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At least 361 records · Page 20

A Dominant Arabidopsis Thaliana ACTIN7 Mutant for Studies of Cytoskeletal-Mediated Root Gravity and Spaceflight Stress Responses

A forward genetic screen for Arabidopsis thaliana mutants that exhibited differential sensitivity to the actin-disrupting compound, latrunculin B (LatB), was conducted to uncover new players involved in actin-mediated root gravity responses. This led to the isolation of a mutant that exhibited robust primary root growth at 100 nM LatB, which is a concentration that severely inhibits wild-type root elongation. Phenotypic analysis revealed that hypocotyl elongation in the dark and root hair tip growth in the mutant could tolerate LatB concentrations that impaired these processes in wild type. A cross between the mutant and wild type resulted in progeny resistance to LatB, which indicated that the mutant is dominant (hereafter referred to as LBR1 for LatB Resistant1). Filamentous-actin (F-actin) organization in LBR1 primary roots remained intact at 100 nM LatB, while that of wild type exhibited fragmented F-actin. Next generation sequencing revealed that LBR1 had a single nucleotide polymorphism (SNP) in the AT5G09810 gene that changed cytosine to a thiamine at the first exon. AT5G09810 encodes ACTIN7 (ACT7), which is one of three vegetative actin isoforms in A. thaliana. The SNP in the ACT7 gene led to a change in a single amino acid from proline at position 32 to a serine. Transgenic complementation of LBR1 plants with wild-type ACT7 under the control of the ACT7 promoter (pACT7:ACT7) and wild-type plants with LBR1, which contained the proline to serine mutation, also under the ACT7 promoter (pACT7:LBR1) confirmed that LBR1 is ACT7. The pACT7:LBR1 construct was also able to confer LatB resistance to the act7-5 and act2-3 vegetative ACT mutants. Moreover, LBR1 exhibited partial tolerance to salt and low phosphate, and enhanced root skewing on a clinostat, suggesting that site-directed engineering of vegetative ACT presents a strategy for generating stress-tolerant plants for spaceflight applications and studies of actin-mediated gravity responses.

Plant Space Biology↗

Microbial Responses to Radiation at the Single-Cell Level

Exploring the biological effects of deep space radiation is crucial for developing protective protocols for humans traveling beyond Earth’s magnetosphere. Saccharomyces cerevisiae, or budding yeast, is an ideal model organism to study the effects of radiation on eukaryotes as it shares several pathways with humans, including DNA repair mechanisms. Here, we used time-lapse imaging of colony growth on agar plates to monitor the effects of radiation exposure on individual yeast cells and their progeny.

Paola J. Maldonado Martinez↗

Cells Forming Acini

Berkeley Lab researchers have discovered a rotational motion in human breast cells that continues through mitosis and enables the cells and their progeny to form sphere-shaped acini.

59 BASIC BIOLOGICAL SCIENCES↗

Switchgrass cultivar

A new cultivar of switchgrass `Cimarron` (SL93 2001-1) having increased biomass yield is provided. The switchgrass comprises all the morphological and physiological properties of the cultivar grown from a seed deposited under American Type Culture Collection (ATCC) No. PTA-10116. The invention also provides seeds, progeny, parts and methods of use of Cimarron, such as for the production of biofuels.

60 APPLIED LIFE SCIENCES↗

Thionin-D4E1 chimeric protein protects plants against bacterial infections

The generation of a chimeric protein containing a first domain encoding either a pro-thionon or thionin, a second domain encoding D4E1 or pro-D4E1, and a third domain encoding a peptide linker located between the first domain and second domain is described. Either the first domain or the second domain is located at the amino terminal of the chimeric protein and the other domain (second domain or first domain, respectively) is located at the carboxyl terminal. The chimeric protein has antibacterial activity. Genetically altered plants and their progeny expressing a polynucleotide encoding the chimeric protein resist diseases caused by bacteria.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Radiation detector

Alpha particle detecting devices are disclosed that have a chamber that can hold a fluid in a tensioned metastable state. The chamber is tuned with a suitable fluid and tension such that alpha emitting materials such as radon and one or more of its decay products can be detected. The devices can be portable and can be placed in areas, such as rooms in dwellings or laboratories and used to measure radon in these areas, in situ and in real time. The disclosed detectors can detect radon at and below 4 pCi/L in air; also, at and below 4,000 pCi/L or 300 pCi/L in water. When the fluid is tensioned the presence of radon can be determined by the formation of bubbles which give off detectable signals including a shock wave, light-beam cutoff, or a light burst, any of which can be measured to derive information on radon and progeny radioactivity levels in air or water.

