The role of phosphates in biochemical reactions
Structural and functional properties of phosphates in biochemical reactions, discussing linkages
Degens, E. T.↗
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Results for “linkage functionalization”
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Organic Carbon Features Identified in the Nakhla Martian Meteorite
We report, for the first time, the identification of specific carbonaceous phases, present within iddingsite alteration zones of the Nakhla meteorite that possess discrete, well defined, structurally coherent morphologies. These structures bear superficial similarity to the carbonaceous nanoglobules [1] found in primitive chondrites interplanetary dust particles, although they are an order-of-magnitude larger in size. Introduction: It has been known for many years that some members of the Martian meteorite clan contain organic matter [e.g., 2-4]. Based on both isotopic measurements [5] and circumstantial observations [4] (e.g., the similarity organic signatures present in both Antarctic finds and non-Antarctic falls) a credible argument has been made for a preterrestrial origin for the majority of these organics. The Nakhla meteorite is of particular interest in that it has been shown to contain both an acid-labile organic fraction as well as an acid-insoluble high molecular weight organic component [4]. Pyrolysis-gas chromatography-mass spectrometry of the latter component indicates it to be composed of aromatic and alkyl-aromatic functionalities bound into a macromolecule phase through ether linkages [4]. However, the spatial, textural and mineralogical associations of this carbonaceous macromolecular material have remained elusive [6].
Mckay, D. S.↗
A provisional regulatory gene network for specification of endomesoderm in the sea urchin embryo
We present the current form of a provisional DNA sequence-based regulatory gene network that explains in outline how endomesodermal specification in the sea urchin embryo is controlled. The model of the network is in a continuous process of revision and growth as new genes are added and new experimental results become available; see http://www.its.caltech.edu/~mirsky/endomeso.htm (End-mes Gene Network Update) for the latest version. The network contains over 40 genes at present, many newly uncovered in the course of this work, and most encoding DNA-binding transcriptional regulatory factors. The architecture of the network was approached initially by construction of a logic model that integrated the extensive experimental evidence now available on endomesoderm specification. The internal linkages between genes in the network have been determined functionally, by measurement of the effects of regulatory perturbations on the expression of all relevant genes in the network. Five kinds of perturbation have been applied: (1) use of morpholino antisense oligonucleotides targeted to many of the key regulatory genes in the network; (2) transformation of other regulatory factors into dominant repressors by construction of Engrailed repressor domain fusions; (3) ectopic expression of given regulatory factors, from genetic expression constructs and from injected mRNAs; (4) blockade of the beta-catenin/Tcf pathway by introduction of mRNA encoding the intracellular domain of cadherin; and (5) blockade of the Notch signaling pathway by introduction of mRNA encoding the extracellular domain of the Notch receptor. The network model predicts the cis-regulatory inputs that link each gene into the network. Therefore, its architecture is testable by cis-regulatory analysis. Strongylocentrotus purpuratus and Lytechinus variegatus genomic BAC recombinants that include a large number of the genes in the network have been sequenced and annotated. Tests of the cis-regulatory predictions of the model are greatly facilitated by interspecific computational sequence comparison, which affords a rapid identification of likely cis-regulatory elements in advance of experimental analysis. The network specifies genomically encoded regulatory processes between early cleavage and gastrula stages. These control the specification of the micromere lineage and of the initial veg(2) endomesodermal domain; the blastula-stage separation of the central veg(2) mesodermal domain (i.e., the secondary mesenchyme progenitor field) from the peripheral veg(2) endodermal domain; the stabilization of specification state within these domains; and activation of some downstream differentiation genes. Each of the temporal-spatial phases of specification is represented in a subelement of the network model, that treats regulatory events within the relevant embryonic nuclei at particular stages. (c) 2002 Elsevier Science (USA).
Non-NASA Center↗
Autopilot Servoactuator With Pressurized Detented Centering
Centering valve allows use of mechanical override in autopilot mode. Alternate system designed incorporates centering valves into four FBW servos, providing detents for reacting mechanical system forces following FBW shutdown. Required linkage hard point incorporated directly into autopilot servoactuator by centering valve assembly shown. All components in this functional hydraulic schematic usually present in contemporary aircraft flight-control-system autopilot servoactuators, with exception of centering valve. Centering valve, which serves as hard-point linkage for mechanical system forces, incorporated directly into flight control system.
