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DOE OSTI2024

A Prototype Software to Demonstrate a Data Catalog for Hanford Environmental Datasets

Ensuring that data on long-term environmental remediation at the Hanford Site is high-quality, traceable, and easily accessible is an ongoing challenge, complicated by decades of data collection, multiple contractors maintaining data sources, and the wide range of data types. A centralized data catalog, known as the Hanford Environmental Information and Data Index (HEIDI), has been under development as part of the Hanford Environmental Data Management (HEDM) program to address these challenges. HEIDI fulfills a critical need to bring together a wide range of data types and sizes from multiple authoritative data sources, while documenting the data pedigree and quality information (i.e., traceable to the data source/originator). This document describes additional development and maturation of the HEIDI prototype. Key accomplishments included deploying the catalog software, Esri Geoportal Server, on a server accessible to Hanford Local Area Network users, conducting cybersecurity evaluations, investigating integrated authentication solutions, and conducting functional testing of the catalog prototype. The server-based deployment enabled targeted feedback, leading to enhancements including improved accessibility features and an expanded metadata schema. Specifications for the server-based deployment of the prototype catalog and the HEIDI metadata schema are provided in this document to support subsequent HEIDI deployment by the U.S. Department of Energy Richland Operations Office.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Iterative and Self-Consistent Estimation of Degradation and Soiling Loss in PV Systems - A Case Study

In many parts of the world, soiling is a significant loss mechanism for PV energy production. Methods for accurately quantifying historical and current soiling losses are needed. Furthermore, state-of-the-art methods to estimate degradation rates based on production data do not handle soiling in a satisfactory manner. In order to accurately estimate either of these quantities, it is in many cases helpful to consider their combined effect on PV system performance. In this work we make use of the Combined Degradation and Soiling (CODS) algorithm, which iteratively decomposes time series of daily normalized energy yield into four components: a soiling ratio, a degradation trend, seasonal variations, and noise. We demonstrate the use of the model on field performance data from a utility-scale power plant in a high-soiling environment in the Middle East. We apply the algorithm to the temperature-corrected performance index of the DC power on inverter level, quantifying how soiling varies over time and through the plant. The irradiation-weighted average soiling loss in this plant is 2.3 %, with a median soiling rate of -0.086 %/day. Between the inverters in the site in study, estimated degradation rates range between -0.86 %/year and -0.15 %/year, with a mean rate of -0.48 %/year.

41 EE - Solar Energy Technologies Office (EE-4S)↗

DOE OSTI2024

Development of a plant carbon–nitrogen interface coupling framework in a coupled biophysical-ecosystem–biogeochemical model (SSiB5/TRIFFID/DayCent-SOM v1.0)

Plant and microbial nitrogen (N) dynamics and N availability regulate the photosynthetic capacity and capture, allocation, and turnover of carbon (C) in terrestrial ecosystems. Studies have shown that a wide divergence in representations of N dynamics in land surface models leads to large uncertainties in the biogeochemical cycle of terrestrial ecosystems and then in climate simulations as well as the projections of future trajectories. In this study, a plant C–N interface coupling framework is developed and implemented in a coupled biophysical-ecosystem–biogeochemical model (SSiB5/TRIFFID/DayCent-SOM v1.0). The main concept and structure of this plant C–N framework and its coupling strategy are presented in this study. This framework takes more plant N-related processes into account. The dynamic ratio (CNR) for each plant functional type (PFT) is introduced to consider plant resistance and adaptation to N availability to better evaluate the plant response to N limitation. Furthermore, when available N is less than plant N demand, plant growth is restricted by a lower maximum carboxylation capacity of RuBisCO (V c,max ), reducing gross primary productivity (GPP). In addition, a module for plant respiration rates is introduced by adjusting the respiration with different rates for different plant components at the same N concentration. Since insufficient N can potentially give rise to lags in plant phenology, the phenological scheme is also adjusted in response to N availability. All these considerations ensure a more comprehensive incorporation of N regulations to plant growth and C cycling. This new approach has been tested systematically to assess the effects of this coupling framework and N limitation on the terrestrial carbon cycle. Long-term measurements from flux tower sites with different PFTs and global satellite-derived products are employed as references to assess these effects. The results show a general improvement with the new plant C–N coupling framework, with more consistent emergent properties, such as GPP and leaf area index (LAI), compared to the observations. The main improvements occur in tropical Africa and boreal regions, accompanied by a decrease in the bias in global GPP and LAI by 16.3 % and 27.1 %, respectively.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Soil fertility and drought interact to determine large variations in wood production for a hyperdominant Amazonian tree species

