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At least 379 records · Page 21

Augmenting subspace optimization methods with linear bandits

In this work, we consider the framework of methods for unconstrained minimization that are, in each iteration, restricted to a model that is only a valid approximation to the objective function on some affine subspace containing an incumbent point. These methods are of practical interest in computational settings where derivative information is either expensive or impossible to obtain. Recent attention has been paid in the literature to employing randomized matrix sketching for generating the affine subspaces within this framework. We consider a relatively straightforward, deterministic augmentation of such a generic subspace optimization method. In particular, we consider a sequential optimization framework where actions consist of one-dimensional linear subspaces and rewards consist of (approximations to) the magnitudes of directional derivatives computed in the direction of the action subspace. Reward maximization in this context is consistent with maximizing lower bounds on descent guaranteed by first-order Taylor models. This sequential optimization problem can be analysed through the lens of dynamic regret. We modify an existing linear upper confidence bound (UCB) bandit method and prove sublinear dynamic regret in the subspace optimization setting. We demonstrate the efficacy of employing this linear UCB method in a setting where forward-mode algorithmic differentiation can provide directional derivatives in arbitrary directions and in a derivative-free setting. For the derivative-free setting, we propose SS-POUNDers, an extension of the derivative-free optimization method POUNDers that employs the linear UCB mechanism to identify promising subspaces. Our numerical experiments suggest a preference, in either computational setting, for employing a linear UCB mechanism within a subspace optimization method.

97 MATHEMATICS AND COMPUTING↗

A compact dication source for Ba 2+ tagging and heavy metal ion sensor development

Here, we present a tunable metal ion beam that delivers controllable ion currents in the picoamp range for testing of dry-phase ion sensors. Ion beams are formed by sequential atomic evaporation and single or multiple electron impact ionization, followed by acceleration into a sensing region. Controllability of the ionic charge state is achieved through tuning of electrode potentials that influence the retention time in the ionization region. Barium, lead, and cadmium samples have been used to test the system, with ion currents identified and quantified using a quadrupole mass analyzer. Realization of a clean Ba 2+ ion beam within a bench-top system represents an important technical advance toward the development and characterization of barium tagging systems for neutrinoless double beta decay searches in xenon gas. This system also provides a testbed for investigation of novel ion sensing methodologies for environmental assay applications, with dication beams of Pb 2+ and Cd 2+ also demonstrated for this purpose.

47 OTHER INSTRUMENTATION↗

Spatially structured bacterial interactions alter algal carbon flow to bacteria

Phytoplankton account for nearly half of global photosynthetic carbon fixation, and the fate of that carbon is regulated in large part by microbial food web processing. We currently lack a mechanistic understanding of how interactions among heterotrophic bacteria impact the fate of photosynthetically fixed carbon. Here, we used a set of bacterial isolates capable of growing on exudates from the diatom Phaeodactylum tricornutum to investigate how bacteria-bacteria interactions affect the balance between exudate remineralization and incorporation into biomass. With exometabolomics and genome-scale metabolic modeling, we estimated the degree of resource competition between bacterial pairs. In a sequential spent media experiment, we found that pairwise interactions were more beneficial than predicted based on resource competition alone, and 30% exhibited facilitative interactions. To link this to carbon fate, we used single-cell isotope tracing in a custom cultivation system to compare the impact of different "primary" bacterial strains in close proximity to live P. tricornutum on a distal "secondary" strain. We found that a primary strain with a high degree of competition decreased secondary strain carbon drawdown by 51% at the single-cell level, providing a quantitative metric for the "cost" of competition on algal carbon fate. Additionally, a primary strain classified as facilitative based on sequential interactions increased total algal-derived carbon assimilation by 7.6 times, integrated over all members, compared to the competitive primary strain. Our findings suggest that the degree of interaction between bacteria along a spectrum from competitive to facilitative is directly linked to algal carbon drawdown.

