Optical resolution of D, L amino acids by gas chromatography and mass spectrometry.
Optical scanning and resolution of D, L amino acids by gas-liquid chromatography and mass spectrometry
OPTICAL MEASUREMENT↗
SEARCH · Engineering Papers
Results for “MASS RESOLUTION”
Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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TBS FROST Data from 2023 at SGP C1
The FROST provides chemical analysis of four time-resolved sorbent samples on a LECO GCxGC Bench Time of Flight Mass Spectrometer, using a Gerstel MPS Thermal Desorption System. Samples collected via FROST can be analyzed on one of two Sandia National Laboratories' instruments. One instrument will provide ultra-high mass spectrometer resolution (up to four decimal points or m/z data) and can be used for identification of true unknowns. Data can include suspected formulas of species not included in any current mass spectra database. This instrument also has a low limit of detection of known species (tens of femtogram range). The second instrument can provide an order of magnitude lower limits of detection (into the single-digit femtogram range) for known species currently in mass spectra databases. This system is also more resilient to environmental samples that contain higher levels of moisture.
54 ENVIRONMENTAL SCIENCES↗
Thermal detectors for high resolution spectroscopy
Cryogenic microcalorimeters can be made sensitive enough to measure the energy deposited by a single particle or X-ray photon with an accuracy of about one electron volt. It may also be possible to construct detectors of several-kilograms mass whose resolution is only a few times worse than this. Data from relatively crude test devices are in good agreement with thermal performance calculations, and a total system noise of 11 eV FWHM has been obtained for a silicon detector operating at 98 mK. Observations of 35 eV FWHM for 6-keV X-rays with a different device have been made.
Mccammon, D.↗
High-resolution stellar vidicon spectrophotometry. I - Variable mass loss from Arcturus and the hypothesis of giant convective elements
High-resolution spectrophotometry of the variable Ca II K line in the K2 IIIp star Alpha Boo was performed with the McMath Solar Telescope at Kitt Peak National Observatory and an experimental SEC vidicon camera. The results are compared with Copernicus observations of the Mg II h and k lines and with earlier Ca II data. It is found that either of two states may typically occur in the Arcturus chromosphere. From comparison with the results of model calculations for expanding chromospheres, it is concluded that these correspond respectively to a 'normal' state in which the mass loss is less than one billionth of a solar mass per year and an 'abnormal' state in which the mass loss is about 8 billionths of a solar mass per year. In the latter case, the expansion velocity is around 13 km/s at optical depth unity in the K-line, which exceeds the local sound speed. It is suggested that the abnormal state represents the rise to the photosphere of a very large convective element, as hypothesized for red giants by Schwarzschild (1975).
Chiu, H. Y.↗
Super-resolution imaging reveals resistance to mass transfer in functionalized stationary phases
Chemical separations are costly in terms of energy, time, and money. Separation methods are optimized with inefficient trial-and-error approaches that lack insight into the molecular dynamics that lead to the success or failure of a separation and, hence, ways to improve the process. We perform super-resolution imaging of fluorescent analytes in five different commercial liquid chromatography materials. Unexpectedly, we observe that chemical functionalization can block more than 50% of the material’s porous interior, rendering it inaccessible to small-molecule analytes. Only in situ imaging unveils the inaccessibility when compared to the industry-accepted ex situ characterization methods. Selectively removing some of the functionalization with solvent restores pore access without substantially altering the single-molecule kinetics that underlie the separation and agree with bulk chromatography measurements. Our molecular results determine that commercial “fully porous” stationary phases are over-functionalized and provide an alternative avenue to characterize and direct separation material design from the bottom-up.