The productivity of the Amazon Rainforest is related to climate and soil fertility. However, the degrees to which these interactions influence multiannual to decadal variations in tree diameter growth are still poorly explored. To fill this gap, we used radiocarbon measurements to evaluate the variation in tree growth rates over the past decades in an important hyperdominant species, Eschweilera coriacea (Lecythidaceae), from six sites in the Brazilian Amazon that span a range of soil properties and climate. Using linear mixed-effects models, we show that temporal variations in mean annual diameter increment evaluated over a specific time period reflect interactions between soil fertility and the drought index (SPEI-Standardized Precipitation and Evapotranspiration Index). Our results indicate that the growth response of trees to drought is strongly dependent on soil conditions, a facet of forest productivity that is still underexplored, and which has great potential for improving predictions of future tropical tree growth in the face of projected climate change.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2023

CLASS Observation of Polarized Cloud Emission at Millimeter Wavelengths

The dynamic atmosphere imposes challenges to ground-based cosmic microwave background observation, especially for measurements on large angular scales. The hydrometeors in the atmosphere, mostly in the form of clouds, scatter the ambient thermal radiation and are known to be the main linearly polarized source in the atmosphere. This scattering-induced polarization is significantly enhanced for ice clouds due to the alignment of ice crystals under gravity, which are also the most common clouds seen at the millimeter-astronomy sites at high altitudes. This work presents a multifrequency study of cloud polarization observed by the Cosmology Large Angular Scale Surveyor experiment on Cerro Toco in the Atacama Desert of northern Chile, from 2016–2022, at the frequency bands centered around 40, 90, 150, and 220 GHz. Using a machine-learning-assisted cloud classifier, we made connections between the transient polarized emission found in all four frequencies with the clouds imaged by monitoring cameras at the observing site. The polarization angles of the cloud events are found to be mostly 90° from the local meridian, which is consistent with the presence of horizontally aligned ice crystals. The90 and 150 GHz polarization data are consistent with a power law with a spectral index of 3.90±0.06, while an excess/deficit of polarization amplitude is found at 40/220 GHz compared with a Rayleigh scattering spectrum. These results are consistent with Rayleigh-scattering-dominated cloud polarization, with possible effects from supercooled water absorption and/or Mie scattering from a population of large cloud particles that contribute to the220 GHz polarization.

Earth's clouds↗

DOE OSTI2022

Influence of landscape attributes on Virginia opossum density

Abstract The Virginia opossum ( Didelphis virginiana ), North America's only marsupial, has a range extending from southern Ontario, Canada, to the Yucatan Peninsula, Mexico, and from the Atlantic seaboard to the Pacific. Despite the Virginia opossum's taxonomic uniqueness in relation to other mammals in North America and rapidly expanding distribution, its ecology remains relatively understudied. Our poor understanding of the ecology of this important mesopredator is especially pronounced in the rural southeastern United States. Our goal was to estimate effects of habitat on opossum density within an extensive multi‐year spatial capture‐recapture study. Additionally, we compared the results of this spatial capture‐recapture analysis with a simple relative abundance index. Opossum densities in the relatively underdeveloped regions of the southeastern United States were lower compared to the more human‐dominated landscapes of the Northeast and Midwest. In the southeastern United States, Virginia opossums occurred at a higher density in bottomland swamp and riparian hardwood forest compared to upland pine ( Pinus spp.) plantations and isolated wetlands. These results reinforce the notion that the Virginia opossum is commonly associated with land cover types adjacent to permanent water (bottomland swamps, riparian hardwood). The relatively low density of opossums at isolated wetland sites suggests that the large spatial scale of selection demonstrated by opossums gives the species access to preferable cover types within the same landscape.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Leaf gas exchange and fitted parameters, two sites in Panama, 2022

