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At least 397 records · Page 22

Multi‐model analysis of climate impacts on plant photosynthesis in China during 2000–2015

Abstract Differences, arising from differences in gross primary production (GPP) model structures and driving forces, have fuelled arguments concerning interannual changes of GPP in China since 2000. To better investigate the interannual variability of GPP and its covariance with climate factors in China, this study adopted a multi‐model analysis based on three GPP models (i.e., Terrestrial Ecosystem Carbon flux model [TEC], Breathing Earth System Simulator model [BESS], and MOD17 GPP model). The results show that annual GPP in China increased by 0.021–0.057 Pg C year −1 from 2000 to 2015 attributable to atmospheric‐CO 2 fertilization effects and favourable climate change, that is, increasing precipitation ( P r ) and temperature ( T a ). However, northern China and southern China had a large difference in the amplitude of these GPP changes; annual GPP increased by 0.017–0.039 Pg C year −1 in northern China but only 0.001–0.018 Pg C year −1 in southern China. Northern China and southern China occupy contrasting climate zones and this contrast produced different interannual variability of GPP through different mechanisms. Northern China has a dry climate with GPP changes sensitive to P r . As a result, more P r along with higher T a in northern China produced the strong uptrend of GPP from 2000 to 2015. In contrast, southern China has a wet climate with its GPP sensitive to solar radiation and T a . For the interval of 2000–2015, decreasing radiation plus drought exerted a negative influence on GPP in southern China. This study highlights the diverse mechanisms in which climate change affects GPP in dry and wet climate zones. A robust multi‐model analysis is preferred to reduce uncertainties arising from a single GPP model and its driving data.

Yan, Hao↗

Spatial Mapping of Pyocyanin in Pseudomonas Aeruginosa Bacterial Communities Using Surface Enhanced Raman Scattering

Surface enhanced Raman spectroscopy (SERS) imaging was used in conjunction with principal component analysis (PCA) for the in situ spatiotemporal mapping of the virulence factor pyocyanin in communities of the pathogenic bacterium Pseudomonas aeruginosa. The combination of SERS imaging and PCA analysis provides a robust method for the characterization of heterogeneous biological systems while circumventing issues associated with interference from sample autofluorescence and low reproducibility of SERS signals. The production of pyocyanin is found to depend both on the growth carbon source and on the specific strain of P. aeruginosa studied. A cystic fibrosis lung isolate strain of P. aeruginosa synthesizes and secretes pyocyanin when grown with glucose and glutamate, while the laboratory strain exhibits detectable production of pyocyanin only when grown with glutamate as the source of carbon. Pyocyanin production in the laboratory strain grown with glucose was below the limit of detection of SERS. In addition, the combination of SERS imaging and PCA can elucidate subtle differences in the molecular composition of biofilms. As a result, PCA loading plots from the clinical isolate exhibit features corresponding to vibrational bands of carbohydrates, which represent the mucoid biofilm matrix specific to that isolate, features that are not seen in the PCA loading plots of the laboratory strain.

59 BASIC BIOLOGICAL SCIENCES↗

Analysis of the ratio of ℓ 1 and ℓ 2 norms in compressed sensing

We study the ratio of ℓ 1 and ℓ 2 norms ( ℓ 1 / ℓ 2 ) as a sparsity-promoting objective in compressed sensing. We first propose a novel criterion that guarantees that an s-sparse signal is the local minimizer of the ℓ 1 / ℓ 2 objective; our criterion is interpretable and useful in practice. We also give the first uniform recovery condition using a geometric characterization of the null space of the measurement matrix, and show that this condition is satisfied for a class of random matrices. We also present analysis on the robustness of the procedure when noise pollutes data. Numerical experiments are provided that compare ℓ 1 / ℓ 2 with some other popular non-convex methods in compressed sensing. Finally, we propose a novel initialization approach to accelerate the numerical optimization procedure. We call this initialization approach support selection, and we demonstrate that it empirically improves the performance of existing ℓ 1 / ℓ 2 algorithms.

