Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “living matter”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 37 records · Page 2

Improved methods for counting bacteria in physiological fluids

Bacterial population detection is based on detection of adenosine triphosphate (ATP), chemical present in all living matter. Amount of ATP in sample, after chemically removing all nonbacterial ATP, is directly related to bacterial population. Sensitivity is improved by concentration step; specificity is improved by lowering pH of solution.

Picciolo, G. L.↗

Phycomyces in space: A problem in bioengineering

Sustaining life with total automation is a difficult problem for GAS canisters. The length of time between setting the experiment and flight, the conditions of a completely sealed container, no guarantee on launch delay, orientation and the possibility of contamination all tend to exclude experiments with living matter. This experiment examines the growth of a nontoxic, everyday fungus, Phycomyces, in a microgravity environment. Data from this experiment will help define the mechanism by which plants determine the direction of gravity. The bioengineering problems were solved only after numerous tests and design changes. Phycomyces normally have a shelf life of approximately one week. Storing the fungus for two months, activating the fungus for growth and precise timing were the major obstacles. Solutions were found for storage by drying the fungus spores onto pieces of filter paper. Activation occurs when this filter paper is dropped onto the growth medium, via a solenoid system. The problem of timing is partially solved by growing more than one chamber of the fungus at different time intervals. This experiment proves that the simpler a design, the better it works.

Schneringer, Julie A.↗

The Influence of Sound Cues on the Maintenance of Temporal Organization in the Sprague-Dawley Rat

Temporal organization is a fundamental property of living matter. From single cells to complex animals including man, most physiological systems undergo daily periodic changes in concert with environmental cues (e.g., light, temperature etc.). It is known that pulsed Environmental synchronizers, zeitgebers, (e.g. light) can modify rhythm parameters. Rhythm stability is a necessary requirement for most animal experiments. The extent to which sound can influence the circadian system of laboratory rats is poorly understood. This has implications to animal habitats in the novel environments of the Space-Laboratory or Space Station. A series of three white noise (88+/-0.82 db) zeitgeber experiments were conducted (n=6/experiment).The sound cue was introduced in the circadian free-running phase (DD-NQ) and in one additional case sound was added to the usual photoperiod (12L:12D) to determine masking effects. Circadian rhythm parameters of drinking frequency, feeding frequency, and gross locomotor activity were continuously monitored. Data analysis for these studies included macroscopic and microscopic methods. Raster plots to visually detect entrainment versus free-running period, were plotted for each animal, for all three parameters, during all sound perturbation tested. These data were processed through a series of detrending (robust locally weighted regression analyses) and complex demodulation analyses. In summary, these findings show that periodic "white" noise "influences" the rats circadian system but does not "entrain" the feeding, drinking or locomotor activity rhythms.

Winget, C. M.↗

Machine Phase Fullerene Nanotechnology: 1996

NASA has used exotic materials for spacecraft and experimental aircraft to good effect for many decades. In spite of many advances, transportation to space still costs about $10,000 per pound. Drexler has proposed a hypothetical nanotechnology based on diamond and investigated the properties of such molecular systems. These studies and others suggest enormous potential for aerospace systems. Unfortunately, methods to realize diamonoid nanotechnology are at best highly speculative. Recent computational efforts at NASA Ames Research Center and computation and experiment elsewhere suggest that a nanotechnology of machine phase functionalized fullerenes may be synthetically relatively accessible and of great aerospace interest. Machine phase materials are (hypothetical) materials consisting entirely or in large part of microscopic machines. In a sense, most living matter fits this definition. To begin investigation of fullerene nanotechnology, we used molecular dynamics to study the properties of carbon nanotube based gears and gear/shaft configurations. Experiments on C60 and quantum calculations suggest that benzyne may react with carbon nanotubes to form gear teeth. Han has computationally demonstrated that molecular gears fashioned from (14,0) single-walled carbon nanotubes and benzyne teeth should operate well at 50-100 gigahertz. Results suggest that rotation can be converted to rotating or linear motion, and linear motion may be converted into rotation. Preliminary results suggest that these mechanical systems can be cooled by a helium atmosphere. Furthermore, Deepak has successfully simulated using helical electric fields generated by a laser to power fullerene gears once a positive and negative charge have been added to form a dipole. Even with mechanical motion, cooling, and power; creating a viable nanotechnology requires support structures, computer control, a system architecture, a variety of components, and some approach to manufacture. Additional information is contained within the original extended abstract.