Photosynthetic CO2 response curves (ACi curves), light response curves (AQ curves), dark adapted dark respiration, conductance curves, and survey measurements for leaves measured in the Parque Natural Metropolitano (PNM) and Gamboa, Panama, from January to April 2022 are presented. Measurements were made on leaves from 46 different tree, shrub and liana species, from sunlit canopy and understory locations. Leaf area index from 8 vertical profiles at PNM are also included. The aim of this measurement campaign was three-fold: (i) to improve our understanding of the vertical variation in leaf-level water use efficiency; (ii) to develop an understanding of the sensitivity of stomata to changes in environmental conditions, especially light, humidity, and temperature; (iii) to improve models which can predict leaf traits from leaf contact spectral measurements. All the gas exchange data and metadata are presented in .csv files and complete instrument output are included in .zip folders. Data and metadata meet the ESS-DIVE leaf-level gas exchange reporting format requirements. The protocol details are provided as pdf documents. In addition to gas exchange data reported here these samples were also used for measurement of leaf optical properties, carbon and nitrogen content, and leaf mass per unit leaf area (LMA). These data can be cross linked using the unique sample ID and are provided in separate data packages.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

Consolidation and Permeability of the B1 and D1 Gas Hydrate Bearing Sands and Associated Seal Sediments of the Extended-Duration Gas Production Test Site on the Alaska North Slope

Gas hydrate, a solid combination of gas (mostly methane in nature) and water molecules stable at low temperatures and elevated pressures, occurs naturally in marine and permafrost-associated environments. Gas hydrate reservoirs, such as those in the Alaska North Slope, have been considered potential energy resources for gas production. To understand the petrophysical and geo-mechanical characteristics of the reservoir, core samples retrieved from the site of the JOGMEC-DOE-USGS collaborative gas hydrate R&D project have been analyzed in the laboratory for their hydraulic and mechanical properties. This paper focuses on both seal and reservoir samples associated with the B1 and D1 sands, which are evaluated for index properties (including porosity, grain size distribution, liquid and plastic limits, specific surface area, and specific gravity), consolidation, permeability, and water retention. Furthermore, the reservoir core samples were tested with pore-filling, laboratory-grown tetrahydrofuran hydrate, in order to assess reservoir behavior during gas production from hydrates. Under simulated in situ stress conditions, the seal and hydrate-free reservoir cores had a permeability anisotropy ratio of k h /k v = 3.0−5.0, and k h /k v = 2.4−3.0 for the reservoir tetrahydrofuran hydrate-bearing cores. The data suggest that depressurizing the reservoir to induce hydrate dissociation alters the reservoir effective permeability in three ways: permeabilities decrease due to porosity lost (e.g., the initial reservoir thickness can decrease by up to 5% upon 7 MPa depressurization), permeability increases due to the loss of solid hydrate in the pore space, and permeability anisotropy k h /k v decreases in response to the evolving pore-space geometry. We show that given the simulated in situ gas hydrate saturations (i.e., S h = 32% in core 7P-2E and S h = 21% in core 20P-4), gas production from the dissociation of tetrahydrofuran hydrate in the two tested cores results in a net increase in effective permeability and a decrease in k h /k v . This study highlights the importance of investigating seal and reservoir sediments and the impacts of depressurization on the porosity and permeability responses during production.

Geological materials↗

DOE OSTI2023

Alternative Splicing Events

Inclusion levels of alternative splicing (AS) events of five different varieties (i.e. skipped exon (SE), retained intron (RI), alternative 5’ splice site (A5SS), alternative 3’ splice site (A3SS), and mutually exclusive exons (MXE)) were measured in human blood samples from two separate cohorts of patients. Cohort 1 (Training Cohort): 12 healthy controls; 12 new onset type 1 diabetic (T1D) cases cases and controls matched on biological sex, age, and body mass index (BMI) 180 million reads Cohort 2 (Testing Cohort): 12 healthy controls; 12 new onset type 1 diabetic (T1D) cases cases and controls matched on biological sex and age. BMI not recorded. 150 million reads

