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At least 379 records · Page 21

Predictive Risk Mapping of Schistosomiasis in Madagascar Using Ecological Niche Modeling and Precision Mapping

Schistosomiasis is a neglected tropical disease (NTD) found throughout tropical and subtropical Africa. In Madagascar, the condition is widespread and endemic in 74% of all administrative districts in the country. Despite the significant burden of the disease, high-resolution risk maps have yet to be produced to guide national control programs. This study used an ecological niche modeling (ENM) and precision mapping approach to estimate environmental suitability and disease transmission risk. The results show that suitability for schistosomiasis is widespread and covers 264,781 km 2 (102,232 sq miles). Covariates of significance to the model were the accessibility to cities, distance to water, enhanced vegetation index (EVI), annual mean temperature, land surface temperature (LST), clay content, and annual precipitation. Disease transmission risk is greatest in the central highlands, tropical east coast, arid-southwest, and northwest. An estimated 14.9 million people could be at risk of schistosomiasis; 11.4 million reside in rural areas, while 3.5 million are in urban areas. This study provides valuable insight into the geography of schistosomiasis in Madagascar and its potential risk to human populations. Because of the focal nature of the disease, these maps can inform national surveillance programs while improving understanding of areas in need of medical interventions.

60 APPLIED LIFE SCIENCES↗

Utility of imaging spectrometry for lithologic mapping in Greenland

Landsat Thematic Mapper (TM) multispectral image data and field-based spectral reflectance measurements for a portion of the island of Storo, southwestern Greenland, were used to evaluate the potential of imaging spectrometry for lithologic mapping in arctic terrains. TM data allow mapping of tundra vegetation that typically covers moraines at lower elevations, and lichen-covered bedrock exposed at higher elevations. However, the ubiquitous lichen cover, combined with the limited spectral and radiometric capabilities of TM, severely hamper mapping of the amphibolite, anorthosite, gneiss, and granite outcrops on the island. Diagnostic mineral signatures can be discerned from high spectral and radiometric resolution observations, because lichen cover is patchy at mineral and outcrop scales. Results imply that high resolution imaging spectrometer data (e.g., from the HIRIS sensor to fly on the Earth Observing System), detailed field work, and application of subpixel mixing models will dramatically improve the ability to identify and map bedrock in similar terrains.

Rivard, Benoit↗

A Modeling Approach to Global Land Surface Monitoring with Low Resolution Satellite Imaging

The effects of changing land use/land cover on global climate and ecosystems due to greenhouse gas emissions and changing energy and nutrient exchange rates are being addressed by federal programs such as NASA's Mission to Planet Earth (MTPE) and by international efforts such as the International Geosphere-Biosphere Program (IGBP). The quantification of these effects depends on accurate estimates of the global extent of critical land cover types such as fire scars in tropical savannas and ponds in Arctic tundra. To address the requirement for accurate areal estimates, methods for producing regional to global maps with satellite imagery are being developed. The only practical way to produce maps over large regions of the globe is with data of coarse spatial resolution, such as Advanced Very High Resolution Radiometer (AVHRR) weather satellite imagery at 1.1 km resolution or European Remote-Sensing Satellite (ERS) radar imagery at 100 m resolution. The accuracy of pixel counts as areal estimates is in doubt, especially for highly fragmented cover types such as fire scars and ponds. Efforts to improve areal estimates from coarse resolution maps have involved regression of apparent area from coarse data versus that from fine resolution in sample areas, but it has proven difficult to acquire sufficient fine scale data to develop the regression. A method for computing accurate estimates from coarse resolution maps using little or no fine data is therefore needed.

