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There are a number of factors that can cause mortality in plants during and after a fire. All these factors will affect the growth tissues and/or seed germination. The response of plants will vary according to the phenology of the plant in question.
Environmental monitoring data are collected at and around the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) at the Nevada National Security Site (NNSS). These data are associated with radiation exposure, air, groundwater, meteorology, and vadose zone. This report summarizes the 2012 environmental data to provide an overall evaluation of RWMS performance and to support environmental compliance and performance assessment (PA) activities. Some of these data (e.g., radiation exposure, air, and groundwater) are presented in other reports (National Security Technologies, LLC, 2012; 2013a; 2013b). Direct radiation monitoring data indicate exposure levels at the RWMSs are within the range of background levels measured at the NNSS. Slightly elevated exposure levels outside the Area 3 RWMS are attributed to nearby historical aboveground nuclear weapons tests. Air monitoring data show tritium concentrations in water vapor and americium and plutonium concentrations in air particles are only slightly above detection limits and background levels. The measured levels of radionuclides in air particulates and moisture are below Derived Concentration Standards for these radionuclides. Groundwater monitoring data indicate the groundwater in the uppermost aquifer beneath the Area 5 RWMS is not impacted by RWMS operations. Results of groundwater analysis from wells around the Area 5 RWMS were all below established investigation levels. Leachate samples collected from the leachate collection system at the mixed low-level waste cell were below established contaminant regulatory limits. The 133.9 millimeters (mm) (5.27 inches [in.]) of precipitation at the Area 3 RWMS during 2012 is 12% below the average of 153.0 mm (6.02 in.), and the 137.6 mm (5.42 in.) of precipitation at the Area 5 RWMS during 2012 is 11% below the average of 122.4 mm (4.82 in.). Water balance measurements indicate that evapotranspiration from the vegetated weighing lysimeter dries the soil and prevents downward percolation of precipitation more effectively than evaporation from the bare-soil weighing lysimeter. Automated vadose zone monitoring on Area 5 and Area 3 RWMS cell covers show no evidence of precipitation percolating through the cover to the waste. Moisture from precipitation did not percolate below 60 centimeters (cm) (2 feet [ft]) in the vegetated final cover on the U-3ax/bl disposal unit at the Area 3 RWMS, and moisture from precipitation and irrigation did not percolate below 45 cm (1.5 ft) on the 92-Acre Area final cover. Irrigation was applied to this cover for seed germination and plant growth. During 2012, there was no drainage through 2.4 meters (8 ft) of soil from the Area 3 drainage lysimeters that received only natural precipitation. Twenty percent of the applied precipitation and irrigation drained from the bare-soil drainage lysimeter that received 3 times natural precipitation. All 2012 monitoring data indicate that the Area 3 and Area 5 RWMSs are performing within expectations of the model and parameter assumptions for the facility PAs.