Aring, J. A.↗
3-D components of a biological neural network visualized in computer generated imagery. I - Macular receptive field organization
Computer-assisted, 3-dimensional reconstructions of macular receptive fields and of their linkages into a neural network have revealed new information about macular functional organization. Both type I and type II hair cells are included in the receptive fields. The fields are rounded, oblong, or elongated, but gradations between categories are common. Cell polarizations are divergent. Morphologically, each calyx of oblong and elongated fields appears to be an information processing site. Intrinsic modulation of information processing is extensive and varies with the kind of field. Each reconstructed field differs in detail from every other, suggesting that an element of randomness is introduced developmentally and contributes to endorgan adaptability.
Ross, Muriel D.↗
Mechanisms for Engineering Design.
Book on functional mechanisms for engineering design, presenting kinematic characteristics of output motion, planar linkage and spatial cycloidal crank and flexural mechanisms
KINEMATICS↗
Structurally-Tailorable, Nonlinear, Snap-Through Spring
Abrupt change in load/deflection response controllable and predictable. Structurally-tailorable, nonlinear, snap-through spring (STNSTS) exhibits controllable and predictable abrupt change in load/deflection response and based upon known phenomenon of snap-through structural response. Composed of pin-connected two-bar linkage which depicts combined tension/compression springs. As load applied to STNSTS, stiffness is function of internal spring and bending stiffness of pin-connected bars. As load increases, bars deform laterally until they collapse and snap through. Has application in passively-tailored rotor-blade flap, pitch, and lag response, to improve aerodynamic performance and stability characteristics of rotors; in aerodynamically- and aeroelastically-tailored wing spars and ribs, to produce tailored deformation state for improved effectiveness in maneuvering, aerodynamic performance, and stability characteristics; and in energy absorbers for automobile bumpers and aircraft land
Starnes, James H., Jr.↗
On the Motions of an Oscillating System Under the Influence of Flip-Flop Controls
So-called flip-flop controls (also called "on-off-course controls") are frequently preferred to continuous controls because of their simple construction. Thus they are used also for the steering control of airplanes. Such a body possesses-even if one thinks, for instance, only of the symmetric longitudinal motion - three degrees of freedom so that a study of its motions under the influence of an intermittent control is at least lengthy. Thus, it is suggested that an investigation of the basic effect of such a control first be made on a system with one degree of freedom. Furthermore, we limit ourselves in the resent report to the investigation of an "ideal" control where the control surface immediately obeys the command given by the "steering control function". Thus the oscillation properties of the control surface and the defects in linkage, sensing element, and mixing device are, at first, neglected. As long as the deviations from the "ideal" control may be neglected in practice, also the motion of the control surface takes place at the heat of the motion of the principal system. The aim of our investigation is to obtain a survey of the influence of the system and control coefficients on the damping behavior which is to be attained.
Fluegge-Lotz, I.↗
Asthma and Air Quality in the Presence of Fires - A Foundation for Public Health Policy in Florida
Outdoor air quality and its associated impacts on respiratory problems in Florida are of public health significance. Air quality in Florida can be poor during the extended wildfire season, threatening persons with compromised respiratory systems each year. Studies have demonstrated that particulate matter, which is generally elevated in the vicinity of wildfires, is associated with increases in hospital admissions and occurrences of acute asthma exacerbations. However, few studies have examined the modifying effect of socio-demographic characteristics of cities or regional areas on the relationship between air quality and health outcomes. In an ongoing university/multi-agency project, asthma hospital/emergency room (patient) data are being used to create a health outcome indicator of human response to environmental air quality. Environmental data are derived from satellite measurements, with special attention being given to the effect of wildfires and prescribed burns on air quality. This presentation will focus on the environmental data sets particulate matter, location of fires, smoke plumes that are being collected and processed for linkage with health data. After this linkage has been performed, space-time models of asthma rates as a function of air quality data and socio-demographic variables will be developed and validated. The Florida Department of Health (FDOH) will work with county health department staff and representatives from the medical community to establish a protocol with triggers for issuing public health advisories/alerts based on the developed and validated health outcome indicators. From this effort, a science-based policy for issuing public health advisories/alerts for asthma relating to air quality will be developed, giving FDOH the ability to (1) predict, with stated levels of uncertainty, case load of hospital admissions based on air quality, (2) reduce asthma exacerbations by forewarning asthmatics to limit outside activities on poor air quality days, (3) apply management practices on the rates of hospital/emergency room visits for asthma, and (4) provide information that would help translate interventions into policy decisions, thereby reducing the economic burden and increasing well being of asthmatics. Further, the results of the study will be incorporated into Florida s Environmental Public Health Tracking (EPHT) program, which is part of the Centers for Disease Control and Prevention's (CDC's) EPHT network.