Hlavka, Christine A.↗

Benefits of a 4th Ice Class in the Simulated Radar Reflectivities of Convective Systems Using a Bulk Microphysics Scheme

Numerous cloud microphysical schemes designed for cloud and mesoscale models are currently in use, ranging from simple bulk to multi-moment, multi-class to explicit bin schemes. This study details the benefits of adding a 4th ice class (hail) to an already improved 3-class ice bulk microphysics scheme developed for the Goddard Cumulus Ensemble model based on Rutledge and Hobbs (1983,1984). Besides the addition and modification of several hail processes from Lin et al. (1983), further modifications were made to the 3-ice processes, including allowing greater ice super saturation and mitigating spurious evaporationsublimation in the saturation adjustment scheme, allowing graupelhail to become snow via vapor growth and hail to become graupel via riming, and the inclusion of a rain evaporation correction and vapor diffusivity factor. The improved 3-ice snowgraupel size-mapping schemes were adjusted to be more stable at higher mixing rations and to increase the aggregation effect for snow. A snow density mapping was also added. The new scheme was applied to an intense continental squall line and a weaker, loosely-organized continental case using three different hail intercepts. Peak simulated reflectivities agree well with radar for both the intense and weaker case and were better than earlier 3-ice versions when using a moderate and large intercept for hail, respectively. Simulated reflectivity distributions versus height were also improved versus radar in both cases compared to earlier 3-ice versions. The bin-based rain evaporation correction affected the squall line case more but did not change the overall agreement in reflectivity distributions.

bulk microphysics schemes↗

Inversion of downhole electrical measurements for proppant mapping using very fast simulated annealing

Proppant mapping is critical for optimizing fracture treatment design and improving wells’ productivity. An electrode-based resistivity tool concept was developed earlier for proppant mapping in cased-hole wells. An array of insulating gaps is installed and cemented in place as a permanent part of the casing string. The electrical measurements are performed by imposing a voltage across each insulating gap, one at a time, before and after hydraulic fracture operations. The voltages across other insulating gaps near the transmitter gap are recorded. The method relies on direct excitation of the casing, which is expected to overcome the severe limitations of induction tools in cased-hole wells. A forward model based on a finite volume method has been developed to simulate the tool’s response to one or multiple fractures. To enable the implementation of such a practical system in multistage fractured horizontal wells, a fast and robust inversion approach is required. To that end, we have developed a divide-and-conquer approach based on a global optimization algorithm very fast simulated annealing (VFSA). Specifically, the original inverse problem is divided into subproblems and each subproblem can be solved separately using VFSA. The results indicate that our approach can invert the data and output widths and radii of multiple fractures without requiring a large number of forward simulations. The robustness of the inverse solver is also tested by adding Gaussian noise to the synthetic data. We tested example cases that demonstrate that when up to 5% noise is introduced, VFSA still provides very accurate inversion results with moderate uncertainties. Inversion results with some more realistic conditions, e.g., tilted fractures, complex fractures, and so on, are also presented.

Geochemistry & Geophysics↗

Mesh generation by conformal and quasiconformal mappings

It is pointed out that many recent advances in the finite-difference solution of elliptic equations have been limited to regions whose boundary contours coincide with coordinate lines of the Cartesian coordinate system. The reason for this is related to the fact that in the case of an arbitrary curvilinear coordinate system the original equation becomes much more complex. However, there is no added complexity if an orthogonal coordinate system is generated from a conformal mapping. In the present investigation, a finite difference method developed for the construction of conformal mappings has been generalized to construct quasi-conformal mappings. It is expected that the use of more sophisticated numerical algorithms could lead to improvements in both speed and accuracy. Quasi-conformal mappings have applications not only in the solution of elliptic equations but also in other areas such as orthogonal mesh generation on surfaces and the solution of certain fluid flow problems.

Mastin, C. W.↗

Evaluation of Integrating the Invasive Species Forecasting System to Support National Park Service Decisions on Fire Management Activities and Invasive Plant Species Control