97 MATHEMATICS AND COMPUTING↗

Determining significance in social impact assessments (SIA) by applying both technical and participatory approaches: Methodology development and application in a case study of the concentrated solar power plant NOOR{sub O} I in Morocco

One of the main objectives of impact assessments is to identify potentially significant impacts. However, determining this significance has received very limited attention as a procedural step in social impact assessments. Consequently, only limited research and documentation exists on approaches, survey tools and evaluation methods, especially with regard to participatory approaches and combined participatory-technical approaches. This study aims to address this research gap by developing and applying a joined participatory and technical impact significance evaluation. The approach is applied in a case study which analysed the livelihood impacts of the large-scale concentrated solar power plant NOOR{sub O} I in Ouarzazate, Morocco. The analysis shows that although different approaches and significance criteria must be applied when involving both local stakeholders and experts, the linked analysis offers more robust results and an improved basis for decision-making. Furthermore, it was observed in the case study that impacts affecting the social, cultural and political spheres were more often considered significant than impacts affecting the physical and material livelihood dimensions. Regarding sustainability assessments of large-scale renewable energy plants, these findings underline the importance (as for other large-scale infrastructure developments) of placing greater emphasis on the inclusion of social aspects in impact assessments. - Highlights: •Significance evaluation in social impact assessments lacks participatory aspects. •Combined participatory and technical impact significance evaluation developed •Application in a case study to analyse the livelihood impacts of a CSP plant •Involvement of local stakeholders and technical experts results in robust findings. •Social, cultural and political issues are often more relevant than material aspects.

54 ENVIRONMENTAL SCIENCES↗

Equibiaxial flexural strength determination of UO 2 using a ball-on-ring test

To increase nuclear fuel performance and reliability, their mechanical properties require an accurate and statistically relevant assessment. Biaxial flexural strength tests provide an alternative to bend bar techniques for assessing mechanical behavior; namely, the transverse rupture strength (TRS) of ceramic samples. Biaxial test samples require simple geometries and minimal surface preparation, reducing fabrication costs and handling hazards. This study investigated the TRS of polycrystalline UO 2 fuel forms at room temperature using a ball-on-ring test fixture. Here, pellets were fabricated from UO 2 powder using conventional powder processing and sintering techniques. The TRS and Weibull parameters were obtained through Weibull statistics on over 60 UO 2 samples tested under equibiaxial flexure. The larger sample size in this study enabled a more robust Weibull statistical analysis than alternative test methods, which may not capture the stochastic failure of typical ceramics. Furthermore, two different loading ball diameters were employed to assess the impact of contact damage on fracture strength. While Hertzian contact damage was observed with the smaller loading ball, the fracture strength remained unaffected. A fracture analysis of the tested UO 2 samples indicated a mixture of intergranular and transgranular fracture that transitions to transgranular fracture with increasing distance from the fracture origin. The characteristic strength of the combined data sets was determined to be 148 MPa, and the Weibull modulus was determined to be 9.1. The TRS values and Weibull parameters were close to values found in the literature for alternative testing techniques using samples with similar microstructure and density. The findings in this study validate the ball-on-ring method used to obtain the TRS of UO 2 with a sample geometry more representative of nuclear fuels. Additionally, experimental TRS results from this study can be implemented in modeling codes to predict fuel performance, which is critical to fuel burnup extension and advanced nuclear fuel technologies.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Facile One-Pot Nanoproteomics for Label-Free Proteome Profiling of 50–1000 Mammalian Cells

Recent advances in sample preparation enable label-free MS-based proteome profiling of small numbers of mammalian cells. However, specific devices are often required to downscale sample processing volume from the standard 50-200 µL to sub-µL for effective nanoproteomics, which greatly impedes the implementation of current nanoproteomics methods by broad proteomics research community. Here we report a facile one-pot nanoproteomics method termed SOPs-MS (Surfactant-assisted One-Pot sample processing at the standard volume coupled with MS) for convenient proteome profiling of 50-1000 mammalian cells. Building upon our recent development of SOP-MS for label-free single-cell proteomics at low µL volume (Commun Bio 2021, 4, 265), we have systematically evaluated its processing volume at 10-200 µL using 100 human cells for robust reproducible nanoproteomic analysis. The processing volume of 50 µL which is in the range of volume for standard proteomics sample preparation, has been selected for easy sample handling with benchtop micropipette. Using the commonly accessible LC-MS platform, SOPs-MS allows for reliable label-free quantification of ~1200-2700 protein groups from 50-1000 MCF10A cells. When applied to small subpopulations of mouse colon crypt cells, SOPs-MS can reveal distinct protein signatures between any two subpopulation cells with identification of ~1500-2500 protein groups for each subpopulation. SOPs-MS may pave the way for routine deep proteome profiling of small numbers of cells as well as low-input samples.