Science & Technology - Other Topics↗
Preliminary Evidence of Gas-Phase Water Splitting on Holmium Nitrogen Oxide Clusters
Preliminary Evidence of Gas-Phase Water Splitting on Holmium Nitrogen Oxide Clusters Christopher A. Zarzana1, Makayla R. Baxter , Introduction: Molecular hydrogen is a potential energy carrier that could be used to help implement a clean energy economy if it is generated from splitting of water. Improvements in the efficiencies of water-splitting electrolyzers relies on development of novel materials with enhanced performance. However, research in this area is slowed due to underdeveloped understanding of the mechanisms of device performance due to challenges interrogating the fundamental chemical reactions at play in bulk materials. Studies of the intrinsic reactivity of clusters that are representative of the reactive sites of these materials can increase understanding of the fundamental reaction mechanisms involved in hydrogen production, allowing for more efficient development of new water-splitting materials. Methods: Holmium tetranitrato ([Ho(NO3)4]-) clusters were generated in gas-phase using the electrospray ionization source of a Bruker (Billerica, MA, USA) micrOTOF-Q II quadrupole time-of-flight mass spectrometer. Spray solutions consisted of aqueous holmium (Ho) nitrate solutions (at nominally 3 mM) diluted to 30 µM in acetonitrile. The holmium (Ho) tetranitrato clusters were isolated using the quadrupole and were subsequently activated and allowed to react with background water in the collision cell. High resolution, high mass accuracy spectra were recorded using the time-of-flight. Mass accuracy was ensured using external calibration with Agilent (Santa Clara, CA, USA) ESI-L Low Concentration tuning mix. Preliminary data: Collisional activation of the holmium tetranitrato complexes ([Ln(NO3)4]-) resulted in an expected series of ions resulting from the loss of ·NO and ·NO2. This included an ion at m/z = 382.885 assigned as [HoO2(NO3)3]- (theoretical m/z=382.884, error=-1.2 ppm), resulting from loss of ·NO, and an ion at m/z=366.890 assigned as [HoO(NO3)3]- (theorical m/z=366.889, error=-1.8 ppm), resulting from loss of ·NO2. Additional ions were detected that would result from more complicated losses from [Ho(NO3)4]-, including ions at m/z=320.898 assigned as [HoO2(NO3)2]- (theoretical m/z=320.896, error=-4.9 ppm), at m/z=304.904 assigned as [HoO(NO3)2]- (theoretical m/z=304.901, error=-8.1 ppm, very low signal), and at m/z=288.908 assigned as [Ho(NO3)2]- (theoretical m/z=288.907, error=-3.4 ppm). This ion series would arise from loss of some combination of ·NO, ·NO2, and ·NO3, although it is not known whether these losses occur sequentially (e.g. loss of ·NO and ·NO3 to yield [HoO2(NO3)2]-) or as a single species (e.g. direct loss of N2O4). These ions were accompanied by a complementary series representing addition of a single water molecule. This included an ion at m/z=338.908 assigned as [HoO2(NO3)2H2O]- (theoretical m/z=338.907, error=-4.1 ppm), an ion at m/z=322.912 assigned as [HoO(NO3)2H2O]- (theoretical m/z=322.912, error=1.2 ppm), and an ion at m/z=306.918 assigned as [Ho(NO3)2H2O]-, (theoretical m/z=306.918, error=-3.7 ppm). An additional hydrated ion was observed at m/z=276.921 assigned as [HoO2(NO3) H2O]- (theoretical m/z=276.919, error=-7.3 ppm), although corresponding dehydrated ion was not observed. An additional ion was observed at m/z=367.898 that has been assigned as [Ho(NO3)3OH]- (theoretical m/z=367.897, error=-2.5 ppm). It is hypothesized that this ion arises from addition of water to [Ho(NO3)3]- followed by elimination of a hydrogen radical. Neither [Ho(NO3)3]- nor [Ho(NO3)3H2O]- were detected, suggesting that, if the hypothesis is correct, addition of water to [Ho(NO3)3]- and its subsequent splitting is rapid. Elimination of HNO3 from [Ho(NO3)4H2O]- could also yield [Ho(NO3)3OH]-; however, no [Ho(NO3)4H2O]- ions were observed. Novelty: Potential evidence of water splitting on gas-phase lanthanide clusters offers a way to study the intrinsic reactivity of hydrogen-generation materials.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Selective Detection of Diglycolamide Diastereomers By Metal-Ligand Cluster Formation
