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At least 37 records · Page 2

Direct nonparametric multimessenger constraints on the equation of state of cold dense nuclear matter

We utilize the now substantial amount of astrophysical observations of neutron stars (NSs), along with perturbative quantum chromodynamics (pQCD) calculations at high density, to directly constrain the NS equation of state (EOS). To this end, we construct nonparametric EOS priors by using Gaussian processes trained on 75 EOSs, which include models with either hadrons, hyperons, or quarks at high densities. We create a prior using the full EOS sample (model agnostic), and one prior for each EOS family to test model discrimination. We introduce a novel inference approach, which allows the simultaneous sampling of intrinsic and extrinsic parameters of binary NS mergers, as well as a nonparametric equation of state. We showcase this method in a Bayesian updating scheme by first performing a complete analysis of the binary NS merger event GW170817 with minimal assumptions, and sequentially adding information from x-ray and radio NS observations, along with pQCD calculations. Besides providing standard constraints, such as the pressure at twice nuclear saturation density 𝑝⁡(2⁢𝜌 sat ) = 4.3$^{+0.6}_{−0.6}$ × 10 34 dyne/cm 2 , at 95% confidence level, for the model agnostic prior, our methodology shows how the choice of EOS families used in conditioning changes the inferred astrophysical properties of the EOS, namely tidal deformability and maximum supported NS mass. We find hyperonic priors predicting higher tidal deformabilities for a 1.4⁢𝑀 ⊙ NS, and hadronic priors being preferred by the considered astrophysical data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Nonparametric Bayesian Modeling for Automated Database Schema Matching

The problem of merging databases arises in many government and commercial applications. Schema matching, a common first step, identifies equivalent fields between databases. We introduce a schema matching framework that builds nonparametric Bayesian models for each field and compares them by computing the probability that a single model could have generated both fields. Our experiments show that our method is more accurate and faster than the existing instance-based matching algorithms in part because of the use of nonparametric Bayesian models.

Bayesian↗

Nonparametric Method for Genomics-Based Prediction of Performance of Quantitative Traits Involving Epistasis in Plant Breeding

Genomic selection (GS) procedures have proven useful in estimating breeding value and predicting phenotype with genome-wide molecular marker information. However, issues of high dimensionality, multicollinearity, and the inability to deal effectively with epistasis can jeopardize accuracy and predictive ability. We, therefore, propose a new nonparametric method, pRKHS, which combines the features of supervised principal component analysis (SPCA) and reproducing kernel Hilbert spaces (RKHS) regression, with versions for traits with no/low epistasis, pRKHS-NE, to high epistasis, pRKHS-E. Instead of assigning a specific relationship to represent the underlying epistasis, the method maps genotype to phenotype in a nonparametric way, thus requiring fewer genetic assumptions. SPCA decreases the number of markers needed for prediction by filtering out low-signal markers with the optimal marker set determined by cross-validation. Principal components are computed from reduced marker matrix (called supervised principal components, SPC) and included in the smoothing spline ANOVA model as independent variables to fit the data. The new method was evaluated in comparison with current popular methods for practicing GS, specifically RR-BLUP, BayesA, BayesB, as well as a newer method by Crossa et al., RKHS-M, using both simulated and real data. Results demonstrate that pRKHS generally delivers greater predictive ability, particularly when epistasis impacts trait expression. Beyond prediction, the new method also facilitates inferences about the extent to which epistasis influences trait expression.

54 ENVIRONMENTAL SCIENCES↗

Preliminary Results on Applying Nonparametric Clustering and Bayesian Consensus Clustering Methods to Multimodal Data

In this report, we present preliminary research into nonparametric clustering methods for multi-source imagery data and quantifying the performance of these models. In many domain areas, data sets do not necessarily follow well-defined and well-known probability distributions, such as the normal, gamma, and exponential. This is especially true when combining data from multiple sources describing a common set of objects (which we call multimodal analysis), where the data in each source can follow different distributions and need to be analyzed in conjunction with one another. This necessitates nonparametric density estimation methods, which allow the data to better dictate the distribution of the data. One prominent example of multimodal analysis is multimodal image analysis, when we analyze multiple images taken using different radar systems of the same scene of interest. We develop uncertainty analysis methods, which are inherent in the use of probabilistic models but often not taken advance of, to assess the performance of probabilistic clustering methods used for analyzing multimodal images. This added information helps assess model performance and how much trust decision-makers should have in the obtained analysis results. The developed methods illustrate some ways in which uncertainty can inform decisions that arise when designing and using machine learning models.

