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At least 397 records · Page 22

Optimizing process-based models to predict current and future soil organic carbon stocks at high-resolution

From hillslope to small catchment scales (< 50 km 2 ), soil carbon management and mitigation policies rely on estimates and projections of soil organic carbon (SOC) stocks. Here we apply a process-based modeling approach that parameterizes the MIcrobial-MIneral Carbon Stabilization (MIMICS) model with SOC measurements and remotely sensed environmental data from the Reynolds Creek Experimental Watershed in SW Idaho, USA. Calibrating model parameters reduced error between simulated and observed SOC stocks by 25%, relative to the initial parameter estimates and better captured local gradients in climate and productivity. The calibrated parameter ensemble was used to produce spatially continuous, high-resolution (10 m 2 ) estimates of stocks and associated uncertainties of litter, microbial biomass, particulate, and protected SOC pools across the complex landscape. Here, subsequent projections of SOC response to idealized environmental disturbances illustrate the spatial complexity of potential SOC vulnerabilities across the watershed. Parametric uncertainty generated physicochemically protected soil C stocks that varied by a mean factor of 4.4 × across individual locations in the watershed and a – 14.9 to + 20.4% range in potential SOC stock response to idealized disturbances, illustrating the need for additional measurements of soil carbon fractions and their turnover time to improve confidence in the MIMICS simulations of SOC dynamics.

54 ENVIRONMENTAL SCIENCES↗

Multi-scale experimental study of creep-fatigue failure initiation in a 709 Stainless Steel alloy using high resolution digital image correlation. Final report

This report discusses the efforts made towards the multi-scale study of the creep-fatigue response of stainless steel 709. Multiple experimental techniques, including digital image correlation (DIC) and electron backscatter diffraction (EBSD), were used in assessing the evolution of damage accumulation during fatigue, creep-fatigue, and thermomechanical fatigue of alloy 709. The role of microstructural features, hold times, temperature, and loading profiles were quantified and the interchangeability of temperature and time was investigated. Finally, a thermomechanical fatigue model was shown to predict well the failure of samples with varying loading profiles. Results indicate that strain accumulation in 709 steel happens primarily near grain boundaries (GBs) with the strains around GBs being inversely proportional to their measured residual burgers vector. Furthermore, hot-spots for strain accumulation were shown to be the locations of eventual microcrack nucleation. The introduction of hold times to the periodic loading cycle increases the damage accumulation rate and thus shortens the fatigue life of samples–this was true for both room temperature and high temperature. Thermomechanical cycling was shown to have little effect on the end life of samples, with the damage accumulation rate for in-phase and out-of-phase cycling being similar to isothermal fatigue. The interchangeability of time and temperature was shown to be possible within the studied load, time, and temperature ranges, since deformation mechanisms driving strain accumulation did not change with temperature (up to 650°C). The Neu-Sehitoglu thermomechanical fatigue model, with constants obtained from the literature and in part from our experimental results, was applied to predict failure of isothermal creep-fatigue samples. The main objectives of this work were to:(a) Perform high-resolution digital image correlation measurements (HiDIC) for alloy 709; (b) Quantify and assess damage accumulation at the microstructure under fatigue, TMF, and creep-fatigue conditions of 709; (c) Study of the role of hold times, i.e., adding a creep component, to: Room temperature cycling, High temperature cycling, Failure; (d) Study the mechanisms of thermomechanical fatigue in this alloy; (e) Investigate the existence of a time-temperature interchangeability criterion to aid in accelerated creep-fatigue testing; (f) Establish the validity of a combined creep-fatigue model for life prediction for 709. This report is structured with each subsequent section detailing the efforts, results, and conclusions related to each of the objectives described, mostly in chronological order.

36 MATERIALS SCIENCE↗

High-resolution leaf area index maps generated from unoccupied aerial system, Teller Mile 27, Seward Peninsula, Alaska

Leaf area index (LAI), a measure of the amount of one-side leaf area per ground unit, is an important indicator of plant carbon, energy, and water cycle. In the heterogeneous Arctic landscapes, it has been challenging to accurately measure LAI across species and space needed for Earth system model validation. Here, we use multispectral unoccupied aerial systems (UASs) to scale up and map leaf area index (LAI) , in a low-Arctic tundra landscape on the Seward Peninsula, Alaska. We linked previous published LAI measurements with high-resolution, UAS-collected multispectral data collected over the region of Next Generation Ecosystem Experiments in the Arctic (NGEE Arctic)’s Teller Mile Maker 27 site in 2022 to develop random forest (RF) machine learning models to predict and map LAI. 100 RF models were developed to account for uncertainties in ground LAI plot measurements and process scaling. This dataset includes a raster (*.tif) map of the mean LAI value of the 100 RF models, a raster (*.tif) map of the standard deviation of the RF-modeled LAI data, and a user guide (*.pdf).

