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At least 37 records · Page 2

GeneLab: A Systems Biology Platform for Spaceflight Omics Data

NASA's mission includes expanding our understanding of biological systems to improve life on Earth and to enable long-duration human exploration of space. Resources to support large numbers of spaceflight investigations are limited. NASA's GeneLab project is maximizing the science output from these experiments by: (1) developing a unique public bioinformatics database that includes space bioscience relevant "omics" data (genomics, transcriptomics, proteomics, and metabolomics) and experimental metadata; (2) partnering with NASA-funded flight experiments through bio-sample sharing or sample augmentation to expedite omics data input to the GeneLab database; and (3) developing community-driven reference flight experiments. The first database, GeneLab Data System Version 1.0, went online in April 2015. V1.0 contains numerous flight datasets and has search and download capabilities. Version 2.0 will be released in 2016 and will link to analytic tools. In 2015 Genelab partnered with two Biological Research in Canisters experiments (BBRIC-19 and BRIC-20) which examine responses of Arabidopsis thaliana to spaceflight. GeneLab also partnered with Rodent Research-1 (RR1), the maiden flight to test the newly developed rodent habitat. GeneLab developed protocols for maxiumum yield of RNA, DNA and protein from precious RR-1 tissues harvested and preserved during the SpaceX-4 mission, as well as from tissues from mice that were frozen intact during spaceflight and later dissected. GeneLab is establishing partnerships with at least three planned flights for 2016. Organism-specific nationwide Science Definition Teams (SDTs) will define future GeneLab dedicated missions and ensure the broader scientific impact of the GeneLab missions. GeneLab ensures prompt release and open access to all high-throughput omics data from spaceflight and ground-based simulations of microgravity and radiation. Overall, GeneLab will facilitate the generation and query of parallel multi-omics data, and deep curation of metadata for integrative analysis, allowing researchers to uncover cellular networks as observed in systems biology platforms. Consequently, the scientific community will have access to a more complete picture of functional and regulatory networks responsive to the spaceflight environment.. Analysis of GeneLab data will contribute fundamental knowledge of how the space environment affects biological systems, and enable emerging terrestrial benefits resulting from mitigation strategies to prevent effects observed during exposure to space. As a result, open access to the data will foster new hypothesis-driven research for future spaceflight studies spanning basic science to translational science.

proteomics↗

GNSS Installation at the ARM North Slope of Alaska Atmospheric Observatory Field Campaign Report

GRUAN, the Global Climate Observing System (GCOS) Reference Upper Air Network, is an international reference observing network of sites measuring essential climate variables above Earth's surface, designed to fill an important gap in the current global observing system. GRUAN’s objectives are to (1) provide long-term, high-quality climate records, (2) constrain and calibrate data from more spatially comprehensive global observing systems (including satellites and current radiosonde networks) and (3) fully characterize the properties of the atmospheric column.

54 ENVIRONMENTAL SCIENCES↗

GNSS Installation at the Eastern North Atlantic (ENA) Atmospheric Observatory Field Campaign Report

GRUAN, the Global Climate Observing System (GCOS) Reference Upper Air Network, is an international reference observing network of sites measuring essential climate variables above Earth's surface, designed to fill an important gap in the current global observing system. GRUAN’s objectives are to (1) provide long-term, high-quality climate records, (2) constrain and calibrate data from more spatially comprehensive global observing systems (including satellites and current radiosonde networks), and (3) fully characterize the properties of the atmospheric column.

54 ENVIRONMENTAL SCIENCES↗

Information Content of a Synergy of Ground-Based and Space-Based Infrared Sounders. Part I: Clear-Sky Environments