The USGS and NASA, in conjunction with Colorado State University, George Mason University and other partners, have developed the Invasive Species Forecasting System (ISFS), a flexible tool that capitalizes on NASA's remote sensing resource to produce dynamic habitat maps of invasive terrestrial plant species across the United States. In 2006 ISFS was adopted to generate predictive invasive habitat maps to benefit noxious plant and fire management teams in three major National Park systems: The Greater Yellowstone Area (Yellowstone / Grand Tetons National Parks), Sequoia and Kings Canyon National Park, and interior Alaskan (between Denali, Gates of The Arctic and Yukon-Charley). One of the objectives of this study is to explore how the ISFS enhances decision support apparatus in use by National Park management teams. The first step with each park system was to work closely with park managers to select top-priority invasive species. Specific species were chosen for each study area based on management priorities, availability of observational data, and their potential for invasion after fire disturbances. Once focal species were selected, sources of presence/absence data were collected from previous surveys for each species in and around the Parks. Using logistic regression to couple presence/absence points with environmental data layers, the first round of ISFS habitat suitability maps were generated for each National Park system and presented during park visits over the summer of 2006. This first engagement provided a demonstration of what the park service can expect from ISFS and initiated the ongoing dialog on how the parks can best utilized the system to enhance their decisions related to invasive species control. During the park visits it was discovered that separate "expert opinion" maps would provide a valuable baseline to compare against the ISFS model output. Opinion maps are a means of spatially representing qualitative knowledge into a quantitative two-dimensional map. Furthermore, our approach combines the qualitative expert opinion habitat maps -- with the quantitative ISFS habitat maps in a difference map that shows where the two maps agree and disagree. The objective of the difference map is to help focus future field sampling and improve model results. This paper presents a demonstration of the habitat, expert opinion, and difference map for Yellowstone National Park.

Ma, Peter↗

Application of Remote Sensing to Planimetric, Thematic, and Topographic Mapping

Results of studies indicate some of the potential applications of space photography to mapping. The imagery used was not optimum for mapping purposes, and there is considerable room for improvement. The ERTS A and B satellites are expected to provide imagery that will be useful for small scale mapping, both planimetric and thematic. The repetitive coverage capability will certainly be useful for monitoring changing phenomena. However, to solve the world mapping problems, other imaging systems will have to be flown. Film-return satellites and geosynchronous satellites may have to be used together with aircraft to provide imagery for rapid and efficient mapping operations. Until such systems are in use on a worldwide basis, there is little likelihood that the planimetric and topographic map needs, particularly of the developing countries, will be met.

Mclaurin, J. D.↗

Arctic Sea Ice Motion from Wavelet Analysis of Satellite Data

Wavelet analysis of DMSP SSM/I (Special Sensor Microwave/Imager) 85 GHz and 37 GHz radiance data, SMMR (Scanning Multichannel Microwave Radiometer) 37 GHz, and NSCAT (NASA Scatterometer) 13.9 GHZ data can be used to obtain daily sea ice drift information for both the northern and southern polar regions. The derived maps of sea ice drift provide both improved spatial coverage over the existing array of Arctic Ocean buoys and better temporal resolution over techniques utilizing data from satellite synthetic aperture radars (SAR). Examples of derived ice-drift maps in the Arctic illustrate large-scale circulation reversals within a period of a couple weeks. Comparisons with ice displacements derived from buoys show good quantitative agreement. NASA Scatterometer (NSCAT) 13.9 GHZ data have been also used for wavelet analysis to derive sea-ice drift. First, the 40' incidence-angle, sigma-zero (surface roughness) daily map of whole Arctic region with 25 km of pixel size from satellite's 600 km swath has been constructed. Then, the similar wavelet transform procedure to SSM/I data can be applied. Various scales of wavelet transform and threshold have been tested. By overlaying , neighbor filtering, and block-averaging the results of multiscale wavelet transforms, the final sea ice drift vectors are much smooth and representative to the sea ice motion. This wavelet analysis procedure is robust and can make a major contribution to the understanding of ice motion over large areas at relatively high temporal resolutions. The results of wavelet analysis of SSM/I and NSCAT images and buoy data can be merged by some data fusion techniques and will help to improve our current knowledge of sea ice drift and related processes through the data assimilation of ocean-ice numerical model.

Liu, Antony K.↗

Least Squares Reverse Time Migration (LSRTM) for Damage Imaging in Composite Laminates

