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DOE OSTI2020

Computer-aided classification of suspicious pigmented lesions using wide-field images

Early identification of melanoma is conducted through whole-body visual examinations to detect suspicious pigmented lesions, a situation that fluctuates in accuracy depending on the experience and time of the examiner. Computer-aided diagnosis tools for skin lesions are typically trained using pre-selected single-lesion images, taken under controlled conditions, which limits their use in wide-field scenes. Here, we propose a computer-aided classifier system with such input conditions to aid in the rapid identification of suspicious pigmented lesions at the primary care level. 133 patients with a multitude of skin lesions were recruited for this study. All lesions were examined by a board-certified dermatologist and classified into “suspicious” and “non-suspicious”. A new clinical database was acquired and created by taking Wide-Field images of all major body parts with a consumer-grade camera under natural illumination condition and with a consistent source of image variability. 3–8 images were acquired per patient on different sites of the body, and a total of 1759 pigmented lesions were extracted. A machine learning classifier was optimized and build into a computer aided classification system to binary classify each lesion using a suspiciousness score. In a testing set, our computer-aided classification system achieved a sensitivity of 100% for suspicious pigmented lesions that were later confirmed by dermoscopy examination (“SPL_A”) and 83.2% for suspicious pigmented lesions that were not confirmed after examination (“SPL_B”). Sensitivity for non-suspicious lesions was 72.1%, and accuracy was 75.9%. With these results we defined a suspiciousness score that is aligned with common macro-screening (naked eye) practices. This work demonstrates that wide-field photography combined with computer-aided classification systems can distinguish suspicious from non-suspicious pigmented lesions, and might be effective to assess the severity of a suspicious pigmented lesions. We believe this approach could be useful to support skin screenings at a population-level.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2020

Shock-induced kinetics and cellular structures of liquid nitromethane detonation

Using a combination of high-speed diagnostics, optical pyrometry, velocimetry and video photography, we examine the spatiotemporal reaction kinetics of a prototypical high-energy explosive, liquid nitromethane (NM), as we drive this high explosive into detonation. The detonations were initiated by powerful shock waves whose durations (4 ns) were shorter than the characteristic time associated with the reaction (7 ns). Simple optical spectroscopy alone cannot characterize the kinetics with high time resolution because the reactants and products are flowing at a high velocity of ~6 km/s (6 µm/ns). Additionally, every detection volume behind the shock front contains material initiated over a range of times. High spatial resolution can be obtained by probing interfaces where the shock enters or breaks out of the NM. In addition, we obtain cellular patterns imprinted on the luminous shock front by the two-stage explosion in NM. These spatiotemporal patterns arise naturally as a result of the asymmetry produced by the moving shock front. In this way the shock front serves as a thin moving intrinsic optical gauge that reports and characterizes the two-stage NM explosion behind the front.

42 ENGINEERING↗

DOE OSTI2021

Transverse impact by RCCs on S-glass and Kevlar® FRC strips

This study aims to isolate interactions between plies and tows and reveal fundamental physics involved in transverse impact on fiber-reinforced composite (FRC) structures. Composite strips were sectioned from large panels and characterized by optical photography, three-dimensional synchrotron X-ray computed tomography, and scanning electron microscopy (SEM). Each strip was impacted perpendicularly by a right circular cylinder (RCC) projectile at a velocity ranging from ~ 150 to 600 m/s. The global strip behavior, as well as localized deformation and failure of the strip near the projectile corner, were both captured by high-speed optical imaging. S-Glass FRC strips were observed to fail in tension ahead of the RCC projectiles’ flat surfaces while Kevlar® FRC strips fractured at the projectile corners. The concept of critical velocity region previously used for impact on yarns was introduced to define different failure modes of each composite strip type. The strip damage extent was found to increase with the impact velocity and reach the maximum at the upper limit of the critical velocity region. Above the critical velocity region, the damage extent decreased with impact velocity. Wave propagations and load histories in the composite strips during impact were quantified and compared with Smith’s theory. Finally, critical velocities of single fibers, yarns, and composite strips and ballistic limits of single-ply and multi-ply composite panels were compared to provide insight into the design of impact-resistant fabrics and composites.

