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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 37 records · Page 2
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Hole formation effect on surface morphological response of plasma-facing tungsten

We report simulation results on the effect of helium (He) bubble bursting-mediated surface hole formation on the surface morphological response of tungsten plasma-facing components (PFCs) in nuclear fusion devices. Our analysis is based on an atomistically informed, continuum-scale model, which is capable of accessing the spatiotemporal scales relevant to the fuzz nanostructure formation process on the surface of PFC tungsten. Our simulations account, in an empirical fashion, for two types of subsurface bubble dynamical phenomena in the nanobubble region of PFC tungsten during He plasma irradiation, involving bubble bursting and surface crater formation. We demonstrate that the hole formation effect on the PFC tungsten surface accelerates the growth rate of nanotendrils and the onset of fuzz formation. As a result, the predicted incubation time for surface nanotendril growth is shortened, in agreement with experimental data of incubation fluence at comparable plasma exposure conditions. We also explore systematically the dependence of the PFC surface morphological response on the areal density of holes introduced at regular time intervals onto the He-implanted tungsten surface, a parameter in our analysis that serves as a proxy for the rate of He bubble bursting. More importantly, our simulations capture fine surface features in the PFC tungsten surface morphology and predict that the average spacing between nanotendrils is on the order of 100 nm, consistent with the experimental findings.

Chen, Chao-Shou (ORCID:0000000307910042)↗
DOE OSTI2023

Improved Modeling of Waste Isolation Pilot Plant Disposal Room Porosity

Disposal rooms at the Waste Isolation Pilot Plant (WIPP) contain waste and gas, and their porosity evolves over time. This report presents several improvements to the disposal room porosity model and presents new porosity predictions for use in future WIPP Performance Assessment activities. The improvements pertain to three sub-models: the geomechanical model, the waste compaction model, and the gas pressurization model. The impacts of each major improvement were quantified and the new porosity predictions were shown to be both mesh and domain size converged. Also, sensitivity studies on the disposal room horizon, clay seam friction coefficients, and homogenized waste representation were performed to support assumptions in the disposal room porosity model. To compare the legacy and new porosity predictions, the simulation results were plotted as a response surface, where gas pressure and time are inputs and porosity is the output. The new porosity response surface is insensitive to pressures beneath lithostatic pressure and highly sensitive to pressures above lithostatic pressure. The legacy porosity response surface, on the other hand, has moderate porosity gradients over all pressures. The new porosity response surface has a stronger scientific foundation than the legacy surface and may now be used for Compliance Decision Analyses.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2020

CONTROLLED END GAS AUTO IGNITION WITH EXHAUST GAS RECIRCULATION ON A STOICHIOMETRIC, SPARK IGNITED, NATURAL GAS ENGINE

The goal of this study is to address fundamental limitations to achieving diesel-like efficiencies in heavy duty on-highway natural gas (NG) engines. Engine knock and misfire are barriers to pathways leading to higher efficiency engines. This study explores enabling technologies for development of high efficiency stoichiometric, spark ignited, natural gas engines. These include design strategies for fast and stable combustion and higher dilution tolerance. Additionally, advanced control methodologies are implemented to maintain stable operation between knock and misfire limits. To implement controlled end- gas autoignition (C-EGAI) strategies a Combustion Intensity Metric (CIM) is used for ignition control with the use of a Woodward large engine control module (LECM). Tests were conducted using a single cylinder, variable compression ratio, cooperative fuel research (CFR) engine with baseline conditions of 900 RPM, engine load of 800 kPa indicated mean effective pressure (IMEP), and stoichiometric air/fuel ratio. Exhaust gas recirculation (EGR) tests were performed using a custom EGR system that simulates a high pressure EGR loop and can provide a range of EGR rates from 0 to 40%. The experimental measurements included the variance of EGR rate, compression ratio, engine speed, IMEP, and CIM. These five variables were optimized through a Modified Box- Benken design Surface Response Method (RSM), with brake efficiency as the merit function. A positive linear correlation between CIM and f-EGAI was identified. Consequently, CIM was used as the feedback control parameter for C-EGAI. As such, implementation of C-EGAI effectively allowed for the utilization of high EGR rates and CRs, controlling combustion between a narrower gap between knock and lean limits. The change from fixed to parametric ignition timing with CIM targeted select values of f-EGAI with an average coefficient of variance (COV) of peak pressure of 5.4. The RSM efficiency optimization concluded with operational conditions of 1080 RPM, 1150 kPa IMEP, 10.55:1 compression ratio, and 17.8% EGR rate with a brake efficiency of 21.3%. At this optimized point of peak performance, a f-EGAI for C-EGAI was observed at 34.1% heat release due to auto ignition, a knock onset crank angle value of 10.3° aTDC and ignition timing of - 24.7° aTDC. This work has demonstrated that combustion at a fixed f-EGAI can be maintained through advanced ignition control of CIM without experiencing heavy knocking events.

