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At least 397 records · Page 22

UMLS users and uses: a current overview

Abstract The US National Library of Medicine regularly collects summary data on direct use of Unified Medical Language System (UMLS) resources. The summary data sources include UMLS user registration data, required annual reports submitted by registered users, and statistics on downloads and application programming interface calls. In 2019, the National Library of Medicine analyzed the summary data on 2018 UMLS use. The library also conducted a scoping review of the literature to provide additional intelligence about the research uses of UMLS as input to a planned 2020 review of UMLS production methods and priorities. 5043 direct users of UMLS data and tools downloaded 4402 copies of the UMLS resources and issued 66 130 951 UMLS application programming interface requests in 2018. The annual reports and the scoping review results agree that the primary UMLS uses are to process and interpret text and facilitate mapping or linking between terminologies. These uses align with the original stated purpose of the UMLS.

Amos, Liz↗

GeoAI for Public Health

Infectious disease spread within the human population can be conceptualized as a complex system composed of individuals who interact and transmit viruses through spatio-temporal processes that manifest across and between scales. The complexity of this system ultimately means that the spread of infectious diseases is difficult to understand, predict, and respond to effectively. Research interest in GeoAI for public health has been fueled by the increased availability of rich data sources such as human mobility data, OpenStreetMap data, contact tracing data, symptomatic online surveys, retail and commerce data, genomics data, and more. This data availability has resulted in a wide variety of data-driven solutions for infectious disease spread prediction which show potential in enhancing our forecasting capabilities. This chapter (1) motivates the need for AI-based solutions in public health by showing the heterogeneity of human behavior related to health, (2) provides a brief survey of current state-of-the-art solutions using AI for infectious disease spread prediction, (3) describes a use-case of using large-scale human mobility data to inform AI models for the prediction of infectious disease spread in a city, and (4) provides future research directions and ideas.

Zufle, Andreas↗

Development of National New Construction Weighting Factors for the Commercial Building Prototype Analyses (2003-2018)

The U.S. Department of Energy (DOE), Office of Building Technologies tasked Pacific Northwest National Laboratory to develop construction weights for various commercial building categories for the purpose of estimating weighted national energy savings from the development of ANSI/ASHRAE/IESNA Standard 90.1-2019 compared to ANSI/ASHRAE/IESNA Standard 90.1-2016. Disaggregate construction volume data was acquired from the McGraw Hill Construction Database for the years 2003-2018 and analyzed to develop detailed construction weights by climate zones, subzones and by states. These weights are provided in this report and will be subsequently used in developing a weighted national energy savings estimate for the impact of the 2019 standard. For the current update, PNNL reviewed the same data source with the latest construction data for the years 2003-2018.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Review of the Nuclear Energy Agency (NEA) Ancillary Thermodynamic Database (TDB) Volume (DRAFT REV. 0)

The Nuclear Energy Agency (NEA) Ancillary data volume comprises thermodynamic data of mineral and aqueous species that, in addition to Auxiliary Data (as referred to in previous NEA thermodynamic data volumes), is necessary to calculations of chemical interactions relevant to radioactive waste management and nuclear energy. This SAND report is a review of the NEA Ancillary data critical reviews volume of thermodynamic data parameters. The review given in this report mainly involves data comparison with other thermodynamic data assessments, analysis of thermodynamic parameters, and examination of data sources. Only new and updated data parameters were considered in this review. Overall, no major inconsistencies or errors were found as allowed by the comparisons conducted in this review. Some remarks were noted, for example, on the consideration of relevant studies and/or comparisons on the analysis and retrieval of thermodynamic data parameters not cited in the respective sections.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Development of National New Construction Weighting Factors for the Commercial Building Prototype Analyses (2008-2022)

The U.S. Department of Energy (DOE) tasked Pacific Northwest National Laboratory (PNNL) with updating commercial building construction weights for the purpose of estimating national and state-by-state energy savings impacts of changes made to various commercial energy codes and standards. A similar activity was last completed by PNNL in 2020 using disaggregate construction volume data acquired from the Dodge Data & Analytics database (formerly McGraw Hill) for the years 2003-2018 (Lei et al, 2020). As time passes, changes in economic and social demand reshape construction volume trends. For the current update, PNNL reviewed the same data source with the latest construction data for the years 2008-2022. For commercial building analyses, PNNL typically uses a suite of 16 prototype buildings simulated in the 19 ASHRAE climate zones with 16 of them present in the United States. The 2008-2022 commercial building weighting factors were derived using the same approach employed to develop the 2003-2018 set (Lei et al, 2020). Applying the construction volume data from the database to the prototypes and climate zones resulted in the following new construction area-based weighting factors. Table ES.1 shows the weighting factors including all building categories found in the database, and Table ES.2 shows the weighting factors normalized to include only buildings represented by the 16 prototypes. Section 3.0 also includes national- and state-level weighting factors by area and building count.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