Environmental monitoring data are collected at and around the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) within the Nevada National Security Site (NNSS). These data are associated with radiation exposure, air, groundwater, meteorology, and vadose zone. This report summarizes the 2013 environmental data to provide an overall evaluation of RWMS performance and to support environmental compliance and performance assessment (PA) activities. Some of these data (e.g., radiation exposure, air, and groundwater) are presented in other reports (National Security Technologies, LLC, 2013; 2014a; 2014b). Direct radiation monitoring data indicate exposure levels at the RWMSs are within the range of background levels measured at the NNSS. Slightly elevated exposure levels outside the Area 3 RWMS are attributed to nearby historical aboveground nuclear weapons tests. Air monitoring data show tritium concentrations in water vapor and americium and plutonium concentrations in air particles are close to detection limits and background levels. The measured levels of radionuclides in air particulates and moisture are below Derived Concentration Standards for these radionuclides. Groundwater monitoring data indicate the groundwater in the uppermost aquifer beneath the Area 5 RWMS is not impacted by RWMS operations. Results of groundwater analysis from wells around the Area 5 RWMS were all below established investigation levels. Leachate samples collected from the leachate collection system at the mixed low-level waste cell were below established contaminant regulatory limits. The 105.8 millimeters (mm) (4.17 inches [in.]) of precipitation at the Area 3 RWMS during 2013 is 30% below the average of 150.3 mm (5.92 in.), and the 117.5 mm (4.63 in.) of precipitation at the Area 5 RWMS during 2013 is 5% below the average of 123.6 mm (4.86 in.). Water balance measurements indicate that evapotranspiration from the vegetated weighing lysimeter dries the soil and prevents downward percolation of precipitation more effectively than evaporation from the bare-soil weighing lysimeter. Automated vadose zone monitoring on Area 5 and Area 3 RWMS cell covers show no evidence of precipitation percolating through the cover to the waste. Moisture from precipitation did not percolate below 60 centimeters (cm) (2 feet [ft]) in the vegetated final cover on the U-3ax/bl disposal unit at the Area 3 RWMS, and moisture from precipitation and irrigation did not percolate below 45 cm (1.5 ft) on the 92-Acre Area final cover. Irrigation was applied to this cover for seed germination and plant growth. During 2013, there was no drainage through 2.4 meters (8 ft) of soil from the Area 3 drainage lysimeters that received only natural precipitation. Twenty percent of the applied precipitation and irrigation drained from the bare-soil drainage lysimeter that received 3-times natural precipitation. All 2013 monitoring data indicate that the Area 3 and Area 5 RWMSs are performing within expectations of the model and parameter assumptions for the facility PAs.
Pacific Northwest (PNW) prairies are an imperiled ecosystem that contain a large number of plant species with high fidelity to this habitat. The few remaining high-quality PNW prairies harbor a number of sensitive, rare, and endangered plant species that may be further at-risk with climate change. Thus, PNW prairies are an excellent model system to examine how climate change will affect the distribution of native plant species in grassland sites. Our experimental objectives were to determine: (i) how climate change will affect the range distribution of native plant species; (ii) what life history stages are most sensitive to climate change in a group of key indicator native species; (iii) the robustness of current restoration techniques and suites of species to changing climate, and in particular, the relative competitiveness of native species versus exotic invasive species; and (iv) the effects of climate change on carbon and nutrient cycling and soil-microbial-plant feedbacks. We addressed these objectives by experimentally increasing temperature 2.5 to 3.0 ºC above ambient with overhead infrared lamps and increasing wet-season precipitation by 20% above ambient in three upland prairie sites in central-western Washington, central-western Oregon, and southwestern Oregon from fall 2010 through 2012. Additional precipitation was applied within 2 weeks of when it fell so precipitation intensity was increased, particularly during the winter rainy season but with minimal additions during the summer dry season. These three sites also represent a 520-km natural climate gradient of increasing degree of severity of Mediterranean climate from north to south. After removing the extant vegetation, we planted a diverse suite of 12 native species that have their northern range limit someplace within the PNW in each experimental plot. An additional 20 more wide-spread native species were also planted into each plot. We found that recruitment of plant species within their ranges was negatively impacted by increased temperatures, but for species planted north of their current range, increased temperature was neutral. However, for surviving plants climate treatments and site-specific factors (e.g., nutrient availability) were the strongest predictors of plant growth and seed set. When recruitment and plant growth are considered together, increased temperatures are negative within a species current range but beyond this range they become positive. Germination was the most critical stage for plant response across all sites and climate treatments. Our results underscore the importance of including plant vital rates into models that are examining climate change effects on plant ranges. Warming altered plant community composition, decreased diversity, and increased total cover, with warmed northern communities over time becoming more like ambient communities further south. In particular, warming increased the cover of annual introduced species, suggesting that the observed biogeographic pattern of increasing invasion by this plant functional group in US West Coast prairies as one moves further south is at least in part due to climate. Our results suggest that with the projected increase in drought severity with climate change, Pacific Northwest prairies may face an increase of invasion by annuals, similar to what has been observed in California, resulting in novel species assemblages and shifts in functional composition, which in turn may alter ecosystem function. Warming generally increased nutrient availability and plant productivity across all sites. The seasonality of soil respiration responses to heating were strongly dependent on the Mediterranean climate gradient in the PNW, with heating responses being generally positive during periods of adequate soil moisture and becoming neutral to negative during periods of low soil moisture. The asynchrony between temperature and precipitation may make soils less sensitive to warming. Precipitation effects were minimal for all measured responses indicating the importance of increased temperatures in driving biotic responses to climate change in Mediterranean ecosystems. However, substantially increased precipitation during the dry season would almost certainly have profound effects, but the opposite is predicted by current climate change models for the PNW. A manipulative climate change experiment embedded within a natural climate gradient provides unique insights into the degree to which biotic responses to climate change are regionally consistent and site-dependent. Perhaps surprisingly, most climatic effects that we observed were either consistent in the three sites or could be readily interpreted in terms of the gradient of increasing intensity of the Mediterranean climate from north to south.
