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At least 361 records · Page 20

Experimental study of extended timescale dynamics of a plasma wakefield driven by a self-modulated proton bunch

Plasma wakefield dynamics over timescales up to 800 ps, approximately 100 plasma periods, are studied experimentally at the Advanced Wakefield Experiment (AWAKE). The development of the longitudinal wakefield amplitude driven by a self-modulated proton bunch is measured using the external injection of witness electrons that sample the fields. In simulation, resonant excitation of the wakefield causes plasma electron trajectory crossing, resulting in the development of a potential outside the plasma boundary as electrons are transversely ejected. Trends consistent with the presence of this potential are experimentally measured and their dependence on wakefield amplitude are studied via seed laser timing scans and electron injection delay scans.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

RHOD Site - NOAA PSL Wind Retrievals WINDoe / Derived Data

This dataset contains daily NetCDF files with horizontal wind profiles retrieved with the WINDoe retrieval (Gebauer and Bell 2024) at Rhode Island (RHOD). WINDoe retrievals datasets are also available at Nantucket Island (NANT, nant.windoe.z01.c1) and Block Island (BLOC, bloc.windoe.z01.c1). WINDoe is an optimal estimation algorithm to retrieve wind profiles combining multiple instruments. The code is available in this github repository (https://github.com/OAR-atmospheric-observations/WINDoe/tree/main) and the retrieval is described by Gebauer and Bell (2024). WINDoe allows combining the individual datasets and outputs into one profile taking into account the information and uncertainties of each dataset. The use of WINDoe minimizes data gaps and maximizes data availability, compared to using wind profiles from only one of the instruments. The regular height grid eases comparisons to numerical weather prediction models. Code modifications have been made that include reading in WFIP3 specific instruments, averaging Doppler lidar radial velocities at various azimuth angles to avoid overfitting, and allowing the user to define a height grid by the user in the vipfile. The instruments used as input to the retrieval are a radar wind profiler (low- and high resolution mode) providing data in and above the boundary layer, a scanning Doppler lidar usually providing data throughout the boundary layer, a profiling lidar providing data from 50 to 200 m at BLOC and NANT, and from 10 to 280 m at Rhode Island, and a surface tower (4 m at NANT and RHOD and 10 m at BLOC). From the scanning lidars, we used radial velocity measurements at 60 deg elevation angle at six different azimuth angles with a resolution of approximately 30 m along the line of sight and the lowest range gate at approximately 70 m. The wind profiles are retrieved with WINDoe up to 3.74 km with 10 m vertical resolution. The profiles are retrieved every 15 min at BLOC and NANT and every 60 min at RHOD.

17 WIND ENERGY↗

BLOC Site - NOAA PSL Wind Retrievals WINDoe / Derived Data

This dataset contains daily netcdf files with horizontal wind profiles retrieved with the WINDoe retrieval (Gebauer and Bell 2024) at Block Island (BLOC). WINDoe retrievals datasets are also available at Nantucket Island (NANT, nant.windoe.z01.c1) and Rhode Island (RHOD, rhod.windoe.z01.c1). WINDoe is an optimal estimation algorithm to retrieve wind profiles combining multiple instruments. The code is available in this github repository (https://github.com/OAR-atmospheric-observations/WINDoe/tree/main), and the retrieval is described by Gebauer and Bell (2024). WINDoe allows combining the individual datasets and outputs into one profile taking into account the information and uncertainties of each dataset. The use of WINDoe minimizes data gaps and maximizes data availability, compared to using wind profiles from only one of the instruments. The regular height grid eases comparisons to numerical weather prediction models. Code modifications have been made that include reading in WFIP3 specific instruments, averaging Doppler lidar radial velocities at various azimuth angles to avoid overfitting, and allowing the user to define a height grid by the user in the vipfile. The instruments used as input to the retrieval are a radar wind profiler (low- and high resolution mode) providing data in and above the boundary layer, a scanning Doppler lidar usually providing data throughout the boundary layer, a profiling lidar providing data from 50 to 200 m at BLOC and NANT, and from 10 to 280 m at Rhode Island, and a surface tower (4 m at NANT and RHOD and 10 m at BLOC). From the scanning lidars, we used radial velocity measurements at 60 deg elevation angle at six different azimuth angles with a resolution of approximately 30 m along the line of sight and the lowest range gate at approximately 70 m. The wind profiles are retrieved with WINDoe up to 3.74 km with 10 m vertical resolution. The profiles are retrieved every 15 min at BLOC and NANT and every 60 min at RHOD.