Taleyarkhan, Rusi P.↗

Optimized thionin protects plants against bacterial infections

Two small proteins with anti-bacterial activity are generated and called optimized thionin and optimized pro-thionin. Optimized pro-thionin contains a signal sequence for intracellular trafficking of the protein and is cleaved off to yield optimized thionin. Genetically altered plants and their progeny expressing a polynucleotide encoding optimized pro-thionin or optimized thionin resist diseases caused by bacteria.

Stover, Eddie W.↗

Minimizing Backgrounds for the SuperCDMS SNOLAB Dark-Matter Experiment

Astronomical and cosmological observations indicate that large amounts of some slowly moving, unseen Dark Matter pervades the universe and outweighs normal matter by a factor of five. The Standard Model of Physics has no contender with the properties of this as-yet-undetected particle, so experimentalists build state-of-the-art radiation detectors to attempt to directly measure this Dark Matter. The Super Cryogenic Dark Matter Search (SuperCDMS) at Snolab is one such experiment, currently being constructed. This experiment uses ultra-cold, superconducting, high-purity silicon and germanium detectors to measure low-energy nuclear recoils from the elastic scattering of Dark Matter. I contributed to the calibration of the energy scale of low-energy nuclear recoils in CDMS II silicon detectors by computing an improved livetime correction for calibration data to verify the Monte Carlo rate normalization. Results indicate that the phonon collection efficiency of nuclear recoils relative to electron recoils is 95.2$^{+0.9}_{-0.7\%}$, and the ionization collection efficiency of low-energy nuclear recoils in silicon is lower than Lindhard prediction, consistent with other recent measurements. Backgrounds from the progeny decay of the abundant, naturally-occurring radioactive isotope radon-222 obstruct the sensitivity of essentially every dark-matter search. Radon concentrations in the Snolab cavern would contribute prohibitively large backgrounds if the volume surrounding the detectors were not purged with a low-flow low-radon gas. By measuring the radon diffusion and emanation, we identified acceptable gasket materials for sealing this radon purge, ensuring that the radon-induced backgrounds will be significantly lower than the other experimental backgrounds. A radon emanation system with a gas handling system and low-background radon detector was commissioned and used to measure the radon emanation of the proposed gaskets. A low-cost apparatus was constructed to measure the radon diffusion of gaskets with a commercial radon detector. The sensitivity of future generations of dark-matter detectors are expected to be dominated by long-lived low-energy beta- and alpha-emitting radon daughters such as 210 Pb on detector surfaces. I describe simulations indicating the detector could also be used to reduce background from material impurities plaguing rare-event searches, the commissioning of a prototype demonstration detector, and a gas handling system necessary to operate the detector. I demonstrated that the gas handling system reduces the otherwise dominant backgrounds by a factor of 62. This detector will therefore be able to detect 32 Si and 210 Pb 100 times better than currently available screeners.

Bowles, Michael A.↗

Automatic treatment of the variance estimation bias in TRIPOLI-4 criticality calculations