42 ENGINEERING↗

DOE OSTI2025

Non-stoichiometry Governs the Pathway from Amorphous to Crystalline Calcium Carbonate

The controlled crystallization of calcium carbonate underlies the elaborate architectures of marine corals, the design of biomimetic materials, and the global carbon cycle. Despite its ubiquity, the chemical mechanisms that govern the crystallization of calcium carbonate from its amorphous precursor, amorphous calcium carbonate (ACC), remain elusive, largely due to the difficulty in resolving the structure and chemistry of this transient amorphous state. Here, we use time-lapse photography, image analysis, spatially resolved pH determination, in situ synchrotron pair distribution function (PDF) analysis, and dynamic nuclear polarization (DNP) solid-state nuclear magnetic resonance (NMR) spectroscopy to reveal pervasive compositional variability in ACC that underpins its metastability and crystallization. By evaluating the kinetics of the amorphous-to-crystalline transition across different solution chemistries, we demonstrate that ACC is non-stoichiometric and CO 3 -deficient. Counterions from the precursor (e.g., NO 3 - from Ca(NO 3 ) 2 ) substitute into the ACC network, displacing CO 3 ions and mediating both ACC stability and transformation. Crystallization proceeds through refinement of the stoichiometry toward CaCO 3 and uptake of free CO 3 2- anions. Furthermore, these findings are consistent across a wide range of concentrations and different carbonate sources, explaining the diverse behaviors observed for ACC and providing a chemical framework for controlling calcium carbonate crystallization.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

DOE OSTI2020

Changes in Physical Properties of Everglades Peat Soils Induced by Increased Salinity at the Laboratory Scale: Implications for Changes in Biogenic Gas Dynamics

Abstract Saltwater intrusion due to sea level rise is a major concern for the Florida Everglades because it may induce shifts in ecosystem productivity and physical soil properties. However, the effects of saline water intrusion into the current carbon gas dynamics of the Everglades (particularly in terms of biogenic gas production and emissions, i.e., CH 4 and CO 2 ) are still uncertain. In this work, we present a laboratory‐based study to simulate how sea level rise may alter the physical properties (i.e., hydraulic conductivity) of peat soils from the Everglades and consequently affect the accumulation and release of biogenic gases within the peat matrix. Peat monoliths collected from the Everglades were subjected to progressive increases in salinity from a NaCl solution, and changes to the biogenic gas dynamics regime were simultaneously monitored using a combination of time‐lapse ground‐penetrating radar measurements, manometers, time‐lapse photography, and gas traps. Physical changes to the peat matrix at each salinity interval were assessed using constant head permeameter tests. Consistent with previous research, results show that a progressive increase in salinity (from fresh to saltwater) results in (1) a progressive increase in hydraulic conductivity and (2) a progressive decrease in gas content within the peat matrix (i.e., production) and gas releases. This work has implications for better understanding the potential effects of saltwater intrusion into freshwater peatland systems in the Everglades, particularly in terms of carbon gas dynamics.

Sirianni, Matthew J.↗

DOE OSTI2022

Wintertime Brine Discharge at the Surface of a Cold Polar Glacier and the Unexpected Absence of Associated Seismicity

