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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 397 records · Page 22

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NASA NTRS1990

Concurrent processing adaptation of aeroelastic analysis of propfans

This paper reports on a study involving the adaptation of an advanced aeroelastic analysis program to run concurrently on a shared memory multiple processor computer. The program uses a three-dimensional compressible unsteady aerodynamic model and blade normal modes to calculate aeroelastic stability and response of propfan blades. The identification of the computational parallelism within the sequential code and the scheduling of the concurrent subtasks to minimize processor idle time are discussed. Processor idle time in the calculation of the unsteady aerodynamic coefficients was reduced by the simple strategy of appropriately ordering the computations. Speedup and efficiency results are presented for the calculation of the matched flutter point of an experimental propfan model. The results show that efficiencies above 70 percent can be obtained using the present implementation with 7 processors. The parallel computational strategy described here is also applicable to other aeroelastic analysis procedures based on parallel methods.

Murthy, Durbha V.↗

NASA NTRS1992

Concurrent processing adaptation of aeroelastic analysis of propfans

Discussed here is a study involving the adaptation of an advanced aeroelastic analysis program to run concurrently on a shared memory multiple processor computer. The program uses a three-dimensional compressible unsteady aerodynamic model and blade normal modes to calculate aeroelastic stability and response of propfan blades. The identification of the computational parallelism within the sequential code and the scheduling of the concurrent subtasks to minimize processor idle time are discussed. Processor idle time in the calculation of the unsteady aerodynamic coefficients was reduced by the simple strategy of appropriately ordering the computations. Speedup and efficiency results are presented for the calculation of the matched flutter point of an experimental propfan model. The results show that efficiencies above 70 percent can be obtained using the present implementation with 7 processors. The parallel computational strategy described here is also applicable to other aeroelastic analysis procedures based on panel methods.

Murthy, D. V.↗

NASA NTRSDate not supplied

One-Carbon Metabolism and SANS 2022 Update

Spaceflight Associated Neuro-ocular Syndrome, or SANS, affects a subset of astronauts (1, 2), and biochemical evidence has documented differences in those astronauts (3). Specifically, they had higher circulating concentrations of metabolites of the one-carbon metabolic pathway (1C), including homocysteine, and these concentrations were higher before flight (3). After ruling out many potential confounding factors in these otherwise healthy individuals (e.g., sex, kidney function, vitamin status, coffee consumption), a study of genetics was warranted. In an initial pilot effort, we documented a genetic predisposition to develop ophthalmic changes after long-duration space flight (4). That is, from a limited study of 5 single-nucleotide polymorphisms (SNPs), we found that the G allele for the MTRR A66G SNP was associated with a greater risk of choroidal folds and cotton-wool spots after flight, and the C allele for SHMT1 C1420T was protective against optic disc edema (4). These data provide a potential pathway for understanding why some individuals develop SANS, while others do not. The initial pilot study of 5 SNPs yielded striking findings, but the 1C pathway is far more complex. An effort was undertaken to examine more than 500 1C SNPs to see if a broader examination could help illuminate this association. That work is ongoing. The astronaut findings led us to advocate for the inclusion of 1C pathway genetic and biochemistry testing on other SANS-related projects, noting that genetics might help identify responders, non-responders, or outliers. The first such effort yielded evidence of an association of specific forms of the MTRR and SHMT-1 SNPs and vitamin B12 status with end-tidal CO2 after acute carbon dioxide exposure (5). The second such effort led to the identification that individuals exposed to strict head-down tilt and CO2 for 30-d who developed optic disc edema also had risk alleles for the two SNPs described above (6). Additionally, we identified a clinical population with many characteristics either attributed or purported to be involved in the ocular changes seen in affected astronauts: women with polycystic ovary syndrome (PCOS). PCOS is a condition of androgen excess and anovulatory menstrual cycles. The shared characteristics and clinical findings between SANS and PCOS generally include higher circulating homocysteine concentrations, increased retinal nerve fiber layer thickness, increased androgen concentrations (or responses), and altered carbohydrate metabolism. To our knowledge, no study has examined whether women with PCOS have asymptomatic ophthalmic anomalies observed in astronauts with SANS. While researchers have evaluated the one-carbon metabolism pathway polymorphisms of PCOS patients, and initial studies show an association with certain one-carbon polymorphisms, none have looked at the set of SNPs identified in our studies that are associated with ophthalmic changes in astronauts. Accordingly, we designed a study to evaluate the association of one-carbon pathway SNPs and ophthalmic findings in patients with PCOS and/or IIH compared to controls. Subjects provided blood samples for vitamin and one carbon biochemistry analyses, an extensive analysis of >500 SNPs associated with one carbon metabolism and had eye examinations and ocular imaging. Data analysis are underway. The data collected to date have shown associations between one carbon pathway biochemistry and genetics and incidence of SANS. The mechanisms for SANS has yet to be identified, although many hypotheses exist. Based on our data, we have developed (8, 9) and expanded (6) a multi-hit hypothesis for how these seemingly disparate findings could be linked. While intriguing, the hypothesis represents the starting point for further research. We aim to clarify the relationship between B-vitamin status and genetics with regard to the risk of SANS. Ultimately, understanding the mechanism(s) behind this will provide a means to predict, prevent, or treat these ophthalmologic pathologies in astronauts, and terrestrial populations.