The central limit (CLT) theorem States conditions under which the mean of a sufficiently large number of independent random variables, each with finite mean and variance, will be approximately normally distributed. The use of Monte Carlo transport codes, such as Tripoli4, relies on those conditions. While these are verified in protection applications (the cycles provide independent measurements of fluxes and related quantities), the hypothesis of independent estimates/cycles is broken in criticality mode. Indeed the power iteration technique used in this mode couples a generation to its progeny. Often, after what is called 'source convergence' this coupling almost disappears (the solution is closed to equilibrium) but for loosely coupled systems, such as for PWR or large nuclear cores, the equilibrium is never found, or at least may take time to reach, and the variance estimation such as allowed by the CLT is under-evaluated. In this paper we first propose, by the mean of two different methods, to evaluate the typical correlation length, as measured in cycles number, and then use this information to diagnose correlation problems and to provide an improved variance estimation. Those two methods are based on Fourier spectral decomposition and on the lag k autocorrelation calculation. A theoretical modeling of the autocorrelation function, based on Gauss-Markov stochastic processes, will also be presented. Tests will be performed with Tripoli4 on a PWR pin cell. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Probability of initiation and extinction in the Mercury Monte Carlo code

A Monte Carlo method for computing the probability of initiation has previously been implemented in Mercury. Recently, a new method based on the probability of extinction has been implemented as well. The methods have similarities from counting progeny to cycling in time, but they also have differences such as population control and statistical uncertainty reporting. The two methods agree very well for several test problems. Since each method has advantages and disadvantages, we currently recommend that both methods are used to compute the probability of criticality. (authors)

97 MATHEMATICS AND COMPUTING↗

Critical Dose of Internal Organs Internal Exposure - 13471

The health threat posed by radionuclides has stimulated increased efforts to developed characterization on the biological behavior of radionuclides in humans in all ages. In an effort motivated largely by the Chernobyl nuclear accident, the International Commission on Radiological Protection (ICRP) is assembling a set of age specific biokinetic models for environmentally important radioelements. Radioactive substances in the air, mainly through the respiratory system and digestive tract, is inside the body. Radioactive substances are unevenly distributed in various organs and tissues. Therefore, the degree of damage will depend not only on the dose of radiation have but also on the critical organ, which is the most accumulation of radioactive substances, which leads to the defeat of the entire human body. The main objective of radiation protection, to avoid exceeding the maximum permissible doses of external and internal exposure of a person to prevent the physical and genetic damage people. The maximum tolerated dose (MTD) of radiation is called a dose of radiation a person in uniform getting her for 50 years does not cause changes in the health of the exposed individual and his progeny. The following classification of critical organs, depending on the category of exposure on their degree of sensitivity to radiation: First group: the whole body, gonads and red bone marrow; Second group: muscle, fat, liver, kidney, spleen, gastrointestinal tract, lungs and lens of the eye; The third group: bone, thyroid and skin; Fourth group: the hands, forearms, feet. MTD exposure whole body, gonads and bone marrow represent the maximum exposures (5 rem per year) experienced by people in their normal activities. The purpose of this article is intended dose received from various internal organs of the radionuclides that may enter the body by inhalation, and gastrointestinal tract. The biokinetic model describes the time dependent distribution and excretion of different radionuclides that have intake into the organism or absorbed into blood. Transport of different radionuclides between compartments is assumed to follow first order kinetics provided the concentration in red blood cells (RBCs) stays below a nonlinear threshold concentration. When the concentration in RBCs exceeds that threshold, the transfer rate from diffusible plasma to RBCs is assumed to decrease as the concentration in RBCs increases. For the calculations used capabilities AMBER by using the traces of radionuclides in the body. Model for the transfer of radionuclides in the body has been built on the basis of existing models at AMBER for lead. (authors)

61 RADIATION PROTECTION AND DOSIMETRY↗

Radioactive Water Treatment at a United States Environmental Protection Agency Superfund Site - 12322