54 ENVIRONMENTAL SCIENCES↗

Identification and Analysis of Backwater Nursery Habitats in the Middle Green River, Utah, during 2014, 2017, and 2018 Using High-Resolution Optical Remotely Sensed Imagery

Low-velocity channel-margin habitats, known as backwaters, serve as important nursery habitats for the endangered Colorado pikeminnow (Ptychocheilus lucius) in the middle Green River between Jensen and Ouray, Utah. The backwater synthesis report for the 1987–2013 period (Grippo et al. 2017) reported a decreased number of backwaters per river mile (RM) and an increased mean backwater size across the middle Green River. Information about backwaters is critical for understanding habitat characteristics that are important for Colorado pikeminnow recruitment. The goal of this study was to determine backwater number and size in the middle Green River using high-resolution imagery for 2018 to add to our understanding of long-term trends of backwater habitat availability across the reach. For comparative analysis of backwater habitats between 2004 and 2018, information for 2004, 2006, 2013, 2014 and 2017 from our previous studies was also utilized (Grippo et al. 2017; Hamada et al. 2017, 2021, and in review). Across the 2004, 2006, 2013, 2014, 2017, and 2018 study years, mean daily flow at the Jensen gage during image collection ranged from 1,220 cfs (2004) to 2,940 cfs (2014), which was approximately 140% greater in 2014 than in 2004. The number of delineated backwaters ranged from 88 (2013) to 245 (2017), and total backwater area ranged from 118,938 m 2 (2006) to 209,611 m 2 (2014). Mean backwater size ranged from 822 m 2 (2017) to 1,508 m 2 (2018), but there was considerable variability in backwater size for each of the study years. Backwater areas differed significantly among the study years based on a Kruskal-Wallis Rank Sum test ( P < 0.001). Pairwise Wilcoxon tests indicated that the median backwater areas in 2017 and 2014 were significantly lower than in the other sample years ( P ≤ 0.05), even though these years had the highest total backwater area. 2018 had the greatest median backwater area, although the distribution of backwater area values was not statistically different from backwater areas measured in 2013 ( P > 0.05). These two years also had the lowest maximum backwater area values among all sample years. The distribution of backwater area values was not significantly different ( P > 0.05) among the 2006, 2004, and 2013 sample years.

54 ENVIRONMENTAL SCIENCES↗

High-resolution Bayesian spatial autocorrelation (SPAC) quasi-3-D Vs model of Utah FORGE site with a dense geophone array

SUMMARY We expand the application of spatial autocorrelation (SPAC) from typical 1-D Vs profiles to quasi-3-D imaging via Bayesian Monte Carlo inversion (BMCI) using a dense nodal array (49 nodes) located at the Utah Frontier Observatory for Research in Geothermal Energy (FORGE) site. Combinations of 4 and 9 geophones in subarrays provide for 36 and 25 1-D Vs profiles, respectively. Profiles with error bars are determined by calculating coherency functions that fit observations in a frequency range of 0.2–5 Hz. Thus, a high-resolution quasi-3-D Vs model from the surface to 2.0 km depth is derived and shows that surface-parallel sedimentary strata deepen to the west, consistent with a 3-D seismic reflection survey. Moreover, the resulting Vs profile is consistent with a Vs profile derived from distributed acoustic sensing (DAS) data located in a borehole at the FORGE site. The quasi-3-D velocity model shows that the base of the basin dips ∼22° to the west and topography on the basement interface coincident with the Mag Lee Wash suggests that the bedrock interface is an unconformity.

Geochemistry & Geophysics↗

Global urban growth between 1870 and 2100 from integrated high resolution mapped data and urban dynamic modeling

Long term, global records of urban extent can help evaluate environmental impacts of anthropogenic activities. Remotely sensed observations can provide insights into historical urban dynamics, but only during the satellite era. Here, we develop a 1 km resolution global dataset of annual urban dynamics between 1870 and 2100 using an urban cellular automata model trained on satellite observations of urban extent between 1992 and 2013. Hindcast (1870–1990) and projected (2020–2100) urban dynamics under the five Shared Socioeconomic Pathways (SSPs) were modeled. We find that global urban growth under SSP5, the fossil-fuelled development scenario, was largest with a greater than 40-fold increase in urban extent since 1870. The high resolution dataset captures grid level urban sprawl over 200 years, which can provide insights into the urbanization life cycle of cities and help assess long-term environmental impacts of urbanization and human–environment interactions at a global scale.