42 ENGINEERING↗

Excalibur: A Nonparametric, Hierarchical Wavelength Calibration Method for a Precision Spectrograph

Excalibur is a nonparametric, hierarchical framework for precision wavelength calibration of spectrographs. It is designed with the needs of extreme-precision radial-velocity (EPRV) instruments in mind, which require calibration or stabilization to better than 10{sup −4} pixels. Instruments vary along only a few dominant degrees of freedom, especially EPRV instruments that feature highly stabilized optical systems and detectors. Excalibur takes advantage of this property by using all calibration data to construct a low-dimensional representation of all accessible calibration states for an instrument. Excalibur also takes advantage of laser-frequency combs or etalons, which generate a dense set of stable calibration points. This density permits the use of a nonparametric wavelength solution that can adapt to any instrument or detector oddities better than parametric models, such as a polynomial. We demonstrate the success of this method with data from the Extreme Precision Spectrograph (EXPRES), which uses a laser-frequency comb. When wavelengths are assigned to laser comb lines using excalibur, the rms of the residuals is about one-fifth that of wavelengths assigned using polynomial fits to individual exposures. Radial-velocity measurements of HD 34411 show a reduction in rms scatter over a 10 month time baseline from 1.17 to 1.05 m s{sup −1}.

47 OTHER INSTRUMENTATION↗

A Nonparametric Method for the Inference of Halo Occupation Distributions

The galaxy–halo connection traces processes by which galaxies form and evolve. The halo occupation distribution (HOD) describes the relationship between galaxies and their host dark matter haloes. Measurements of the galaxy two-point correlation function (2PCF) allow us to extract information about the HODs of observed galaxy samples. Several parametric HOD models have been proposed in the literature, but the choice of parameterization restricts the space of possible HODs. To resolve this issue, we introduce a nonparametric HOD fitting method in which we train an emulator to learn the mappings among the galaxy 2PCF, physical properties used to select galaxy samples, and the HOD, all obtained from simulated past light cones constructed with the Santa Cruz semianalytic model. Implementing this emulator within a likelihood analysis framework, we derive constraints on the HOD of a galaxy sample when provided with a measurement of its 2PCF. Using the emulator to accelerate likelihood evaluations, we test the nonparametric HOD approach on a set of 2PCFs for mock galaxy samples drawn from the TNG100-1 simulation and selected above threshold values of stellar mass and star formation rate. Our framework is able to recover TNG100-1 HODs within 0.2 dex. We use the TNG100-1 mocks to tune the reported uncertainties to estimate those expected in the analysis of observations. Comparing to parametric HOD modelling routines applied to the same mock galaxy samples, our approach consistently infers the HOD with comparable or greater precision and accuracy.

Kennedy, Jacob [Rutgers Univ., Piscataway, NJ (Uni↗

A comparative study of nonparametric methods for pattern recognition

The applied research discussed in this report determines and compares the correct classification percentage of the nonparametric sign test, Wilcoxon's signed rank test, and K-class classifier with the performance of the Bayes classifier. The performance is determined for data which have Gaussian, Laplacian and Rayleigh probability density functions. The correct classification percentage is shown graphically for differences in modes and/or means of the probability density functions for four, eight and sixteen samples. The K-class classifier performed very well with respect to the other classifiers used. Since the K-class classifier is a nonparametric technique, it usually performed better than the Bayes classifier which assumes the data to be Gaussian even though it may not be. The K-class classifier has the advantage over the Bayes in that it works well with non-Gaussian data without having to determine the probability density function of the data. It should be noted that the data in this experiment was always unimodal.

Hahn, S. F.↗

Nonparametric maximum likelihood estimation of probability densities by penalty function methods

When it is known a priori exactly to which finite dimensional manifold the probability density function gives rise to a set of samples, the parametric maximum likelihood estimation procedure leads to poor estimates and is unstable; while the nonparametric maximum likelihood procedure is undefined. A very general theory of maximum penalized likelihood estimation which should avoid many of these difficulties is presented. It is demonstrated that each reproducing kernel Hilbert space leads, in a very natural way, to a maximum penalized likelihood estimator and that a well-known class of reproducing kernel Hilbert spaces gives polynomial splines as the nonparametric maximum penalized likelihood estimates.