A water treatment system at a United States Environmental Protection Agency (USEPA) Superfund site impacted by radiological contaminants is used to treat water entering the site. The United States Army Corps of Engineers (USACE) is actively managing the remedial action for the USEPA using contracts to support the multiple activities on site. The site is where former gas mantle production facilities operated around the turn of the century. The manufacturing facilities used thorium ores to develop the mantles and disposed of off-specification mantles and ore residuals in the surrounding areas. During Site remedial actions, both groundwater and surface water comes into contact with contaminated soils and must be collected and treated at an on-site treatment facility. The radionuclides thorium and radium with associated progeny are the main concern for treatment. Suspended solids, volatile organic compounds, and select metals are also monitored during water treatment. The water treatment process begins were water is pumped to a collection tank where debris and grit settle out. Stored water is pumped to a coagulant tank containing poly-aluminum chloride to collect dissolved solids. The water passes into a reaction tube where aspirated air is added or reagent added to remove Volatile Organic Compounds (VOC'S) by mass transfer and convert dissolved iron to a solid. The water enters the flocculent polymer tank to drop solids out. The flocculated water overflows to a fluidized bed contact chamber to increase precipitation. Flocculation is where colloids of material drop out of suspension and settle. The settled solids are periodically removed and disposed of as radioactive waste. The water is passed through filters and an ion exchange process to extract the radionuclides. Several million liters of water are processed each year from two water treatment plants servicing different areas of the remediation site. Ion exchange resin and filter material are periodically replaced and disposed of as radioactive waste. A total of 0.85 m{sup 3} of waste sludge per year requires disposal on average, in addition to another 6.6 m{sup 3} of waste cartridge filters. All water discharges are regulated by a state of New Jersey Pollutant Discharge Elimination System Permit implemented by the Federal Water Pollution Control Act (Clean Water Act). Laboratory analyses are required to satisfy requirements of the state NPDES permit. Specific monitoring parameters and discharge rates will be provided. Use of the water treatment systems drastically reduces the amount of contaminated water requiring solidification and water disposal to near zero. Millions of liters of potentially contaminated water from excavation activities is treated and released within permit limits. A small volume of solid radioactive waste (21 cubic meters) is generated annually from water treatment process operations. Management of ground and surface water is effectively controlled in remediation areas by the use of sumps, erosion control measures and pumping of water to storage vessels. Continued excavations can be made as water impacting the site is effectively controlled. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

A Comparison of Select USDOE and USEPA Risk and Dose Assessment Tools Utilized at Two FUSRAP Projects - 17388

The US Army Corps of Engineers (USACE) utilizes several computer programs and models to conduct risk and dose assessments at Formerly Utilized Sites Remedial Action Program (FUSRAP) projects. In the past, the USACE has primarily relied on the US Department of Energy (USDOE)'s Argonne National Lab (ANL) RESidual Radioactivity (RESRAD) computer code for performing dose and risk assessments involving radiological contamination in onsite soils and the US Environmental Protection Agency (USEPA) Preliminary Remediation Goal (PRG) and Dose Compliance Calculator (DCC) for radiological contamination in ground water. Recent USEPA guidance requires use of USEPA calculators for all media at National Priority List sites, which includes some FUSRAP sites. The USACE recently utilized both RESRAD and the USEPA PRG and DCC calculators in assessments at two FUSRAP projects for all media in order to evaluate differences in the models and determine adjustments to potentially resolve differences. The two projects involve soil and groundwater assessments and address typical FUSRAP contaminants such as uranium, radium, thorium and their progeny. This paper discusses differences between the models, lessons learned, and methods used to address stakeholder and other concerns regarding these assessments. The paper's discussions are useful for anyone performing risk or dose assessments for radiological contamination and especially those using RESRAD and the PRG and DCC calculators. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Considerations and Lessons Learned from the Use of Gamma Spectroscopy Systems at FUSRAP Project Sites - 17459

This paper will discuss the application of gamma spectroscopy systems for analysis of environmental media samples for parents and daughter progeny of the Natural Uranium and Thorium Decay Series radionuclides. The concentrations and relative ratios of naturally occurring isotopes are used to confirm the presence of FUSRAP-related wastes and for understanding the associated potential dose and health risks. Focus will be given to lessons learned from the set-up and operation of onsite gamma spectroscopy laboratories used to provide stakeholders with defensible and timely results to support FUSRAP site investigations and remediation including adaptive survey design implementation, physical remediation and waste transport, and confirmatory final status survey activities. This paper focuses on the potential impacts to gamma spectroscopy measurement accuracy from the following: - Bias caused by sample matrix effects as well as use of different library reference values between performance evaluation study providers and testing laboratories; - Use of calibration sources with limited energy ranges, and; - Selection of available alternative isotopic decay reference data for the input of line energies and their intensities. These lessons learned include discussing how inter-laboratory measurement differences from blind performance evaluation samples are affected by the manufacturer's measurement method, including equilibrium assumptions; the isotope decay information source library used by the study provider and participating laboratories; and calibration source geometry/density variances from actual sample conditions. Any of these factors can significantly impact the accuracy of reported results data. Deepening the reader's understanding of the various factors that impact the accuracy, interpretation, and overall usability of gamma spectroscopy results data from laboratories will help ensure defensible decision-making and cost-effective mission implementation within FUSRAP and similar remediation programs. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Ra-226: An Inter-Method Comparison - 15447