genome-scale metabolic model↗

A Single Xyloglucan Xylosyltransferase Is Sufficient for Generation of the XXXG Xylosylation Pattern of Xyloglucan

ABSTRACT Xyloglucan is the most abundant hemicellulose in the primary cell walls of dicots. Dicot xyloglucan is the XXXG type consisting of repeating units of three consecutive xylosylated Glc residues followed by one unsubstituted Glc. Its xylosylation is catalyzed by xyloglucan 6-xylosyltransferases (XXTs) and there exist five XXTs (AtXXT1-5) in Arabidopsis. While AtXXT1 and AtXXT2 have been shown to add the first two Xyl residues in the XXXG repeat, which XXTs are responsible for the addition of the third Xyl residue remains elusive although AtXXT5 was a proposed candidate. In this report, we generated recombinant proteins of all five Arabidopsis XXTs and one rice XXT (OsXXT1) in the mammalian HEK293 cells and investigated their ability to sequentially xylosylate Glc residues to generate the XXXG xylosylation pattern. We found that like AtXXT1/2, AtXXT4 and OsXXT1 could efficiently xylosylate the cellohexaose (G6) acceptor to produce mono- and di-xylosylated G6, whereas AtXXT5 was only barely capable of adding one Xyl onto G6. When AtXXT1-catalyzed products were used as acceptors, AtXXT1/2/4 and OsXXT1, but not AtXXT5, were able to xylosylate additional Glc residues to generate tri- and tetra-xylosylated G6. Further characterization of the tri- and tetra-xylosylated G6 revealed that they had the sequence of GXXXGG and GXXXXG with three and four consecutive xylosylated Glc residues, respectively. In addition, we have found that although tri-xylosylation occurred on G6, cello-oligomers with a degree of polymerization of 3 to 5 could only be mono- and di-xylosylated. Together, these results indicate that each of AtXXT1/2/4 and OsXXT1 is capable of sequentially adding Xyl onto three contiguous Glc residues to generate the XXXG xylosylation pattern and these findings provide new insight into the biochemical mechanism underlying xyloglucan biosynthesis.

Cell Biology↗

Two-photon double photoionization of atomic Mg by ultrashort pulses: Variation of angular distributions with pulse length

We investigate the two-photon double ionization of atomic magnesium induced by ultrashort pulses. Though the initial and final state symmetries are comparable to the same process in helium, in stark contrast the range of photon energies for which nonsequential ionization is the only open pathway is narrow (less than 1 eV) in magnesium. Thus several sequential ionization pathways feature heavily in these processes. Nonetheless, it is found that for pulse durations between 0.25 and 2.0 fentoseconds, the joint angular dependence of the ejected electrons can depend sensitively on pulse length, varying between the strictly back-to-back ejection characteristic of nonsequential ionization to other distributions. The significance of excited-state correlating configurations in representing the initial state of magnesium is discussed in the light of their consequences for the resulting angular distributions at photon energies where sequential ionization can access intermediate states that lie nearby in energy, particularly for longer pulses.

74 ATOMIC AND MOLECULAR PHYSICS↗

Invariant-mass spectroscopy of O 14 excited states

Excited states in 14 O have been investigated both experimentally and theoretically. Experimentally, these states were produced via neutron-knockout reactions with a fast 15 O beam and the invariant-mass technique was employed to isolate the 1 p and 2 p decay channels and determine their branching ratios. The spectrum of excited states was also calculated with the shell model embedded in the continuum that treats bound and scattering states in a unified model. By comparing energies, widths, and decay branching patterns, spin and parity assignments for all experimentally observed levels below 8 MeV are made. This includes the location of the second 2 + state that we find is in near degeneracy with the third 0 + state. An interesting case of sequential 2 p decay through a pair of degenerate 13 N excited states with opposite parities was found where the interference between the two sequential decay pathways produces an unusual relative-angle distribution between the emitted protons.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Nuclear temperature and its dependence on the source neutron-proton asymmetry deduced using the Albergo thermometer