17 WIND ENERGY↗

NANT Site - NOAA PSL Wind Retrievals WINDoe / Derived Data

This dataset contains daily NetCDF files with horizontal wind profiles retrieved with the WINDoe retrieval (Gebauer and Bell 2024) at Nantucket Island (NANT). WINDoe retrievals datasets are also available at Block Island (BLOC, bloc.windoe.z01.c1) and Rhode Island (RHOD, rhod.windoe.z01.c1). WINDoe is an optimal estimation algorithm to retrieve wind profiles combining multiple instruments. The code is available in this github repository (https://github.com/OAR-atmospheric-observations/WINDoe/tree/main), and the retrieval is described by Gebauer and Bell (2024). WINDoe allows combining the individual datasets and outputs into one profile taking into account the information and uncertainties of each dataset. The use of WINDoe minimizes data gaps and maximizes data availability, compared to using wind profiles from only one of the instruments. The regular height grid eases comparisons to numerical weather prediction models. Code modifications have been made that include reading in WFIP3 specific instruments, averaging Doppler lidar radial velocities at various azimuth angles to avoid overfitting, and allowing the user to define a height grid by the user in the vipfile. The instruments used as input to the retrieval are a radar wind profiler (low- and high resolution mode) providing data in and above the boundary layer, a scanning Doppler lidar usually providing data throughout the boundary layer, a profiling lidar providing data from 50 to 200 m at BLOC and NANT, and from 10 to 280 m at Rhode Island, and a surface tower (4 m at NANT and RHOD and 10 m at BLOC). From the scanning lidars, we used radial velocity measurements at 60 deg elevation angle at six different azimuth angles with a resolution of approximately 30 m along the line of sight and the lowest range gate at approximately 70 m. The wind profiles are retrieved with WINDoe up to 3.74 km with 10 m vertical resolution. The profiles are retrieved every 15 min at BLOC and NANT and every 60 min at RHOD.

17 WIND ENERGY↗

Experimental Measurements of Soot and Soot Precursors of Sustainable Aviation Fuels