S M Smith↗

DOE OSTI2023

Did you know the Lab and its first director share a birthday month? A look back at Oppenheimer’s wartime legacy through historical items in our collections

Many birthdays ago, at only 38 years old and with no previous administrative experience, J. Robert Oppenheimer accepted responsibility for a national security mission of unprecedented scale. His charge, handed down by Manhattan Project director General Leslie R. Groves, was to lead a team of the world’s foremost scientific minds in developing the first atomic bomb. Under Oppenheimer’s leadership, a community of over 6,000 scientists, engineers, and other personnel living and working at the top-secret lab in Los Alamos completed their task in only 27 months, delivering the world’s first two atomic weapons to the U.S. military. In honor of what would have been Oppenheimer’s 119th birthday (on April 22), the National Security Research Center remembers his contributions as an administrator and scientist and the scope of his legacy as the first director of the Lab through items in our unclassified collections.

99 GENERAL AND MISCELLANEOUS↗

DOE OSTI2023

Towards understanding the robust strengthening of ENSO and more frequent extreme El Niño events in CMIP6 global warming simulations

The El Niño Southern Oscillation (ENSO) has profound impacts on weather patterns across the globe, yet there is no consensus on its response to global warming. Several modelling studies find a stronger ENSO in global warming scenarios, while other studies suggest ENSO weakening. Using a broad range of models from the Coupled Model Intercomparison Project phase 6 (CMIP6) and four types of warming experiments, here we show that the majority of the models predict a stronger ENSO by century-end in Shared Social Pathway (SSP) experiments, and in idealized 1pctCO 2 and abrupt 4xCO 2 experiments. Several models, however, do predict no change or ENSO weakening, especially in the idealized experiments. Critically, the strongest forcing (abrupt-4xCO 2 ) does not induce the strongest ENSO response, while differences between the models are much greater than those between warming scenarios. For the long-term response (over 1000 years) the models disagree even on the sign of change. Furthermore, changes in ENSO sea surface temperature (SST) variability are only modestly correlated with the tropical Pacific mean state change. The highest correlation for ENSO SST amplitude is found with the mean zonal SST gradient in the SSP5-8.5 experiment (R = –0.58). In contrast, changes in ENSO rainfall variability correlate well with changes in the mean state, as well as with changes in ENSO SST variability. When evaluating the Bjerknes Stability Index for a subset of models, we find that it is not a reliable predictor of ENSO strengthening, as this index tends to predict greater stability with warming. We argue that the enhanced ENSO stability is offset by increases in atmospheric noise or/and potential nonlinear effects. However, a robust inter-model mechanism that can explain a stronger ENSO simulated with global warming is still lacking. Therefore, caution should be exercised when considering ENSO changes based on a single model or warming scenario.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Co-occurrence of native white-tailed deer and invasive wild pigs: Evidence for competition?