Albergo thermometers with double isotope, isotone and isobar yield ratio pairs with one proton or/and neutron difference are investigated. Without any extra sequential decay correction, a real temperature value of 4.9 ± 0.5 MeV is deduced from the yields of the experimentally reconstructed primary hot intermediate mass fragments (IMFs) from 64 Zn + 112 Sn collisions at 40 MeV/nucleon using the Albergo thermometer for the first time. An experimental sequential decay correction from the apparent temperatures to the real ones for twelve other reaction systems with different neutron-proton (N/Z) asymmetries in the same experiment, 70 Zn, 64 Ni on 112,124 Sn, 58,64 Ni, 197 Au, 232 Th at 40 MeV/nucleon, is performed using an empirical correction factor approach of Tsang et al. with the deduced 4.9 MeV temperature value. The dependence of nuclear temperature on the source N/Z asymmetry is further investigated using these deduced real source temperature values from the present thirteen systems. It is found that the deduced real source temperatures at the present source N/Z range show a rather weak dependence on the source N/Z asymmetry. In conclusion, by comparison between our previous results and those from other independent experiments, a consistent description for the N/Z asymmetry dependence of nuclear temperature is addressed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Restoring Distribution System Under Renewable Uncertainty Using Reinforcement Learning

Distributed energy resources (DERs) in distribution systems, including renewable generation, micro-turbine, and energy storage, can be used to restore critical loads following extreme events to increase grid resiliency. However, properly coordinating multiple DERs in the system for multi-step restoration process under renewable uncertainty and fuel availability is a complicated sequential optimal control problem. Due to its capability to handle system non-linearity and uncertainty, reinforcement learning (RL) stands out as a potentially powerful candidate in solving complex sequential control problems. Moreover, the offline training of RL provides excellent action readiness during online operation, making it suitable to problems such as load restoration, where in-time, correct and coordinated actions are needed. In this study, a distribution system prioritized load restoration based on a simplified single-bus system is studied: with imperfect renewable generation forecast, the performance of an RL controller is compared with that of a deterministic model predictive control (MPC). Our experiment results show that the RL controller is able to learn from experience, adapt to the imperfect forecast information and provide a more reliable restoration process when compared with the baseline controller.

61 RADIATION PROTECTION AND DOSIMETRY↗

Nonmagnetized Collisional Plasma Parameter Estimation From Two Frequency Signal Interrogation Attenuation

A nonmagnetized collisional plasma parameter estimator from two frequency signal interrogation attenuation is developed. The plasma parameters that are estimated are the plasma frequency, electron neutral momentum collision frequency, and the plasma thickness. The plasma frequency and electron neutral momentum collision frequency are considered uniform across the plasma thickness. The relative permittivity is defined, and the complex index of refraction is developed. Using this definition and applying the plasma frequency, electron neutral momentum collision frequency, the radial propagation frequency, and plasma thickness, an attenuation is determined for known cases. The development of the estimator is discussed. The estimator uses a performance index where the minimum difference between the plasma frequencies and electron neutral momentum collision frequencies is determined for the two signal interrogation frequencies under the constraint of the same plasma thickness. The estimator was developed in three stages which include iterative, sequential, and adaptive. The setups of the iterative, sequential, and adaptive approaches are discussed. The impact of the interrogation frequency and the estimator setup is investigated. The estimator in the three development stages is compared with known cases and the plasma parameter estimator performance is quantified.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Cybersecurity Enhancement for Multi-Infeed High-Voltage DC Systems