Sustainable Aviation Fuels (SAFs) are promising for decarbonizing the challenging-to-electrify aerospace sector and reducing yearly greenhouse gas emissions by thousands of tons. Developing predictive detailed chemical kinetic models for SAF (and traditional) fuel mixtures necessitates a robust experimental database to elucidate the intricate pyrolysis and oxidation chemistry of SAF fuel blend components. Two critical components of SAF surrogate mixtures are iso-dodecane isomers and trans-decalin. This report characterizes the structure of three slightly sooting, laminar, non-premixed, nitrogen-diluted Planar Mixing Layer Flames (PMLFs) fueled by either pure ethylene, ethylene doped with 1500ppm of either 2,2,4,6,6-pentamethyl-heptane or trans-decalin. The flames have the same stoichiometric mixture fraction and total mole fraction of fuels in the fuel stream (X F,F = X C2H4,F + X Dopant,F = 0.26), resulting in approximately the same maximum temperature (T max ≈ 1800 K) to highlight the effect of doping on soot and its gaseous precursors. The PMLF is unconfined and established between adjacent planar jets of the fuel and oxidizer streams surrounded by annular shielding nitrogen. The flow is stabilized by exhausting the hot buoyant flame products through a slot in a downstream plate onto which the cold flow impinges. Importantly, any horizontal cross-section of the PMLF has a self-similar thermochemical structure of a reactive boundary layer that grows at increasing Height Above the Burner (HAB). Therefore, the horizontal cross-sections of a PMLF can be modeled as a One-Dimensional Counterflow Flame (1D-CF) with very low strain rates which are unachievable in traditional CFs and yield a structure that is several millimeters thick. In brief, the PMLF is ideal for performing spatially resolved measurements with minimal effects of the sampling-induced perturbations, to develop and validate detailed chemical kinetic models on time scales of a few tens of milliseconds that are relevant in aviation applications. The horizontal profiles of C0-C18 gaseous species at HAB = 50 mm and soot volume fraction at 25 and 50 mm are measured using capillary sampling followed by GC-MS analyses and Laser Induced Emission Spectroscopy (LIES), respectively. Additionally, the Elastic Laser Light Scattering (E-LLS) coefficient is measured at HAB = 50 mm and 25 mm to determine the strain rates of the 1D-CFs equivalent to the characterized PMLF horizontal cross sections and the profile of the E-LLS equivalent diameter of soot. The comparison of the results in the base PMLF fueled only by ethylene with those in either doped PMLF in which 1500 ppm of ethylene are replaced with 2,2,4,6,6-pentamethyl-heptane or trans-decalin, reveals that the doping increases the mole fraction of several Polycyclic Aromatic Hydrocarbons (PAHs) at both HABs by a factor of approximately 2.5, and the soot volume fraction at both HABs by factors of ~1.5 for 2,2,4,6,6-pentamethyl-heptane and ~1.25 for trans-decalin doping, respectively. Conversely, doping causes a near doubling of the soot equivalent diameter only at HAB = 50 mm, without significant effects at 25 mm. The experimental results partially validate the tested state-of-the-art detailed chemical kinetic model and also point toward the further improvement of its predictive capabilities.

10 SYNTHETIC FUELS↗

Fracture behavior of irradiation induced nanocrystalline UO 2 studied by in-situ mechanical testing in transmission electron microscopy

Uranium Dioxide (UO 2 ) is widely used as a fuel in current light water reactors (LWRs). Upon accumulation of radiation damage, LWR UO 2 fuel pellets start to develop a different microstructure at the pellet periphery when fuel burnup exceeds 45–50 GWd/tHM. The resulting porous, nanocrystalline microstructure is one of the most prominent microstructural changes occurring in such fuel. Its fracture mechanisms, which causes fuel fine fragmentation, could impact safety limits when the cladding breaches. Direct measurements of these properties are challenging, therefore a surrogate obtained via ion irradiation can be used. In this study, multiple microcantilevers were fabricated by focused ion beam from both fresh UO 2 and UO 2 irradiated with 84 MeV Xe 26+ ions to a peak dose of 1357 displacements per atom (dpa). Further, the irradiation produced a pseudo high burnup structure approximately 2 µm below the surface. In-situ nano-mechanical bending tests were conducted to investigate the fracture behavior and the effect of the surrogate UO 2 high burnup structure on local fracture properties. Fresh UO 2 fuel was observed to fracture in transgranular mode without nucleation or movement of dislocations. However, the Xe-irradiated nanocrystalline microcantilevers fractured along the grain boundaries, with no influence from the pre-existing micro-cracks in the microcantilever. Fracture toughness for this type of surrogate high burnup UO 2 structure is reported for the first time in literature. Both the fracture stress and toughness show degradation for UO 2 as a result of Xe-irradiation.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Extension of the PINN diffusion model to k-eigenvalue problems