A subglacial groundwater system beneath Taylor Glacier, Antarctica, discharges hypersaline, iron-rich brine episodically at the glacier surface to create Blood Falls. However, the triggering mechanism for these brine release events is not yet understood. Identifying which fracture processes are observed seismically can help us better characterize the hydrological system at Taylor Glacier, and more generally, provide us with a broader understanding of englacial hydrologic activity in cold glaciers. We document wintertime brine discharge using time-lapse photography. Subfreezing air temperatures during the brine discharge indicate that surface melt-induced hydrofracture is an unlikely trigger for brine release. Further, we analyze local seismic data to test a hypothesis that fracturing generates elevated surface wave energy preceding and/or coinciding with brine release events. Our results show no discernible elevated Rayleigh wave activity prior to or during Blood Falls brine release. Instead, we find a pattern of seismic events dominated by a seasonal signal, with more Rayleigh events occurring in the summer than the winter from the Blood Falls source area. We calculate that the volumetric opening of cracks that would generate Rayleigh waves at our detection limits are of similar size to myriad cracks in glacier ice, lake ice, and frozen sediment in the terminus area. We therefore propose that any fracturing coincident with brine release activity likely consists of a series of smaller opening events that are masked by other seismicity in the local environment.

58 GEOSCIENCES↗

DOE OSTI2020

Modeling root system growth around obstacles

State-of-the-Art models of Root System Architecture (RSA) do not allow simulating root growth around rigid obstacles. Yet, the presence of obstacles can be highly disruptive to the root system. We grew wheat seedlings in sealed petri dishes without obstacle and in custom 3D-printed rhizoboxes containing obstacles. Time-lapse photography was used to reconstruct the wheat root morphology network. We used the reconstructed wheat root network without obstacle to calibrate an RSA model implemented in the R-SWMS software. The root network with obstacles allowed calibrating the parameters of a new function that models the influence of rigid obstacles on wheat root growth. Experimental results show that the presence of a rigid obstacle does not affect the growth rate of the wheat root axes, but that it does influence the root trajectory after the main axis has passed the obstacle. The growth recovery time, i.e. the time for the main root axis to recover its geotropism-driven growth, is proportional to the time during which the main axis grows along the obstacle. Qualitative and quantitative comparisons between experimental and numerical results show that the proposed model successfully simulates wheat RSA growth around obstacles. Our results suggest that wheat roots follow patterns that could inspire the design of adaptive engineering flow networks.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2020

Experimental investigation of internal two-phase flow structures and dynamics of quasi-stable sheet cavitation by fast synchrotron x-ray imaging

The quasi-stable sheet cavitation produced in a small Venturi channel is investigated using a fast synchrotron X-ray imaging technique aided with conventional high speed photography. The use of X-rays instead of visible light solves cavitation opacity related issues, and X-ray phase contrast-based edge enhancement enables high-definition visualization of the internal two-phase morphology. The simultaneous acquisition of time-resolved velocity and void fraction fields through post-processing the recorded X-ray images reveals, for the first time, the complex diphasic flow structures inside the sheet cavity, which is essentially divided into 6 characteristic parts. Distinct from the current mainstream view, the globallysteady sheet cavitation is found to be characterized by a weak but constantly-existing re-entrant flow that can penetrate the entire cavity. The turbulent velocity fluctuations inside the sheet cavity are also investigated. The turbulence level in the reverse flow region is observed to be as low as in the outer main flow demonstrating the relatively steady status of the reentrant flow. Unlike the streamwise and cross-stream fluctuations, the shear stress appears to be weakly correlated with the velocity gradient. The collapse of vapor phase and the vaporization at the upstream cavity interface are found to be the primary causes of shear stress intensification.

42 ENGINEERING↗

DOE OSTI2021

Experimental study of atmospheric pressure single-pulse nanosecond discharge in pin-to-pin configuration