59 BASIC BIOLOGICAL SCIENCES↗

A database of global storm surge reconstructions

Storm surges are among the deadliest coastal hazards and understanding how they have been affected by climate change and variability in the past is crucial to prepare for the future. However, tide gauge records are often too short to assess trends and perform robust statistical analyses. Here we use a data-driven modeling framework to simulate daily maximum surge values at 882 tide gauge locations across the globe. We use five different atmospheric reanalysis products for the storm surge reconstruction, the longest one going as far back as 1836. The data that we generate can be used, for example, for long-term trend analyses of the storm surge climate and identification of regions where changes in the intensity and/or frequency of storms surges have occurred in the past. It also provides a better basis for robust extreme value analysis, especially for tide gauges where observational records are short. The data are made available for public use through an interactive web-map as well as a public data repository.

54 ENVIRONMENTAL SCIENCES↗

Understanding the links between composition, polyhedral distortion, and luminescence properties in green-emitting β-Si 6–z Al z O z N 8–z :Eu 2+ phosphors

Inorganic phosphor materials play a crucial role in the creation of white light from blue and near-UV solid-state light-emitting diodes. Understanding the intricacies of the phosphor structure is key for setting the stage for improved, more efficient functionality. Average structure and coordination environment analysis of the robust and efficient green-emitting phosphor, β-SiAlON:Eu 2+ (β-Si 6–z Al z O z N 8–z Eu 0.009 ), is combined here with a range of property measurements to elucidate the role of Al content ( z ) in luminescence properties, including the red shift of emission and the thermal quenching of luminescence as a function of increasing Al content z . Average structure techniques reveal changes in polyhedral distortion with increasing z for the 9-coordinate Eu site in β-SiAlON:Eu 2+ . X-ray absorption near edge structure (XANES) is used to confirm that the majority of the activator Eu is in the Eu 2+ state, exhibiting the symmetry-allowed and efficient 4f 7 5d 0 → 4f 6 5d 1 transitions. As a result, room temperature and temperature-dependent luminescence indicate a curious increase in thermal stability with increasing z over a small range due to an increasing barrier for thermal ionization, which is correlated to an increase in the quantum yield of the phosphor.

36 MATERIALS SCIENCE↗

Fundamental limitations of high contrast imaging set by small sample statistics

In this paper, we review the impact of small sample statistics on detection thresholds and corresponding confidence levels (CLs) in high-contrast imaging at small angles. When looking close to the star, the number of resolution elements decreases rapidly toward small angles. This reduction of the number of degrees of freedom dramatically affects CLs and false alarm probabilities. Naively using the same ideal hypothesis and methods as for larger separations, which are well understood and commonly assume Gaussian noise, can yield up to one order of magnitude error in contrast estimations at fixed CL. The statistical penalty exponentially increases toward very small inner working angles. Even at 5-10 resolution elements from the star, false alarm probabilities can be significantly higher than expected. Here we present a rigorous statistical analysis that ensures robustness of the CL, but also imposes a substantial limitation on corresponding achievable detection limits (thus contrast) at small angles. This unavoidable fundamental statistical effect has a significant impact on current coronagraphic and future high-contrast imagers. Finally, the paper concludes with practical recommendations to account for small number statistics when computing the sensitivity to companions at small angles and when exploiting the results of direct imaging planet surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