Cooperative Fuel Research Engine, Auto Ignition, E↗
DOE OSTI2020

Dynamic PRA-Based Estimation of PWR Coping Time Using a Surrogate Model for Accident Tolerant Fuel

In this study, we propose an interpolation-based response surface surrogate methodology to manage a large number of scenarios in dynamic probabilistic risk assessment. It adopts the shape Dynamic Time Warping algorithm to cluster the interpolation neighborhood from time series sample data. The interpolation method was adapted from Taylor Kriging to allow a reduced-order model of the Taylor series. In order to demonstrate its applicability to complex issues in risk assessment for nuclear engineering, an example risk response surface to estimate emergency core cooling system (ECCS) criteria for triplex silicon carbide (SiC) accident-tolerant fuel was constructed. The response surface was exploited to estimate the cumulative failure probability of the fuel cladding structure due to the uncertainties in operator actions and safety systems. The functional failures were assessed based on a combination of individual layer failures computed by coupling Risk Analysis Virtual Environment software with a pressurized water reactor 1000-MW(electric) RELAP5 model and the in-house fuel performance assessment module. Results showed that SiC cladding failure probability spiked less than 1 min after a large-break loss-of- coolant accident whenever the current ECCS criteria for Zircaloy-4 (Zr-4) cladding was used. However, it still provides an increased safety margin of three orders of magnitude compared to Zr-4. This positive margin could be utilized to relax active ECCS requirements by allowing deviations of up to 450 s in its actuation time. The proposed surrogate methodology generated a response surface of SiC cladding failure probability reasonably well, with a significant savings of computation time. This methodology is expected to be useful in the analysis of system response with complex uncertainty sources.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2022

Neutral Mode Dominates the Forced Global and Regional Surface Temperature Response in the Past and Future

Abstract Using a large suite of Green's function perturbation experiments, we construct the emergent dynamical operator for surface temperature and extract the most excitable mode. The leading mode turns out to be the most dominant mode excited by the climate forcing of doubling CO 2 , alone capturing 56% of the total spatial variances of the surface temperature response. The pattern of the leading mode is partly organized by the atmospheric annular modes in both hemispheres, and further modulated by the feedbacks from ocean circulations. Though derived from a single model, the leading mode can capture the spatio‐temporal variabilities of the global mean surface temperature over the past century in both the CMIP6 model simulations and observations. Moreover, the leading mode is most efficiently excited by radiative forcings from the midlatitude bands centered around 45°N and 25°S, where most human activities take place, suggesting the potency of human influence on the climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Aggregation in bottom-up vulnerability assessments and equity implications: The case of Jordanian households’ water supply

Bottom-up methods for water resources modeling rely on acceptability thresholds to find, through a response surface, which deeply uncertain futures lead to system failure. They commonly treat water users as aggregate actors, which may preclude analysis of the equity impacts of interventions. This paper explores how aggregation choices for large groups of water users lead to different policy recommendations in response surface assessments. Herein, two aggregation methods with varying parameters are considered: percentile satisfaction targets and generalized mean. A 2-dimensional stress-test assessment across groundwater availability and population is applied to household water supply in Jordan. The study compares six different policies covering supply enhancement and rebalancing, using a country-wide multi-agent model that characterizes households across socioeconomic strata. For different aggregation levels, policies are ordered by their associated robustness index. Results show that aggregation choices may modify response surfaces as much as policy changes and strongly determine policy preference. Modifying allocation rules can substantially reduce the disparity in household vulnerability. Preferences defined by aggregation intervals provide a finer understanding of trade-offs among water users and may improve deliberation over equity under deep uncertainty.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Phenotypic plasticity of fungal traits in response to moisture and temperature