Understanding whether invasive and native species compete for shared resources where they co-occur is essential for mitigating the negative impacts of invasive species on native ecosystems. Here, we examined how the presence and density of an invasive species, wild pigs (Sus scrofa), affect native white-tailed deer (Odocoileus virginianus; hereafter, deer) on the Savannah River Site, SC, USA. We examined potential changes in deer areas of use, temporal overlap, and occupancy to evaluate the effects of wild pig occurrence and density on deer space use, diel activity, and co-occurrence with wild pigs across 9 months during 2018 and 2019. Wild pig density had the strongest effect on deer space use in high- and moderate-use areas. Declines in deer space use in response to wild pig density were most pronounced in March and October 2018 and April 2019 for females, while male space use declined in response to wild pig density in October and December 2018. Both species were largely nocturnal with high overlap in diel activity across months. Deer occupancy responses to wild pig density varied across months, with negative responses in May and October 2018 and positive responses in July 2018 and April 2019. Deer and wild pigs co-occurred at 30%–59% of camera stations across months, with broadscale co-occurrence patterns being unaffected by changes in shared cover or wild pig occurrence. Overall, our results suggest that deer make fine-scale behavioral adjustments to avoid wild pigs, providing evidence that competition is likely occurring even where wild pig density is relatively low. Such fine-scale behavioral plasticity in deer appears to mitigate the costs of competition with wild pigs and may be a mechanism enabling long-term co-existence of deer and wild pigs. Our study provides novel insight on the complexities of spatiotemporal relationships between invasive wild pigs and native deer and suggests that the negative effects of interactions between deer and wild pigs may be more pronounced when deer life history needs are particularly demanding. In areas where eradication of invasive wild pigs may be impossible, maintaining low wild pig densities may help mitigate, but may not eliminate, the negative effects of wild pigs on deer.

resource partitioning↗

NASA NTRSDate not supplied

Open Science for Plants in Space: Data Sharing, Standards, and Informatics for Reuse and Knowledge Discovery

Upcoming deep space missions rely on plants and crops for crew and ecosystem health. Access to space plant data enables scientists to gain a deeper understanding of biological responses to ionizing radiation, altered gravity, low atmospheric pressure, elevated CO2, and altered photoperiods. Open Science is the practice of making research available to all, while respecting diverse cultures, fostering collaborations with equity. 2023 is the ‘Year of Open Science’, and NASA has a 5-year Transform to Open Science (TOPS) mission designed to rapidly transform the agency toward an inclusive culture of open science. NASA’s Open Science Data Repository (OSDR) developed by NASA’s Biological and Physical Sciences Division provides access to data from space-relevant biological experiments. OSDR combines two databases, GeneLab and Ames Life Sciences Data Archive (ALSDA) to maximize access to standardized ‘omics (e.g., transcriptomics, proteomics) and phenotypic data (e.g., microscopy, biomass), respectively. OSDR started in 2014 with the creation of the first space-relevant FAIR (Findable, Accessible, Interoperable, Reusable) biological ‘omics repository (GeneLab), providing detailed metadata on investigation, sample, and assay levels. Today, GeneLab hosts 62 plant datasets which have led to 5 published peer-reviewed meta-analysis publications. Most of these publications were collaboration efforts under the OSDR Analysis Working Groups (AWGs). AWGs provide great opportunities for investigators to collaborate and set new standards for space-relevant data and metadata. The AWGs are welcoming any ASPB members interested in providing plant expertise for space biology. The addition of ALSDA to OSDR is also expanding analysis capability beyond ‘omics. Now is the time to get involved as a Subject Matter Expert as we establish the framework for modern plant data archiving through the AWGs. Investigators are invited to submit their space-relevant plant datasets to OSDR and visit the site to learn about the tools OSDR has to offer (osdr.nasa.gov/bio).

