help to improve the efficiency of operator and process engineer decisionmaking when running a blast furnace.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

CLASS Survey Description: Coronal-line Needles in the SDSS Haystack

Coronal lines are a powerful, yet poorly understood, tool to identify and characterize active galactic nuclei. There have been few large-scale surveys of coronal lines in the general galaxy population in the literature so far. Using a novel preselection technique with a flux-to-rms ratio $\mathcal{F}$, followed by Markov Chain Monte Carlo fitting, we searched for the full suite of 20 coronal lines in the optical spectra of almost 1 million galaxies from the Sloan Digital Sky Survey Data Release 8. We present a catalog of the emission-line parameters for the resulting 258 galaxies with detections. The Coronal Line Activity Spectroscopic Survey includes line properties, host-galaxy properties, and selection criteria for all galaxies in which at least one line is detected. This comprehensive study reveals that a significant fraction of coronal-line activity is missed in past surveys based on a more limited set of coronal lines; ~60% of our sample do not display the more widely surveyed [Fe x] λ6374. In addition, we discover a strong correlation between coronal-line and Wide-field Infrared Survey Explorer W2 luminosities, suggesting that the mid-infrared flux can be used to predict coronal-line fluxes. For each line we also provide a confidence level that the line is present, generated by a novel neural network, trained on fully simulated data. We find that after training the network to detect individual lines using 100,000 simulated spectra, we achieve an overall true-positive rate of 75.49% and a false-positive rate of only 3.96%.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS1992

Inversion of snow parameters from passive microwave remote sensing measurements by a neural network trained with a multiple scattering model

Simultaneous inversion of the three parameters was performed which included mean-grain size of ice particles in snow, snow density, and snow temperatures from five brightness temperatures. Good results for the inversion of parameters were obtained using the neural network based on the simulated data computed from the dense media radiative transfer equation that takes into account the effects of multiple scattering.

Tsang, Leung↗

DOE OSTI2023

Neural networks for parameter estimation in intractable models

The goal is to use deep learning models to estimate parameters in statistical models when standard likelihood estimation methods are computationally infeasible. For instance, inference for max-stable processes is exceptionally challenging even with small datasets, but simulation is straightforward. Data from model simulations are used to train deep neural networks and learn statistical parameters from max-stable models. The proposed neural network-based method provides a competitive alternative to current approaches, as demonstrated by considerable accuracy and computational time improvements. Finally, it serves as a proof of concept for deep learning in statistical parameter estimation and can be extended to other estimation problems.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2021

Crystallization of the P 3 Sn 4 Phase upon Cooling P 2 Sn 5 Liquid by Molecular Dynamics Simulation Using a Machine Learning Interatomic Potential

We performed molecular dynamics simulations to study the crystallization of the P3Sn4 phase from P 2 Sn 5 liquid using a machine learning (ML) interatomic potential with desirable efficiency and accuracy. Our results capture the liquid properties of P 2 Sn 5 at 1300 K, which is well above the melting temperature. The phase separation and crystallization are observed when P 2 Sn 5 liquid is cooled down below 832 and 505 K, respectively. The simulation results are in good agreement with the experimentally observed phase transformation behaviors and provide useful insights into the complex nucleation and crystallization process at the details of atomistic scale. Our work also demonstrated that ML interatomic potentials based on neural network deep learning are robust and capable of accurately describing the energetics and kinetics of complex materials through molecular dynamics simulations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2026

WellPINN: Accurate Well Representation for Transient Fluid Pressure Diffusion in Subsurface Reservoirs With Physics‐Informed Neural Networks

Accurate representation of pumping wells is essential for reliable reservoir characterization and simulation of operational scenarios in subsurface flow models. Physics-informed neural networks (PINNs) are emerging as a promising alternative to numerical models for reservoir modeling, offering seamless integration of monitoring data and governing physical equations. However, existing PINN-based studies face major challenges in capturing fluid pressure near wells when using a source/sink term, particularly during the early stages after pumping begins. We address this problem by introducing WellPINN, a workflow in which an initially trained PINN infers fluid pressure across the entire reservoir domain using a large equivalent well radius. This initial PINN solution is then locally refined around the well by a set of subdomain PINNs that are trained for smaller equivalent well radii. Continuity across these subdomain interfaces as well as at the initial condition is ensured by hard-constraining each PINN on its subdomain boundary. Our results demonstrate WellPINN as the first workflow of its kind to focus on accurate inference of fluid pressure from pumping rates throughout the entire injection period, significantly advancing the potential of PINNs for inverse modeling and operational scenario simulations. All data and code for this paper are openly available at https://doi.org/10.20350/DIGITALCSIC/17260.