Phenotypic plasticity of traits is commonly measured in plants to improve understanding of organismal and ecosystem responses to climate change but is far less studied for microbes. Specifically, decomposer fungi are thought to display high levels of phenotypic plasticity and their functions have important implications for ecosystem dynamics. Assessing the phenotypic plasticity of fungal traits may therefore be important for predicting fungal community response to climate change. Here, we assess the phenotypic plasticity of 15 fungal isolates (12 species) from a Southern California grassland. Fungi were incubated on litter at five moisture levels (ranging from 4–50% water holding capacity) and at five temperatures (ranging from 4–36 °C). After incubation, fungal biomass and activities of four extracellular enzymes (cellobiohydrolase (CBH), β -glucosidase (BG), β -xylosidase (BX), and N-acetyl- β - D -glucosaminidase (NAG)) were measured. We used response surface methodology to determine how fungal phenotypic plasticity differs across the moisture-temperature gradient. We hypothesized that fungal biomass and extracellular enzyme activities would vary with moisture and temperature and that the shape of the response surface would vary between fungal isolates. We further hypothesized that more closely related fungi would show more similar response surfaces across the moisture-temperature gradient. In support of our hypotheses, we found that plasticity differed between fungi along the temperature gradient for fungal biomass and for all the extracellular enzyme activities. Plasticity also differed between fungi along the moisture gradient for BG activity. These differences appear to be caused by variation mainly at the moisture and temperature extremes. We also found that more closely related fungi had more similar extracellular enzymes activities at the highest temperature. Altogether, this evidence suggests that with global warming, fungal biodiversity may become increasingly important as functional traits tend to diverge along phylogenetic lines at higher temperatures.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Revisiting the equatorial Pacific sea surface temperature response to global warming

The relative roles of the oceanic and atmospheric processes in the pattern formation of the equatorial Pacific sea surface temperature (SST) response to global warming is investigated using a set of climate model experiments embedded with a novel partial coupling technique. Here, the modeling results show that the SST response experiences a transition from a La Niña-like warming pattern at the initial stage to an El Niño-like warming pattern at the quasi-equilibrium stage. By decomposing anomalous equatorial Pacific SST into atmosphere-forced passive component and ocean dynamics-induced active component, it is found that the SST warming pattern at both stages is entirely induced by its active component. Specifically, the meridional and vertical ocean circulation changes play a dominant role in forming the La Niña-like SST warming pattern at the initial stage, and the zonal and meridional ocean circulation changes are responsible for the formation of the El Niño-like SST warming pattern at the quasi-equilibrium stage. In contrast, the passive SST at both stages is characterized by a zonally uniform warming along the equator, which can be explained by a balance between the cooling effect associated with mean upwelling and the warming effect due to surface passive heat flux change. In addition, this study finds that it is the slowdown of the Pacific subtropical cells during the transition period that controls the evolution of the equatorial SST warming pattern by changing the meridional and vertical ocean heat transports.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Dual-Responsive Macromolecular Surfaces with Binary Patterns

The development of nanopatterned interfaces incorporating multiple stimuli-responsive polymers has great potential for advancing smart sensors and molecular capture devices, yet it remains challenging due to limitations in patterning techniques and “grafting from” methods. Here, we present a binary-patterned surface featuring honeycomb-shaped photothermal polypyrrole (PPy) and thermally responsive poly(ethylene glycol methyl ether acrylate-co-poly(ethylene glycol) methyl ether acrylate) [poly(EGMEA-co-PEGMEA)] brushes within the cavities, fabricated using colloidal lithography and surface-initiated photoinduced electron transfer-reversible addition–fragmentation chain transfer (SI-PET-RAFT) polymerization. The morphology of the surface can be precisely tuned by adjusting the height of each domain. This design integrates unique topographical features with the stimuli-responsiveness of the polymer, enabling the collapse of the copolymer brushes through direct heating or photothermal conversion of PPy under near-IR light. In conclusion, this innovative system offers potential capture-release functionality, providing versatility for diverse applications and enhancing adaptability across different functional scenarios.