Abstract Profiles of atmospheric temperature and water vapor from remotely sensed platforms provide critical observations within the temporal and spatial gaps of the radiosonde network. The 2017 National Academies of Science Decadal Survey highlighted that observations of the planetary boundary layer (PBL) from the current space-based observing system are not of the necessary accuracy or resolution for monitoring and predicting high-impact weather phenomena. One possible solution to improving observations of the PBL is supplementing the existing space-based observing system with a network of ground-based profilers. A synthetic information content study is developed utilizing profiles from the Atmospheric Radiation Measurement (ARM) program sites at the Southern Great Plains (SGP), east North Atlantic (ENA), and North Slope of Alaska (NSA) to assess the benefits, in terms of degrees of freedom (DOF), vertical resolution, and uncertainties, of a synergy between the ground-based Atmospheric Emitted Radiance Interferometer (AERI) with space-based hyperspectral infrared (IR) sounders. A combination of AERI with any of the three polar-orbiting IR sounders: the Atmospheric Infrared Sounder (AIRS), the Cross-track Infrared Sounder (CrIS), or the Infrared Atmospheric Sounding Interferometer (IASI), results in a DOF increase of 30%–40% in the surface-to-700-hPa layer compared to the space-based instrument alone. Introducing AERI measurements to the observing system also results in significant improvements to vertical resolution and uncertainties in the bottom 1000 m of the atmosphere compared to CrIS measurements alone. A synergy of CrIS and AERI exceeds the 1-km-vertical-resolution goal set by the Decadal Survey in the lowest 1000 m.

54 ENVIRONMENTAL SCIENCES↗

Structural inference of networked dynamical systems with universal differential equations

Networked dynamical systems are common throughout science in engineering; e.g., biological networks, reaction networks, power systems, and the like. For many such systems, nonlinearity drives populations of identical (or near-identical) units to exhibit a wide range of nontrivial behaviors, such as the emergence of coherent structures (e.g., waves and patterns) or otherwise notable dynamics (e.g., synchrony and chaos). Here, we seek to infer (i) the intrinsic physics of a base unit of a population, (ii) the underlying graphical structure shared between units, and (iii) the coupling physics of a given networked dynamical system given observations of nodal states. These tasks are formulated around the notion of the Universal Differential Equation, whereby unknown dynamical systems can be approximated with neural networks, mathematical terms known a priori (albeit with unknown parameterizations), or combinations of the two. We demonstrate the value of these inference tasks by investigating not only future state predictions but also the inference of system behavior on varied network topologies. The effectiveness and utility of these methods are shown with their application to canonical networked nonlinear coupled oscillators.

97 MATHEMATICS AND COMPUTING↗

Network Performance Measurements for NASA's Earth Observation System

NASA's Earth Observation System (EOS) Project studies all aspects of planet Earth from space, including climate change, and ocean, ice, land, and vegetation characteristics. It consists of about 20 satellite missions over a period of about a decade. Extensive collaboration is used, both with other US. agencies (e.g., National Oceanic and Atmospheric Administration (NOA), United States Geological Survey (USGS), Department of Defense (DoD), and international agencies (e.g., European Space Agency (ESA), Japan Aerospace Exploration Agency (JAXA)), to improve cost effectiveness and obtain otherwise unavailable data. Scientific researchers are located at research institutions worldwide, primarily government research facilities and research universities. The EOS project makes extensive use of networks to support data acquisition, data production, and data distribution. Many of these functions impose requirements on the networks, including throughput and availability. In order to verify that these requirements are being met, and be pro-active in recognizing problems, NASA conducts on-going performance measurements. The purpose of this paper is to examine techniques used by NASA to measure the performance of the networks used by EOSDIS (EOS Data and Information System) and to indicate how this performance information is used.

Loiacono, Joe↗

Observability and Estimation of Distributed Space Systems via Local Information-Exchange Networks