We present an experimental study of nanosecond high-voltage discharges in a pin-to-pin electrode configuration at atmospheric conditions operating in single-pulse mode (no memory effects). Discharge parameters were measured using microwave Rayleigh scattering, laser Rayleigh scattering, optical emission spectroscopy enhanced with a nanosecond probing pulse, and fast photography. Spark and corona discharge regimes were studied for electrode gap sizes 2-10 mm and discharge pulse duration of 90 ns. The spark regime was observed for gaps < 6 mm using discharge pulse energies of 0.6-1 mJ per mm of the gap length. Higher electron number densities, total electron number per gap length, discharge currents, and gas temperatures were observed for smaller electrode gaps and larger pulse energies, reaching maximal values of about 7.5 x 10 15 cm -3 , 3.5 x 10 11 electrons per mm, 22 A, and 4,000 K (at 10 microseconds after the discharge), respectively, for a 2 mm gap and 1 mJ/mm discharge pulse energy. Initial breakdown was followed by a secondary breakdown occurring about 30-70 ns later and was associated with ignition of a cathode spot and transition to cathodic arc. Here, a majority of the discharge pulse energy was deposited into the gas before the secondary breakdown (85-89%). The electron number density after the ns-discharge pulse decayed with a characteristic time scale of 150 ns governed by dissociative recombination and electron attachment to oxygen mechanisms. For the corona regime, substantially lower pulse energies (~0.1 mJ/mm), peak conduction current (1-2 A), and electron numbers (3-5 x 10 10 electrons per mm), and gas temperatures (360 K) were observed.

42 ENGINEERING↗

DOE OSTI2025

Deep-learning-based canopy height model generation from sub-meter resolution panchromatic satellite imagery

Canopy height models (CHMs) with sufficient resolution to distinguish individual trees are useful for a variety of applications. However, standard techniques to acquire such data, such as airborne lidar surveying, are often prohibitively expensive. Deep learning techniques for generating CHMs from high-resolution imagery are an attractive option to reduce costs. To date, success with these methods has been demonstrated using multichannel aerial photography and specialized satellite data products derived from multiple sensors, neither of which is commonly available at temporal resolutions finer than one year. Here we demonstrate a method to generate sub-meter resolution CHMs in three forests in California using a more abundant data source: sub-meter resolution, panchromatic satellite imagery from a single sensor. We show that phenology and species composition play important roles in model transferability; when trained using imagery from a single conifer forest in autumn, the model performs well on autumn imagery from a second conifer forest several hundred kilometers distant with no re-training. With modest additions to the training dataset, the same model generates minimally biased estimates of canopy height in both conifer and deciduous forests during multiple seasons. Because the model operates on satellite data with global coverage and a relatively short return interval, we propose its suitability to extrapolate tree-level canopy height data to remote regions and conduct high-temporal resolution monitoring of forest structure. We furthermore demonstrate the workflow’s applicability to fire modeling by conducting simulations in forests populated by trees measured using both this approach and airborne lidar surveying. We find minimal differences in fire behavior relative to a baseline case in which only statistical distributions of tree height and crown area are known. This result underscores the value of forest structural information derived from our workflow for improving the fidelity of wildland fire simulations, among other ecological applications.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Photovoltaic Cable Connectors: A Comparative Assessment of the Present State of the Industry

The consequences of failure for balance-of-systems components (such as photovoltaic (PV) cable connectors) include offline module string(s); low system voltage; arc, ground, insulation, and overtemperature faults; triggered fuse(s); system shutdown; and fire. The degradation modes for connectors are studied here through an industry survey and its subsequent examination, which are compared with field-degraded specimens. A total of 117 specimens were obtained from a variety of locations and climates or accelerated tests. A failure analysis for connectors from PV installations was developed (and applied to 54 specimens), including nondestructive examinations (photography, a custom resistance-current scan, and X-ray computed tomography) and destructive examinations (featuring milling of the external plastic, extraction of the internal convolute spring, and potting and polishing in cross section). Surface and through-thickness composition of the metal pins and springs was quantified using scanning electron microscopy with energy-dispersive X-ray spectroscopy. Fourier transform infrared spectroscopy was used to verify the base polymer materials and compare the chemical structure of the connector body, bushing, end nut, and o-ring. Thermogravimetric analysis and differential scanning calorimetry were used to further verify the degradation of the same polymeric components.