SHELS: A complete galaxy redshift survey with R ≤ 20.6

The SHELS (Smithsonian Hectospec Lensing Survey) is a complete redshift survey covering two well-separated fields (F1 and F2) of the Deep Lens Survey to a limiting R = 20.6. Here we describe the redshift survey of the F2 field (R.A.{sub 2000} = 09{sup h}19{sup m}32.4 and decl.{sub 2000} = +30°00'00''). The survey includes 16,294 new redshifts measured with the Hectospec on the MMT. The resulting survey of the 4 deg{sup 2} F2 field is 95% complete to R = 20.6, currently the densest survey to this magnitude limit. The median survey redshift is z = 0.3; the survey provides a view of structure in the range 0.1 ≲ z ≲ 0.6. An animation displays the large-scale structure in the survey region. We provide a redshift, spectral index D {sub n}4000, and stellar mass for each galaxy in the survey. We also provide a metallicity for each galaxy in the range 0.2 <z < 0.38. To demonstrate potential applications of the survey, we examine the behavior of the index D {sub n}4000 as a function of galaxy luminosity, stellar mass, and redshift. The known evolutionary and stellar mass dependent properties of the galaxy population are cleanly evident in the data. We also show that the mass-metallicity relation previously determined from these data is robust to the analysis approach.

79 ASTRONOMY AND ASTROPHYSICS↗

Machine learning aided line intensity ratio method for helium–hydrogen mixed recombining plasmas

The helium line intensity ratio (LIR) with the help of a collisional radiative (CR) model has long been used to measure the electron density, n e , and temperature, T e , and its potential and limitations for fusion applications have been discussed. However, it has been reported that the CR model approach leads to deviations in helium–hydrogen mixed plasmas and/or recombining plasmas. In this study, a machine learning (ML) aided LIR method is used to measure n e and T e from spectroscopic data of helium–hydrogen mixed recombining plasmas in the divertor simulator Magnum-PSI. To analyze mixed plasmas, which have more complex spectral shapes, the spectroscopy data were used directly for training instead of separating the intensities of each line. Finally, it is shown that the ML approach can provide a robust and simpler analysis method to deduce n e and T e from the visible emissions in helium–hydrogen mixed plasmas.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Bias of damped Lyman-α systems from their cross-correlation with CMB lensing

We cross-correlate the positions of damped Lyman-α systems (DLAs) and their parent quasar catalog with a convergence map derived from the Planck cosmic microwave background (CMB) temperature data. We then make consistent measurements of the lensing signal of both samples in both Fourier and configuration space. By interpreting the excess signal present in the DLA catalog with respect to the parent quasar catalog as caused by the large scale structure traced by DLAs, we are able to infer the bias of these objects: b DLA =2.6±0.9. These results are consistent with previous measurements made in cross-correlation with the Lyman-α forest, although the current noise in the lensing data and the low number density of DLAs limits the constraining power of this measurement. We discuss the robustness of the analysis with respect to a number different systematic effects and forecast prospects of carrying out this measurement with data from future experiments.

79 ASTRONOMY AND ASTROPHYSICS↗

In-flight polarization angle calibration for LiteBIRD: blind challenge and cosmological implications

We present a demonstration of the in-flight polarization angle calibration for the JAXA/ISAS second strategic large class mission, LiteBIRD, and estimate its impact on the measurement of the tensor-to-scalar ratio parameter, r, using simulated data. We generate a set of simulated sky maps with CMB and polarized foreground emission, and inject instrumental noise and polarization angle offsets to the 22 (partially overlapping) LiteBIRD frequency channels. Our in-flight angle calibration relies on nulling the EB cross correlation of the polarized signal in each channel. This calibration step has been carried out by two independent groups with a blind analysis, allowing an accuracy of the order of a few arc-minutes to be reached on the estimate of the angle offsets. Both the corrected and uncorrected multi-frequency maps are propagated through the foreground cleaning step, with the goal of computing clean CMB maps. We employ two component separation algorithms, the Bayesian-Separation of Components and Residuals Estimate Tool (B-SeCRET), and the Needlet Internal Linear Combination (NILC). We find that the recovered CMB maps obtained with algorithms that do not make any assumptions about the foreground properties, such as NILC, are only mildly affected by the angle miscalibration. However, polarization angle offsets strongly bias results obtained with the parametric fitting method. Once the miscalibration angles are corrected by EB nulling prior to the component separation, both component separation algorithms result in an unbiased estimation of the r parameter. While this work is motivated by the conceptual design study for LiteBIRD, its framework can be broadly applied to any CMB polarization experiment. In particular, the combination of simulation plus blind analysis provides a robust forecast by taking into account not only detector sensitivity but also systematic effects.