Spacecraft formation flying involves the coordination of states among multiple spacecraft through relative sensing, inter-spacecraft communication, and control. Most existing formation-flying estimation algorithms can only be supported via highly centralized, all-to-all, static relative sensing. New algorithms are proposed that are scalable, modular, and robust to variations in the topology and link characteristics of the formation exchange network. These distributed algorithms rely on a local information exchange network, relaxing the assumptions on existing algorithms. Distributed space systems rely on a signal transmission network among multiple spacecraft for their operation. Control and coordination among multiple spacecraft in a formation is facilitated via a network of relative sensing and interspacecraft communications. Guidance, navigation, and control rely on the sensing network. This network becomes more complex the more spacecraft are added, or as mission requirements become more complex. The observability of a formation state was observed by a set of local observations from a particular node in the formation. Formation observability can be parameterized in terms of the matrices appearing in the formation dynamics and observation matrices. An agreement protocol was used as a mechanism for observing formation states from local measurements. An agreement protocol is essentially an unforced dynamic system whose trajectory is governed by the interconnection geometry and initial condition of each node, with a goal of reaching a common value of interest. The observability of the interconnected system depends on the geometry of the network, as well as the position of the observer relative to the topology. For the first time, critical GN&C (guidance, navigation, and control estimation) subsystems are synthesized by bringing the contribution of the spacecraft information-exchange network to the forefront of algorithmic analysis and design. The result is a formation estimation algorithm that is modular and robust to variations in the topology and link properties of the underlying formation network.

Fathpour, Nanaz↗

Improving the Representation of Land Surface Processes Using the Data Assimilation Research Testbed (DART)

The land surface is a critical part of the earth system as processes related to water, carbon, energy and nitrogen cycling have important implications for climate forcing, air quality, water availability and seasonal atmospheric forecasting. Despite advances in land surface modeling, land surface model performance is often limited because of errors related to initial and boundary conditions, model structure, and parameters. Data assimilation (DA) techniques combined with an expanding network of earth system observations present an opportunity to reduce these errors and improve simulations. Here, we emphasize the implementation of tools and approaches to overcome challenges related to land DA to constrain carbon and water cycling. In particular, we discuss the implementation of adaptive inflation to modify ensemble spread in response to time-varying networks of gridded observations. We also discuss methods to generate ensemble spread through boundary condition (meteorology) forcing that can be applied to site-level applications. Next, we describe the application of vertical localization upon surface soil moisture observations, and forward operators specifically designed for the assimilation of snow and solar-induced fluorescence observations. Finally, we discuss the potential benefit of a quantile conserving filter used to update bounded quantities (state or parameter values).

Brett Raczka↗

The Relative Importance of Random Error and Observation Frequency in Detecting Trends in Upper Tropospheric Water Vapor

Recent published work assessed the amount of time to detect trends in atmospheric water vapor over the coming century. We address the same question and conclude that under the most optimistic scenarios and assuming perfect data (i.e., observations with no measurement uncertainty) the time to detect trends will be at least 12 years at approximately 200 hPa in the upper troposphere. Our times to detect trends are therefore shorter than those recently reported and this difference is affected by data sources used, method of processing the data, geographic location and pressure level in the atmosphere where the analyses were performed. We then consider the question of how instrumental uncertainty plays into the assessment of time to detect trends. We conclude that due to the high natural variability in atmospheric water vapor, the amount of time to detect trends in the upper troposphere is relatively insensitive to instrumental random uncertainty and that it is much more important to increase the frequency of measurement than to decrease the random error in the measurement. This is put in the context of international networks such as the Global Climate Observing System (GCOS) Reference Upper-Air Network (GRUAN) and the Network for the Detection of Atmospheric Composition Change (NDACC) that are tasked with developing time series of climate quality water vapor data.

Whiteman, David N.↗

An Overview of the Meteorological Instrumentation Utilized for the Design and Operations of Space Launch Vehicles

One of the first hurdles a space vehicle must overcome is the ability to successfully traverse Earth’s atmosphere. In order to achieve this goal, there must exist both climatological and real-time atmospheric data from the surface to the Karman line. The Natural Environments Branch at the National Aeronautics and Space Administration’s Marshall Space Flight Center utilizes both traditional and specialized meteorological instrumentation to aide in both the design and operations of launch vehicles. Weather balloons measuring thermodynamic and wind data from 0 - 70 kft are an example of the more traditional instrumentation. While the Tropospheric Doppler Radar Weather Profiler that measures winds from roughly 5 kft – 60 kft every five minutes is an example of a more specialized instrument. Other instruments include: 915 MHz Doppler Radar Wind Profilers, rain gauges, meteorological towers, lightning detection networks, Automated Weather Observing System stations, Mobile Launcher weather stations, and more. This presentation will give a high-level overview of which instruments are utilized, how the data are acquired, and how the data are ultimately used in design and/or operations.