Climate change is restructuring forests of the United States, although the details of this restructuring are currently uncertain. Rising temperatures of 2 to 8oC and associated changes in soil moisture will shift the competitive balance between species that compete for light and water, and so change their abilities to produce seed, germinate, grow, and survive. We have used large-scale experiments to determine the effects of warming on the most sensitive stage of species distributions, i.e., recruitment, in mixed deciduous forests in southern New England and in the Piedmont region of North Carolina. Two questions organized our research: (1) Might temperate tree species near the “warm” end of their range in the eastern United States decline in abundance during the coming century due to projected warming? and (2) Might trees near the “cool” end of their range in the eastern United States increase in abundance, or extend their range, during the coming 100 years because of projected warming? To explore these questions, we exposed seedlings to air and soil warming experiments in two eastern deciduous forest sites; one at the Harvard Forest (HF) in central Massachusetts, and the other at the Duke Forest (DF) in the Piedmont region of North Carolina. We focused on tree species common to both Harvard and Duke Forests (such as red, black, and white oaks), those near northern range limits (black oak, flowing dogwood, tulip poplar), and those near southern range limits (yellow birch, sugar maple, Virginia pine). At each site, we planted seeds and seedlings in common gardens established in temperature-controlled, open-top chambers. The experimental design was replicated and fully factorial and involved three temperature regimes (ambient, +3oC and +5oC) and two light regimes (closed forest canopy (low light) and gap conditions (high light)). Measured variables included Winter/Spring responses to temperature and mid-Summer responses to low soil moisture. This research will advance our understanding of how the abundances and geographic distributions of several important eastern tree species near the cool and warm ends of their ranges will change during the century because of projected warming. Warming-induced changes in eastern tree abundances and distributions have the potential to affect both the quality and quantity of goods and services provided by eastern forests, and will therefore be of importance to society.
The steroid hormone brassinosteroid (BR) is a major growth-promoting phytohormone. The specific aim of the current project is to identify BR-regulated proteins and characterize their functions in various aspects of plant growth, development, and adaptation. Our research has significantly advanced our understanding of how BR signal is transduced from the receptor at the cell surface to changes of nuclear gene expression and other cellular responses such as vesicle trafficking, as well as developmental transitions such as seed germination and flowering. We have also developed effective proteomic methods for quantitative analysis of protein phosphorylation and for identification of glycosylated proteins. Through this DOE funding, we have performed several proteomic experiments and made major discoveries.