Introduction (120 words): Differentiation of isomers using mass spectrometry is a challenge, as these species tend to produce ions of identical mass-to-charge ratio. Therefore, separation with mass spectrometry must rely on chemical differences between isomeric species. Separation of stereoisomers is especially challenging, as these species often have very similar chemistry. However, recent investigations of the solvent extraction behavior of diastereomers of diglycolamide molecules have shown that different stereoisomers can have significantly different lanthanide extraction efficiencies. These studies showed that the R,S stereoisomer of 2,2'-oxybis(N,N-dioctylpropanamide efficiently extracts lanthanides, while the S,S stereoisomer does not. Thus, gas-phase metal complexation may provide a pathway for differentiating these species using mass spectrometry. Methods (120 words): Europium, samarium, and holmium clusters with the R,S, and the S,S diastereomers of 2,2'-oxybis(N,N-didecylpropanamide (trivially tetradecyl diglycolamide, or mTDDGA) were generated in gas-phase using the electrospray ionization source of a Bruker (Billerica, MA, USA) micrOTOF-Q II quadrupole time-of-flight mass spectrometer. Solutions of aqueous lanthanide nitrate and diglycolamide ligands in 2-propanol were added to 50%:50% by volume acetonitrile:2-propanol to generate the spray solutions. Ligand concentration was maintained at approximately 6 µM, while lanthanide concentration was maintained at either 6 µM or 30 µM . High resolution, high mass accuracy spectra were recorded using the time-of-flight. Mass accuracy was ensured using external calibration with Agilent (Santa Clara, CA, USA) ESI-L Low Concentration tuning mix. Preliminary data (300 words): Electrospray of solutions containing only R,S-mTDDGA or S,S-m-TDDGA yield abundant peaks at m/z= 721.7, corresponding to [mTDDGA+H]+1, m/z = 743.7, corresponding to [mTDDGA+Na]+1, and m/z = 1464.4, corresponding to the sodium-bound dimer, [Na(mTDDGA)2]+1. Spray of solutions containing 6 µM europium (Eu) with 3 µM R,S-mTDDGA produced an abundant cluster ion with an isotopic envelope centered at m/z=772.0, corresponding to [Eu(R,S-mTDDGA)3]3+. Europium-containing cluster ions with isotopic envelopes apexing at m/z = 1012.3 and 1189.0 correspond to the [Eu(R,S-mTDDGA)4]3+ and [Eu(R,S-mTDDGA)5]3+ cluster ions, respectively. Protonated and sodiated R,S-mTDDGA are present as well, along with the sodium-bound dimer. In contrast, spray of solutions containing 6 µM europium (Eu) with 3 µM S,S-mTDDGA diastereomer yielded only protonated and sodiated ligand ions; no Eu- S,S-mTDDGA ions were present. This mirrors the solution-phase behavior, where the S,S diestereomer extracts lanthanides with significantly less efficiency than the R,S diestereomer. Experiments with holmium and samarium yielded the same results. Increasing the lanthanide concentration to 30 µM resulted in limited formation of lanthanide-S,S-mTDDGA clusters. However, the abundance of the [Ln(S,S-mTDDGA)3]3+ clusters remained low compared to the abundance of the protonated and sodiated ligand. Additionally, the abundance of the [Ln(R,S-mTDDGA)3]3+ cluster ion was significantly higher than that of the protonated and sodiated ligand in experiments with spray solutions containing 30 µM lanthanide with R,S-mTDDA, supporting the hypothesis that R,S-mTDDGA has a higher intrinsic affinity for the lanthanides than S,S-mTDDGA. Thus, the intrinsic complexation with lanthanides appears to offer a route to differentiate diglycolamide diestereomers in the gas-phase. Novelty (20): Stereoisomers can be differentiated in the gas phase by exploitation of differences in metal complexation chemistry.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
193 nm Ultraviolet Photodissociation for the Characterization of Singly Charged Proteoforms Generated by MALDI
MALDI imaging allows for the near-cellular profiling of proteoforms directly from microbial, plant, and mammalian samples. Despite detecting hundreds of proteoforms, identification of unknowns with only intact mass information remains a distinct challenge, even with high mass resolving power and mass accuracy. To this end, many supplementary methods have been used to create experimental databases for accurate mass matching, including bulk or spatially resolved bottom-up and/or top-down proteomics. Herein, we describe the application of 193 nm ultraviolet photodissociation (UVPD) for fragmentation of quadrupole isolated singly charged ubiquitin (m/z 8565) by MALDI-UVPD on a UHMR HF Orbitrap. This platform permitted the high-resolution accurate mass measurement of not just terminal fragments but also large internal fragments. Finally, the outlined workflow demonstrates the feasibility of top-down analyses of isolated MALDI protein ions and the potential toward more comprehensive characterization of proteoforms in MALDI imaging applications.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Sub-Kelvin High-Mass CCD Detectors for Dark Matter & Neutrino Searches (Technical Report)