Nathan L. Curtis↗

Improving the Representation of Land Surface Processes using the Data Assimilation Research Testbed (DART)

The land surface is a critical part of the earth system as processes related to water, carbon, energy and nitrogen cycling have important implications for climate forcing, air quality, water availability and seasonal atmospheric forecasting. Despite advances in land surface modeling, land surface model performance is often limited because of errors related to initial and boundary conditions, model structure, and parameters. Data assimilation (DA) techniques combined with an expanding network of earth system observations present an opportunity to reduce these errors and improve simulations. Here we apply an Ensemble Kalman Filter DA system as part of the Data Assimilation Research Testbed to a variety of land surface simulations. First, we describe the use of remotely sensed biomass observations to provide improved simulations of plant phenology, carbon and water cycling for regions highly sensitive to climate change (Western US, China, and Arctic). We discuss approaches to account for systemic biases between models and observations, including the use of spatially-varying adaptive ensemble inflation as an alternative approach to re-scaling soil moisture observations. Finally, we discuss a strategy to incorporate complementary observations (snow water equivalent, solar-induced fluorescence) to better constrain the representation of carbon and water cycling across complex terrain.

DART↗

High-speed, cross-continental networks - A necessity

The networking requirements that the Earth Observing System (EOS) program has levied on NASA and the national and international operational networking communities is addressed. The objectives of the EOS program are listed and include the development and operation of an observing system to acquire essential, global earth science data on a long-term, sustained basis and in a manner which maximizes the scientific utility of the data and simplifies data analysis. Network design issues are also discussed, including protocol selection, the Transport Control Protocol/Internet Protocol suite, the Open Systems Interconnect network suite, and the internet evolution. Open and closed network issues are also discussed. A number of networks now in place are assessed including NASNet, and ESNet. These offer possible options and/or solutions to be considered by the NASA Headquarters EOS Data and Information Systems Program.

Wong, C. M.↗

AstroNet: A Tool Set for Simultaneous, Multi-Site Observations of Astronomical Objects

Earth-based, fully automatic "robotic" telescopes have been in routine operation for a number of years. As their number grows and their distribution becomes global, increasing attention is being given to forming networks of various sorts that will allow them, as a group, to make observations 24 hours a day in both hemispheres. We have suggested that telescopes based in space be part of this network. We further suggested that any telescope on this network be capable of asking, almost in real time, that other robotic telescopes perform support observations for them. When a target of opportunity required support observations, the system would determine which telescope(s) in the network would be most appropriate to make the observations and formulate a request to do so. Because the network would be comprised of telescopes located in widely distributed regions, this system would guarantee continuity of observations This report summarizes our efforts under this contract. We proposed to develop a set of data collection and display tools to aid simultaneous observation of astronomical targets from a number of observing sites. We planned to demonstrate the usefulness of this toolset for simultaneous multi-site observation of astronomical targets. Possible candidates or the proposed demonstration included the Extreme Ultraviolet Explorer (EUVE), International Ultraviolet Explorer (IUE), and ALEXIS, sounding rocket experiments. Ground-based observatories operated by the University of California, Berkeley, the Jet Propulsion Laboratory, and Fairborn Observatory in Mesa, Arizona were to be used to demonstrate the proposed concept. Although the demonstration was to have involved astronomical investigations, the tools were to have been applicable to a large number of scientific disciplines. The software tools and systems developed as a result of the work were to have been made available to the scientific community.

Chakrabarti, Supriya↗

Enhancement of Distribution System State Estimation Using Pruned Physics-Aware Neural Networks

Realizing complete observability in the three-phase distribution system remains a challenge that hinders the implementation of classic state estimation algorithms. In this paper, a new method, called the pruned physics-aware neural network (P2N2), is developed to improve the voltage estimation accuracy in the distribution system. The method relies on the physical grid topology, which is used to design the connections between different hidden layers of a neural network model. To verify the proposed method, a numerical simulation based on one- year smart meter data of load consumptions for three-phase power flow is developed to generate the measurement and voltage state data. The IEEE 123-node system is selected as the test network to benchmark the proposed algorithm against the classic weighted least squares (WLS). Numerical results show that P2N2 outperforms WLS in terms of data redundancy and estimation accuracy.