Radium is an element which can be found naturally at low levels in the environment (water, rock, soil) as well as due to impact from man. It is known to cause cancer, primarily through ingestion and inhalation, and is considered one of the main radioactive environmental concerns. Sources of ingestion include food and drinking water, while sources of inhalation include emissions from the burning of coal or other fuels as well as dust generated from the uranium or phosphate mining industries. Radium is generally present in relatively low levels in the environment, but certain geographic formations containing elevated concentrations of radium exist throughout the world. In addition, there are sites which are considered contaminated by prior industrial activity. Radium's most prevalent isotopes are Ra-224, Ra-226, and Ra-228. Ra-226, a member of the U-238 decay series with a half-life of 1600 years, is the most common radium isotope. Several methods exist for analysis of this isotope, some targeting measurement of this radionuclide's alpha emission (or those of its decay progeny), others focused on the accompanying gamma-ray emissions. The choice of analytical method to utilize is dependent upon various factors. The purpose of this discussion is to identify various methods, highlighting strengths and weaknesses of each to assist in determining the most advantageous method to utilize, and to compare results obtained from each method. (authors)

54 ENVIRONMENTAL SCIENCES↗

Comparison of Laboratory Analytical Methods for Uranium Analysis Superior Steel FUSRAP Site - 16606

The Superior Steel Site processed uranium metal in support of the Atomic Energy Commission's fuel-element development program in the 1950's, and was subsequently classified as a Formerly Utilized Sites Remedial Action Program (FUSRAP) Site. Previous investigations at the site identified uranium contamination both inside and outside the buildings associated with historic uranium metalworking activities. The U.S. Army Corps of Engineers (USACE) is currently engaged in the Remedial Investigation (RI) phase in accordance with the Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) of 1980, as amended. As part of the RI, gamma spectroscopy analysis of environmental samples was performed on-site using a laboratory-grade, high-purity germanium (HPGe) spectrometer. The gamma spectroscopy analysis included isotopes of uranium and their progeny. As a quality assurance measure, a subset of samples already analyzed on-site were sent to a certified, commercial, off-site laboratory for analysis using a suite of analytical methods including gamma spectroscopy, alpha spectroscopy, and mass spectroscopy. As an element of the quality assurance program implemented for the RI, an assessment of the correlations between the various analytical methods employed by both the on-site and off-site laboratory was performed. This assessment revealed inconsistencies between on-site and off-site gamma spectroscopy analytical results, which raised concerns about the appropriateness and suitability of the analytical data. To resolve the data quality concerns and better understand the source(s) of analytical results variability, the Superior Steel RI team (USACE together with its contractor, Amec Foster Wheeler) developed a quality control test whose design objective was to control or practically eliminate sampling and sample preparation variability in order to focus more clearly on analytical variability. This paper discusses the results of this supplemental quality control test, showing the differences in the various analytical methods (both on-site and off-site). It demonstrates in a practical and real world setting how sample preparation and analytical variability, if not controlled and understood can impact data quality and data defensibility. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