FAIR↗

DOE OSTI2024

Epitopes recognition of SARS-CoV-2 nucleocapsid RNA binding domain by human monoclonal antibodies

Coronavirus nucleocapsid protein (NP) of SARS-CoV-2 plays a central role in many functions important for virus proliferation including packaging and protecting genomic RNA. The protein shares sequence, structure, and architecture with nucleocapsid proteins from betacoronaviruses. The N-terminal domain (NP RBD ) binds RNA and the C-terminal domain is responsible for dimerization. After infection, NP is highly expressed and triggers robust host immune response. The anti-NP antibodies are not protective and not neutralizing but can effectively detect viral proliferation soon after infection. Two structures of SARS-CoV-2 NP RBD were determined providing a continuous model from residue 48 to 173, including RNA binding region and key epitopes. Five structures of NP RBD complexes with human mAbs were isolated using an antigen-bait sorting. Complexes revealed a distinct complement-determining regions and unique sets of epitope recognition. This may assist in the early detection of pathogens and designing peptide-based vaccines. Mutations that significantly increase viral load were mapped on developed, full length NP model, likely impacting interactions with host proteins and viral RNA.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Parallel Runtime Interface for Fortran (PRIF) Specification (Rev. 0.3)

This document specifies an interface to support the parallel features of Fortran, named the Parallel Runtime Interface for Fortran (PRIF). PRIF is a proposed solution in which the runtime library is responsible for coarray allocation, deallocation and accesses, image synchronization, atomic operations, events, and teams. In this interface, the compiler is responsible for transforming the invocation of Fortran-level parallel features into procedure calls to the necessary PRIF procedures. The interface is designed for portability across shared- and distributed-memory machines, different operating systems, and multiple architectures. Implementations of this interface are intended as an augmentation for the compiler's own runtime library. With an implementation-agnostic interface, alternative parallel runtime libraries may be developed that support the same interface. One benefit of this approach is the ability to vary the communication substrate. A central aim of this document is to define a parallel runtime interface in standard Fortran syntax, which enables us to leverage Fortran to succinctly express various properties of the procedure interfaces, including argument attributes.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Parallel Runtime Interface for Fortran (PRIF) Specification (Rev. 0.5)

This document specifies an interface to support the parallel features of Fortran, named the Parallel Runtime Interface for Fortran (PRIF). PRIF is a proposed solution in which the runtime library is primarily responsible for implementing coarray allocation, deallocation and accesses, image synchronization, atomic operations, events, teams and collective subroutines. In this interface, the compiler is responsible for transforming the invocation of Fortran-level parallel features into procedure calls to the necessary PRIF subroutines. The interface is designed for portability across shared- and distributed-memory machines, different operating systems, and multiple architectures. Implementations of this interface are intended as an augmentation for the compiler's own runtime library. With an implementation-agnostic interface, alternative parallel runtime libraries may be developed that support the same interface. One benefit of this approach is the ability to vary the communication substrate. A central aim of this document is to define a parallel runtime interface in standard Fortran syntax, which enables us to leverage Fortran to succinctly express various properties of the procedure interfaces, including argument attributes.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

Parallel Runtime Interface for Fortran (PRIF) Design Document (Rev. 0.2)

This design document proposes an interface to support the parallel features of Fortran, named the Parallel Runtime Interface for Fortran (PRIF). PRIF is a proposed solution in which the runtime library is responsible for coarray allocation, deallocation and accesses, image synchronization, atomic operations, events, and teams. In this interface, the compiler is responsible for transforming the invocation of Fortran-level parallel features into procedure calls to the necessary PRIF procedures. The interface is designed for portability across shared- and distributed-memory machines, different operating systems, and multiple architectures. Implementations of this interface are intended as an augmentation for the compiler's own runtime library. With an implementation-agnostic interface, alternative parallel runtime libraries may be developed that support the same interface. One benefit of this approach is the ability to vary the communication substrate. A central aim of this document is to define a parallel runtime interface in standard Fortran syntax, which enables us to leverage Fortran to succinctly express various properties of the procedure interfaces, including argument attributes.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Parallel Runtime Interface for Fortran (PRIF) Specification (Rev. 0.4)

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1987

Understanding natural language for spacecraft sequencing

The paper describes a natural language understanding system, START, that translates English text into a knowledge base. The understanding and the generating modules of START share a Grammar which is built upon reversible transformations. Users can retrieve information by querying the knowledge base in English; the system then produces an English response. START can be easily adapted to many different domains. One such domain is spacecraft sequencing. A high-level overview of sequencing as it is practiced at JPL is presented in the paper, and three areas within this activity are identified for potential application of the START system. Examples are given of an actual dialog with START based on simulated data for the Mars Observer mission.