This paper extends our recent work on the Physics-Informed Neural Networks (PINN) approach for the fixed source diffusion models and applies it to the diffusion theory based k-eigenvalue problems. To make the PINN equitable for the eigenvalue problems, we introduce a novel integral regularization term to the loss function in the framework, and allow the direct inference of the principal eigenvalue and the associated eigenfunction. The regularization term enforces a pre-defined value on the integration of the model predictions, and this value can be directly related to a physical property of the system. We also introduce an additional learnable parameter to approximate the principal eigenvalue. As a proof of principle, we solve the one-group two-dimensional k-eigenvalue neutron diffusion equation in this work. We then provide two numerical examples to demonstrate the applicability of the PINN approach. In each example, we solve the k-eigenvalue diffusion equation in a multi-region configuration constrained with a set of Robin boundary conditions for generality. We use a FEM solution based on the power-iteration method to verify the results of the PINN solution. The results showed relative percentage error in the predicted eigenvalue of about 0.77% and about 1.2% for example 1 and example 2, respectively. The mean absolute error in the predicted flux for example 1 is ∼ 0.002 and for example 2 is ∼ 0.0024. These results indicate some preliminary successes of the PINN application to k-eigenvalue problems. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Report on FY 2021 testing in support of integrating Alloy 800H and 2.25Cr-1Mo for EPP analysis

The use of simplified Elastic-Perfectly Plastic (EPP) design methods avoids the complexities and limitations of the elastic analysis approach in evaluating strain limits and creep-fatigue damage for Class A metallic coolant boundary components in ASME Boiler and Pressure Vessel Code, Section III, Division 5, Subsection HB, Subpart B. No stress classification and linearization are required in the EPP methods. Further, the strain limits and creep-fatigue damage evaluation procedures based on elastic analysis results were developed for the reactor operating conditions where uncoupled, rate-independent plasticity and stationary creep can be used to approximate the deformation in the component adequately. But at very high temperatures, the deformation is rate-dependent, and it can only be approximated adequately by unified viscoplastic model. Thus, for example, the elastic analysis approach cannot be used to evaluate strain limits and creep-fatigue damage for Alloy 617 above 650 °C. The EPP methods remove the temperature restriction. They can be used to evaluate strain limits and creep-fatigue damage for the full range of temperatures.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Gas and dust dynamics in γ Cephei-type disks

Context. Giant planets are observed orbiting the primary stars of close binary systems. Such planets may have formed in compact circumprimary disks, which once surrounded these stars, under conditions much different than those encountered around single stars. Aims. In order to quantify the effects of the strong gravitational perturbations exerted on circumprimary disk material, the three-dimensional (3D) dynamics of gas and dust in orbit around the primary star of a compact and eccentric binary system was modeled by applying the stellar and orbital parameters of γ Cephei, a well-known system that can be representative of a class of close binaries. Methods. Circumprimary gas was approximated as an Eulerian viscous and compressible fluid and modeled by means of 3D hydrodynamical simulations, assuming locally isothermal conditions in the medium around the primary star. Dust grains were modeled as Lagrangean particles, subjected to gravity and aerodynamic drag forces. Models that include a giant planet were also considered. Results. Models indicate that spiral density waves excited around pericenter passage propagate toward the inner boundary of the disk, through at least a few pressure scale-heights from the mid-plane, inducing radial and vertical mixing in the gas. However, perturbations imparted to gas, both in terms of eccentricity and precession, are far weaker than previously estimated by two-dimensional (2D) simulations. Models predict small eccentricities, ≲0.03, and slow retrograde precession. The addition of a giant planet does not change the low eccentricity state of the disk. The parameters applied to the disk would lead to the formation of a massive planet, many times the mass of Jupiter, in agreement with some observations. Micron to mm-size dust grains are well coupled to the gas, resulting in similar dynamics and statistically similar distributions of orbital elements. The planet only affects the dust distributions locally. In agreement with outcomes of recent 2D models, the lifetime of an isolated circumprimary disk would be brief, ~10 5 years, because of its compact nature, requiring a long-term external supply of mass to allow for the in situ formation of a giant planet.