Composed of multiple two-terminal high-voltage DC (HVDC) transmission systems, a multi-infeed HVDC (MIDC) system exchanges massive power among multiple asynchronous AC systems. However, as an intrinsically cyber-physical system, an MIDC system could suffer from cyber-attacks, leading to massive power mismatches in multiple AC systems, and resulting in catastrophic consequences. Since the sequential responses of an MIDC system and interconnected AC systems are in different timescales, this paper first establishes a two-timescale model to evaluate the sequential impacts caused by cyber-attacks. Then, an event-triggered cyber-defense strategy is proposed to enhance the cybersecurity of an MIDC system by mitigating multiple non-simultaneous cyber-attacks. Whenever new cyber-attack events occur, the proposed cyber-defense strategy, which is mathematically modeled as a mixed-integer quadratic programming problem, is executed on-line and updated in an event-triggered manner. Here, simulation results on an MIDC system demonstrate that the low-cost and almost blind cyber-attacks can cause severe frequency deviations, and the proposed strategy can mitigate multi-cyber-attacks effectively.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Utilization of formic acid by extremely thermoacidophilic archaea species

The exploration of novel hosts with the ability to assimilate formic acid, a C1 substrate that can be produced from renewable electrons and CO 2 , is of great relevance for developing novel and sustainable biomanufacturing platforms. Formatotrophs can use formic acid or formate as a carbon and/or reducing power source. Formatotrophy has typically been studied in neutrophilic microorganisms because formic acid toxicity increases in acidic environments below the pKa of 3.75 (25°C). Because of this toxicity challenge, utilization of formic acid as either a carbon or energy source has been largely unexplored in thermoacidophiles, species that possess the ability to produce a variety of metabolites and enzymes of high biotechnological relevance. Here we investigate the capacity of several thermoacidophilic archaea species from the Sulfolobales order to tolerate and metabolize formic acid. Metallosphaera prunae, Sulfolobus metallicus and Sulfolobus acidocaldarium were found to metabolize and grow with 1–2 mM of formic acid in batch cultivations. Formic acid was co-utilized by this species alongside physiological electron donors, including ferrous iron. To enhance formic acid utilization while maintaining aqueous concentrations below the toxicity threshold, we developed a bioreactor culturing method based on a sequential formic acid feeding strategy. By dosing small amounts of formic acid sequentially and feeding H 2 as co-substrate, M. prunae could utilize a total of 16.3 mM of formic acid and grow to higher cell densities than when H 2 was supplied as a sole electron donor. These results demonstrate the viability of culturing thermoacidophilic species with formic acid as an auxiliary substrate in bioreactors to obtain higher cell densities than those yielded by conventional autotrophic conditions. Our work underscores the significance of formic acid metabolism in extreme habitats and holds promise for biotechnological applications in the realm of sustainable energy production and environmental remediation.

59 BASIC BIOLOGICAL SCIENCES↗

Particle size influences decay rates of environmental DNA in aquatic systems

Abstract Environmental DNA (eDNA) analysis is a powerful tool for remote detection of target organisms. However, obtaining quantitative and longitudinal information from eDNA data is challenging, requiring a deep understanding of eDNA ecology. Notably, if the various size components of eDNA decay at different rates, and we can separate them within a sample, their changing proportions could be used to obtain longitudinal dynamics information on targets. To test this possibility, we conducted an aquatic mesocosm experiment in which we separated fish‐derived eDNA components using sequential filtration to evaluate the decay rate and changing proportion of various eDNA particle sizes over time. We then fit four alternative mathematical decay models to the data, building towards a predictive framework to interpret eDNA data from various particle sizes. We found that medium‐sized particles (1–10 μm) decayed more slowly than other size classes (i.e., <1 and > 10 μm), and thus made up an increasing proportion of eDNA particles over time. We also observed distinct eDNA particle size distribution (PSD) between our Common carp and Rainbow trout samples, suggesting that target‐specific assays are required to determine starting eDNA PSDs. Additionally, we found evidence that different sizes of eDNA particles do not decay independently, with particle size conversion replenishing smaller particles over time. Nonetheless, a parsimonious mathematical model where particle sizes decay independently best explained the data. Given these results, we suggest a framework to discern target distance and abundance with eDNA data by applying sequential filtration, which theoretically has both metabarcoding and single‐target applications.