Globus, Al↗

Simulation of TGF-Beta Activation by Low-Dose HZE Radiation in a Cell Culture

High charge (Z) and energy (E) (HZE) nuclei comprised in the galactic cosmic rays are main contributors to space radiation risk. They induce many lesions in living matter such as non-specific oxidative damage and the double-strand breaks (DSBs), which are considered key precursors of early and late effects of radiation. There is increasing evidence that cells respond collectively rather than individually to radiation, suggesting the importance of cell signaling1. The transforming growth factor (TGF ) is a signaling peptide that is expressed in nearly all cell type and regulates a large array of cellular processes2. TGF have been shown to mediate cellular response to DNA damage3 and to induce apoptosis in non-irradiated cells cocultured with irradiated cells4. TFG molecules are secreted by cells in an inactive complex known as the latency-associated peptide (LAP). TGF is released from the LAP by a conformational change triggered by proteases, thrombospondin-1, integrins, acidic conditions and .OH radical5. TGF then binds to cells receptors and activates a cascade of events mediated by Smad proteins6, which might interfere with the repair of DNA. Meanwhile, increasingly sophisticated Brownian Dynamics (BD) algorithms have appeared recently in the literature7 and can be applied to study the interaction of molecules with receptors. These BD computer models have contributed to the elucidation of signal transduction, ligand accumulation and autocrine loops in the epidermal growth factor (EGF) and its receptor (EFGR) system8. To investigate the possible roles of TGF in an irradiated cell culture, our Monte-Carlo simulation codes of the radiation track structure9 will be used to calculate the activation of TFG triggered by .OH produced by low doses of HZE ions. The TGF molecules will then be followed by a BD algorithm in a medium representative of a cell culture to estimate the number of activated receptors.

Plante, Ianik↗

3D Biomimetic Platform

An apparatus and method that utilizes a radiation source and a simulated microgravity to provide combined stressors. The response of cells/bacteria/viruses and/or other living matter to the combined stressors can be evaluated to predict the effects of extended space missions. The apparatus and method can also be utilized to study diseases and to develop new treatments and vaccinations.

Scott Carnell, Lisa A.↗

Chemical, Mineralogical, and Physical Properties of Martian Dust and Soil

Global and regional dust storms on Mars have been observed from Earth-based telescopes, Mars orbiters, and surface rovers and landers. Dust storms can be global and regional. Dust is material that is suspended into the atmosphere by winds and has a particle size of 1-3 micrometer. Planetary scientist refer to loose unconsolidated materials at the surface as "soil." The term ''soil'' is used here to denote any loose, unconsolidated material that can be distinguished from rocks, bedrock, or strongly cohesive sediments. No implication for the presence or absence of organic materials or living matter is intended. Soil contains local and regional materials mixed with the globally distributed dust by aeolian processes. Loose, unconsolidated surface materials (dust and soil) may pose challenges for human exploration on Mars. Dust will no doubt adhere to spacesuits, vehicles, habitats, and other surface systems. What will be the impacts on human activity? The objective of this paper is to review the chemical, mineralogical, and physical properties of the martian dust and soil.