79 ASTRONOMY AND ASTROPHYSICS↗

Utah FORGE Phase 3 Native State Model: 2022 Update

This is the Phase 3 native state model update. The Phase 3 numerical model represents a significant subsurface volume below the FORGE site footprint. The model domain of 4.0 km x 4.0 km x 4.2 km is located approximately between depths of 4000 to 4200 meters below land surface. This data archive consists of 10 files, 4 of which are simulation input files and the remaining 6 are simulation output files. There is an included readme.txt file that contains details on each of the data files. The input files include meshes, FALCON code inputs, tabulated data of water properties, temperature values, and model boundaries. The output files include simulation outfiles and point data of modeled material properties.

15 GEOTHERMAL ENERGY↗

Implementation of a Three-Dimensional Planetary Boundary Layer Parameterization in a Coupled Modeling System and Evaluation of "Gray Zone" Simulations of a Wind-Wave Event Off the US California Coast Using Observations

A three-dimensional (3D) planetary boundary layer (PBL) parameterization was added to the Coupled Ocean Atmosphere Wave Sediment Transport (COAWST) model and the first coupled atmosphere/wave "gray zone" simulations were carried out using the 3D PBL parameterization. A case study of a significant wind-wave event from 4-8 November 2020 off the US west coast was examined, with a focus on the impacts of the event within an approximate 280x280 km central California coastal region covering the Bureau of Ocean Energy Management Morro Bay wind energy lease area. Simulations with both one-dimensional (1D; Yonsei University) and 3D PBL parameterizations were examined in this nest with ..delta..x=400 m. Two-way coupling was active, with near-surface winds feeding back to the wave model and bulk wave statistics feeding back to the atmospheric model. Both simulations compared favorably with buoy observations in capturing the timing and magnitude of wind speed, temperature, dewpoint, and significant wave height, as the front associated with the maritime weather system moved southward across coastal California. However, wind speed errors over land were larger. Time series of the vertical profile of winds below z=250 m from the simulations compared favorably with observations from the US Dept. of Energy Morro Bay Doppler lidar buoy. Differences between the coupled 1D and 3D PBL simulations were minor. The most notable difference was that the simulation using the 3D PBL parameterization had approximately 10 % weaker winds at the peak of the event causing 10 % lower significant wave heights. This difference was shown to be mostly due to differences in the vertical mixing treatment between the parameterizations, in particular the nonlocal downward mixing of higher momentum air in the 1D Yonsei University parameterization in convective conditions. Overall, this work demonstrates that the 3D PBL parameterization can be used in a coupled atmosphere/wave modeling framework with similar behaviors as traditional PBL parameterizations that do not provide horizontal turbulent variances and fluxes.

16 TIDAL AND WAVE POWER↗

A comprehensive analysis of the crop effect on the urban-rural differences in land surface phenology

The response of land surface phenology (LSP) to the urban heat island effect (UHI) is a useful biological indicator for understanding how vegetated ecosystems will be affected by future climate warming. However, vegetation cover in rural areas is often dominated by cultivated land, whose phenological timing is considerably influenced by agricultural managements (e.g., timing of sowing and harvesting), leading to biased conclusions derived from the urban-rural LSP differences. To demonstrate this problem, we investigated the crop influence on the phenological response to a warmer environment resulting from the UHI effect. We partitioned cities in the United States into cultivated and non-cultivated categories according to the proportion of crops in rural areas. We then built continuous buffer zones starting from the urban boundary to explore the urban-rural LSP differences considering the UHI effect on them. In this work, the results suggest crop inclusion is likely to lead to >14 days of urban-rural differences at both the start of the season (SOS) and the end of the season (EOS) between cultivated and non-cultivated cities. The temperature sensitivity (ST) of SOS is overestimated by approximately 2.7 days/°C, whereas the EOS is underestimated by 3.6 days/°C. Removing crop-dominated pixels (i.e., above 50 %) can minimize the influence of crop planting/harvesting on LSP and derive reliable results. We, therefore, suggest explicit consideration of crop impacts in future studies of phenological differences between urban and rural areas and the UHI effect on LSP in urban domains, as presented by this comprehensive study.