Katz, Boris↗

NASA NTRS1989

New computing systems and their impact on structural analysis and design

A review is given of the recent advances in computer technology that are likely to impact structural analysis and design. The computational needs for future structures technology are described. The characteristics of new and projected computing systems are summarized. Advances in programming environments, numerical algorithms, and computational strategies for new computing systems are reviewed, and a novel partitioning strategy is outlined for maximizing the degree of parallelism. The strategy is designed for computers with a shared memory and a small number of powerful processors (or a small number of clusters of medium-range processors). It is based on approximating the response of the structure by a combination of symmetric and antisymmetric response vectors, each obtained using a fraction of the degrees of freedom of the original finite element model. The strategy was implemented on the CRAY X-MP/4 and the Alliant FX/8 computers. For nonlinear dynamic problems on the CRAY X-MP with four CPUs, it resulted in an order of magnitude reduction in total analysis time, compared with the direct analysis on a single-CPU CRAY X-MP machine.

Noor, Ahmed K.↗

NASA NTRS1994

Scientific and technical photography at NASA Langley Research Center

As part of my assignment connected with the Scientific and Technical Photography & Lab (STPL) at the NASA Langley Research Center I conducted a series of interviews and observed the day to day operations of the STPL with the ultimate objective of becoming exposed first hand to a scientific and technical photo/imaging department for which my school prepares its graduates. I was also asked to share my observations with the staff in order that these comments and observations might assist the STPL to better serve its customers. Meetings with several individuals responsible for various wind tunnels and with a group that provides photo-optical instrumentation services at the Center gave me an overview of the services provided by the Lab and possible areas for development. In summary form these are some of the observations that resulted from the interviews and daily contact with the STPL facility. (1) The STPL is perceived as a valuable and almost indispensable service group within the organization. This comment was invariably made by everyone. Everyone also seemed to support the idea that the STPL continue to provide its current level of service and quality. (2) The STPL generally is not perceived to be a highly technically oriented group but rather as a provider of high quality photographic illustration and documentation services. In spite of the importance and high marks assigned to the STPL there are several observations that merit consideration and evaluation for possible inclusion into the STPL's scope of expertise and future operating practices. (1) While the care and concern for artistic rendition of subjects is seen as laudable and sometimes valuable, the time that this often requires is seen as interfering with keeping the tunnels operating at maximum productivity. Tunnel managers would like to shorten down-time due to photography, have services available during evening hours and on short notice. It may be of interest to the STPL that tunnel managers are incorporating ever greater imaging capabilities in their facilities. To some extent this could mean a reduced demand for traditional photographic services. (2) The photographic archive is seen as a Center resource. Archiving of images, as well as data, is a matter of concern to the investigators. The early holdings of the Photographic Archives are quickly deteriorating. The relative inaccessibility of the material held in the archives is problematic. (3) In certain cases delivery or preparation of digital image files instead of, or along with, hardcopy is already being perceived by the STPL's customers as desirable. The STPL should make this option available, and the fact that it has, or will have this capability widely known. (4) The STPL needs to continue to provide expert advice and technical imaging support in terms of application information to users of traditional photographic and new electronic imaging systems. Cooperative demo projects might be undertaken to maintain or improve the capabilities of the Lab. (5) STPL personnel do not yet have significant electronic imaging or electronic communication skills and improvements in this is an area could potentially have a positive impact on the Center. (6) High speed photographic or imaging services are often mentioned by the STPL as being of primary importance to their mission but the lab supports very few projects calling for high speed imaging services. Much high speed equipment is in poor state of repair. It is interesting to note that when the operation of lasers, digital imaging or quantitative techniques are requested these are directed to another NASA department. Could joint activities be initiated to solve problems? (7). The STPL could acquire more technical assignments if examples of the areas where they posses expertise would be circulated around the center. The fact that the STPL owns high speed video capability could be 'advertised' among its customer base if there truly was an interest in building up a customer base in this area. The STPL could participate in events like TOPS as an exhibitor, as well as a documenter, of the event.