Ming, D. W.↗

Hyperstealth dark matter and long-lived particles

A new dark matter candidate is proposed that arises as the lightest baryon from a confining 𝑆⁢𝑈⁡(𝑁) gauge theory which equilibrates with the Standard Model only through electroweak interactions. Surprisingly, this candidate can be as light as a few GeV. The lower bound arises from the intersection of two competing requirements: (i) the equilibration sector of the model must be sufficiently heavy, at least several TeV, to avoid bounds from colliders, and (ii) the lightest dark meson (that may be the dark 𝜂′, 𝜎, or the lightest glueball) has suppressed interactions with the SM and must decay before big bang nucleosynthesis. The low-energy dark sector consists of one flavor that is electrically neutral and an almost electroweak singlet. The dark matter candidate is the lightest baryon consisting of 𝑁 of these light flavors leading to a highly suppressed elastic scattering rate with the Standard Model (SM). The equilibration sector consists of vectorlike dark quarks that transform under the electroweak group, ensuring that the dark sector can reach thermal equilibrium with the SM in the early Universe. The lightest dark meson lifetimes vary between 10 −3 ≲ 𝑐⁢𝜏 ≲ 10 7 m, providing an outstanding target for LHC production and experimental detection. We delineate the interplay between the lifetime of the light mesons, the suppressed direct detection cross section of the lightest baryon, and the scale of equilibration sector that can be probed at the LHC.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Constraints on dark matter scattering with long lived mediators from observations of the Sun with the Fermi Large Area Telescope

The Sun represents a promising target for indirect dark matter searches, as dark matter particles from the Galactic halo can be gravitationally trapped in its core or in external orbits, and their annihilations can lead to final states with standard model particles that are able to reach the Earth. In this work we have considered a scenario in which dark matter particles can annihilate into pairs of long-lived mediators, which in turn can escape from the Sun and decay into pairs of gamma rays or into the bb̅, τ+τ-, μ+μ- channels, with the production of gamma rays in the final states. All these processes are expected to yield an excess in the energy spectrum of gamma rays towards the Sun. We have therefore analyzed the data collected by the Fermi Large Area Telescope during its first 13.5 years of operation, searching for possible excesses in the solar gamma-ray spectrum. Since no statistically significant excess is found, we have set constraints on the dark matter-nucleon scattering cross sections in both the spin-dependent and spin-independent cases. For all the mediator decay channels explored and for dark matter masses between a few GeV/c 2 and 1 TeV/c 2 , we have found that the upper limits on the spin-dependent and spin-independent cross sections are in the ranges from 10 -45 to 10 -39 cm 2 and from 10 -47 up to 10 -42 cm 2 , respectively.

79 ASTRONOMY AND ASTROPHYSICS↗

Expected sensitivity of the Light Dark Matter eXperiment to long-lived dark photons and axion-like particles

The Light Dark Matter eXperiment (LDMX) is an electron-beam fixed-target experiment primarily designed to achieve world-leading, model-independent sensitivity to sub-GeV dark matter particles. LDMX aims to identify dark sector particle production through the detection of events with substantial missing energy and momentum, a signature of invisible particles escaping detection. Beyond this primary objective, LDMX offers a complementary search strategy for long-lived, visibly decaying particles, such as dark photons and axion-like particles. We present the first detailed evaluation of the ability of LDMX to identify visibly decaying, long-lived particles that couple to electrons using a detailed simulation, based on the Geant 4-toolkit, that incorporates realistic detection efficiencies and background levels. We demonstrate that LDMX can achieve a sensitivity that is competitive with other experiments that are currently running. The models explored in this paper are distinct and complementary to those probed in the LDMX flagship missing-momentum analysis. Through searching for both invisible dark matter and visibly decaying long-lived signatures, LDMX will significantly advance the search for light dark matter and provide a broad exploration of the sub-GeV dark sector.[graphic not available: see fulltext]

Akesson, Torsten [Lund U.] (ORCID:0000000341415408↗

Phase Separation, Capillarity, and Odd-Surface Flows in Chiral Active Matter

Active phase separations evade canonical thermodynamic descriptions and have thus challenged our understanding of coexistence and interfacial phenomena. Considerable progress has been made towards a nonequilibrium theoretical description of these traditionally thermodynamic concepts. Spatial parity symmetry is conspicuously assumed in much of this progress, despite the ubiquity of chirality in experimentally realized systems. Here, in this Letter, we derive a theory for the phase coexistence and interfacial fluctuations of a system that microscopically violates spatial parity. We find suppression of the phase separation as chirality is increased as well as the development of steady-state currents tangential to the interface dividing the phases. These odd flows are irrelevant to stationary interfacial properties, with stability, capillary fluctuations, and surface area minimization determined entirely by the capillary surface tension. Using large-scale Brownian dynamics simulations, we find excellent agreement with our theoretical scaling predictions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Pattern formation and flocking for particles near the jamming transition on resource gradient substrates