distribution system state estimation↗

Comparison of ScaRaB, GOES 8, Aircraft, and Surface Observations of the Absorption of Solar Radiation by Clouds

Data obtained by the Scanner for Radiation Budget (ScaRaB) instrument on the Meteor 3 satellite have been analyzed and compared to satellite (GOES 8), aircraft (Radiation Measurement System, RAMS), and surface (Baseline Solar Radiation Network (BSRN), Solar and Infrared Observations System (SIROS), and RAMS) measurements of irradiance obtained during the Atmospheric Radiation Measurements Enhanced Shortwave Experiment (ARESE). It is found that the ScaRaB data covering the period from March 1994 to February 1995 (the instrument's operational lifetime) indicate excess absorption of solar radiation by the cloudy atmosphere in agreement with previous aircraft, surface, and GOES 8 results. The full ScaRaB data set combined with BSRN and SIROS surface observations gives an average all-sky absorptance of 0.28. The GOES 8 data set combined with RAMS surface observations gives an average all-sky absorptance of 0.26. The aircraft data set (RAMS) gives a mean all-sky absorptance of 0.24 (for the column between 0.5 and 13 km).

Pope, Shelly K.↗

Application of Multilayer Feedforward Neural Networks to Precipitation Cell-Top Altitude Estimation

The use of passive 118-GHz O2 observations of rain cells for precipitation cell-top altitude estimation is demonstrated by using a multilayer feed forward neural network retrieval system. Rain cell observations at 118 GHz were compared with estimates of the cell-top altitude obtained by optical stereoscopy. The observations were made with 2 4 km horizontal spatial resolution by using the Millimeter-wave Temperature Sounder (MTS) scanning spectrometer aboard the NASA ER-2 research aircraft during the Genesis of Atlantic Lows Experiment (GALE) and the COoperative Huntsville Meteorological EXperiment (COHMEX) in 1986. The neural network estimator applied to MTS spectral differences between clouds, and nearby clear air yielded an rms discrepancy of 1.76 km for a combined cumulus, mature, and dissipating cell set and 1.44 km for the cumulus-only set. An improvement in rms discrepancy to 1.36 km was achieved by including additional MTS information on the absolute atmospheric temperature profile. An incremental method for training neural networks was developed that yielded robust results, despite the use of as few as 56 training spectra. Comparison of these results with a nonlinear statistical estimator shows that superior results can be obtained with a neural network retrieval system. Imagery of estimated cell-top altitudes was created from 118-GHz spectral imagery gathered from CAMEX, September through October 1993, and from cyclone Oliver, February 7, 1993.

Spina, Michelle S.↗

Multisource Data Fusion Outage Location in Distribution Systems via Probabilistic Graphical Models

Efficient outage location is critical to enhancing the resilience of power distribution systems. However, accurate outage location requires combining massive evidence received from diverse data sources, including smart meter (SM) last gasp signals, customer trouble calls, social media messages, weather data, vegetation information, and physical parameters of the network. This is a computationally complex task due to the high dimensionality of data in distribution grids. In this paper, we propose a multi-source data fusion approach to locate outage events in partially observable distribution systems using Bayesian networks (BNs). A novel aspect of the proposed approach is that it takes multi-source evidence and the complex structure of distribution systems into account using a probabilistic graphical method. Our method can radically reduce the computational complexity of outage location inference in high-dimensional spaces. The graphical structure of the proposed BN is established based on the network’s topology and the causal relationship between random variables, such as the states of branches/customers and evidence. Utilizing this graphical model, accurate outage locations are obtained by leveraging a Gibbs sampling (GS) method, to infer the probabilities of de-energization for all branches. Compared with commonly-used exact inference methods that have exponential complexity in the size of the BN, GS quantifies the target conditional probability distributions in a timely manner. As a result, a case study of several real-world distribution systems is presented to validate the proposed method.

24 POWER TRANSMISSION AND DISTRIBUTION↗