MCNP 6.2.0 Delayed-Particle Production Improvements

Development began on a delayed-particle physics package for the Monte Carlo Radiation transport code MCNPX in 2004 incorporating the CINDER90 depletion code and delayed particle libraries. When MCNP5 was merged with MCNPX to form MCNP6 in 2010, this delayed-particle capability was passed on and has been continuously improved in subsequent versions of MCNP6. Today, the delayed-particle feature in MCNP6 allows for the production of delayed neutrons, gammas, betas, and alpha particles. Future development includes the addition of delayed-positron production in the next release of MCNP6. Delayed particles can be sampled with MCNP using the ACT card in conjunction with the FISSION and NONFISS keywords. The user can specify one or more of the four available delayed-particle types mentioned above on one or both of the FISSION and NONFISS keywords. If a delayed-particle type is selected on the FISSION keyword, then delayed production of that particle from fission products and their progeny will be produced. Likewise, if a delayed-particle type is selected on the NONFISS keyword then delayed production of that particle from non-fission interactions and spontaneous decay will be produced. In some cases, the sheer number of delayed particles that can be produced from nuclear reactions and spontaneous decay (i.e. hundreds of delayed gamma lines when spontaneous fission is possible) can make it difficult to achieve converged solutions in an efficient and timely manner. Truncation methods are the simplest form of variance reduction and can be used to decrease convergence times by limiting calculations to the phase space of interest. This paper introduces several such truncation methods that allow the user to restrict the number of possible delayed particles available for sampling to only those of interest in the problem. It is important to stress that the use of any truncation method should be verified by first assessing the impact of the truncated particles (i.e. by disabling the truncation) for one or more baseline cases. In addition to these new methods, a new delayed-gamma sampling algorithm implemented in MCNP 6.2.0 is introduced. Comparisons to ENDF data and analytical benchmarking with the new algorithm show a substantial improvement in accuracy over previous versions. New improvements to the delayed-particle capability have been added to MCNP 6.2.0. These improvements include an updated treatment of the THRESH keyword which omits delayed-particle lines below a set amplitude, and addition of the PECUT and HLCUT keywords which allow the user to truncate delayed-particles lines based on energy and half-life, respectively. The delayed-gamma sampling algorithm has also been improved to allow exact energy sampling. Comparisons of MCNP calculations directly to ENDF data and analytical benchmarks have verified the significant improvement in the new delayed gamma sampling algorithm. (authors)

97 MATHEMATICS AND COMPUTING↗

Neutron Number Probability Distributions in a Subcritical System Using the Forward Master Equation

The subject of this paper is the determination of the equilibrium probability distribution function (PDF) of the neutron population within a subcritical multiplying system in the presence of an intrinsic random source as a result of spontaneous fission (SF). Such systems are strongly stochastic and low order moments such as the mean and variance of the neutron number are not sufficient to characterize the true state of the neutron population. We base our work on the forward Master equation in a lumped model formulation for P{sub n} (t), n = 0, 1, 2,..., the probability of there existing η neutrons at time t and obtain solutions for the steady state distributions. The key parameters in this model, neutron lifetime and fission probability, are rigorously obtained by numerically solving the k-eigenvalue problem in a one-dimensional spherical system and using standard definitions of lumped parameters in terms of production and loss rates in finite systems. Previous work has examined single-chain PDFs (a single fission and the resulting progeny) for neutrons, uncoupled neutron-photon single-chain PDFs, both using a lumped backward Master equation formulation, as well as neutron PDFs in supercritical systems. In this paper, we analyze strictly subcritical systems, for which we compare analytically derived solutions with numerical computations for different multiplicity distribution models. For subcritical systems where the neutron population remains finite at steady state, we show that the forward Master equation can be very efficiently solved numerically to obtain the equilibrium distributions. Finally, this work is motivated by potential application to passive interrogation for detection of diverted nuclear materials as well to criticality safety. The equilibrium neutron number probability distribution in subcritical systems has been numerically investigated for several models of the induced and spontaneous fission multiplicity distribution. A well known approximate but closed form solution, namely the quadratic model, was shown to be unacceptably accurate for subcritical media. The matrix inversion and the recursion methods agree well and were benchmarked with the binary fission model, but the recursion formulation proves far more computationally efficient. A qualitative change in the shape of the neutron PDF is observed for increasing source strength, as expected, and a transition from a stochastic to a deterministic system is expected for a sufficiently strong source. We are currently extending this approach to obtain the equilibrium joint distribution of neutrons within the system and those that have leaked, to explicitly represent the neutron PDF as observed by an external detector. (authors)

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