This project aims to achieve two synergistic goals: 1) Develop a high mass low temperature CCD detector to measure charge transfer efficiency at sub-kelvin temperatures. 2) Use alternating surface bias at low voltages to produce NL phonons at the same rate as CDMS HV but without the need for HV bias. This will allow for a non-invasive NL amplification and paves the way for future single electron resolution large mass DM or CE NS detectors.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
Revealing Hidden Quinones Through Diagnostic MS² Fragmentation of Peptide–Quinone Adducts
Quinones are redox-active components of natural organic matter that mediate electron transfer and influence biogeochemical processes, but many quinones in pyrogenic organic matter (PyOM) remain unresolved because they ionize poorly by mass spectrometry. Here, we present a peptide-tagging approach to improve detection of cysteine-reactive electrophiles in PyOM, with quinones expected to be a dominant subset based on reaction chemistry and selectivity experiments. A cysteine-containing peptide was used to form Michael-addition adducts, enhancing electrospray ionization and enabling untargeted screening by high-performance liquid chromatography-high-resolution tandem mass spectrometry. The method was benchmarked with five quinone standards and applied to extracts from charred plant material as a discovery-level screen for cysteine-reactive targets. We identified 98 quinone-candidate adducts (mean neutral mass ~603 Da), of which more than 70% were not detectable in native MS1 data. Among formula-assigned features, hidden quinone candidates had median (O+N)/C of 0.391 and normalized oxidation state of carbon of -0.281, consistent with relatively low polarity and low oxidation state. These results reveal a previously inaccessible pool of hidden redox-active compounds in PyOM and provide a framework for prioritizing quinone-like electrophiles for confirmation and incorporation into models of fire-driven biogeochemical cycling.
LC-MS/MS↗
NASA's Space Lidar Measurements of Earth and Planetary Surfaces
A lidar instrument on a spacecraft was first used to measure planetary surface height and topography on the Apollo 15 mission to the Moon in 1971, The lidar was based around a flashlamp-pumped ruby laser, and the Apollo 15-17 missions used them to make a few thousand measurements of lunar surface height from orbit. With the advent of diode pumped lasers in the late 1980s, the lifetime, efficiency, resolution and mass of lasers and space lidar all improved dramatically. These advances were utilized in NASA space missions to map the shape and surface topography of Mars with > 600 million measurements, demonstrate initial space measurements of the Earth's topography, and measured the detailed shape of asteroid. NASA's ICESat mission in Earth orbit just completed its polar ice measurement mission with almost 2 billion measurements of the Earth's surface and atmosphere, and demonstrated measurements to Antarctica and Greenland with a height resolution of a few em. Space missions presently in cruise phase and in operation include those to Mercury and a topographic mapping mission of the Moon. Orbital lidar also have been used in experiments to demonstrate laser ranging over planetary distances, including laser pulse transmission from Earth to Mars orbit. Based on the demonstrated value of the measurements, lidar is now the preferred measurement approach for many new scientific space missions. Some missions planned by NASA include a planetary mission to measure the shape and dynamics of Europa, and several Earth orbiting missions to continue monitoring ice sheet heights, measure vegetation heights, assess atmospheric CO2 concentrations, and to map the Earth surface topographic heights with 5 m spatial resolution. This presentation will give an overview of history, ongoing work, and plans for using space lidar for measurements of the surfaces of the Earth and planets.