Chloroplasts (photosynthetic organelles) of higher plants contain about 3000 proteins, but fewer than 5% of these proteins are encoded by genes in the chloroplast. The rest are encoded by genes in the nucleus, which is a separate organelle within the plant cell. To avoid the accumulation of dangerous reactive oxygen species that are the inherent by-product of photosynthesis, gene expression of these spatially separated genomes is regulated by two-way signaling. Thus, while plastid differentiation and development are largely controlled by the nucleus and the proteins encoded within, developmentally arrested or damaged plastids can regulate expression of nuclear genes via retrograde signaling pathways. During the early years of this DOE-funded study, we performed a number of genetic screens to identify genes and protein involved in these signals. Based on the genes that we identified, we found that chloroplast gene expression and the chlorophyll (the major light-harvesting pigment that gives plant tissue its characteristic green color) biosynthetic pathway can act as the source of both positive and stress-related retrograde signals. We also found a new protein called GUN1, that plays a crucial role in retrograde signaling. Although the exact molecular mechanism of GUN1 remains a mystery, our work showed that it likely acts in the chloroplast to coordinate chloroplast gene expression with nuclear gene expression and to ensure that seedlings can quickly green after germination. Using that work as a foundation, we have recently uncovered a new type of retrograde signal that leads to the selective removal of damaged chloroplasts from the cell. We have only begun the characterization of this pathway, but our initial studies have suggested that this may be an extremely important mechanism that allows plants to adapt to stressful conditions. Together this will aid in the understanding of the developmental control of photosynthesis, the chloroplast assembly/disassembly pathways, and how plants adapt to stressful conditions. Ultimately, we hope this work will allow us to begin to engineer these crucial pathways into agriculturally important or bioenergy rich crops. This will be crucial to our quest for an abundant food supply and cheap, dependable sources of energy.
Plant seeds store nutrients in the form of protein, starch, and oil to support seed germination and seedling establishment. The seed nutrient reserves are supplied with carbon and nitrogen assimilated in vegetative tissues, where primary metabolism oscillates in a circadian manner (Farré and Weise, 2012). However, whether the nutrient accumulation in developing seeds is also tuned during the diurnal cycle remained unclear until now. In a recent study, Li et al. (2020) identified a signaling module at the nexus between nutrient accumulation in maize (Zea mays) seed and the diurnal cycle.
Vacuoles are essential in plants and serve roles in both protein and organelle degradation for reutilization and storage of high energy molecules such as storage proteins which are critical for seed germination under normal and stress conditions and impact biomass production and nutrition. In addition, plants secrete many different molecules such as cell wall components, lipids, waxes and others that are important for plant protection, structure and biomass. Vacuole accumulation and secretion are closely linked and highly regulated pathways within the endomembrane trafficking network. We have discovered many drug-like synthetic small molecules that can suppress vacuole trafficking and enhance secretion; other chemicals can enhance vacuole trafficking and suppress secretion. The ability of our compounds to modulate these pathways indicates that these pathways are tightly coupled and highly regulated. Thus, to achieve the goals of enhanced energy reserves or enhanced secretion it is essential to understand how this dynamic is controlled. Bioactive chemicals have provided us unique insight into natural mechanisms controlling the dynamics of vacuole trafficking and secretion that was not possible previously. One such compound, ES2, negatively modulates secretion while enhancing vacuole trafficking. This is the first compound discovered that targets an essential secretory complex known as the exocyst and will reveal important regulatory domains controlling secretion and vacuole trafficking. During the current funding period, we determined the structure of the EXO70A1 in plants and identifying its binding site. To understand the dynamics of vacuole trafficking it is key to have compounds that inhibit vacuole trafficking as well as enhancing it (ES2). We have used sophisticated image analysis to identify another novel compound ES17 that enhances secretion while negatively modulating vacuole trafficking (opposite of ES2). We have already made rapid progress. Our preliminary data indicates that ES17 very specifically targets a late stage of vesicle fusion with the tonoplast which is highly regulated. Thus, ES17 is an ideal compound to dissect the regulation of vacuole targeting dynamics. In addition, we have now synthesized a biotinylated version of ES17 that is fully functional, permitting the use of chemical proteomics to identify the cognate target with a high probability of success. We propose to investigate the ES17 target which can negatively modulate vacuole trafficking and combine this with knowledge of the ES2 target which can promote vacuole trafficking. Dissecting the mechanisms controlling the dynamics of secretion vs vacuole accumulation and the use of synthetic modulators will permit us to understand and regulate trafficking to enhance secretion to the plasma membrane and cell wall or the accumulation of biological energy reserves for increased biomass, nutritional value, stress resistance, and the secretion of specialized plant products.