79 ASTRONOMY AND ASTROPHYSICS↗

Full-Shape analysis of the power spectrum and bispectrum of DESI DR1 LRG and QSO samples

We present the first joint analysis of the power spectrum and bispectrum using the Data Release 1 (DR1) of the Dark Energy Spectroscopic Instrument (DESI), focusing on Luminous Red Galaxies (LRGs) and quasars (QSOs) across a redshift range of 0.4 ≤ z ≤ 2.1. By combining the two- and three-point statistics, we are able to partially break the degeneracy between the logarithmic growth rate, f(z), and the amplitude of dark matter fluctuations, σ s8 (z), which cannot be measured separately in analyses that only involve the power spectrum. In comparison with the (fiducial) Planck ΛCDM cosmology we obtain f/f fid = {0.888 -0.089 +0.186 ,0.977 -0.220 +0.182 ,1.030 -0.085 +0.368 }, σ s8 /σ fid s8 = {1.224 -0.133 +0.091 ,1.071 -0.163 +0.278 ,1.00 0 -0.223 +0.088 } respectively for the three LRG redshift bins, corresponding to a cumulative 10.1% constraint on f, and of 8.4% on σ s8 , including the systematic error budget. Additionally, we obtain constraints for the ShapeFit compressed parameters describing the isotropic scaling parameter, α iso (z), the Alcock-Paczyński parameter, α AP (z), the combined growth of structure parameter fσ s8 (z), and the combined shape parameter m(z)+n(z). Their cumulative constraints from our joint power spectrum-bispectrum analysis are respectively σ αiso = 0.9% (9% improvement with respect to our power spectrum-only analysis); σ α AP = 2.3% (no improvement with respect to power spectrum-only analysis, which is expected given that the bispectrum monopole has no significant anisotropic signal); σ fσs8 = 5.1% (9% improvement); σ m+n = 2.3% (11% improvement). These results are fully consistent with the main DESI power spectrum analysis, demonstrating the robustness of the DESI cosmological constraints, and compatible with Planck ΛCDM cosmology.

79 ASTRONOMY AND ASTROPHYSICS↗

Metabolic Response in Patients With Post-treatment Lyme Disease Symptoms/Syndrome

Abstract Background Post-treatment Lyme disease symptoms/syndrome (PTLDS) occurs in approximately 10% of patients with Lyme disease following antibiotic treatment. Biomarkers or specific clinical symptoms to identify patients with PTLDS do not currently exist and the PTLDS classification is based on the report of persistent, subjective symptoms for ≥6 months following antibiotic treatment for Lyme disease. Methods Untargeted liquid chromatography–mass spectrometry metabolomics was used to determine longitudinal metabolic responses and biosignatures in PTLDS and clinically cured non-PTLDS Lyme patients. Evaluation of biosignatures included (1) defining altered classes of metabolites, (2) elastic net regularization to define metabolites that most strongly defined PTLDS and non-PTLDS patients at different time points, (3) changes in the longitudinal abundance of metabolites, and (4) linear discriminant analysis to evaluate robustness in a second patient cohort. Results This study determined that observable metabolic differences exist between PTLDS and non-PTLDS patients at multiple time points. The metabolites with differential abundance included those from glycerophospholipid, bile acid, and acylcarnitine metabolism. Distinct longitudinal patterns of metabolite abundance indicated a greater metabolic variability in PTLDS versus non-PTLDS patients. Small numbers of metabolites (6 to 40) could be used to define PTLDS versus non-PTLDS patients at defined time points, and the findings were validated in a second cohort of PTLDS and non-PTLDS patients. Conclusions These data provide evidence that an objective metabolite-based measurement can distinguish patients with PTLDS and help understand the underlying biochemistry of PTLDS.