Copolymers↗
DOE OSTI2022

Development and assessment of a model predictive controller enabling anticipatory control strategies for a heat-pipe system

To support the reliable and resilient operation of modular reactors and microreactors, anticipatory control strategies have been proposed for achieving faster-than-real-time predictions and decision-making capabilities in anticipation of potential anomalies, including setpoint changes and cyber incidents. Here this work presents how anticipatory control strategies can be implemented via model predictive control (MPC) of a single heat pipe’s temperature. Considering the uncertainty in developing and applying MPC, this work evaluates MPC performance given three different model forms: a linear response surface model, an artificial neural network (ANN), and an autoregressive model with exogenous input (ARX). This work also evaluates the impacts of different input biases and variance on MPC performance in order to account for potential sensor reading variations due to cyber incidents. We observe that nonparametric models such as the ANN and ARX result in more fluctuated control actions compared to the MPC applied to the linear response surface model. However, when the cyber incidents are of a large magnitude, the linear response surface model produces smaller feasible regions than the nonparametric models under identical constraints.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2023

Revisiting Interior Water Mass Responses to Surface Forcing Changes and the Subsequent Effects on Overturning in the Southern Ocean

Abstract Two coupled climate models, differing primarily in horizontal resolution and treatment of mesoscale eddies, were used to assess the impact of perturbations in wind stress and Antarctic ice sheet (AIS) melting on the Southern Ocean meridional overturning circulation (SO MOC), which plays an important role in global climate regulation. The largest impact is found in the SO MOC lower limb, associated with the formation of Antarctic Bottom Water (AABW), which in both models is enhanced by wind and weakened by AIS meltwater perturbations. Even though both models under the AIS melting perturbation show similar AABW transport reductions of 4–5 Sv (50%–60%), the volume deflation of AABW south of 30°S is four times greater in the higher resolution simulation (−20 vs. −5 Sv). Water mass transformation (WMT) analysis reveals that surface‐forced dense water formation on the Antarctic shelf is absent in the higher resolution and reduced by half in the lower resolution model in response to the increased AIS melting. However, the decline of the AABW volume (and its inter‐model difference) far exceeds the surface‐forced WMT changes alone, which indicates that the divergent model responses arise from interactions between changes in surface forcing and interior mixing processes. This model divergence demonstrates an important source of uncertainty in climate modeling, and indicates that accurate shelf processes together with scenarios accounting for AIS melting are necessary for robust projections of the deep ocean's response to anthropogenic forcing.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

A Study on Surface Texture and Wettability of Femtosecond Laser Treated Aluminum Alloys

This research aims to study the effects of femtosecond laser treatment on surface texture and wettability properties. The first portion of this research studies 2024-T3 aluminum alloy concerning surface texture (e.g., roughness), wettability, and surface free energy. SEM images help aid the researchers in detecting minuscule changes in surface texture. Profilometry extracts topographical data from the surface. A contact angle goniometer measures contact angle, which follows the sessile drop method. Owens, Wendt, Rabel, and Kaelble's method calculates the surface free energy in conjunction with the contact angle. Femtosecond laser modification produces relatively uniform surface morphology at the macroscale. When looking at the microscale, surface morphology differs depending on the interplay between material melting and self-assembly, where the surface becomes rougher after laser treatment. Contact angle results show that all but the control sample and sample 7 exhibit hydrophobic behavior, i.e., contact angle >90°, with Sample 1 having the most significant angle of 115°. The effects of laser parameters on surface energy is apparent. More work is needed to establish correlations among these three quantities: contact angle, surface energy, and laser parameters. The second portion of this research studies aluminum alloy 6061 as the subject material with the primary goal of creating a superhydrophobic surface. A central composite design creates the laser surface texturing design of experiments. SEM images help aid the researchers in detecting minuscule changes in surface texture. A 3D optical profiler extracts topographical data from the surface. The sessile drop method incorporates a contact angle goniometer to measure the contact angle. The response surface method builds a second-order polynomial model for the contact angle and obtains optimized parameters to maximize the contact angle. This research shows that laser surface texturing can generate a wide range of surface profiles and roughness values with geometric features ranging from hundreds of μm to submicron. All three laser parameters (pulse energy, pulse duration, repetition rate) affect surface roughness and contact angle to some degree. To quantify the relationship between the contact angle, pulse energy, and pulse repetition rate, a response surface model for Al 6061 is identified and used to find the optimal conditions of E=214 μJ, tp=10 ps, and fp=2427 Hz with a predicted maximum contact angle of 161°. A confirmation experiment produces a contact angle of 168°, in good agreement with the predicted value.