A Play-Based Exploration of CO 2 Storage in the Illinois Basin (Final Technical Report)

This report documents the results of "A Play-Based Exploration of CO₂ Storage in the Illinois Basin" (DE-FE0032366), a project funded by the U.S. Department of Energy Office of Fossil Energy and Carbon Management and conducted by the Illinois State Geological Survey (ISGS) at the University of Illinois Urbana-Champaign in partnership with Visage Energy. The project adapted play-based exploration (PBE), a systematic basin-scale evaluation methodology from the petroleum industry, to screen areas of Illinois for commercial geologic carbon storage (GCS) in Cambro-Ordovician strata. The traditional play concept was expanded to encompass three play element groups, subsurface geologic factors, surface features, and societal factors, yielding 24 play elements with defensible suitability criteria applied through a five-tier classification scheme. An integrated geospatial database was assembled from ISGS, MGSC, MRCI, NATCARB, and public data sources, supported by significant data-improvement work including correction of legacy well locations, digitization of more than 1,300 well construction records using the DOE CATALOG team's OGRRE tool, compilation of a statewide 2D seismic database, and production of a refined fault and fold geodatabase.

58 GEOSCIENCES↗

KS4A-Omics1.0_FspDS682

Soil fungi facilitate the translocation of inorganic nutrients from soil minerals to other microorganisms and plants. This ability is particularly advantageous in impoverished soils, because fungal mycelial networks can bridge otherwise spatially disconnected and inaccessible nutrient hotspots. However, the molecular mechanisms underlying fungal mineral weathering and transport through soil remains poorly understood. Here, we addressed this knowledge gap by directly visualizing nutrient acquisition and transport through fungal hyphae in a mineral doped soil micromodel using a multimodal imaging approach. Here, we observed how a representative of common saprotrophic soil fungi, Fusarium sp. DS 682, exhibited a mechanosensory response (thigmotropism) around obstacles and through pore spaces (~12 μm) in the presence of minerals.This study establishes the significance of fungal biology and nutrient translocation mechanisms in maintaining fungal growth under water and nutrient limitations in a soil-like microenvironment, using a high-throughput multi-omic analysis approach. Data package KS4A-Omics.1.0_FspDS682 (Publication: Fungal Mineral Weathering Mechanisms Revealed Through Direct Molecular Visualization) contents reported here are the first version (1.0) and contain pre- and post-processed data using high throughput data capture technologies for multi-omic analysis and integration, this data package contains raw and post-processed experimental data for X-Ray Absorption Near Edge Structure Spectroscopy (XANES/XRF), Optical Microscopy, Proteomics, Scanning Electron Microscope (SEM), Time-of-Flight Secondary Ion Mass Spectroscopy (ToF-SIMS), X-Ray Diffraction Spectroscopy (XRD) files, and X- Ray Photoelectron Spectroscopy (XPS) using EMSL capabilities. This data package DOI contains a comprehensive collection of high-throughput multi-omics data and process metadata catalog. Support files include additional data download contents “Read Me” with dataset descriptor information and data source method application ontologies (see data dictionary section). Reported data download content is structured for compliance with reported guidelines provided by community standard initiatives and publisher stakeholder policies supporting FAIR data principles.

47 OTHER INSTRUMENTATION↗

Thermal radiation analysis system (TRASYS)

The Thermal Radiation Analysis System, TRASYS, is a digital computer software system with generalized capability to solve the radiation-related aspects of thermal analysis problems. When used in conjunction with a generalized thermal analyzer program any thermal problem that can be expressed in terms of a lumped parameter R-C thermal network can be solved. The function of TRASYS is twofold. It provides: (1) internode radiation interchange data; and (2) incident and absorbed heat rate data from environmental radiant heat sources. Data of both types is provided in a format directly usable by the thermal analyzer programs. One of the primary features of TRASYS is that it allows the user to write his own executive or driver program which organizes and directs the program library routines toward solution of each specific problem in the most expeditious manner. The user also may write his own output routines, thus the system data output can directly interface with any thermal analyzer using the R-C network concept.