Davidhazy, Andrew↗

NASA NTRS2003

Satellites as Sentinels for Climate and Health

Remotely-sensed data and observations are providing powerful new tools for addressing climate and environment-related human health problems through increased capabilities for monitoring, risk mapping, and surveillance of parameters useful to such problems as vector- borne and infectious diseases, air and water quality,. harmful algal blooms, W radiation, contaminant and pathogen transport in air and water, and thermal stress. Remote sensing, geographic information systems (GIs), global positioning systems (GPS), improved computation capabilities, and interdisciplinary research between the Earth and health science communities, together with local knowledge, are being combined in rich collaborative efforts resulting in more rapid problem-solving, early warning, and prevention in global climate and health issues. These collaborative efforts are enabling increased understanding of the relationships among changes in temperature, rainfall, wind, soil moisture, solar radiation, vegetation, and the patterns of extreme weather events and health issues. This increased understanding and improved information and data sharing, in turn, empowers local health and environmental decision-makers to better predict climate-related health problems, decrease vulnerability, take preventive measures, and improve response actions. This paper provides a number of recent examples of how satellites - from their unique vantage point in space - can serve as sentinels for climate and health.

Maynard, Nancy G.↗

DOE OSTI2024

Impacts of Forest Management-Induced Productivity Changes on Future Land Use and Land Cover Change

Anthropogenic land use and land cover change (LULCC) is projected to continue in the future. However, the influence of forest management on forest productivity change and subsequent LULCC projections remains under-investigated. This study explored the impacts of forest management-induced change in forest productivity on LULCC throughout the 21st century. Specifically, we developed a framework to softly couple the Global Change Analysis Model and Global Timber Model to consider forest management-induced forest productivity change and projected future LULCC across the five Shared Socioeconomic Pathways (SSPs). We found future increases in forest management intensity overall drive the increase of forest productivity. The forest management-induced forest productivity change shows diverse responses across all SSPs, with a global increase from 2015 to 2100 ranging from 3.9% (SSP3) to 8.8% (SSP1). This further leads to an overall decrease in the total area with a change of land use types, with the largest decrease under SSP1 (-7.5%) and the smallest decrease under SSP3 (-0.7%) in 2100. Among land use types, considering forest management-induced change significantly reduces the expansion of managed forest and also reduces the loss of natural land in 2100 across SSPs. This suggests that ignoring forest management-induced forest productivity change underestimates the efficiency of wood production, overestimates the managed forest expansion required to meet the future demand, and consequently, potentially introduces uncertainties into relevant analyses, for example, carbon cycle and biodiversity. Thus, we advocate to better account for the impacts of forest management in future LULCC projections.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Gene-by-environment interactions influence the fitness cost of gene copy-number variation in yeast

Abstract Variation in gene copy number can alter gene expression and influence downstream phenotypes; thus copy-number variation provides a route for rapid evolution if the benefits outweigh the cost. We recently showed that genetic background significantly influences how yeast cells respond to gene overexpression, revealing that the fitness costs of copy-number variation can vary substantially with genetic background in a common-garden environment. But the interplay between copy-number variation tolerance and environment remains unexplored on a genomic scale. Here, we measured the tolerance to gene overexpression in four genetically distinct Saccharomyces cerevisiae strains grown under sodium chloride stress. Overexpressed genes that are commonly deleterious during sodium chloride stress recapitulated those commonly deleterious under standard conditions. However, sodium chloride stress uncovered novel differences in strain responses to gene overexpression. West African strain NCYC3290 and North American oak isolate YPS128 are more sensitive to sodium chloride stress than vineyard BC187 and laboratory strain BY4743. Consistently, NCYC3290 and YPS128 showed the greatest sensitivities to overexpression of specific genes. Although most genes were deleterious, hundreds were beneficial when overexpressed—remarkably, most of these effects were strain specific. Few beneficial genes were shared between the sodium chloride-sensitive isolates, implicating mechanistic differences behind their sodium chloride sensitivity. Transcriptomic analysis suggested underlying vulnerabilities and tolerances across strains, and pointed to natural copy-number variation of a sodium export pump that likely contributes to strain-specific responses to overexpression of other genes. Our results reveal extensive strain-by-environment interactions in the response to gene copy-number variation, raising important implications for the accessibility of copy-number variation-dependent evolutionary routes under times of stress.

60 APPLIED LIFE SCIENCES↗