Abshire, James B.↗
Design and Demonstration of the Mars Organic Molecule Analyzer (MOMA) on the ExoMars 2018 Rover
The Mars Organic Molecule Analyzer (MOMA) investigation is a key astrobiology experiment scheduled to launch on the joint ESA-Roscosmos ExoMars 2018 rover mission. MOMA will examine the chemical composition of geological samples acquired from depths of up to two meters below the martian surface, where fragile organic molecules may be protected from destructive cosmic radiation and/or oxidative chemical reactions. The heart of the MOMA mass spectrometer subsystem (i.e., MOMA-MS) is a miniaturized linear ion trap (LIT) that supports two distinct modes of operation to detect: i) volatile and semi-volatile, low-to-moderate mass organics (less than or equal to 500 Da) via pyrolysis coupled with gas chromatography mass spectrometry (pyr/GCMS); and, ii) more refractory, moderate-to-high mass compounds (up to 1000 Da) via laser desorption (LDMS) at ambient Mars pressures. Additionally, the LIT mass analyzer enables selective ion trapping via multi-frequency waveform ion excitation (e.g., stored waveform inverse Fourier transform, or SWIFT), and structural characterization of complex molecules using tandem mass spectrometry (MSIMS). A high-fidelity Engineering Test Unit (ETU) of MOMAMS, including the LIT subassembly, dual-gun electron ionization source, micropirani pressure gauge, solenoid-driven aperture valve, redundant detection chains, and control electronics, has been built and tested at NASA GSFC under relevant operational conditions (pressure, temperature, etc.). Spaceflight qualifications of individual hardware components and integrated subassemblies have been validated through vibration, shock, thermal, lifetime, and performance evaluations. The ETU serves as a pathfinder for the flight model buildup, integration and test, as the ETU meets the form, fit and function of the flight unit that will be delivered to MPS in late 2015. To date, the ETU of MOMA-MS has been shown to meet or exceed all functional requirements, including mass range, resolution, accuracy, instrumental drift, and Iimit-of-detection specifications, thereby enabling the primary science objectives of the MOMA investigation and ExoMars 2018 mission.
Mars Organic Molecule Analyzer↗
Non-Targeted Direct Infusion Soluble Organic Analysis on a Tarda Meteorite Extract
The differences in chemistry, mineralogy, and structure of chondrites demonstrate thevariations in time/space of their forming regions in the solar nebula. In contrast, the variationof the organic reserves in the solar nebula is unclear. Furthermore, their subsequent evolutionof organic matter on the parent body is still under debate. In a previous study on Tagish Lake(C2 ungrouped) we showed that the primordial soluble organic matter (SOM) could bedistinguished from the parent body's secondary alteration threw mass distribution. This studywill show the Tarda meteorite SOM primordial distribution, using the model from ourprevious study. We discuss its organic reservoirs and secondary alteration effects. We alsocompare the character of the SOM with previously analysed Orgueil (CI). Sample and method: Tarda (fall, 2020) was classified as a C2 ungroup carbonaceouschondrite. Its bulk three oxygen isotope composition is distinct from other chondrite groupsbut similar to CI-chondrite-like and Yamato-type-like [1] values. We analysed themethanol/toluene extract using the high-resolution Orbitrap mass spectrometer at the Institutede Planétologie et d’Astrophysique Grenoble (IPAG) by directly injecting and ionizing theSOM and the solvent using the Heated Electrospray Ionization (HESI) source. After thespectra acquisition, the in-house developed post-processing data analysis tools, Attributor [2],was used. Preliminary Result: The SOM mass distribution of Tarda was well-fitted by the modelinterpreted as the primordial SOM distribution in Tagish lake. This common distributionpattern implies the presence of a common organic reservoir or SOM formation mechanism.Orgueil’s mass spectrum showed a more complex mass-distribution and seemed to be affectedby secondary processes. In contrast to the mass-distribution, SOM’s elemental abundance wasdistinct. The Tarda extract was enriched in S-bearing organic compounds which was incontrast to the Tagish Lake extract consisting of mostly CHNO elements. The presentationwill also discuss the application of our technique to Ryugu or Bennu samples. [1] Meteoriticalbulletin database [2] Orthous-Daunay, F. R. et al. (2019) Geochemical Journal, 53(1), 21-32
J Isa↗