Webb-Robertson, Bobbie-Jo M↗

DOE OSTI2023

Human Islet Research Network (HIRN): Alternative Splicing Events

Webb-Robertson, Bobbie-Jo M↗

NASA NTRS2019

Evaluation of the Surface Reflectance Long-Term Data Record from AVHRR over Multiple Land Surface Types

In this work, we evaluate the performance of the AVHRR surface reflectance LTDR V4 using Landsat-5 Thematic Mapper (TM5) Collection-1 surface reflectance data over 440 globally distributed sites, which give a representative set of land surface types and climate conditions. Surface reflectance anisotropy effects were normalized using the VJB method, and spectral response differences were accounted for with spectral band adjustment factors (SBAFs) computed as a function of the Normalized Difference Vegetation Index (NDVI) from a set of over 100,000 hyperspectral spectra from Hyperion. The performance of the AVHRR record is reported in terms of the accuracy, precision, and uncertainty, as compared to the specifications of the reference product. Results show that the AVHRR record performance is close to the 0.071ρ+0.0071 specification defined in the original TM5 product evaluation.

LTDR↗

NASA NTRS2022

Inferring iron-oxide species content in atmospheric mineral dust from DSCOVR EPIC observations

The iron-oxide content of dust in the atmosphere and most notably its apportionment between hematite (α-Fe2O3) and goethite (α-FeOOH) are key determinants in quantifying dust’s light absorption, its top of atmosphere UV radiances used for dust monitoring, and ultimately shortwave dust direct radiative effects (DRE). Hematite and goethite column mass concentrations and iron-oxide mass fractions of total dust mass concentration were retrieved from the DeepSpace Climate Observatory (DSCOVR) Earth Polychromatic Imaging Camera (EPIC) measurements in the ultraviolet–visible (UV–Vis) channels. The retrievals were performed for dust-identified aerosol plumes over land using aerosol optical depth (AOD) and spectral imaginary refractive index provided by the Multi-Angle Implementation of Atmospheric Correction (MAIAC) algorithm over six continental regions (North America, North Africa, West Asia, Central Asia, EastAsia, and Australia). The dust particles are represented as an internal mixture of non-absorbing host and absorbing hematite and goethite. We use the Maxwell–Garnett effective medium approximation with carefully selected complex refractive indices of hematite and goethite that produce mass fractions of iron oxides species consistent with in situ values found in the literature to derive the hematite and goethite volumetric/mass concentrations from MAIAC EPIC products. We compared the retrieved hematite and goethite concentrations with in situ dust aerosol mineralogical content measurements, as well as with published data. Our data display variations within the published range of hematite, goethite, and iron-oxide mass fractions for pure mineral dust cases. A specific analysis is presented for 15 sites over the main dust source regions. Sites in the central Sahara, Sahel, and Middle East exhibit a greater temporal variability of iron oxides relative to other sites. Niger site(13.52°N, 2.63°E) is dominated by goethite over Harmattan season with median of ~2 weight percentage (wt.%) of iron-oxide. Saudi Arabia site (27.49°N, 41.98°E) over Middle East also exhibited surge of goethite content with the beginning of Shamal season. The Sahel dust is richer in iron-oxide than Saharan and northern China dust except in Summer. The Bodélé Depression area shows a distinctively lower iron-oxide concentration (~1 wt.%) throughout the year. Finally, we show that EPIC data allow to constrain the hematite refractive index. Specifically, we select 5 out of 13 different number of hematite refractive indices widely variable in published laboratory studies by constraining the iron-oxide mass ratio to the known measured values. Provided climatology of hematite and goethite mass fractions across main dust regions of the Earth will be useful for dust shortwave DRE studies and climate modeling.