cable connectors↗

DOE OSTI2021

FPV Video Adaptation for UAV Collision Avoidance

First person view (FPV) technology for unmanned aerial vehicles (UAVs) provides an immersive experience for pilots and enables various personal and commercial applications such as aerial photography, drone racing, search and rescue operations, agricultural surveillance, and structural inspection. While real time video streaming from a UAV and vision-based collision avoidance strategies have been studied in literature as separate topics, in this paper we tackle collision avoidance in FPV scenarios, taking into account network delays and real time video parameters. We present a theoretical model for obstacle collisions that considers the current communication channel conditions, the real time video parameters, and the UAV's position relative to the closest obstacle. A video adaptation algorithm is then designed, using this metric, to tune the FPV video resolution, number of re-transmission attempts, and the modulation scheme to maximize the probability of avoiding collisions. This algorithm also takes into account specific latency constraints of the application. This video algorithm was evaluated in various scenarios and its ability to respond to both distances to the obstacle as well as the communication channel conditions was demonstrated. It was found that, for the considered scenarios, the performance of the proposed adaptive algorithm was, on an average, 58.63% higher than the closest non-adaptive one in terms of maximizing the probability of avoiding collision. Such collision avoidance strategies could be used to make UAV FPV applications safer and more reliable.

47 OTHER INSTRUMENTATION↗

DOE OSTI2023

Capturing high‐resolution digital images for use in forensic document examination

Abstract In the past, pattern disciplines within forensic science have periodically faced criticism due to their subjective and qualitative nature and the perceived absence of research evaluating and supporting the foundations of their practices. Recently, however, forensic scientists and researchers in the field of pattern evidence analysis have developed and published approaches that are more quantitative, objective, and data driven. This effort includes automation, algorithms, and measurement sciences, with the end goal of enabling conclusions to be informed by quantitative models. Before employing these tools, forensic evidence must be digitized in a way that adequately balances high‐quality detail and content capture with minimal background noise imparted by the selected technique. While the current work describes the process of optimizing a method to digitize physical documentary evidence for use in semi‐automated trash mark examinations, it could be applied to assist other disciplines where the digitization of physical items of evidence is prevalent. For trash mark examinations specifically, it was found that high‐resolution photography provided optimal digital versions of evidentiary items when compared to high‐resolution scanning.

Riley, Paige↗

DOE OSTI2023

Strength distributions of laminated FeNi-based metal amorphous nanocomposite ribbons

Metal Amorphous Nanocomposite (MANC) materials offer low losses at high magnetic switching frequency, enabling high power density motors with increased rotational speed. While MANCs have high strength, they are brittle. The use of motor components such as a rotor consisting of brittle material presents a reliability concern. Here, a promising MANC alloy is subjected to tensile tests and failure is observed with high-speed photography. A method is developed to prepare tensile specimens of laminated MANC and epoxy layers, simulating the stacking of an epoxy-impregnated tape-wound core. Tensile tests are conducted for single layer ribbon and for five- and ten-layer stacks of laminated material with thin layers of thermosetting epoxy. Failure distributions are shown to have increasing Weibull modulus with increasing layer count. The composite MANC material system is modeled using chain-of-bundles models. Using a k-failure model, we show that single ribbon strength distribution data can be used to predict well the failure distribution of laminated stacks. The agreement occurs when the assumed ineffective length, over which load is recovered in a failed layer, is comparable to the observed interlaminar separation length.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2022

Evaluation of sky spectra and sky models in daylighting simulations

Sky models in daylight simulations represent the luminance variation across the sky-dome for different locations, dates, times and weather conditions, but skies are typically modelled as colourless. Recent studies explore techniques for incorporating the spectral content of daylighting in simulations. This paper provides an evaluation of the existing spectral sky models in lighting simulation software. The comparisons are made between the available mathematical sky models and naturally occurring skies that were recorded using high dynamic range photography and spectrophotometric measurements. The results show that recently developed sky models present progress compared to colourless sky models, but further research is needed to accurately simulate daylight spectra.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

Characterizing post-fire delayed tree mortality with remote sensing: sizing up the elephant in the room