Demontricher, G. F.↗

Nonparametric probability density estimation by optimization theoretic techniques

Two nonparametric probability density estimators are considered. The first is the kernel estimator. The problem of choosing the kernel scaling factor based solely on a random sample is addressed. An interactive mode is discussed and an algorithm proposed to choose the scaling factor automatically. The second nonparametric probability estimate uses penalty function techniques with the maximum likelihood criterion. A discrete maximum penalized likelihood estimator is proposed and is shown to be consistent in the mean square error. A numerical implementation technique for the discrete solution is discussed and examples displayed. An extensive simulation study compares the integrated mean square error of the discrete and kernel estimators. The robustness of the discrete estimator is demonstrated graphically.

Scott, D. W.↗

Nonparametric analysis of Minnesota spruce and aspen tree data and LANDSAT data

The application of nonparametric methods in data-intensive problems faced by NASA is described. The theoretical development of efficient multivariate density estimators and the novel use of color graphics workstations are reviewed. The use of nonparametric density estimates for data representation and for Bayesian classification are described and illustrated. Progress in building a data analysis system in a workstation environment is reviewed and preliminary runs presented.

Scott, D. W.↗

Quantification of model error via an interval model with nonparametric error bound

The quantification of model uncertainty is becoming increasingly important as robust control is an important tool for control system design and analysis. This paper presents an algorithm that effectively characterizes the model uncertainty in terms of parametric and nonparametric uncertainties. The algorithm utilizes the frequency domain model error which is estimated from the spectra of output error and input data. The parametric uncertainty is represented as an interval transfer function while the nonparametric uncertainty is bounded by a designed error bound transfer function. Both discrete and continuous systems are discussed in this paper. The algorithm is applied to the Mini-Mast example, and the detail analysis is given.

Lew, Jiann-Shiun↗

Nonparametric identification experiment

The following constitutes a summary of this paper: on-orbit identification methodology starts with nonparametric techniques for a priori system identification; development of the nonparametric identification and model determination experiment software has been completed; the validation experiments to be performed on the JPL Control and Identification Technology Validation Laboratory have been designed.

Yam, Yeung↗

NONPARAMETRIC EMPIRICAL BAYES ESTIMATION THROUGH DECONVOLUTION IN PROBABILISTIC RISK ANALYSIS

The advent of Markov Chain Monte Carlo (MCMC) simulations and availability of open source software made full hierarchical Bayesian analysis tractable and a popular choice in parameter estimation for Probabilistic Risk Assessment (PRA). However, despite its theoretical attractiveness, the hierarchical Bayesian analysis is not without its problems. Two of the most prominent practical difficulties in applying hierarchical Bayes analysis in practice to analyze source-to-source variability, for example, is its sensitivity to the selection of the first-stage prior and dependence of the rate of convergence on the selection of the first-stage prior. The first-stage prior in hierarchical Bayesian analysis is usually assumed having a parametric form, often conjugate to the likelihood function (aleatory model). To facilitate convergence for hierarchical Bayes models, the first-stage prior is frequently set through empirical Bayes estimate, which can use available historical data to find the parameters of the first-stage prior. The paper discusses a new nonparametric empirical Bayes estimation and compare it to several well-known parametric estimates such as method of moments and maximum likelihood. The new nonparametric technique exploits the prior predictive distribution as integral equation and proceeds to solve it with respect to prior assuming the sampling data distribution and aleatory model are available. The discussion covers topics such as selection of aleatory model for future data, selection of regularization parameter, and density estimation for historical data. For comparison, the paper is using contrived as well as real-world data from utilities. Utilities data represent failure data with Poisson distribution used for aleatory model.