54 ENVIRONMENTAL SCIENCES↗

Rapid High-Resolution Analysis of Polysaccharide-Lignin Interactions in Secondary Plant Cell Walls Using Proton-Detected Solid-State NMR

The plant secondary cell wall, a complex matrix composed of cellulose, hemicellulose, and lignin, is crucial for the mechanical strength and water-proofing properties of plant tissues, and serves as a primary source of biomass for biorenewable energy and biomaterials. Structural analysis of these polymers and their interactions within the secondary cell wall has been heavily relying on 13 C-based solid-state NMR techniques. In this study, we explore the application of 1 H-detected solid-state NMR techniques for rapid, high-resolution structural characterization of polysaccharides and lignin, demonstrated on the stems of hardwood eucalyptus. We explored the use of synthesized 2D spectra to resolve central 1 H resonances and the combined application of 3D hCCH and hCHH experiments for complete resonance assignment and unambiguous identification of lignin-carbohydrate interactions. Our findings emphasize the central role of acetylated three-fold xylan conformers, rather than two-fold, in stabilizing the carbohydrate-lignin interface, with glucuronic acid sidechains in eucalyptus glucuronoxylan colocalizing with lignin, revised cellulose-lignin interactions involving uncoated microfibril surfaces, and pectin-lignin interactions indicative of early-stage lignification. These results present a novel approach for rapid structural analysis of lignocellulosic biomaterials without the need for solubilization or extraction.

09 BIOMASS FUELS↗

A High‐Resolution Tropical Mesoscale Convective System Reanalysis (TMeCSR)

Abstract Modern global reanalysis products have greatly accelerated meteorological research in synoptic‐to‐planetary‐scale phenomena. However, their use in studying tropical mesoscale convective systems (MCSs) and their regional‐to‐global impact has mostly been limited to supplying initial and boundary conditions for MCS‐resolving simulations and providing information about the large‐scale environments of MCSs. These limitations are due to difficulties in resolving tropical MCS dynamics in the relatively low‐resolution global models and that tropical MCSs often occur over poorly observed regions. In this work, a Tropical MCS‐resolving Reanalysis product (TMeCSR) was created over a region with frequent tropical MCSs. This region spans the tropical Indian Ocean, tropical continental Asia, Maritime Continent, and Western Pacific. TMeCSR is produced by assimilating all‐sky infrared radiances from geostationary satellites and other conventional observations into an MCS‐resolving regional model using the Ensemble Kalman Filter. The resulting observation‐constrained high‐resolution (9‐km grid spacing) data set is available hourly during the boreal summer (June‐August) of 2017, during which widespread severe flooding occurred. Comparisons of TMeCSR and European Center for Medium Range Weather Forecast Reanalysis version 5 (ERA5) against independent satellite retrievals indicate that TMeCSR's cloud and multiscale rain fields are better than those of ERA5. Furthermore, TMeCSR better captured the diurnal variability of rainfall and the statistical characteristics of MCSs. Forecasts initialized from TMeCSR also have more accurate rain and clouds than those initialized from ERA5. The TMeCSR and ERA5 forecasts have similar performances with respect to sounding and surface observations. These results indicate that TMeCSR is a promising MCS‐resolving data set for tropical MCS studies.

Chan, Man‐Yau↗

High-resolution mapping of spatial heterogeneity in ice wedge polygon geomorphology near Prudhoe Bay, Alaska

It is well known that microtopography associated with ice wedge polygons drives pronounced, meter-scale spatial gradients in hydrologic and ecological processes on the tundra. However, highresolution maps of polygonal geomorphology are rarely available, due to the complexity and subtlety of ice wedge polygon relief at landscape scales. Here we present a sub-meter resolution map of >106 discrete ice wedge polygons across a ~1200 km2 landscape, delineated within a lidar-derived digital elevation model. The delineation procedure relies on a convolutional neural network paired with a set of common image processing operations and permits explicit measurement of relative elevation at the center of each ice wedge polygon. The resulting map visualizes meter- to kilometer-scale spatial gradients in polygonal geomorphology across an extensive landscape with unprecedented detail. This high-resolution inventory of polygonal geomorphology provides rich spatial context for extrapolating observations of environmental processes across the landscape. The map also represents an extensive baseline dataset for quantifying contemporary land surface deformation (i.e., thermokarst) at the survey area, through future topographic surveys.