Brandão‐Dias, Pedro F. P.↗

Role of reinforcement learning for risk-based robust control of cyber-physical energy systems

Critical infrastructures such as cyber-physical energy systems (CPS-E) integrate information flow and physical operations that are vulnerable to natural and targeted failures. Safe, secure, and reliable operation and control of CPS-E is critical to ensure societal well-being and economic prosperity. Automated control is key for real-time operations and may be mathematically cast as a sequential decision-making problem under uncertainty. Emergence of data-driven techniques for decision making under uncertainty, such as reinforcement learning (RL), have led to promising advances for addressing sequential decision-making problems for risk-based robust CPS-E control. However, existing research challenges include understanding the applicability of RL methods across diverse CPS-E applications, addressing the effect of risk preferences across multiple RL methods, and development of open-source domain-aware simulation environments for RL experimentation within a CPS-E context. This article systematically analyzes the applicability of four types of RL methods (model-free, model-based, hybrid model-free and model-based, and hierarchical) for risk-based robust CPS-E control. Problem features and solution stability for the RL methods are also discussed. We demonstrate and compare the performance of multiple RL methods under different risk specifications (risk-averse, risk-neutral, and risk-seeking) through the development and application of an open-source simulation environment. Motivating numerical simulation examples include representative single-zone and multizone building control use cases. Finally, six key insights for future research and broader adoption of RL methods are identified, with specific emphasis on problem features, algorithmic explainability, and solution stability.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Inverse Aerodynamic Design of Gas Turbine Blades using Probabilistic Machine Learning

Abstract One of the critical components in Industrial Gas Turbines (IGT) is the turbine blade. Design of turbine blades needs to consider multiple aspects like aerodynamic efficiency, durability, safety and manufacturing, which make the design process sequential and iterative. The sequential nature of these iterations forces a long design cycle time, ranging from several months to years. Due to the reactionary nature of these iterations, little effort has been made to accumulate data in a manner that allows for deep exploration and understanding of the total design space. This is exemplified in the process of designing the individual components of the IGT resulting in a potential unrealized efficiency. To overcome the aforementioned challenges, we demonstrate a probabilistic inverse design machine learning framework, namely PMI (PMI), to carry out an explicit inverse design. PMI calculates the design explicitly without costly iteration and overcomes the challenges associated with ill-posed inverse problems. In this work the framework will be demonstrated on inverse aerodynamic design of three-dimensional turbine blades.

Engineering↗

Co-Optimization of Velocity and Charge-Depletion for Plug-In Hybrid Electric Vehicles: Accounting for Acceleration and Jerk Constraints

Abstract Recent advances in vehicle connectivity and automation technologies promote advanced control algorithms that co-optimize the longitudinal dynamics and powertrain operation of hybrid electric vehicles. Typically, a sequential optimization with the vehicle dynamics optimized followed by powertrain optimization is adopted to manage a number of complexities such as the inherent mixed-integer nature of the hybrid powertrain, the numerous state and control variables, the differing time scales of vehicle and powertrain subsystems, time-varying state constraints, and large horizon lengths. Instead, we solve the offline optimization problem in a centralize manner assuming exact knowledge of the lead vehicle's position over the entire trip by applying a discrete-time single shooting-based numerical approach, Discrete Mixed-Integer Shooting (DMIS), including a linearly increasing computational complexity to the problem horizon. In particular, the hierarchical problem structure is exploited to decompose the computationally intensive Hamiltonian minimization step into a set of low-dimensional optimizations. DMIS allows us to compute the direct fuel minimization problem including the vehicle and powertrain dynamics in a centralized manner to its full horizon while systematically tuning weighting factors that penalize passenger discomfort. For the first time, this study reveals that practically implemented sequential optimization exhibits similar fuel optimality as co-optimization when a certain level of passenger comfort is required.