Here, we numerically examine a bidisperse system of active and passive particles coupled to a resource substrate. The active particles deplete the resource at a fixed rate and move toward regions with higher resources, while all of the particles interact sterically with each other. We show that at high densities, this system exhibits a rich variety of pattern-forming phases along with directed motion or flocking as a function of the relative rates of resource absorption and consumption as well as the active to passive particle ratio. These include partial phase separation into rivers of active particles flowing through passive clusters, strongly phase separated states where the active particles induce crystallization of the passive particles, mixed jammed states, and fluctuating mixed fluid phases. For higher resource recovery rates, we demonstrate that the active particles can undergo motility-induced phase separation, while at high densities, there can be a coherent flock containing only active particles or a solid mixture of active and passive particles. The directed flocking motion typically shows a transient in which the flow switches among different directions before settling into one direction, and there is a critical density below which flocking does not occur. We map out the different phases as function of system density, resource absorption and recovery rates, and the ratio of active to passive particles.

97 MATHEMATICS AND COMPUTING↗

Model-Free Measurement of Local Entropy Production and Extractable Work in Active Matter

Time-reversal symmetry breaking and entropy production are universal features of nonequilibrium phenomena. Despite its importance in the physics of active and living systems, the entropy production of systems with many degrees of freedom has remained of little practical significance because the high dimensionality of their state space makes it difficult to measure. Here, in this work, we introduce a local measure of entropy production and a numerical protocol to estimate it. We establish a connection between the entropy production and extractability of work in a given region of the system and show how this quantity depends crucially on the degrees of freedom being tracked. We validate our approach in theory, simulation, and experiments by considering systems of active Brownian particles undergoing motility-induced phase separation, as well as active Brownian particles and E.coli in a rectifying device in which the time-reversal asymmetry of the particle dynamics couples to spatial asymmetry to reveal its effects on a macroscopic scale.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Self-generated electrokinetic flows from active-charged boundary patterns

We develop a hydrodynamic description of self-generated electrolyte flow in capillaries whose bounding walls feature nonuniform distributions of charge nonuniform active ionic fluxes. The hydrodynamic velocity arising in such a system has components that are forbidden by symmetry in the absence of charge and fluxes. However, when these two boundary mechanisms are simultaneously present, they can lead to a symmetry broken state where steady flows with both unidirectional and circulatory components emerge. We show that these flow states arise when modulated boundary patterns of charge and fluxes are offset by a flux-charge phase difference, which is associated with the separation between sites of their peak densities on the wall. Mismatch in diffusivity of cationic and anionic species can modify the flow states and becomes an enhancing factor when fluxes of both ion species are being produced together at the same site. We demonstrate that this mechanism can be realized with a microfluidic generator that is powered by enzyme-coated patches that catalyze reactants in the solution to produce fluxes of ions. The local ionic elevation or depletion, which disrupts a nonuniform double layer, promotes self-induced gradients yielding persistent body forces to generate bulk fluid motion. Our work quantifies a boundary-driven mechanism behind self-sustained electrolyte flow in confined environments that exists without any external bulk-imposed fields or gradients. It provides a theoretical framework for understanding the combined effect of active and charged boundaries that are relevant in biological or soft matter systems, and can be utilized in electrofluidic and iontronic applications.