54 ENVIRONMENTAL SCIENCES↗

High resolution measurements reveal abiotic and biotic mechanisms of elevated nitric oxide emission after wetting dry soil

Wetting dry soil triggers emission of nitric oxide (NO), which can harm air quality and influence ecosystem N balance. NO released after wetting may be derived from two primary mechanisms: (1) abiotic decomposition of nitrite (NO 2 -) present in the dry soil and (2) biologically-mediated production of NO. The relative contributions of these mechanisms to NO emission are challenging to partition. To differentiate the two mechanisms, we made continuous observations of NO emission from a range of soils that varied in texture, pH, and exchangeable cations. Additionally, we coupled NO gas exchange measurements with automated, non-destructive high-resolution sampling of inorganic N species via microdialysis. We identified two distinct phases of NO production (1) an initial phase that reached its maximum less than 30 min after rewetting; and (2) a second phase lasting up to 36 h. The magnitude of the initial phase of NO production was correlated with the initial nitrous acid concentration (calculated from NO 2 - concentrations and soil pH) and soil exchangeable calcium. The second phase of NO emission coincided with a peak in NO 2 - that preceded NO 3 - accumulation. Together, these results suggest that NO emissions following wetting are defined by an initial pulse of abiotic NO formation mediated by soil acidity at mineral surfaces, followed by a prolonged pulse of NO emission driven by a lag between the biological processes of ammonia oxidation and nitrite oxidation. These results can inform mechanistic models of NO emissions from soils to improve predictions of the terrestrial N cycle and atmospheric chemistry.

54 ENVIRONMENTAL SCIENCES↗

Understanding important features of deep learning models for segmentation of high-resolution transmission electron microscopy images

Cutting edge deep learning techniques allow for image segmentation with great speed and accuracy. However, application to problems in materials science is often difficult since these complex models may have difficultly learning meaningful image features that would enable extension to new datasets. In situ electron microscopy provides a clear platform for utilizing automated image analysis. In this work, we consider the case of studying coarsening dynamics in supported nanoparticles, which is important for understanding, for example, the degradation of industrial catalysts. By systematically studying dataset preparation, neural network architecture, and accuracy evaluation, we describe important considerations in applying deep learning to physical applications, where generalizable and convincing models are required. With a focus on unique challenges that arise in high-resolution images, we propose methods for optimizing performance of image segmentation using convolutional neural networks, critically examining the application of complex deep learning models in favor of motivating intentional process design.

36 MATERIALS SCIENCE↗

High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules

Flaviviruses such as Zika (ZIKV) and dengue virus (DENV) are positive-sense RNA viruses belonging to Flaviviridae. The flavivirus genome contains a 5’ end stem-loop promoter sequence known as stem-loop A (SLA) that is recognized by the flavivirus polymerase NS5 during viral RNA synthesis and 5’ guanosine cap methylation. The crystal structures of ZIKV and DENV SLAs show a well-defined fold, consisting of a bottom stem, side loop, and top stem-loop, providing unique interaction sites for small-molecule inhibitors to disrupt the promoter function. To facilitate identification of small molecule binding sites in flavivirus SLA, we determined high-resolution structures of bottom and top stems of ZIKV SLA, which contain a single U- or G-bulge, respectively. Both bulge nucleotides exhibit multiple orientations, from folded back on the adjacent nucleotide to flipped out of the helix, and are stabilized by stacking or base triple interactions. These structures suggest that even a single unpaired nucleotide can provide flexibility to RNA structures and its conformation is mainly determined by the stabilizing chemical environment. To facilitate discovery of small molecule inhibitors that interfere with the functions of ZIKV SLA, we screened and identified compounds that bind to the bottom and top stems of ZIKV SLA.