Sujung Go↗

NASA NTRS2011

Generic, Extensible, Configurable Push-Pull Framework for Large-Scale Science Missions

The push-pull framework was developed in hopes that an infrastructure would be created that could literally connect to any given remote site, and (given a set of restrictions) download files from that remote site based on those restrictions. The Cataloging and Archiving Service (CAS) has recently been re-architected and re-factored in its canonical services, including file management, workflow management, and resource management. Additionally, a generic CAS Crawling Framework was built based on motivation from Apache s open-source search engine project called Nutch. Nutch is an Apache effort to provide search engine services (akin to Google), including crawling, parsing, content analysis, and indexing. It has produced several stable software releases, and is currently used in production services at companies such as Yahoo, and at NASA's Planetary Data System. The CAS Crawling Framework supports many of the Nutch Crawler's generic services, including metadata extraction, crawling, and ingestion. However, one service that was not ported over from Nutch is a generic protocol layer service that allows the Nutch crawler to obtain content using protocol plug-ins that download content using implementations of remote protocols, such as HTTP, FTP, WinNT file system, HTTPS, etc. Such a generic protocol layer would greatly aid in the CAS Crawling Framework, as the layer would allow the framework to generically obtain content (i.e., data products) from remote sites using protocols such as FTP and others. Augmented with this capability, the Orbiting Carbon Observatory (OCO) and NPP (NPOESS Preparatory Project) Sounder PEATE (Product Evaluation and Analysis Tools Elements) would be provided with an infrastructure to support generic FTP-based pull access to remote data products, obviating the need for any specialized software outside of the context of their existing process control systems. This extensible configurable framework was created in Java, and allows the use of different underlying communication middleware (at present, both XMLRPC, and RMI). In addition, the framework is entirely suitable in a multi-mission environment and is supporting both NPP Sounder PEATE and the OCO Mission. Both systems involve tasks such as high-throughput job processing, terabyte-scale data management, and science computing facilities. NPP Sounder PEATE is already using the push-pull framework to accept hundreds of gigabytes of IASI (infrared atmospheric sounding interferometer) data, and is in preparation to accept CRIMS (Cross-track Infrared Microwave Sounding Suite) data. OCO will leverage the framework to download MODIS, CloudSat, and other ancillary data products for use in the high-performance Level 2 Science Algorithm. The National Cancer Institute is also evaluating the framework for use in sharing and disseminating cancer research data through its Early Detection Research Network (EDRN).

Foster, Brian M.↗

DOE OSTI2022

Detecting Coastal Wetland Degradation by Combining Remote Sensing and Hydrologic Modeling

Sea-level rise and climate change stresses pose increasing threats to coastal wetlands that are vital to wildlife habitats, carbon sequestration, water supply, and other ecosystem services with global significance. However, existing studies are limited in individual sites, and large-scale mapping of coastal wetland degradation patterns over a long period is rare. Our study developed a new framework to detect spatial and temporal patterns of coastal wetland degradation by analyzing fine-scale, long-term remotely sensed Normalized Difference Vegetation Index (NDVI) data. Then, this framework was tested to track the degradation of coastal wetlands at the Alligator River National Wildlife Refuge (ARNWR) in North Carolina, United States, during the period from 1995 to 2019. We identified six types of coastal wetland degradation in the study area. Most of the detected degradation was located within 2 km from the shoreline and occurred in the past five years. Further, we used a state-of-the-art coastal hydrologic model, PIHM-Wetland, to investigate key hydrologic processes/variables that control the coastal wetland degradation. The temporal and spatial distributions of simulated coastal flooding and saltwater intrusion confirmed the location and timing of wetland degradation detected by remote sensing. The combined method also quantified the possible critical thresholds of water tables for wetland degradation. The remote sensing–hydrologic model integrated scheme proposed in this study provides a new tool for detecting and understanding coastal wetland degradation mechanisms. Our study approach can also be extended to other coastal wetland regions to understand how climate change and sea-level rise impact wetland transformations.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1991

An overview of the results of the FIFE-87 and FIFE-89 campaigns

Results of a major land surface-atmosphere exchange study, the First ISLSCP Field Experiment (FIFE) are summarized. Findings result from nearly 80 days of field measurements over a 15 kilometer square area involving 30 science teams, seven remote sensing aircraft, and 5 satellites which acquired over 1200 low resolution and 35 high spatial resolution satellite images, maps of remotely sensed temperature, vegetation index and soil moisture, surface flux measurements from more than 20 ground stations and airborne sensors, and transects of vegetation, soil moisture and soil chemistry. Relationships between in situ, airborne, and spaceborne remote measurements and the problem of scaling will be discussed. Energy balance comparisons among sites were made. Diurnal measurements of latent heat fluxes indicated a strong correlation between the evaporative fraction at midday and the daytime average value.