Automation & Control Systems↗

Raytracing the long trace profiler

The optical design of the Long Trace Profiler optical system is explored with a commercial raytrace program, Zemax OpticStudio™ (ZOS)1, with the intent of finding and correcting sources of systematic error. ZOS provides both geometric raytracing tools and physical optics Gaussian beam propagation and diffraction image calculation tools, and two design modes, sequential component (SC) and non-sequential component (NSC) that are optimized for different aspects of the design process. The original LTP-II system employs a singlet lens with a 1250 mm focal length. It is optimized to provide minimum distortion over a surface slope angle range of ±5 mrad. Using the ZOS tools, we are able to simulate ghost rays that produce distortion in the beam spot image and can minimize the distortion by deliberate misalignment of the beamsplitter (BS) components. Unfortunately, the reference beam is compromised because of the component tilts. The most recent LTP500 system design simplifies the optical system and makes the reference beam usable again, even with misalignment of the polarizing beamsplitter (PBS). Two lenses are designed for the LTP500 - a cemented doublet that has been fabricated, and a singlet with one aspheric surface. Both have focal distances of 500 mm with an expanded angular measurement range of ±10 mrad. The aspheric singlet provides superior performance. ZOS allows the import of wavefront measurement data produced by commercial interferometer software. We apply the wavefront error measurement from the cemented doublet to the model to show that the 19nm RMS wavefront error needs to be improved by at least a factor of ten in order to reduce the systematic error to a level that will allow the LTP to approach its design limit of a few tens of nanoradians.

Takacs, Peter Z.↗

New insights on carbon black suspension rheology—Anisotropic thixotropy and antithixotropy

We report a detailed experimental study of peculiar thixotropic dynamics of carbon black (CB, Vulcan XC-72) suspensions in mineral oil, specifically the observation of sequential stress increase then decrease at a fixed shear rate in a step-down test. We verify that such dynamics, though peculiar, come from a true material response rather than experimental artifacts. We also reveal how this long-time stress decay is associated with antithixotropic structural change rather than viscoelastic stress relaxation by using orthogonal superposition (OSP) rheometry to probe viscoelastic moduli during the step-down tests. The orthogonal storage and loss moduli are present, showing this two-timescale recovery then decay response, which demonstrates that this response is antithixotropic, and it involves shear-induced structuring. We further show a mechanical anisotropy in the CB suspension under shear using OSP. Based on the rheological results, a microstructural schematic is proposed, considering qualitatively thixotropic structure build-up, antithixotropic densification, and anisotropic structure evolution. Our observation for these CB suspensions is outside the standard paradigm of thixotropic structure-parameter models, and the elastic response provides us with new insight into the transient dynamics of CB suspensions.

Mechanics↗

Power Converter Circuit Design Automation using Parallel Monte Carlo Tree Search

The tidal waves of modern electronic/electrical devices have led to increasing demands for ubiquitous application-specific power converters. A conventional manual design procedure of such power converters is computation- and labor-intensive, which involves selecting and connecting component devices, tuning component-wise parameters and control schemes, and iteratively evaluating and optimizing the design. To automate and speed up this design process, we propose an automatic framework that designs custom power converters from design specifications using Monte Carlo Tree Search. Specifically, the framework embraces the upper-confidence-bound-tree (UCT), a variant of Monte Carlo Tree Search, to automate topology space exploration with circuit design specification-encoded reward signals. Moreover, our UCT-based approach can exploit small offline data via the specially designed default policy and can run in parallel to accelerate topology space exploration. Further, it utilizes a hybrid circuit evaluation strategy to substantially reduce design evaluation costs. Empirically, we demonstrated that our framework could generate energy-efficient circuit topologies for various target voltage conversion ratios. Compared to existing automatic topology optimization strategies, the proposed method is much more computationally efficient --- the sequential version can generate topologies with the same quality while being up to 67% faster. Here, the parallelization schemes can further achieve high speedups compared to the sequential version.

24 POWER TRANSMISSION AND DISTRIBUTION↗