Immunology↗

Mitigating contamination in LSS surveys: a comparison of methods

ABSTRACT Future large-scale structure surveys will measure the locations and shapes of billions of galaxies. The precision of such catalogues will require meticulous treatment of systematic contamination of the observed fields. We compare several existing methods for removing such systematics from galaxy clustering measurements. We show how all the methods, including the popular pseudo-Cℓ Mode Projection and Template Subtraction methods, can be interpreted under a common regression framework and use this to suggest improved estimators. We show how methods designed to mitigate systematics in the power spectrum can be used to produce clean maps, which are necessary for cosmological analyses beyond the power spectrum, and we extend current methods to treat the next-order multiplicative contamination in observed maps and power spectra, which reduced power spectrum errors from $\Delta \chi ^2_{\rm C_\ell }\simeq 10$ to ≃ 1 in simulated analyses. Two new mitigation methods are proposed, which incorporate desirable features of current state-of-the-art methods while being simpler to implement. Investigating the performance of all the methods on a common set of simulated measurements from Year 5 of the Dark Energy Survey, we test their robustness to various analysis cases. Our proposed methods produce improved maps and power spectra when compared to current methods, while requiring almost no user tuning. We end with recommendations for systematics mitigation in future surveys, and note that the methods presented are generally applicable beyond the galaxy distribution to any field with spatial systematics.

79 ASTRONOMY AND ASTROPHYSICS↗

Transitioning from Stage-III to Stage-IV: cosmology from galaxy×CMB lensing and shear×CMB lensing

ABSTRACT We examine the cosmological constraining power from two cross-correlation probes between galaxy and cosmic microwave background (CMB) surveys: the cross-correlation of lens galaxy density with CMB lensing convergence 〈δgκCMB〉, and source galaxy weak lensing shear with CMB lensing convergence 〈γκCMB〉. These two cross-correlation probes provide an independent cross-check of other large-scale structure constraints and are insensitive to galaxy-only or CMB-only systematic effects. In addition, when combined with other large-scale structure probes, the cross-correlations can break degeneracies in cosmological and nuisance parameters, improving both the precision and robustness of the analysis. In this work, we study how the constraining power of 〈δgκCMB〉 + 〈γκCMB〉 changes from Stage-III (ongoing) to Stage-IV (future) surveys. Given the flexibility in selecting the lens galaxy sample, we also explore systematically the impact on cosmological constraints when we vary the redshift range and magnitude limit of the lens galaxies using mock galaxy catalogs. We find that in our setup, the contribution to cosmological constraints from 〈δgκCMB〉 and 〈γκCMB〉 are comparable in the Stage-III data sets; but in Stage-IV surveys, the noise in 〈δgκCMB〉 becomes subdominant to cosmic variance, preventing 〈δgκCMB〉 to further improve the constraints. This implies that to maximize the cosmological constraints from future 〈δgκCMB〉 + 〈γκCMB〉 analyses, we should focus more on the requirements on 〈γκCMB〉 instead of 〈δgκCMB〉. Furthermore, the selection of the lens sample should be optimized in terms of our ability to characterize its redshift or galaxy bias instead of its number density.

79 ASTRONOMY AND ASTROPHYSICS↗

Magnetoresistance effects in a spin-fermion model for multilayers

Here, we consider a spin-fermion model consisting of free electrons coupled to classical spins where the latter are embedded in a quasi-one-dimensional superlattice structure consisting of spin blocks separated by spinless buffers. Using a spiral ansatz for the spins, we study the effect of the electron mediated Ruderman-Kittel-Kasuya-Yosida (RKKY) interaction on the $\textit{T}$ = 0 ground state of the system. We find that the RKKY interaction can lead to ferromagnetic, antiferromagnetic, or intermediate spiral phases for different system parameters. When the width is much larger than the length of the individual blocks, the spiral phases are suppressed, and the ground state oscillates between ferromagnetic and antiferromagnetic orders as the size of the buffer regions is varied. This is accompanied by a corresponding oscillation in the Drude weight reflecting an increased conductivity in the ferromagnetic state compared to the antiferromagnetic one. These results are reminiscent of classic giant magnetoresistance phenomena observed in a similar geometry of thin sandwiched magnetic and nonmagnetic layers. Our analysis provides a robust framework for understanding the role of the RKKY interaction on the ground-state order and corresponding transport properties of such systems, extending beyond the conventional perturbative regime.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