Genetic mapping is a powerful tool for eukaryotic genetics that has only been applied to bacteria in limited circumstances. Quantitative trait locus (QTL) mapping generally relies on sexual recombination to break linkages between genes, yet bacteria rarely undergo sufficient homologous recombination to generate suitable mapping populations. In this work, we used iterative biparental genome shuffling by protoplast fusion inBacillus subtilisto generate a population of bacteria with substantial random recombination throughout their genomes. Individual shuffled progeny were arrayed in well plates, resequenced, and characterized for a range of complex phenotypes including spore germination and swarming motility. Genetic mapping of the resulting phenotypes identified high-confidence QTLs of moderate size (∼10 kb), and these associations were validated through targeted genetic swaps. ThisB. subtilisQTL population can easily be used to map additional phenotypes, and the general approach for QTL mapping is applicable in a wide range of bacteria.
The APETALA2/ethylene response factor (AP2/ERF) superfamily of transcription factors (TFs) plays essential roles in the regulation of various growth and developmental programs including stress responses. Members of these TFs in other plant species have been implicated to play a role in the regulation of cell wall biosynthesis. Here, we identified a total of 207 AP2/ERF TF genes in the switchgrass genome and grouped into four gene families comprised of 25 AP2-, 121 ERF-, 55 DREB (dehydration responsive element binding)-, and 5 RAV (related to API3/VP) genes, as well as a singleton gene not fitting any of the above families. The ERF and DREB subfamilies comprised seven and four distinct groups, respectively. Analysis of exon/intron structures of switchgrass AP2/ERF genes showed high diversity in the distribution of introns in AP2 genes versus a single or no intron in most genes in the ERF and RAV families. The majority of the subfamilies or groups within it were characterized by the presence of one or more specific conserved protein motifs. In silico functional analysis revealed that many genes in these families might be associated with the regulation of responses to environmental stimuli via transcriptional regulation of the response genes. Moreover, these genes had diverse endogenous expression patterns in switchgrass during seed germination, vegetative growth, flower development, and seed formation. Interestingly, several members of the ERF and DREB families were found to be highly expressed in plant tissues where active lignification occurs. These results provide vital resources to select candidate genes to potentially impart tolerance to environmental stress as well as reduced recalcitrance. Furthermore, overexpression of one of the ERF genes ( PvERF001 ) in switchgrass was associated with increased biomass yield and sugar release efficiency in transgenic lines, exemplifying the potential of these TFs in the development of lignocellulosic feedstocks with improved biomass characteristics for biofuels.
Introductions and invasions by fungi, especially pathogens and mycorrhizal fungi, are widespread and potentially highly consequential for native ecosystems, but may also offer opportunities for linking microbial traits to their ecosystem functions. In particular, treating ectomycorrhizal (EM) invasions, i.e., co-invasions by EM fungi and their EM host plants, as natural experiments may offer a powerful approach for testing how microbial traits influence ecosystem functions. Forests dominated by EM symbiosis have unique biogeochemistry whereby the secretions of EM plants and fungi affect carbon (C) and nutrient cycling; moreover, particular lineages of EM fungi have unique functional traits. EM invasions may therefore alter the biogeochemistry of the native ecosystems they invade, especially nitrogen (N) and C cycling. By identifying “response traits” that favor the success of fungi in introductions and invasions (e.g., spore dispersal and germination) and their correlations with “effect traits” (e.g., nutrient-cycling enzymes) that can alter N and C cycling (and affect other coupled elemental cycles), one may be able to predict the functional consequences for ecosystems of fungal invasions using biogeochemistry models that incorporate fungal traits. Here, we review what is already known about how EM fungal community composition, traits, and ecosystem functions differ between native and exotic populations, focusing on the example of EM fungi associated with species of Pinus introduced from the Northern into the Southern Hemisphere. We develop hypotheses on how effects of introduced and invasive EM fungi may depend on interactions between soil N availability in the exotic range and EM fungal traits. We discuss how such hypotheses could be tested by utilizing Pinus introductions and invasions as a model system, especially when combined with controlled laboratory experiments. Finally, we illustrate how ecosystem modeling can be used to link fungal traits to their consequences for ecosystem N and C cycling in the context of biological invasions, and we highlight exciting avenues for future directions in understanding EM invasion.