97 MATHEMATICS AND COMPUTING↗

InClass nets: independent classifier networks for nonparametric estimation of conditional independence mixture models and unsupervised classification

Abstract Conditional independence mixture models (CIMMs) are an important class of statistical models used in many fields of science. We introduce a novel unsupervised machine learning technique called the independent classifier networks (InClass nets) technique for the nonparameteric estimation of CIMMs. InClass nets consist of multiple independent classifier neural networks (NNs), which are trained simultaneously using suitable cost functions. Leveraging the ability of NNs to handle high-dimensional data, the conditionally independent variates of the model are allowed to be individually high-dimensional, which is the main advantage of the proposed technique over existing non-machine-learning-based approaches. Two new theorems on the nonparametric identifiability of bivariate CIMMs are derived in the form of a necessary and a (different) sufficient condition for a bivariate CIMM to be identifiable. We use the InClass nets technique to perform CIMM estimation successfully for several examples. We provide a public implementation as a Python package called RainDancesVI.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

A Nonparametric Bayesian Framework for Short-Term Wind Power Probabilistic Forecast

To improve the energy system resilience and economic efficiency, the wind power as a renewable energy starts to be deeply integrated into smart power grids. However, the wind power forecast uncertainty brings operational challenges. In order to provide a reliable guidance on operational decisions, in this paper, we propose a short-term wind power probabilistic forecast. Specifically, to model the rich dynamic behaviors of underlying physical wind power stochastic process occurring in various meteorological conditions, we first introduce an infinite Markov switching autoregressive model. This nonparametric time series model can capture the important properties in the real world data to improve the prediction accuracy. Then, given finite historical data, the posterior distribution of flexible forecast model can correctly quantify the model estimation uncertainty. Built on it, we develop the posterior predictive distribution to rigorously quantify the overall forecasting uncertainty accounting for both inherent stochastic uncertainty and model estimation error. Furthermore, the proposed approach can provide accurate and reliable short-term wind power probabilistic forecast, which can be used to support smart power grids real-time risk management.

17 WIND ENERGY↗

A Bayesian nonparametric analysis for zero-inflated multivariate count data with application to microbiome study

High-throughput sequencing technology has enabled researchers to profile microbial communities from a variety of environments, but analysis of multivariate taxon count data remains challenging. Here, we develop a Bayesian nonparametric (BNP) regression model with zero inflation to analyse multivariate count data from microbiome studies. A BNP approach flexibly models microbial associations with covariates, such as environmental factors and clinical characteristics. The model produces estimates for probability distributions which relate microbial diversity and differential abundance to covariates, and facilitates community comparisons beyond those provided by simple statistical tests. We compare the model to simpler models and popular alternatives in simulation studies, showing, in addition to these additional community-level insights, it yields superior parameter estimates and model fit in various settings. The model's utility is demonstrated by applying it to a chronic wound microbiome data set and a Human Microbiome Project data set, where it is used to compare microbial communities present in different environments.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Deep nonparametric estimation of operators between infinite dimensional spaces

Learning operators between infinitely dimensional spaces is an important learning task arising in machine learning, imaging science, mathematical modeling and simulations, etc. This paper studies the nonparametric estimation of Lipschitz operators using deep neural networks. Non-asymptotic upper bounds are derived for the generalization error of the empirical risk minimizer over a properly chosen network class. Under the assumption that the target operator exhibits a low dimensional structure, our error bounds decay as the training sample size increases, with an attractive fast rate depending on the intrinsic dimension in our estimation. Our assumptions cover most scenarios in real applications and our results give rise to fast rates by exploiting low dimensional structures of data in operator estimation. We also investigate the influence of network structures (e.g., network width, depth, and sparsity) on the generalization error of the neural network estimator and propose a general suggestion on the choice of network structures to maximize the learning efficiency quantitatively.

97 MATHEMATICS AND COMPUTING↗

Deep Nonparametric Estimation of Operators between Infinite Dimensional Spaces

Learning operators between infinitely dimensional spaces is an important learning task arising in machine learning, imaging science, mathematical modeling and simulations, etc. This paper studies the nonparametric estimation of Lipschitz operators using deep neural networks. Non-asymptotic upper bounds are derived for the generalization error of the empirical risk minimizer over a properly chosen network class. Under the assumption that the target operator exhibits a low dimensional structure, our error bounds decay as the training sample size increases, with an attractive fast rate depending on the intrinsic dimension in our estimation. Our assumptions cover most scenarios in real applications and our results give rise to fast rates by exploiting low dimensional structures of data in operator estimation. We also investigate the influence of network structures (e.g., network width, depth, and sparsity) on the generalization error of the neural network estimator and propose a general suggestion on the choice of network structures to maximize the learning efficiency quantitatively.

97 MATHEMATICS AND COMPUTING↗