Jensen, C. L.↗

Stratospheric long waves - Comparison of thermal structure in the Northern and Southern Hemispheres

Stratospheric radiance and temperature data obtained in the Northern and Southern Hemispheres during 1971 and 1972 are analyzed in order to compare planetary-wave behavior in both hemispheres. The data sources include the reduced radiance data of the Nimbus 4 selective chopper radiometer, National Meteorological Center gridded data, and Eole constant-level balloon data. Large-amplitude wave oscillations with energy in the period range from 20 to 30 days are observed along with the eastward propagation of planetary wave 2 in the Southern Hemisphere and a strong vertical coherence in wave phase at all levels between 200 mb and the upper stratosphere. The results show that: (1) despite stationary forcing, eastward phase progression occurs for wave 2 in the south as well as during the amplification phase of wave 1 in both hemispheres; (2) the upper stratosphere in midwinter contains regions of apparent barotropic instability, especially in the south; (3) wave number 2 amplitudes grow from very low values in early winter to high values in late winter; (4) the meridional amplitude structure is similar in the upper stratosphere in both hemispheres; and (5) the equatorward extent of waves is directly related to zonal wind speed in the upper stratosphere.

Leovy, C. B.↗

Thermal radiation analysis system (TRASYS 2), programmer's manual

TRASYS, the Thermal Radiation Analysis System, is a digital computer software system with a generalized capability to solve the radiation-related aspects of thermal analysis problems. When used in conjunction with a generalized thermal analysis program such as the Systems Improved Numerical Differencing Analyzer (SINDA) program, any thermal problem that can be expressed in terms of a lumped parameter, radiation conductor thermal network can be solved. The function of TRASYS is twofold. It provides: 1) Internode radiation interchange data; 2) Incident and absorbed heat rate data from environmental radiant heat sources. Data of both types are provided in a format directly usable by the thermal analyzer programs.

Connor, R. J.↗

User's Manual: Thermal Radiation Analysis System TRASYS 2

A digital computer software system with generalized capability to solve the radiation related aspects of thermal analysis problems is presented. When used in conjunction with a generalized thermal analysis program such as the systems improved numerical differencing analyzer program, any thermal problem that can be expressed in terms of a lumped parameter R-C thermal network can be solved. The function of TRASYS is twofold. It provides: (a) Internode radiation interchange data; and (b) Incident and absorbed heat rate data from environmental radiant heat sources. Data of both types is provided in a format directly usable by the thermal analyzer programs. The system allows the user to write his own executive or driver program which organizes and directs the program library routines toward solution of each specific problem in the most expeditious manner. The user also may write his own output routines, thus the system data output can directly interface with any thermal analyzer using the R-C network concept.

Jensen, C. L.↗

Environmental data display

Methods for using a combination of computer-generated color graphics and image processing techniques to display a large data base of environment information are described. The data source can be either field data or mathematical models, reduced to summary statistics that characterize the data field as a whole. Sharp gradients are plotted into contour plots, which can also feature shades, degree of brightness, and saturation levels for fine-tuning the image. The basic concepts of digital image processing are reviewed, including location of the pixels, intensity mapping operations, pseudocolor enhancements, neighborhood averaging, and smoothing. Sample applications are presented in terms of emissions and air quality distributions over the south coast air basin of southern California.

Hussey, K. J.↗

Errors of five-day mean surface wind and temperature conditions due to inadequate sampling

Surface meteorological reports of wind components, wind speed, air temperature, and sea-surface temperature from buoys located in equatorial and midlatitude regions are used in a simulation of random sampling to determine errors of the calculated means due to inadequate sampling. Subsampling the data with several different sample sizes leads to estimates of the accuracy of the subsampled means. The number N of random observations needed to compute mean winds with chosen accuracies of 0.5 (N sub 0.5) and 1.0 (N sub 1,0) m/s and mean air and sea surface temperatures with chosen accuracies of 0.1 (N sub 0.1) and 0.2 (N sub 0.2) C were calculated for each 5-day and 30-day period in the buoy datasets. Mean values of N for the various accuracies and datasets are given. A second-order polynomial relation is established between N and the variability of the data record. This relationship demonstrates that for the same accuracy, N increases as the variability of the data record increases. The relationship is also independent of the data source. Volunteer-observing ship data do not satisfy the recommended minimum number of observations for obtaining 0.5 m/s and 0.2 C accuracy for most locations. The effect of having remotely sensed data is discussed.