The Mean Seasonal Cycle in Relative Sea Level From Satellite Altimetry and Gravimetry
Satellite altimetry and gravimetry are used to determine the mean seasonal cycle in relative sea level, a quantity relevant to coastal flooding and related applications. The main harmonics (annual, semiannual, terannual) are estimated from 25 years of gridded altimetry, while several conventional altimeter “corrections” (gravitational tide, pole tide, and inverted barometer) are restored. To transform from absolute to relative sea levels, a model of vertical land motion is developed from a high-resolution seasonal mass inversion estimated from satellite gravimetry. An adjustment for annual geocenter motion accounts for use of a center-of-mass reference frame in satellite orbit determination. A set of 544 test tide gauges, from which seasonal harmonics have been estimated from hourly measurements, is used to assess how accurately each adjustment to the altimeter data helps converge the results to true relative sea levels. At these gauges, the median annual and semiannual amplitudes are 7.1 cm and 2.2 cm, respectively. The root-mean-square differences with altimetry are 3.24 and 1.17 cm, respectively, which are reduced to 1.93 and 0.86 cm after restoration of corrections and adjustment for land motion. Example outliers highlight some limitations of present-day coastal altimetry owing to inadequate spatial resolution: upwelling and currents off Oregon and wave setup at Minamitori Island.
Richard D Ray↗
Photoaging of phenolic secondary organic aerosol in the aqueous phase: evolution of chemical and optical properties and effects of oxidants
Abstract. While gas-phase reactions are well established to have significant impacts on the mass concentration, chemical composition, and optical properties of secondary organic aerosol (SOA), the aqueous-phase aging of SOA remains poorly understood. In this study, we performed a series of long-duration photochemical aging experiments to investigate the evolution of the composition and light absorption of the aqueous SOA (aqSOA) from guaiacyl acetone (GA), a semivolatile phenolic carbonyl that is common in biomass burning smoke. The aqSOA was produced from reactions of GA with hydroxyl radical (•OH-aqSOA) or a triplet excited state of organic carbon (3C∗-aqSOA) and was then photoaged in water under conditions that simulate sunlight exposure in northern California for up to 48 h. The effects of increasing aqueous-phase •OH or 3C∗ concentration on the photoaging of the aqSOA were also studied. High-resolution aerosol mass spectrometry (HR-AMS) and UV–Vis spectroscopy were utilized to characterize the composition and the light absorptivity of the aqSOA and to track their changes during aging. Compared to •OH-aqSOA, the 3C∗-aqSOA is produced more rapidly and shows less oxidation, a greater abundance of oligomers, and higher light absorption. Prolonged photoaging promotes fragmentation and the formation of more volatile and less light-absorbing products. More than half of the initial aqSOA mass is lost, and substantial photobleaching occurs after 10.5 h of prolonged aging under simulated sunlight illumination for 3C∗-aqSOA and 48 h for •OH-aqSOA. By performing positive matrix factorization (PMF) analysis of the combined HR-AMS and UV–Vis spectral data, we resolved three generations of aqSOA with distinctly different chemical and optical properties. The first-generation aqSOA shows significant oligomer formation and enhanced light absorption at 340–400 nm. The second-generation aqSOA is enriched in functionalized GA species and has the highest mass absorption coefficients in 300–500 nm, while the third-generation aqSOA contains more fragmented products and is the least light absorbing. These results suggest that intermediately aged phenolic aqSOA is more light absorbing than other generations, and that the light absorptivity of phenolic aqSOA results from a competition between brown carbon (BrC) formation and photobleaching, which is dependent on aging time. Although photoaging generally increases the oxidation of aqSOA, a slightly decreased O/C of the •OH-aqSOA is observed after 48 h of prolonged photoaging with additional •OH exposure. This is likely due to greater fragmentation and evaporation of highly oxidized compounds. Increased oxidant concentration accelerates the transformation of aqSOA and promotes the decay of BrC chromophores, leading to faster mass reduction and photobleaching. In addition, compared with •OH, photoaging by 3C∗ produces more low-volatility functionalized products, which counterbalances part of the aqSOA mass loss due to fragmentation and evaporation.