58 GEOSCIENCES↗

DOE OSTI2020

Deep learning-based model for progress variable dissipation rate in turbulent premixed flames

A deep neural network (DNN) based large eddy simulation (LES) model for progress variable dissipation rate in turbulent premixed flames is presented. The DNN model is trained using filtered data from direct numerical simulations (DNS) of statistically planar turbulent premixed flames with n-heptane as fuel. Training data was comprised of flames with varying turbulence levels leading to a range of Karlovitz numbers. Through a-priori tests the DNN model is shown to predict the subfilter contribution to progress variable dissipation rate accurately over a range of filter widths and for all Karlovitz numbers examined in this study. Superior performance of the DNN model relative to an established physics-based model is also demonstrated. Additionally, transferability of the DNN model is highlighted by a-priori evaluation of the model using filtered DNS data from multiple cases with different Karlovitz numbers and fuel species than those that were used for training the model.

33 ADVANCED PROPULSION SYSTEMS↗

DOE OSTI2022

Downscaling atmospheric chemistry simulations with physically consistent deep learning

Abstract. Recent advances in deep convolutional neural network (CNN)-based super resolution can be used to downscale atmospheric chemistry simulations with substantially higher accuracy than conventional downscaling methods. This work both demonstrates the downscaling capabilities of modern CNN-based single image super resolution and video super-resolution schemes and develops modifications to these schemes to ensure they are appropriate for use with physical science data. The CNN-based video super-resolution schemes in particular incur only 39 % to 54 % of the grid-cell-level error of interpolation schemes and generate outputs with extremely realistic small-scale variability based on multiple perceptual quality metrics while performing a large (8×10) increase in resolution in the spatial dimensions. Methods are introduced to strictly enforce physical conservation laws within CNNs, perform large and asymmetric resolution changes between common model grid resolutions, account for non-uniform grid-cell areas, super-resolve lognormally distributed datasets, and leverage additional inputs such as high-resolution climatologies and model state variables. High-resolution chemistry simulations are critical for modeling regional air quality and for understanding future climate, and CNN-based downscaling has the potential to generate these high-resolution simulations and ensembles at a fraction of the computational cost.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Enhanced physics-constrained deep neural networks for modeling vanadium redox flow battery

Numerical simulation has become indispensable in advancing cost-effective process optimization and control of flow batteries. We propose an enhanced version of the physics-constrained deep neural network (PCDNN) approach to provide high-accuracy voltage predictions in the vanadium redox flow batteries (VRFBs). The purpose of the PCDNN approach is to enforce the physics-based zero-dimensional (0D) VRFB model in a neural network to assure model generalization for various battery operation conditions. However, limited by the simplifications of the 0D model, the PCDNN cannot capture sharp voltage changes in the extreme SOC regions. To improve the accuracy of voltage prediction at extreme ranges, we introduce a second (enhanced) DNN to mitigate the prediction errors carried from the 0D model itself and call the resulting approach enhanced PCDNN (ePCDNN). By comparing with experimental data, we demonstrate that the ePCDNN approach can accurately capture the voltage response throughout the charge–discharge cycle, including the tail region of the voltage discharge curve. The loss function for training the ePCDNN is designed to be flexible by adjusting the weights of the physics-constrained DNN and the enhanced DNN. In conclusion, this allows the ePCDNN framework to be transferable to battery systems with variable physical model fidelity.

25 ENERGY STORAGE↗

DOE OSTI2022

Modeling the Solvation and Acidity of Carboxylic Acids Using an Ab Initio Deep Neural Network Potential

Formic and acetic acid constitute the simplest of carboxylic acids, yet they exhibit fascinating chemistry in the condensed phase such as proton transfer and dimerization. The go-to method of choice for modeling these rare events have been accurate but expensive ab-initio molecular dynamics simulations. Here, we present a deep neural network potential trained using accurate ab-initio data that can be used in tandem with enhanced-sampling methods to perform an efficient exploration of the free-energy surface of aqueous solutions of weak carboxylic acids. In particular, we show that our model captures proton dissociation and provides a good estimate of the pK a , as well as the dimerization of formic and acetic acid. This provides a suitable starting point for applications in different research areas where computational efficiency coupled with the accuracy of ab-initio methods is required.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