54 ENVIRONMENTAL SCIENCES↗

Learning the structure of wind: A data-driven nonlocal turbulence model for the atmospheric boundary layer

In this work, we develop a novel data-driven approach to modeling the atmospheric boundary layer. This approach leads to a nonlocal, anisotropic synthetic turbulence model which we refer to as the deep rapid distortion (DRD) model. Our approach relies on an operator regression problem that characterizes the best fitting candidate in a general family of nonlocal covariance kernels parameterized in part by a neural network. This family of covariance kernels is expressed in Fourier space and is obtained from approximate solutions to the Navier–Stokes equations at very high Reynolds numbers. Each member of the family incorporates important physical properties such as mass conservation and a realistic energy cascade. The DRD model can be calibrated with noisy data from field experiments. After calibration, the model can be used to generate synthetic turbulent velocity fields. To this end, we provide a new numerical method based on domain decomposition which delivers scalable, memory-efficient turbulence generation with the DRD model as well as others. We demonstrate the robustness of our approach with both filtered and noisy data coming from the 1968 Air Force Cambridge Research Laboratory Kansas experiments. Using these data, we witness exceptional accuracy with the DRD model, especially when compared to the International Electrotechnical Commission standard.

17 WIND ENERGY↗

A vortex sheet based analytical model of the curled wake behind yawed wind turbines

Motivated by the need for compact descriptions of the evolution of non-classical wakes behind yawed wind turbines, we develop an analytical model to predict the shape of curled wakes. Interest in such modelling arises due to the potential of wake steering as a strategy for mitigating power reduction and unsteady loading of downstream turbines in wind farms. We first estimate the distribution of the shed vorticity at the wake edge due to both yaw offset and rotating blades. By considering the wake edge as an ideally thin vortex sheet, we describe its evolution in time moving with the flow. Vortex sheet equations are solved using a power series expansion method, and an approximate solution for the wake shape is obtained. The vortex sheet time evolution is then mapped into a spatial evolution by using a convection velocity. Apart from the wake shape, the lateral deflection of the wake including ground effects is modelled. Our results show that there exists a universal solution for the shape of curled wakes if suitable dimensionless variables are employed. For the case of turbulent boundary layer inflow, the decay of vortex sheet circulation due to turbulent diffusion is included. Finally, we modify the Gaussian wake model by incorporating the predicted shape and deflection of the curled wake, so that we can calculate the wake profiles behind yawed turbines. Model predictions are validated against large-eddy simulations and laboratory experiments for turbines with various operating conditions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The effect of triangularity on predicted pedestals for the CFETR

In this work, the dominant unstable magnetohydrodynamic mode and its stable region in the pedestal of the China Fusion Engineering Test Reactor are studied by numerical modeling with the peeling-ballooning theory over a wide range of triangularities (δ) and collisionalities (υ*). A new accessible stable region is found at δ<−0.1 for large βN,ped and υ*. This new stable region expands toward lower βN,ped and υ* with decreasing δ and is totally covered by the peeling unstable region with δ=−0.5 because of the increasing trapped particle fraction (ft,eff). The sensitivity of this new stable region to the kinetic ballooning mode constraint and elongation is studied. For negative and low δ<0.1, the boundary of the first stable region is determined from the ballooning mode. For δ>0.1, the peeling mode becomes dominant as the boundary approaches low s with low υ*, while the ballooning mode is still dominant at the boundary with high υ*. When δ increases beyond 0.46, the first stable region is expanded, and access to the second stable region of the ballooning mode opens up. The entire newly connected region of the first and second stable regions keeps expanding with further increases in δ until δ=0.6. Beyond this value, the ballooning mode becomes more unstable with increasing δ, while the peeling mode is approximately unchanged with increasing δ in this range. The change in the dominant mode and the stable region with increasing δ can be explained by the trade-off between the stabilization effect from the deeper poloidal magnetic well and destabilization due to the enlarged drive term.