Legler, David M.↗

The determination of operational and support requirements and costs during the conceptual design of space systems

The first year of research to provide NASA support in predicting operational and support parameters and costs of proposed space systems is reported. Some of the specific research objectives were (1) to develop a methodology for deriving reliability and maintainability parameters and, based upon their estimates, determine the operational capability and support costs, and (2) to identify data sources and establish an initial data base to implement the methodology. Implementation of the methodology is accomplished through the development of a comprehensive computer model. While the model appears to work reasonably well when applied to aircraft systems, it was not accurate when used for space systems. The model is dynamic and should be updated as new data become available. It is particularly important to integrate the current aircraft data base with data obtained from the Space Shuttle and other space systems since subsystems unique to a space vehicle require data not available from aircraft. This research only addressed the major subsystems on the vehicle.

Ebeling, Charles↗

Smart Sensors' Role in Integrated System Health Management

During the last decade, there has been a major effort in the aerospace industry to reduce the cost per pond of payload and become competitive in the international market. Competition from Europe, Japan, and China has reduced this cost to almost a third from 1990 to 2000. This cost has leveled in recent years to an average price of around $12,000/pound of payload. One of NASA's goals is to promote the development of technologies to reduce this cost by a factor of 10 or more Exploration of space, specially manned exploration missions, involves very complex launch and flight vehicles, associated ground support systems, and extensive human support during all phases of the mission. When considering the Space Shuttle Program, we can see that vehicle and ground support systems' processing, operation, and maintenance represent a large percentage of the program cost and time. Reducing operating, processing and maintenance costs will greatly reduce the cost of Exploration programs. The Integrated System Health Management (ISHM) concept is one of the technologies that will help reduce these operating, processing and maintenance costs. ISHM is an integrated health monitoring system applicable to both flight and ground systems. It automatically and autonomously acquires information from sensors and actuators and processes that information using the ISHM-embedded knowledge. As a result, it establishes the health of the system based on the acquired information and its prior knowledge. When this concept is fully implemented, ISHM systems shall be able to perform failure prediction and remediation before actual hard failures occurs, preventing its costly consequences. Data sources, sensors, and their associated data acquisition systems, constitute the foundation of the system. A smart sensing architecture is required to support the acquisition of reliable, high quality data, required by the ISHM. A thorough definition of the smart sensor architectures, their embedded diagnostic agents, and communication protocols need to be established and standardized to allow the embedding and exchange of health information among sensors and ISHM. This workshop is aimed to foster the exchange of ideas and lessons learned between government, industry and academia to aid in the establishment of ISHM (and smart sensors) standards and guidelines as well as to identify present technology gaps that will have to be overcome to successfully achieve this goal.

Perotti, Jose M.↗

Linked Open Data in the Global Change Information System (GCIS)

The U.S. Global Change Research Program (http://globalchange.gov) coordinates and integrates federal research on changes in the global environment and their implications for society. The USGCRP is developing a Global Change Information System (GCIS) that will centralize access to data and information related to global change across the U.S. federal government. The first implementation will focus on the 2013 National Climate Assessment (NCA) . (http://assessment.globalchange.gov) The NCA integrates, evaluates, and interprets the findings of the USGCRP; analyzes the effects of global change on the natural environment, agriculture, energy production and use, land and water resources, transportation, human health and welfare, human social systems, and biological diversity; and analyzes current trends in global change, both human-induced and natural, and projects major trends for the subsequent 25 to 100 years. The NCA has received over 500 distinct technical inputs to the process, many of which are reports distilling and synthesizing even more information, coming from thousands of individuals around the federal, state and local governments, academic institutions and non-governmental organizations. The GCIS will present a web-based version of the NCA including annotations linking the findings and content of the NCA with the scientific research, datasets, models, observations, etc. that led to its conclusions. It will use semantic tagging and a linked data approach, assigning globally unique, persistent, resolvable identifiers to all of the related entities and capturing and presenting the relationships between them, both internally and referencing out to other linked data sources and back to agency data centers. The developing W3C PROV Data Model and ontology will be used to capture the provenance trail and present it in both human readable web pages and machine readable formats such as RDF and SPARQL. This will improve visibility into the assessment process, increase understanding and reproducibility, and ultimately increase credibility and trust of the resulting report. Building on the foundation of the NCA, longer term plans for the GCIS include extending these capabilities throughout the U.S. Global Change Research Program, centralizing access to global change data and information across the thirteen agencies that comprise the program.

Tilmes, Curt A.↗