Angell, Dakota↗
DOE OSTI2024

Identifying Northern Hemisphere Stratospheric and Surface Temperature Responses to the Mt. Pinatubo Eruption within E3SMv2-SPA

The Mt. Pinatubo eruption on 15 June 1991 is often associated with surface warming in the subsequent Northern Hemisphere winter. Employing E3SMv2 with prognostic aerosol modifications, we generated an ensemble of simulations initialized on 1 June 1991 to limit the intra-ensemble variability at the time of the eruption and a more traditional ensemble representing the full range of intra-ensemble variability. For each ensemble member we generated a paired counterfactual simulation with the Pinatub forcing removed allowing for isolation of the Pinatubo impact. In general, the limited variability ensemble has greater coherence in the Pinatubo impact across ensemble members which leads to more statistically robust signals compared to the full variability ensemble. Stratospheric warming patterns from Pinatubo were approximately zonally symmetric and confined between 30°S and 50°N. Isolating localized surface temperature impacts was more difficult, but the limited variability simulation did identify a preferential region of cooling between 20°S to 50°N.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Processing Aleatory and Epistemic Uncertainties in Experimental Data From Sparse Replicate Tests of Stochastic Systems for Real-Space Model Validation

This paper presents a practical methodology for propagating and processing uncertainties associated with random measurement and estimation errors (that vary from test-to-test) and systematic measurement and estimation errors (uncertain but similar from test-to-test) in inputs and outputs of replicate tests to characterize response variability of stochastically varying test units. Also treated are test condition control variability from test-to-test and sampling uncertainty due to limited numbers of replicate tests. These aleatory variabilities and epistemic uncertainties result in uncertainty on computed statistics of output response quantities. The methodology was developed in the context of processing experimental data for “real-space” (RS) model validation comparisons against model-predicted statistics and uncertainty thereof. The methodology is flexible and sufficient for many types of experimental and data uncertainty, offering the most extensive data uncertainty quantification (UQ) treatment of any model validation method the authors are aware of. It handles both interval and probabilistic uncertainty descriptions and can be performed with relatively little computational cost through use of simple and effective dimension- and order-adaptive polynomial response surfaces in a Monte Carlo (MC) uncertainty propagation approach. A key feature of the progressively upgraded response surfaces is that they enable estimation of propagation error contributed by the surrogate model. Sensitivity analysis of the relative contributions of the various uncertainty sources to the total uncertainty of statistical estimates is also presented. Finally, the methodologies are demonstrated on real experimental validation data involving all the mentioned sources and types of error and uncertainty in five replicate tests of pressure vessels heated and pressurized to failure. Simple spreadsheet procedures are used for all processing operations.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Tropical Cyclone Precipitation Response to Surface Warming in Aquaplanet Simulations With Uniform Thermal Forcing

While many modeling studies have attempted to estimate how tropical cyclone (TC) precipitation is impacted by climate change, the multitude of analysis techniques and methodologies have resulted in varying conclusions. Simplified models may be able to help overcome this problem. Radiative-convective equilibrium (RCE) model simulations have been used in various configurations to study fundamental aspects of Earth's climate. While many RCE modeling studies have focused on TC genesis, intensification, and size, limited work has been done using RCE to study TC precipitation. Here, in this study, the response of TC precipitation to sea surface temperature (SST) change is analyzed in global Community Atmosphere Model (CAM) aquaplanet simulations run with Radiative-Convective Equilibrium Model Intercomparison Project protocols, with the addition of planetary rotation. We expect that the insight gained about how TC precipitation responds to SST warming will help predict how TCs in the real world respond to climate change. In the CAM RCE simulations, the warmer SST simulations have less TCs on average, but the TCs tend to be larger in outer size and more intense. As simulation SST increases, more extreme precipitation rates occur within TCs, and more of the TC precipitation comes from these extreme rates. For extreme (99th percentile) TC precipitation, SST, and TC intensity increases dominate the 8.6% per K increase, while TC outer size changes have little impact. For accumulated TC precipitation, SST, and TC intensity contributions are still the majority, but TC outer size changes also contribute to the 6.6% per K increase.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Helium bubble size effects on the surface morphological response of plasma-facing tungsten