A method for adapting least squares reverse time migration (LSRTM) for ultrasonic guided wave imaging of composite laminates is proposed in this paper. As composites become more widely used in fields such as the aerospace industry, the need for high-resolution imaging in structural health monitoring (SHM) and nondestructive evaluation (NDE) is also growing. For instance, delamination is a common problem in composite laminates, which has led to a certain degree of apprehension in the use of composite materials for load-bearing structures. Although the solver-based imaging techniques using conventional reverse time migration (RTM) methods illuminate damage with a wide range of damage-scattering effects, the resulting images do not fully define the damage regions due to the limited data acquisition aperture, sensor density, frequencies/wavelengths, and incompleteness of adjoint reconstruction. Previously, the LSRTM theory was derived by incorporating a least squares migration (LSM) algorithm into RTM, and benchmarked its high-resolution damage imaging performance for isotropic plates. To improve damage imaging in composite laminates, a process to create an ultrasonic guided wave-based LSRTM method for anisotropic materials is proposed in this paper. The derivation of the forward modeling operator and the adjoint operator is presented. Numerical case studies were conducted to show the improvement of LSRTM over RTM in mapping damage in composite plates. Multiple damage sites or damage with a complex shape were created in the numerical studies based on 1) Born approximation-based modeling or 2) reduction of the plate stiffness-based modeling. LSRTM begins by using a forward modeling process. The forward modeling accuracy for the flexural wave solver used in this study for LSRTM was also compared with the results from a three-dimensional rotated staggered grid (RSG) elastodynamic finite difference solver, previously open-sourced by NASA Langley Research Center. These benchmarking studies have shown that the LSRTM method is more effective in reducing artifacts, improving resolution, and enhancing damage model reconstruction compared to RTM in composite laminates.

Jiaze He↗

Comparison of MSS and TM Data for Landcover Classification in the Chesapeake Bay Area: a Preliminary Report

An area bordering the Eastern Shore of the Chesapeake Bay was selected for study and classified using unsupervised techniques applied to LANDSAT-2 MSS data and several band combinations of LANDSAT-4 TM data. The accuracies of these Level I land cover classifications were verified using the Taylor's Island USGS 7.5 minute topographic map which was photointerpreted, digitized and rasterized. The the Taylor's Island map, comparing the MSS and TM three band (2 3 4) classifications, the increased resolution of TM produced a small improvement in overall accuracy of 1% correct due primarily to a small improvement, and 1% and 3%, in areas such as water and woodland. This was expected as the MSS data typically produce high accuracies for categories which cover large contiguous areas. However, in the categories covering smaller areas within the map there was generally an improvement of at least 10%. Classification of the important residential category improved 12%, and wetlands were mapped with 11% greater accuracy.

Mulligan, P. J.↗

Interferometric SAR modelling of near surface data to improve geological model in the Surat Basin, Australia

Here we present a study on geophysical inverse modelling for subsurface structural properties of an unconventional hydrocarbon site that was monitored previously by Interferometric Synthetic Aperture Radar (InSAR) technology for surface deformation. A static three-dimensional geomodel along with extracted property maps replicates the depth of each underlying stratigraphic unit and structural feature with the density of each geological layer. We examine the hypothesis that integration of elastic properties of each formation layer with InSAR observations in a stratified elastic medium will lead to a viscoelastic geophysical inverse problem that can be solved to estimate fractional volume change at the reservoir level. Moreover, we examine synthetic scenarios in which the elastic properties of the formations are perturbed before determining the resulting impact on the rate of surface deformation. The results show that although the slope of underlying formations, their density and depth can define the extent and pattern of a deformation signal, their properties have a marginal impact on volumetric change compared to the dense network of shallow depth Coal Seam Gas (CSG) mining wells. Besides, it is also demonstrated that the inversion of InSAR deformation maps can resolve the uncertainties associated with low-resolution seismic interpretation as well as filling the data gaps within seismic acquisitions. A significant contribution of this investigation to the geological basin modelling involves a) introducing a remote and non-invasive technology such as InSAR to improve geophysical mapping of subsurface structures such as faults in areas with sparse or no reflective seismic information, and b) applying a multi-layer viscoelastic geophysical source model for an unconventional hydrocarbon reservoir such as CSG.