Crosson, William↗
Three-Dimensional Field Solutions for Multi-Pole Cylindrical Halbach Arrays in an Axial Orientation
This article presents three-dimensional B field solutions for the cylindrical Halbach array in an axial orientation. This arrangement has applications in the design of axial motors and passive axial magnetic bearings and couplers. The analytical model described here assumes ideal magnets with fixed and uniform magnetization. The field component functions are expressed as sums of 2-D definite integrals that are easily computed by a number of mathematical analysis software packages. The analysis is verified with sample calculations and the results are compared to equivalent results from traditional finite-element analysis (FEA). The field solutions are then approximated for use in flux linkage and induced EMF calculations in nearby stator windings by expressing the field variance with angular displacement as pure sinusoidal function whose amplitude depends on radial and axial position. The primary advantage of numerical implementation of the analytical approach presented in the article is that it lends itself more readily to parametric analysis and design tradeoffs than traditional FEA models.
Thompson, William K.↗
Knob linkage permits one-hand control of several operations
Electromechanical device with single knob provides one-hand control of numerous electrical or mechanical functions. The principle of this design may have application to remote-control switching devices.
Codding, G. C.↗
New Apparatus Tests Pressure-Suit Joints
New apparatus measures applied torque and angle-of-flexure in pressurized flexible joints, such as those found in diving suits and flight suits. Torque and flexure are permanently recorded on x-y plotter. Family of curves can be taken as function of suit pressure or other variables. Apparatus could also measure torque-versus-angle in mechanical linkages.
Vykukal, H. C.↗
On-board communication for active-control transport aircraft
An investigation of active control communications sponsored by the NASA Langley Research Center is summarized. Particular attention is given to comparative architectures, for which a common set of requirements is generated as a baseline. Most of the requirements are aircraft functional in nature, such as stability and command augmentation, structural load relief, flight path control, flight control linkage, flight monitoring, management, navigation, engine control, and ground communication; the time element, the hazard environment, and the communications capacity estimation are also important factors. The architectures involve several communication technologies, including dedicated links, broadcast busing, and multiplex busing. The multiplex bus system provides the greatest flexibility and installation efficiency. A future homogeneous network system is also proposed, which would be fault and damage tolerant and would, with advanced technology, avoid the problems of designing a very large and flight critical multiplex bus system.
Brock, L. D.↗
Cockpit resource management - Exploring the attitude-performance linkage
Measured attitudes regarding cockpit management were contrasted for pilots whose line flying performance was independently evaluated by check airmen as above or below average. A highly significant discriminant function was obtained indicating that these attitudes are significant predictors of behavior. The performance of 95.7 percent of the pilots was correctly classified by the analysis. Implications of the results for cockpit resource management training and pilot selection are discussed.
Helmreich, R. L.↗
Contemplating the plasmalemmal control center model
An abundant epidermal mechanosensory calcium-selective ion channel appears able not only to detect mechanical stimuli such as those that initiate gravitropism but also to detect thermal, electrical, and various chemical stimuli. Because it responds to multimodal input with a second messenger output, this channel system seems likely to be an integrator that can engage in feedbacks with many other systems of the cell--and feedback is the hallmark of regulation. In general, the mechanical tension required for channel activation is likely transmitted from the relatively rigid cell wall to the plasma membrane system via linkage or adhesion sites that display antigenicities recognized by antibodies to animal beta-1 integrin, vitronectin, and fibronectin and which have mechanical connections to the cytoskeleton. Thus, functionally, leverage exerted against any given adhesion site will tend to control channels within a surrounding domain. Reactions initiated by passage of calcium ions through the channels could presumably be more effectively regulated if channels within the domains were somewhat clustered and if appropriate receptors, kinases, porters, pumps, and some key cytoskeletal anchoring sites were in turn clustered about them. Accumulating evidence suggests not only that activity of clusters of channels may contribute to control of cytoskeletal architecture and of regulatory protein function within their domain, but also that both a variety of regulatory proteins and components of the cortical cytoskeleton may contribute to control of channel activity. The emerging capabilities of electronic optical microscopy are well suited for resolving the spatial distributions of many of these cytoskeletal and regulatory molecules in living cells, and for following some of their behaviors as channels are stimulated to open and cytosolic calcium builds in their vicinity. Such microscopy, coupled with biochemical and physiological probing, should help to establish the nature of the feedback loops putatively controlled by the linkage sites and their channel domains.