Abstract We report a simulation study on the effects of helium (He) bubble size on the morphological evolution and pattern formation on the surface of tungsten used as a plasma-facing component (PFC) in nuclear fusion devices. We have carried out a systematic investigation based on self-consistent dynamical simulations of surface morphological evolution according to an atomistically-informed, 3D continuum-scale model that captures well the relevant length and time scales of surface nanostructure formation in PFC tungsten. The model accounts for PFC surface diffusion, driven by the biaxial compressive stress originating from the over-pressurized He bubbles in the near-surface region of PFC tungsten as a result of He plasma exposure, combined with the formation of self-interstitial atoms in tungsten that diffuse toward the PFC surface and the flux of surface adatoms generated as a result of surface vacancy-adatom pair formation upon He implantation; this transport of surface adatoms contributes to the anisotropic growth of surface nanostructural features due to the different rates of adatom diffusion along and across step edges of islands on the tungsten surface. Our detailed analysis reveals that varying the average He bubble size plays an important role in the PFC surface growth kinetics as well as the resulting surface topography. Specifically, we find that an increase in the He bubble size leads to a deceleration in the growth rate of the tungsten nanotendrils that emanate from the PFC surface. We also find that the separation distance between the resulting surface features increases with increasing He bubble size, as well as over time. This coarsening effect is a thermally activated process resulting in an accurate description of the temperature dependence of the average surface feature separation by an Arrhenius relation.

36 MATERIALS SCIENCE↗
DOE OSTI2025

gaia: An R package to estimate crop yield responses to temperature and precipitation

gaia is an open-source R package designed to estimate crop yield shocks in response to annual weather variations and CO 2 concentrations at the country scale for 17 major crops. This innovative tool streamlines the workflow from raw climate data processing to projections of annual shocks to crop yields at the country level, using the response surfaces from an empirical econometric model developed and documented in Waldhoff et al. (2020), which leverages historical weather, CO 2 , and crop yield data for robust empirical fitting for 17 crops. gaia uses these response surfaces with monthly temperature and precipitation projections (e.g., from the Coupled Model Intercomparison Project Phase 6 (CMIP6) (O’Neill et al., 2016) climate data bias-adjusted and statistically downscaled by the ISIMIP3BASD approach (Lange, 2019) in the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) (Warszawski et al., 2014)) to project yield shocks that can be applied to agricultural productivity changes at the country level for use in multisectoral economic models. The historical and future projections use gridded, country-and-crop specific monthly growing season precipitation and temperature data, aggregated to the national level, and weighted by cropland area derived from the global Monthly Irrigated and Rainfed Crop Areas around the year 2000 (MIRCA2000) dataset (Portmann et al., 2010). These annual, country, and crop-specific yield shocks can be aggregated to different definitions of regions, crop commodities, and time periods, as needed by specific multisectoral economic models. gaia serves as a lightweight, powerful tool that can aid exploration of crop yield responses under a broad range of future climate projections, enhancing human-Earth system analysis capabilities.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Price equation captures the role of drug interactions and collateral effects in the evolution of multidrug resistance

Bacterial adaptation to antibiotic combinations depends on the joint inhibitory effects of the two drugs (drug interaction [DI]) and how resistance to one drug impacts resistance to the other (collateral effects [CE]). Here we model these evolutionary dynamics on two-dimensional phenotype spaces that leverage scaling relations between the drug-response surfaces of drug-sensitive (ancestral) and drug-resistant (mutant) populations. We show that evolved resistance to the component drugs – and in turn, the adaptation of growth rate – is governed by a Price equation whose covariance terms encode geometric features of both the two-drug-response surface (DI) in ancestral cells and the correlations between resistance levels to those drugs (CE). Within this framework, mean evolutionary trajectories reduce to a type of weighted gradient dynamics, with the drug interaction dictating the shape of the underlying landscape and the collateral effects constraining the motion on those landscapes. We also demonstrate how constraints on available mutational pathways can be incorporated into the framework, adding a third key driver of evolution. Our results clarify the complex relationship between drug interactions and collateral effects in multidrug environments and illustrate how specific dosage combinations can shift the weighting of these two effects, leading to different and temporally explicit selective outcomes.

Gjini, Erida↗