Murphy, R. E.↗

NASA NTRS1990

The use of remotely sensed surface temperature and a spectral vegetation index for evaluating heat fluxes over the Konza Prairie

The relationship between surface temperature T(s) and the normalized difference vegetation index (NDVI) is examined to determine whether it can be used to characterize latent heat fluxes (LEs). The regression of T(s) on NDVI is studied in the context of surface heat fluxes over the prairie with a limited data set for four flux-measurement sites. The 17 flux-measurement stations at the sites provided data that are consistently significant at the 99-percent confidence level for the regression of T(s) on NDVI. Variations in the regression slopes are found to correlate with variations in the ground heat flux but not with LE. Important components of the regression of T(s) on NDVI include fractional vegetation cover and surface-soil moisture conditions. The relationship is important for determining the relative contributions of the soil and vegetation components of an area's total evaporative flux.

Hope, A. S.↗

NASA NTRS2019

Success of Montreal Protocol Demonstrated by Comparing High-Quality UV Measurements with “World Avoided” Calculations from Two Chemistry-Climate Models

The Montreal protocol on Substances that Deplete the ozone Layer has been hailed as the most successful environmental treaty ever (https://www.unenvironment.org/news-and-stories/story/montreal-protocol-triumph-treaty). Yet, although our main concern about ozone depletion is the subsequent increase in harmful solar UV radiation at the earth’s surface, no studies to date have demonstrated its effectiveness in that regard. Here we use long-term UV Index (UVI) data derived from high-quality UV spectroradiometer measurements to demonstrate its success in curbing increases in UV radiation. Without this landmark agreement, UVi values would have increased at mid-latitude locations by approximately 20% between the early 1990s and today and would approximately quadruple at mid-latitudes by 2100. In contrast, an analysis of UVI data from multiple clean-air sites shows that maximum daily UVI values have remained essentially constant over the last ~20 years in all seasons, and may even have decreased slightly in the southern hemisphere, especially in Antarctica, where effects of ozone depletion were larger. Reconstructions of the UVi from total ozone data show evidence of increasing UVI levels in the 1980s, but unfortunately, there are no high-quality UV measurements available prior to the early 1990s to confirm these increases with direct observations.

UV Index (UVI) data derived from high-quality UV s↗

DOE OSTI2026

Evapotranspiration partitioning estimates from 8 methods from 47 NEON sites, 2019-2021

This dataset provides daily estimates of evapotranspiration (ET) and the transpiration-to-evapotranspiration ratio (T/ET) across 47 terrestrial National Ecological Observatory Network (NEON) sites spanning diverse environmental and biome conditions in the United States across three years of data (2019-2021). Daily ET is reported in both energy units (MJ m⁻² day⁻¹) and equivalent water depth (mm day⁻¹), assuming a constant latent heat of vaporization of 2.45 MJ/kg. The primary method uses a hybrid recurrent neural network–Penman–Monteith framework (RNN-PM), which integrates physically based surface energy balance constraints with data-driven learning to partition ET into transpiration and evaporation components. Model inputs include in situ meteorological observations (air temperature, vapor pressure deficit, wind speed, and radiation) combined with satellite-derived land surface temperature, leaf area index, and soil moisture. For benchmarking and uncertainty assessment, T/ET estimates from seven additional models are included: Priestley-Taylor Jet Propulsion Laboratory (PT-JPL), Penman-Monteith (P-M), Two-Source Energy Balance (TSEB), Support Vector Regression (SVR), and Categorical Boosting (CatBoost), among others—spanning empirical, machine-learning, and process-based approaches (see methods section or linked publication for detailed descriptions). Data Package Contents: The dataset a csv files containing daily ET and T/ET estimates for each site and model, along with associated metadata files these variables. Data can be accessed using common spreadsheet software (e.g., Microsoft Excel, LibreOffice) or programming environments such as R or Python. Together, these data support cross-site comparisons of ecosystem water use, evaluation of ET partitioning methods, and development of improved land–atmosphere exchange models.

EARTH SCIENCE > ATMOSPHERE↗