Biochemistry & Molecular Biology↗

Integrating very-high-resolution UAS data and airborne imaging spectroscopy to map the fractional composition of Arctic plant functional types in Western Alaska

Widespread changes in vegetation cover and composition are driving strong impacts on Arctic ecosystem functioning and global climate feedbacks. An accurate characterization of tundra vegetation composition is required to understand how the Arctic will respond to future climate change. However, quantifying tundra vegetation composition over large areas is challenging as commonly-used satellite observations are too coarse, spatially and spectrally, to differentiate low-lying tundra vegetation types. Recent airborne and spaceborne imaging spectroscopy platforms provide better data to characterize vegetation composition. Yet, our ability to characterize vegetation composition with imaging spectroscopy remains largely unexplored in the Arctic, particularly due to a lack of ground observations needed to train and test classification models. To address this problem, we collected very-high-resolution (VHR, ~5 cm) unoccupied aerial system (UAS) imagery at three low-Arctic tundra sites located on the Seward Peninsula, western Alaska. In this paper, we examine the feasibility of integrating imagery from the UAS and the hyperspectral Airborne Visible/Infrared Imaging Spectrometer, Next Generation (AVIRIS-NG) airborne instrument to map the fractional composition of 12 key Arctic plant functional types (PFTs). To this end, we first mapped the 12 PFTs from our VHR UAS imagery using random forest classification. We then used these UAS-derived PFT maps as ground truth to develop partial least squares regression (PLSR) models to predict the fractional cover (FCover) of each PFT from AVIRIS-NG imagery. Further, we evaluated the performance of our PLSR models using reserved UAS samples, as well as by mapping PFT FCover and dominant PFT for large tundra landscapes. Our results show that 1) Arctic PFTs can be effectively mapped using VHR UAS imagery, with overall accuracy between 86% and 92%, 2) when the UAS mapped PFTs were used to inform PLSR scaling models, the FCover of the 12 PFTs could be effectively estimated from AVIRIS-NG imagery with a mean absolute error (MAE) <0.13, and 3) our PLSR models outperformed traditional, fully constrained least-squares (FCLS) linear mixture analysis and produced high-quality, spatially contiguous PFT FCover and PFT maps that captured vegetation spatial patterns with similar accuracy to those developed from UAS imagery. The developed PLSR models have the potential to be broadly applied for quantifying vegetation composition with AVIRIS-NG images to help monitor tundra vegetation dynamics and improve process-based modeling of tundra ecosystems.

54 ENVIRONMENTAL SCIENCES↗

A Review of Computational Capabilities and Requirements in High-Resolution Simulation of Nonferrous Pyrometallurgical Furnaces

We report that tremendous progress has been made over the last several decades in improving the pyrometallurgical processing routes of nonferrous metals, such as aluminum, copper, and lead. Advances in the numerical modeling of pyrometallurgical processes has aided in these improvements by providing a better understanding of the complex transport phenomena occurring in modern furnaces. However, there is a need for a comprehensive discussion of the numerical modeling of a primary and a secondary nonferrous pyrometallurgical furnaces. This review provides such a discussion by surveying recent attempts at capturing the physico-chemical phenomena occurring within these furnaces, including gas-phase combustion, melting/smelting, and multiphase heat- and mass-transfer with the molten phases. This work then identifies a complete set of approaches for simulating these types of furnaces and provides recommendations for applying high-resolution numerical tools towards full-furnace simulation. By identifying gaps in the current state of the art, this review offers suggestions for future developments in commercial codebases, outlining the path to fulfilling the promise of CFD-enabled pyrometallurgy.

36 MATERIALS SCIENCE↗

High-resolution lithospheric structure of continental China from joint inversion of surface wave and gravity data

The lithospheric structure of continental China has been previously determined by seismic travel time tomography, surface wave tomography, and joint inversion of body wave and surface wave data. However, due to the inherent limitations of seismic data, the lithospheric structure of continental China is still not well resolved in the shallow part and in some regions where the station coverage is relatively sparse. In this study, we aim at improving the lithospheric structure by joint inversion of seismic surface wave data and satellite gravity data to take advantage of the uniform distribution and complementary strength of the gravity data. Here, the empirical relationship between velocity and density is used as a bridge for joint inversion of surface wave and gravity data. The joint inversion shear-wave velocity Vs (density) model, named as USTClitho1.0g, can fit both surface wave and gravity data well. This high-resolution Vs model can better fit the active airgun source seismic arrival times and better delineate some features in continental China, such as the velocity contrast across the north–south gravity lineament (NSGL), the lithosphere thinning in eastern China, the crustal footprint of the Hainan mantle plume, the likely magma chamber beneath volcanos in northeast China, the middle-lower crust low velocity layer beneath the Tibetan plateau, and the tearing of subducted Indian mantle lithosphere. Our joint inversion Vs model can provide a reference model for geosciences in continental China and surrounding areas.