Review↗
Algorithm Development for Predicting Biodiversity Based on Phytoplankton Absorption
Ocean color remote sensing has provided the scientific community with unprecedented global coverage of chlorophyll a, an indicator of phytoplankton biomass. Together, satellite-derived chlorophyll a and knowledge of Phytoplankton Functional Types (PFTs) will improve our limited understanding of marine ecosystem responses to physiochemical climate drivers involved in carbon cycle dynamics and linkages. Using cruise data from the Gulf of Maine and the Middle Atlantic Bight (N 269 pairs of HPLC and phytoplankton absorption samples), two modeling approaches were utilized to predict phytoplankton absorption and pigments. Algorithm I predicts the chlorophyll-specific absorption coefficient (a*(sub ph) (m(exp 2) mg chl a(exp - 1)) using inputs of temperature, light, and chlorophyll a. Modeled r(exp 2) values (400700 nm) ranged from 0.79 to 0.99 when compared to in situ observations with approximately 25 percent lower r(exp 2) values in the UV region. Algorithm II-a utilizes matrix inversion analysis to predict a(sub ph)(m(exp -1), 400700 nm) and r(exp 2) values ranged from 0.89 to 0.99. The prediction of phytoplankton pigments with Algorithm II-b produced r(exp 2) values that ranged from 0.40 to 0.93. When used in combination, Algorithm I, and Algorithm II-a are able to use satellite products of SST, PAR, and chlorophyll a (Algorithm I) to predict pigment concentrations and ratios to describe the phytoplankton community. The results of this study demonstrate that the spatial variation in modeled pigment ratios differ significantly from the 10-year SeaWiFS average chlorophyll a data set. Contiguous observations of chlorophyll a and phytoplankton biodiversity will elucidate ecosystem responses with unprecedented complexity.
phytoplankton↗
Structure-to-glass transition temperature relationships in high temperature stable condensation polyimides
The presence of a hexafluoroisopropylidene (6F) connecting group in aryl dianhydrides used to prepare aromatic condensation polyimides provides high glass transition temperature (T sub g) polyimides with excellent thermo-oxidative stability. The purpose of this study was to determine if a trifluorophenyl-ethylidene (3F) connecting group would have a similar effect on the T sub g of aromatic condensation polyimides. A new dianhydride containing the 3F connecting group was synthesized. This dianhydride and an aromatic diamine also containing the 3F connecting group were used together and in various combinations with known diamines or known dianhydrides, respectively, to prepare new 3F containing condensation polyimides. Known polyimides, including some with the 6F connecting linkage, were also prepared for comparison purposes. The new 3F containing polymers and the comparison polymers were prepared by condensation polymerization via the traditional amic-acid polymerization method in N,N-dimethylacetamide solvent. The solutions were characterized by determining their inherent viscosities and then were thermally converted into polyimide films under nitrogen atmosphere at 300 to 500 C, usually 350 C. The T sub g's of the films and resin discs were then determined by thermomechanical analysis and were correlated as a function of the final processing temperatures of the films and resin discs. The results showed that similarities existed in the T sub g's depending on the nature of the connecting linkage in the monomers used to prepare the condensation polyimides.
Alston, W. B.↗
Statistical analysis of mesoscale rainfall: Dependence of a random cascade generator on large-scale forcing
Under the theory of independent and identically distributed random cascades, the probability distribution of the cascade generator determines the spatial and the ensemble properties of spatial rainfall. Three sets of radar-derived rainfall data in space and time are analyzed to estimate the probability distribution of the generator. A detailed comparison between instantaneous scans of spatial rainfall and simulated cascades using the scaling properties of the marginal moments is carried out. This comparison highlights important similarities and differences between the data and the random cascade theory. Differences are quantified and measured for the three datasets. Evidence is presented to show that the scaling properties of the rainfall can be captured to the first order by a random cascade with a single parameter. The dependence of this parameter on forcing by the large-scale meteorological conditions, as measured by the large-scale spatial average rain rate, is investigated for these three datasets. The data show that this dependence can be captured by a one-to-one function. Since the large-scale average rain rate can be diagnosed from the large-scale dynamics, this relationship demonstrates an important linkage between the large-scale atmospheric dynamics and the statistical cascade theory of mesoscale rainfall. Potential application of this research to parameterization of runoff from the land surface and regional flood frequency analysis is briefly discussed, and open problems for further research are presented.
Over, Thomas, M.↗