58 GEOSCIENCES↗

Geostationary Lightning Mapper for GOES-R

The Geostationary Lightning Mapper (GLM) is a single channel, near-IR optical detector, used to detect, locate and measure total lightning activity over the full-disk as part of a 3-axis stabilized, geostationary weather satellite system. The next generation NOAA Geostationary Operational Environmental Satellite (GOES-R) series with a planned launch in 2014 will carry a GLM that will provide continuous day and night observations of lightning from the west coast of Africa (GOES-E) to New Zealand (GOES-W) when the constellation is fully operational. The mission objectives for the GLM are to 1) provide continuous, full-disk lightning measurements for storm warning and Nowcasting, 2) provide early warning of tornadic activity, and 3) accumulate a long-term database to track decadal changes of lightning. The GLM owes its heritage to the NASA Lightning Imaging Sensor (1997-Present) and the Optical Transient Detector (1995-2000), which were developed for the Earth Observing System and have produced a combined 11 year data record of global lightning activity. Instrument formulation studies begun in January 2006 will be completed in March 2007, with implementation expected to begin in September 2007. Proxy total lightning data from the NASA Lightning Imaging Sensor on the Tropical Rainfall Measuring Mission (TRMM) satellite, airborne science missions (e.g., African Monsoon Multi-disciplinary Analysis, AMMA), and regional test beds (e.g, Lightning Mapping Arrays) are being used to develop the pre-launch algorithms and applications, and also improve our knowledge of thunderstorm initiation and evolution. Real time lightning mapping data now being provided to selected forecast offices will lead to improved understanding of the application of these data in the severe storm warning process and accelerate the development of the pre-launch algorithms and Nowcasting applications. Proxy data combined with MODIS and Meteosat Second Generation SEVERI observations will also lead to new applications (e.g., multi-sensor precipitation algorithms blending the GLM with the Advanced Baseline Imager, convective cloud initiation and identification, early warnings of lightning threat, storm tracking, and data assimilation).

Goodman, Steven↗

Pressure-Driven Helium Insertion for Structural Stability of CH 3 NH 3 PbBr 3 Hybrid Perovskites

Organic−inorganic metal halide perovskites (MHPs) have garnered significant attention due to their outstanding performance in optoelectronic devices, but they are prone to degradation through a variety of pathways. High-pressure studies are being used to understand the mechanical and structural stability of MHPs and investigate new methods for improving these. In this study, we map the high-pressure, low-temperature structural phase diagram of CH 3 NH 3 PbBr 3 (MAPbBr 3 ) between 15−300 K and up to 1.5 GPa. We first compare the temperature and pressure effects on the global and local structures of MAPbBr 3 using synchrotron X-ray diffraction (XRD) and extended X-ray absorption fine structure (EXAFS), respectively, and find evidence of PbBr 6 octahedral distortion. Our results also suggest that He inserts into the MAPbBr 3 structure. The thermodynamics of He insertion into MAPBHe x are calculated to be plausible at room temperature for x ≤ 1 and P = 1−3 GPa and shown to stabilize higher-symmetry phases. This phenomenon increases the fitted bulk modulus of MAPbBr 3 . Structural stabilization by inert atom insertion is proposed as a method to improve the mechanical robustness of MHPs and other soft hybrid materials.

Diffraction↗

Integration of high-density genetic mapping with transcriptome analysis uncovers numerous agronomic QTL and reveals candidate genes for the control of tillering in sorghum

Phenotypes such as branching, photoperiod sensitivity, and height were modified during plant domestication and crop improvement. Here, we perform quantitative trait locus (QTL) mapping of these and other agronomic traits in a recombinant inbred line (RIL) population derived from an interspecific cross between Sorghum propinquum and Sorghum bicolor inbred Tx7000. Using low-coverage Illumina sequencing and a bin-mapping approach, we generated ~1920 bin markers spanning ~875 cM. Phenotyping data were collected and analyzed from two field locations and one greenhouse experiment for six agronomic traits, thereby identifying a total of 30 QTL. Many of these QTL were penetrant across environments and co-mapped with major QTL identified in other studies. Other QTL uncovered new genomic regions associated with these traits, and some of these were environment-specific in their action. To further dissect the genetic underpinnings of tillering, we complemented QTL analysis with transcriptomics, identifying 6189 genes that were differentially expressed during tiller bud elongation. We identified genes such as Dormancy Associated Protein 1 (DRM1) in addition to various transcription factors that are differentially expressed in comparisons of dormant to elongating tiller buds and lie within tillering QTL, suggesting that these genes are key regulators of tiller elongation in sorghum. Our study demonstrates the usefulness of this RIL population in detecting domestication and improvement-associated genes in sorghum, thus providing a valuable resource for genetic investigation and improvement to the sorghum community.