Physics↗

Fluctuations and correlations of baryonic chiral partners

The exploration of critical phenomena in phase transitions of strongly interacting matter governed by quantum chromodynamics (QCD) is one of the goals of present ultrarelativistic heavy-ion collision experiments at BNL and CERN. The key research direction is to locate the putative critical point on the phase diagram of QCD linked to the chiral symmetry restoration at finite temperature and/or density. One of the main theoretical tools used for this purpose is the fluctuations of conserved charges, such as the net-baryon number. However, due to experimental limitations, analyses of heavy-ion collision data suffer from a very doubtful basing of the net-proton number being a proxy for the total net-baryon number fluctuations. In this work, we use the parity doublet model to investigate the fluctuations of the net-baryon number density in hot and dense hadronic matter. The model accounts for chiral criticality within the mean-field approximation. We focus on the qualitative properties and systematics of the first- and second-order susceptibility of the net-baryon number density, and their ratios for nucleons of positive and negative parity, as well as their correlator. We show that the fluctuations of the positive-parity nucleon do not necessarily reflect the fluctuations of the total net-baryon number density at the phase boundary of the chiral phase transition. We also investigate the nontrivial structure of the correlator. Furthermore, we discuss and quantify the differences between the fluctuations of the net-baryon number density in the vicinity of the chiral and liquid-gas phase transition in nuclear matter. We indicate a possible relevance of our results with the interpretation of the experimental data on net-proton number fluctuations in heavy-ion collisions. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Horizontal transfer of chromosomal DNA mediated by an integrative and conjugative element generates frequent localized recombination in Novosphingobium aromaticivorans

Horizontal gene transfer is an important evolutionary process by which DNA is exchanged between cells that are physically co-located but not direct evolutionary descendants. Horizontal transfer of highly divergent DNA is relatively easy to detect and can produce major phenotypic changes, exemplified by the acquisition of antibiotic resistance determinants. However, transfer of high-identity DNA, for example, between strains of the same species, is likely to be more frequent, harder to detect, and highly impactful in aggregate. In this work, we demonstrate that soil isolates of the alphaproteobacterium Novosphingobium aromaticivorans can exchange chromosomal DNA, leading to multiple unselected recombination events spanning approximately 10% of the chromosome. Chromosomal recombination was directional and more efficient near an integrative and conjugative element (ICE), and required a relaxase found in the ICE. Recombination could not be observed in strains from closely related Novosphingobium species. In combination, these results suggest that ICE-mediated recombination can efficiently recombine DNA within N. aromaticivorans, increasing the adaptive potential of the species while also enforcing species boundaries through preferential intraspecific recombination.

Allemann, Marco [ORNL]↗

Pipeline Hydrogen Decarbonization and Repurposing Analyzers (P-HyDRAs)

The Pipeline Hydrogen Decarbonization and Repurposing Analyzers (P-HyDRAs) are a set of prototype computational tools for simulating and optimizing midstream natural gas pipeline system operations subject to location and time-dependent hydrogen blending. The models can accurately resolve dynamic gas flows through large-scale pipeline networks using non-ideal gas equations of state. The codes can be used as decision support for planning and design decisions involving intra-day energy flow schedules as well as spatiotemporal economic values of natural gas, hydrogen, and net energy delivered to consumers while ensuring that pipeline hydraulic limitations, gas compressor station constraints, operational factors, and pre-existing shipping contracts are satisfied. The inputs to the codes are a model of the pipeline system as well as time-series data that specify boundary conditions on the network. For optimization, the code module requires price and quantity offers for natural gas and hydrogen and price and quantity bids for energy, which are used as time-dependent constraints in an optimal control problem. The outputs are time-series data that provide a predictive simulation of gas flows, mass fractions, and pressures, or with additional degrees of freedom give an approximately optimal solution for gas injections/withdrawals, compressor settings, and sensitivities to the objective function that provide locational values of energy.

Zlotnik, Anatoly↗