54 ENVIRONMENTAL SCIENCES↗
Applying the core-satellite species concept: Characteristics of rare and common riverine dissolved organic matter
Introduction: Dissolved organic matter (DOM) composition varies over space and time, with a multitude of factors driving the presence or absence of each compound found in the complex DOM mixture. Compounds ubiquitously present across a wide range of river systems (hereafter termed core compounds) may differ in chemical composition and reactivity from compounds present in only a few settings (hereafter termed satellite compounds). Here, we investigated the spatial patterns in DOM molecular formulae presence (occupancy) in surface water and sediments across 97 river corridors at a continental scale using the “Worldwide Hydrobiogeochemical Observation Network for Dynamic River Systems—WHONDRS” research consortium. Methods: We used a novel data-driven approach to identify core and satellite compounds and compared their molecular properties identified with Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS). Results: In this work, we found that core compounds clustered around intermediate hydrogen/carbon and oxygen/carbon ratios across both sediment and surface water samples, whereas the satellite compounds varied widely in their elemental composition. Within surface water samples, core compounds were dominated by lignin-like formulae, whereas protein-like formulae dominated the core pool in sediment samples. In contrast, satellite molecular formulae were more evenly distributed between compound classes in both sediment and water molecules. Core compounds found in both sediment and water exhibited lower molecular mass, lower oxidation state, and a higher degree of aromaticity, and were inferred to be more persistent than global satellite compounds. Higher putative biochemical transformations were found in core than satellite compounds, suggesting that the core pool was more processed. Discussion: The observed differences in chemical properties of core and satellite compounds point to potential differences in their sources and contribution to DOM processing in river corridors. Overall, our work points to the potential of data-driven approaches separating rare and common compounds to reduce some of the complexity inherent in studying riverine DOM.
54 ENVIRONMENTAL SCIENCES↗
Natively oxidized amino acid residues in the spinach PS I-LHC I supercomplex
Reactive oxygen species (ROS) production is an unavoidable byproduct of electron transport under aerobic conditions. Photosystem II (PS II), the cytochrome b 6 /ƒ complex and Photosystem I (PS I) are all demonstrated sources of ROS. It has been proposed that PS I produces substantial levels of a variety of ROS including O$_{2}^{·-}$, 1 O 2 , H 2 O 2 and, possibly, ∙OH, however, the site(s) of ROS production within PS I has been the subject of significant debate. We hypothesize that amino acid residues close to the sites of ROS generation will be more susceptible to oxidative modification than distant residues. In this study, we have identified oxidized amino acid residues in spinach PS I which was isolated from field-grown spinach. The modified residues were identified by high-resolution tandem mass spectrometry. As expected, many of the modified residues lie on the surface of the complex. However, a well-defined group of oxidized residues, both buried and surface-exposed, lead from the chl a’ of P 700 to the surface of PS I. These residues (PsaB: 609 F, 611 E, 617 M, 619 W, 620 L, and PsaF: 139 L, 142 A, 143 D) may identify a preferred route for ROS, probably 1 O 2 , to egress the complex from the vicinity of P 700 . Additionally, two buried residues located in close proximity to A1B (PsaB: 712 H and 714 S) were modified, which may be consistent with A 1B being a source of O$_{2}^{·-}$. Surprisingly, no oxidatively modified residues were identified in close proximity to the 4Fe-FS clusters F X , F A or F B . These cofactors had been identified as a principal targets for ROS damage in the photosystem. Finally, a large number of residues located in the hydrophobic cores of Lhca1-Lhca4 are oxidatively modified. These appear to be the result of 1 O 2 production by the distal antennae for the photosystem.
59 BASIC BIOLOGICAL SCIENCES↗
Sub-resolution modeling of the apparent mass loss in quantitative broadband X-ray radiography
Not Available
Rahman, Naveed↗