58 GEOSCIENCES↗

Integrating Very-High-Resolution UAS Data and Airborne Imaging Spectroscopy to Map the Fractional Composition of Arctic Plant Functional Types in Western Alaska: Supporting Data

Remote sensing maps of plant functional type (PFT) fractional cover (FCover), dominant PFT, and FCover uncertainty derived from NASA's Airborne Visible / Infrared Imaging Spectrometer - Next Generation (AVIRIS-NG). The AVIRIS-NG imaging spectroscopy data (380-2510 nm) was collected as a part of the collaboration between NASA's Arctic-Boreal Vulnerability Experiment (ABoVE; Miller et al., 2019) and DOE's Next Generation Ecosystem Experiment in the Arctic (NGEE-Arctic). This package includes maps of the NGEE-Arctic Council watershed on the Seward Peninsula, Alaska, created using AVIRIS-NG imagery collected on July 9th, 2019. The map data and metadata are provided as GeoTIFF (*.tif), ENVI image (*.dat), and text (*.txt, *hdr) formats. Additional map quicklooks are provided as *.pdf files and GIS *.kml files. These datasets are provided in support of Yang et al., (2023), "Integrating Very-High-Resolution UAS Data and Airborne Imaging Spectroscopy to Map the Fractional Composition of Arctic Plant Functional Types in Western Alaska".The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

High-Resolution Frequency-Domain Spectroscopic and Modeling Studies of Photosystem I (PSI), PSI Mutants and PSI Supercomplexes

Photosystem I (PSI) is one of the two main pigment–protein complexes where the primary steps of oxygenic photosynthesis take place. This review describes low-temperature frequency-domain experiments (absorption, emission, circular dichroism, resonant and non-resonant hole-burned spectra) and modeling efforts reported for PSI in recent years. In particular, we focus on the spectral hole-burning studies, which are not as common in photosynthesis research as the time-domain spectroscopies. Experimental and modeling data obtained for trimeric cyanobacterial Photosystem I (PSI 3 ), PSI 3 mutants, and PSI 3 –IsiA 18 supercomplexes are analyzed to provide a more comprehensive understanding of their excitonic structure and excitation energy transfer (EET) processes. Detailed information on the excitonic structure of photosynthetic complexes is essential to determine the structure–function relationship. We will focus on the so-called “red antenna states” of cyanobacterial PSI, as these states play an important role in photochemical processes and EET pathways. The high-resolution data and modeling studies presented here provide additional information on the energetics of the lowest energy states and their chlorophyll (Chl) compositions, as well as the EET pathways and how they are altered by mutations. We present evidence that the low-energy traps observed in PSI are excitonically coupled states with significant charge-transfer (CT) character. The analysis presented for various optical spectra of PSI 3 and PSI 3 -IsiA 18 supercomplexes allowed us to make inferences about EET from the IsiA 18 ring to the PSI 3 core and demonstrate that the number of entry points varies between sample preparations studied by different groups. In our most recent samples, there most likely are three entry points for EET from the IsiA 18 ring per the PSI core monomer, with two of these entry points likely being located next to each other. Therefore, there are nine entry points from the IsiA 18 ring to the PSI 3 trimer. We anticipate that the data discussed below will stimulate further research in this area, providing even more insight into the structure-based models of these important cyanobacterial photosystems.

59 BASIC BIOLOGICAL SCIENCES↗

Predicting High‐Resolution Spatial and Spectral Features in Mass Spectrometry Imaging with Machine Learning and Multimodal Data Fusion

Recent advancements in molecular Mass Spectrometry Imaging have sparked interest in integrating high spatial resolution methods with molecular mass-spectrometry-based chemical imaging. Fusion-based algorithms have proven effective in generating high spatial-resolution molecular mass spectra. However, a significant challenge stems from the differing physical mechanisms underlying image generation and data upsampling techniques, potentially leading to discrepancies in integrated information channels. Integrating physical constraints into data processing workflows is essential to tackle this issue. In this study, we propose an innovative approach that merges data from Fourier transform ion cyclotron resonance (FTICR), time-of-flight matrix-assisted laser desorption/ionization, and time-of-flight secondary ion mass spectrometry imaging techniques. By leveraging FT-ICR's unparalleled spectral resolution and ToF-SIMS's exceptional spatial resolution, we achieve submicron spatial resolution, enabling the observation of intact molecular species with remarkable spectral precision. Canonical correlation analysis is employed to incorporate physical constraints. Through sophisticated image processing and machine learning techniques, the results of this fusion hold significant promise for advancing our comprehension of complex systems and unveiling concealed molecular intricacies.

canonical correlation analysis↗