Abstract Background Despite recent advances in understanding the drivers of tree-level delayed mortality, we lack a method for mapping delayed mortality at landscape and regional scales. Consequently, the extent, magnitude, and effects of delayed mortality on post-fire landscape patterns of burn severity are unknown. We introduce a remote sensing approach for mapping delayed mortality based on post-fire decline in the normalized burn ratio (NBR). NBR decline is defined as the change in NBR between the first post-fire measurement and the minimum NBR value up to 5 years post-fire for each pixel. We validate the method with high-resolution aerial photography from six wildfires in California, Oregon, and Washington, USA, and then compare the extent, magnitude, and effects of delayed mortality on landscape patterns of burn severity among fires and forest types. Results NBR decline was significantly correlated with post-fire canopy mortality (r 2 = 0.50) and predicted the presence of delayed mortality with 83% accuracy based on a threshold of 105 NBR decline. Plots with NBR decline greater than 105 were 23 times more likely to experience delayed mortality than those below the threshold (p < 0.001). Delayed mortality occurred across 6–38% of fire perimeters not affected by stand-replacing fire, generally affecting more areas in cold (22–41%) and wet (30%) forest types than in dry (1.7–19%) types. The total area initially mapped as unburned/very low-severity declined an average of 38.1% and generally persisted in smaller, more fragmented patches when considering delayed mortality. The total area initially mapped as high-severity increased an average of 16.2% and shifted towards larger, more contiguous patches. Conclusions Differences between 1- and 5-year post-fire burn severity maps depict dynamic post-fire mosaics resulting from delayed mortality, with variability among fires reflecting a range of potential drivers. We demonstrate that tree-level delayed mortality scales up to alter higher-level landscape patterns of burn severity with important implications for forest resilience and a range of fire-driven ecological outcomes. Our method can complement existing tree-level studies on drivers of delayed mortality, refine mapping of fire refugia, inform estimates of habitat and carbon losses, and provide a more comprehensive assessment of landscape and regional scale fire effects and trends.

Environmental Sciences & Ecology↗

DOE OSTI2024

Canopy reflectance spectroscopy, thermal images and digital photographs, San Lorenzo, Panama, 2020

This data package comprises reflectance spectra, thermal and visible images of top of canopy tree crowns at the San Lorenzo Protected Area, Panama. Data were collected using the Smithsonian Tropical Research Institute (STRI) canopy access crane, from positions approximately 4 m above the target tree canopy. Canopy reflectance spectra were collected using an HR-1024i full range spectroradiometer (350–2500 nm, SVC, Poughkeepsie, NY, USA) with a 14-degree lens. Canopy thermal images were captured using an 8640-S series USB Calibrated Thermal Camera (ICI International, Beaumont, TX, USA). Visible images were collected using an AW130 waterproof/shockproof camera (Nikon, Tokyo, Japan). Data were collected on three days, on 16 canopies from 10 tree species. On both January 30, 2020, and February 27, 2020, we collected spectra at three time points, in the morning, midday, and afternoon. On February 18, 2020, we collected data around midday only. Due to technical issues, digital photography was collected on 30 January only. This dataset includes unprocessed data only, including spectral data (.sig or .sed), thermal images (.i16), and photographs (.raw), a detailed method description (.pdf), species information (.csv) and ESS-DIVE file-level metadata (FLMD.csv).

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Citizen Green #1 Well: Quantitative XRD & Thin Section Data

This submission includes information on quantitative x-ray diffraction measurements and thin section photography conducted on sidewall cores from the Citizen Green #1 well drilled on King Island, CA (API 07720688) as part of the WESTCARB partnership basin characterization effort. Cores were acquired with a rotary sidewall tool at a range of depths; only deeper cores were sufficiently consolidated for analysis. SidewallCoreFormationDepthNotes.xls provides details on available samples. Helium porosimetry, air permeability, and brine permeability measurements were conducted on all competent samples (~15). Samples were largely in the Mokelumne, H&T shale, and Starkey formations. All measurements were conducted at Lawrence Berkeley National Laboratory.

Thin Section↗