active matter↗

Cosmic stability of dark matter from Pauli blocking

Why does dark matter (DM) live longer than the age of the Universe? Here we study a novel sub-eV scalar DM candidate whose stability is due to the Pauli exclusion of its fermionic decay products. We analyze the stability of the DM condensate against decays, scatterings (i.e., evaporation), and parametric resonance, delineating the viable parameter regions in which DM is cosmologically stable. In a minimal scenario in which the scalar DM decays to a pair of new exotic fermions, we find that scattering can populate an interacting thermal dark sector component to energies far above the DM mass. This self-interacting dark radiation may potentially alleviate the Hubble tensions. Furthermore, our scenario can be probed through precise measurements of the halo-mass function or the masses of dwarf spheroidal galaxies since scattering prevents the DM from becoming too dense. On the other hand, if the lightest neutrino stabilizes the DM, the cosmic neutrino background ( C ν B ) can be significantly altered from the Lambda cold dark matter prediction and thus be probed in the future by C ν B detection experiments. Published by the American Physical Society 2024

Batell, Brian↗

Active matter shepherding and clustering in inhomogeneous environments

Here, we consider a mixture of active and passive run-and-tumble disks in an inhomogeneous environment where only half of the sample contains quenched disorder or pinning. The disks are initialized in a fully mixed state of uniform density. We identify several distinct dynamical phases as a function of motor force and pinning density. At high pinning densities and high motor forces, there is a two-step process initiated by a rapid accumulation of both active and passive disks in the pinned region, which produces a large density gradient in the system. This is followed by a slower species phase separation process where the inactive disks are shepherded by the active disks into the pin-free region, forming a nonclustered fluid and producing a more uniform density with species phase separation. For higher pinning densities and low motor forces, the dynamics becomes very slow and the system maintains a strong density gradient. For weaker pinning and large motor forces, a floating clustered state appears, and the time-averaged density of the system is uniform. We illustrate the appearance of these phases in a dynamic phase diagram.

97 MATHEMATICS AND COMPUTING↗

Programming entropy production hotspots via interaction patterning

Dissipation in soft matter and living systems is highly heterogeneous, giving rise to complex local entropy production patterns. Recent work has identified the connection between local entropy production and locally extractable amount of work. This suggests that locally produced entropy can be recovered to power nanorobots and biological machines, prompting the need for efficient strategies to modulate and fine-tune local entropy production. In this work, we propose to program entropy production hotspots by leveraging local interaction patterns and test this approach in simulations of a fluid driven through a nanopore or past an obstacle. Here, the results show that patterning the surface of the pore with a repulsive patch gives rise to an entropy production hotspot around the patch, while an attractive patch leads to an entropy production cold spot. Varying the strength of the interaction and width of the patch enables modulating the hotness and extent of the hot spot. In flows past interaction patterned-obstacles, we show that the combined effects of steric hindrance and attraction allows to program a specific entropy production map, thereby opening the door to the precise powering of nanomachines.

Desgranges, Caroline [University of Massachusetts,↗

Double X/Peanut structures in barred galaxies – insights from an N -body simulation

ABSTRACT Boxy, peanut-, or X-shaped ‘bulges’ are observed in a large fraction of barred galaxies viewed in, or close to, edge-on projection, as well as in the Milky Way. They are the product of dynamical instabilities occurring in stellar bars, which cause the latter to buckle and thicken vertically. Recent studies have found nearby galaxies that harbour two such features arising at different radial scales, in a nested configuration. In this paper, we explore the formation of such double peanuts, using a collisionless N-body simulation of a pure disc evolving in isolation within a live dark matter halo, which we analyse in a completely analogous way to observations of real galaxies. In the simulation, we find a stable double configuration consisting of two X/peanut structures associated with the same galactic bar – rotating with the same pattern speed – but with different morphology, formation time, and evolution. The inner, conventional peanut-shaped structure forms early via the buckling of the bar, and experiences little evolution once it stabilizes. This feature is consistent in terms of size, strength, and morphology, with peanut structures observed in nearby galaxies. The outer structure, however, displays a strong X, or ‘bow-tie’, morphology. It forms just after the inner peanut, and gradually extends in time (within 1–1.5 Gyr) to almost the end of the bar, a radial scale where ansae occur. We conclude that, although both structures form, and are dynamically coupled to, the same bar, they are supported by inherently different mechanisms.

Ciambur, Bogdan C.↗