Membrane active transporters play essential roles in microbial physiology. They couple energy transduction to conformational changes that drive translocation of nutrients, substrates and ions, as well as molecular communication. The structure and function of microbial membrane active transporters are highly diverse. Typical examples include the primary active transporters in the ATP-binding cassette (ABC) superfamily (Thomas and Tampé, 2020; Davidson et al., 2008; Locher et al., 2002), the secondary active transporters in the Major Facilitator Superfamily (MFS) (Drew et al., 2021; Kaback and Guan, 2019), and the ligand-gated porins in the TonB-dependent transporter (TBDT) family (Klebba et al., 2021). As structural, proteogenomic, and computational methods advance, active transporters are increasingly recognized as dynamic molecular machines whose mechanisms can now be visualized and modeled with remarkable precision, building on decades of biochemical and biophysical discovery that established the foundations of this field. The transporter studies recruited in this Research Topic provide us with new insights into the field including structure-function of sugar transporters in yeast, structural prediction and classification of ABC complexes in Bacillus subtilis, Type VI Secretion System (T6SS) in Bacteroides fragilis, amino acids uptake in Escherichia coli and bacterial spore germination.
Low linear energy transfer (LET) gamma rays and high LET HZE (high atomic weight, high energy) particles act as powerful mutagens in both plants and animals. DNA damage generated by HZE particles is more densely clustered than that generated by gamma rays. To understand the genetic requirements for resistance to high versus low LET radiation, a series of Arabidopsis thaliana mutants were exposed to either 1GeV Fe nuclei or gamma radiation. A comparison of effects on the germination and subsequent growth of seedlings led us to conclude that the relative biological effectiveness (RBE) of the two types of radiation (HZE versus gamma) are roughly 3:1. Similarly, in wild-type lines, loss of somatic heterozygosity was induced at an RBE of about a 2:1 (HZE versus gamma). Checkpoint and repair defects, as expected, enhanced sensitivity to both agents. The “replication fork” checkpoint, governed by ATR, played a slightly more important role in resistance to HZE-induced mutagenesis than in resistance to gamma induced mutagenesis.
Protein bodies (PBs) are organelles found in seeds whose main function is the storage of proteins that are used during germination for sustaining growth. PBs can also be induced to form in leaves when foreign proteins are produced at high levels in the endoplasmic reticulum (ER) and when fused to one of three tags: Zera®, elastin-like polypeptides (ELP), or hydrophobin-I (HFBI). Here in this study, we investigate the differences between ELP, HFBI and Zera PB formation, packing, and communication. Our results confirm the ER origin of all three fusion-tag-induced PBs. We show that secretory pathway proteins can be sequestered into all types of PBs but with different patterns, and that different fusion tags can target a specific protein to different PBs. Zera PBs are mobile and dependent on actomyosin motility similar to ELP and HFBI PBs. We show in vivo trafficking of proteins between PBs using GFP photoconversion. We also show that protein trafficking between ELP or HFBI PBs is faster and proteins travel further when compared to Zera PBs. Our results indicate that fusion-tag-induced PBs do not represent terminally stored cytosolic organelles, but that they form in, and remain part of the ER, and dynamically communicate with each other via the ER. We hypothesize that the previously documented PB mobility along the actin cytoskeleton is associated with ER movement rather than independent streaming of detached organelles.