59 BASIC BIOLOGICAL SCIENCES↗

Nominal 30-M Cropland Extent Map of Continental Africa by Integrating Pixel-Based and Object-Based Algorithms Using Sentinel-2 and Landsat-8 Data on Google Earth Engine

A satellite-derived cropland extent map at high spatial resolution (30-m or better) is a must for food and water security analysis. Precise and accurate global cropland extent maps, indicating cropland and non-cropland areas, is a starting point to develop high-level products such as crop watering methods (irrigated or rainfed), cropping intensities (e.g., single, double, or continuous cropping), crop types, cropland fallows, as well as assessment of cropland productivity (productivity per unit of land), and crop water productivity (productivity per unit of water). Uncertainties associated with the cropland extent map have cascading effects on all higher-level cropland products. However, precise and accurate cropland extent maps at high spatial resolution over large areas (e.g., continents or the globe) are challenging to produce due to the small-holder dominant agricultural systems like those found in most of Africa and Asia. Cloud-based Geospatial computing platforms and multi-date, multi-sensor satellite image inventories on Google Earth Engine offer opportunities for mapping croplands with precision and accuracy over large areas that satisfy the requirements of broad range of applications. Such maps are expected to provide highly significant improvements compared to existing products, which tend to be coarser in resolution, and often fail to capture fragmented small-holder farms especially in regions with high dynamic change within and across years. To overcome these limitations, in this research we present an approach for cropland extent mapping at high spatial resolution (30-m or better) using the 10-day, 10 to 20-m, Sentinel-2 data in combination with 16-day, 30-m, Landsat-8 data on Google Earth Engine (GEE). First, nominal 30-m resolution satellite imagery composites were created from 36,924 scenes of Sentinel-2 and Landsat-8 images for the entire African continent in 2015-2016. These composites were generated using a median-mosaic of five bands (blue, green, red, near-infrared, NDVI) during each of the two periods (period 1: January-June 2016 and period 2: July-December 2015) plus a 30-m slope layer derived from the Shuttle Radar Topographic Mission (SRTM) elevation dataset. Second, we selected Cropland/Non-cropland training samples (sample size 9791) from various sources in GEE to create pixel-based classifications. As supervised classification algorithm, Random Forest (RF) was used as the primary classifier because of its efficiency, and when over-fitting issues of RF happened due to the noise of input training data, Support Vector Machine (SVM) was applied to compensate for such defects in specific areas. Third, the Recursive Hierarchical Segmentation (RHSeg) algorithm was employed to generate an object-oriented segmentation layer based on spectral and spatial properties from the same input data. This layer was merged with the pixel-based classification to improve segmentation accuracy. Accuracies of the merged 30-m crop extent product were computed using an error matrix approach in which 1754 independent validation samples were used. In addition, a comparison was performed with other available cropland maps as well as with LULC maps to show spatial similarity. Finally, the cropland area results derived from the map were compared with UN FAO statistics. The independent accuracy assessment showed a weighted overall accuracy of 94, with a producers accuracy of 85.9 (or omission error of 14.1), and users accuracy of 68.5 (commission error of 31.5) for the cropland class. The total net cropland area (TNCA) of Africa was estimated as 313 Mha for the nominal year 2015.

Cropland mapping; cropland areas; 30-m; Landsat-8;↗

An improved supersonic, three-dimensional, external, inviscid flow field code

A numerical procedure was developed to compute the inviscid super/hypersonic flow fields about complex vehicle geometries accurately and efficiently. A second-order accurate finite difference scheme is used to integrate the three-dimensional Euler equations in regions of continuous flow, while all shock waves are computed as discontinuities via the Rankine-Hugoniot jump conditions. Conformal mappings are used to develop a computational grid. The effects for equilibrium air are included using curve fits of Mollier charts. This report deals only with modifications to these procedures in four specific areas: inlet mass ingestion, subsonic axial Mach number, improved conformal mappings, and vehicles flying at yaw. In each area both the modifications to the computational procedures and computer code are discussed.

Marconi, F.↗