Light is a critical environmental stimulus for plants, serving as an energy source via photosynthesis and a signal for developmental programming. Plants perceive light through various light-responsive proteins, termed photoreceptors. Phytochromes are red-light photoreceptors that are highly conserved across kingdoms. In the model plant Arabidopsis thaliana , phytochrome B serves as a light and thermal sensor, mediating physiological processes such as seedling germination and establishment, hypocotyl growth, chlorophyll biogenesis, and flowering. In response to red light, phytochromes convert to a biologically active form, translocating from the cytoplasm into the nucleus and further compartmentalizes into subnuclear compartments termed photobodies. PhyB photobodies regulate phytochrome-mediated signaling and physiological outputs. However, photobody function, composition, and biogenesis remain undefined since their discovery. Based on photobody cellular dynamics and the properties of internal components, photobodies have been suggested to undergo liquid-liquid phase separation, a process by which some membraneless compartments form. Here, we explore photobodies as environmental sensors, examine the role of their protein constituents, and outline the biophysical perspective that photobodies may be undergoing liquid-liquid phase separation. Understanding the molecular, cellular, and biophysical processes that shape how plants perceive light will help in engineering improved sunlight capture and fitness of important crops.
Porcine reproductive and respiratory syndrome (PRRS) is a highly contagious viral disease that causes significant economic losses to the swine industry worldwide. PRRS virus (PRRSV) infection is a receptor-mediated endocytosis and replication process. The purpose of this study was to determine the localization and expression of four important PRRSV receptors in immunological organs of piglets. After piglets were infected with PRRSV, Hematoxylin and Eosin staining, immunofluorescence, and Western blot were used to perform histopathological examination and receptors distribution analysis. The results showed that PRRSV caused severe damage to the piglets’ immune organs, including atrophy of the thymus and swelling of lymph node. Histopathological lesions were mainly observed in the lung and lymph node and were characterized by interstitial pneumonia, collapsed follicles, exhaustion of germinal centers, and extensive hemorrhage. Immunofluorescence staining and Western blot results showed that the receptors of CD163 and NMHCII-A were mainly distributed in the thymus, hilar lymph nodes, and mesenteric lymph nodes. However, Sn and vimentin receptors were expressed at low levels in the immune organs of piglets. The distribution of the four receptors in the immune organs was more concentrated in the cortex but was more scattered in the medulla. Compared to the control group, the relative expression of the four receptors increased significantly in most immune organs after viral infection. In conclusion, our study examined the distribution and expression of four PRRSV receptors in immunological organs. We observed a significant increase in the expression of Sn, CD163, and vimentin following viral infection. These findings may provide potential targets for future antiviral reagent design or vaccine development.
Interactions between plant-associated fungi and their hosts are characterized by a continuous crosstalk of chemical molecules. Specialized metabolites are often produced during these associations and play important roles in the symbiosis between the plant and the fungus, as well as in the establishment of additional interactions between the symbionts and other organisms present in the niche. Serendipita indica, a root endophytic fungus from the phylum Basidiomycota, is able to colonize a wide range of plant species, conferring many benefits to its hosts. The genome of S. indica possesses only few genes predicted to be involved in specialized metabolite biosynthesis, including a putative terpenoid synthase gene (SiTPS). In our experimental setup, SiTPS expression was upregulated when the fungus colonized tomato roots compared to its expression in fungal biomass growing on synthetic medium. Heterologous expression of SiTPS in Escherichia coli showed that the produced protein catalyzes the synthesis of a few sesquiterpenoids, with the alcohol viridiflorol being the main product. To investigate the role of SiTPS in the plant-endophyte interaction, an SiTPS-over-expressing mutant line was created and assessed for its ability to colonize tomato roots. Although overexpression of SiTPS did not lead to improved fungal colonization ability, an in vitro growth-inhibition assay showed that viridiflorol has antifungal properties. Addition of viridiflorol to the culture medium inhibited the germination of spores from a phytopathogenic fungus, indicating that SiTPS and its products could provide S. indica with a competitive advantage over other plant-associated fungi during root colonization.