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All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Data and scripts associated with “Allometric scaling of hyporheic respiration across basins in the Pacific Northwest USA"

This data package is associated with the publication “Allometric scaling of hyporheic respiration across basins in the Pacific Northwest USA” submitted to JGR-Biogeosciences (Regier et al. 2025).This study used reach-scale modeled estimates of hyporheic aerobic respiration made by the River Corridor Model (Fang et al. 2020) and watershed characteristics across the Willamette and Yakima River basins to explore potential allometric scaling (i.e., power-law relationships between size and function) of cumulative hyporheic respiration across catchment-to-basin scales. Scaling was explored quantitatively via the R2, slope, and y-intercept of relationships between cumulative hyporheic respiration and watershed area, divided into hyporheic exchange flux (HEF) quantiles. We also explored relationships between allometric scaling and other watershed characteristics through linear regression, spatial patterns, and mutual information analyses. Our results also suggest variability of hyporheic respiration allometry for middle exchange flux quantiles, and in relation to land-cover. Our findings provide initial evidence that allometric scaling may be useful for predicting hyporheic biogeochemical dynamics across watersheds from reach to basin scales. This data package is associated with the GitHub repository found at https://github.com/peterregier/rc_wrb_yrb_scaling. The data package is organized into several key directories. The “data” folder contains multiple CSV files, including landscape heterogeneity, scaling analysis, and watershed boundary data. The “figures” folder has all figure files in both PDF and PNG formats. Core analysis scripts and figure generation scripts are in the “scripts” directory, systematically numbered for sequential execution. The root directory includes essential project files; please see the file ending in “flmd.csv” for a list and description of all files contained in this data package and the file ending in “dd.csv” for data dictionaries used to describe tabular column headers.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Data associated with “Different methods of estimating riverbed sediment grain size diverge at the basin scale ” (v2)

This data package is associated with the publication “Different methods of estimating riverbed sediment grain size diverge at the basin scale” published in Frontiers in Earth Science (Regier et al., 2025). The distribution of sediment grain size in streams and rivers is often quantified by the median grain size (d50), a key metric for understanding and predicting hydrologic and biogeochemical function of streams and rivers. Manual methods to measure d50 are time-consuming and ignore larger grains, while model-based methods to estimate d50 often over-generalize basin characteristics, and therefore cannot accurately represent site-scale heterogeneity. Here, we apply a machine learning-enabled photogrammetry methodology (You Only Look Once, or YOLO) for estimating d50 for grains > 2 mm based on images collected from streams and rivers throughout the Yakima River Basin (YRB). To understand how such methods may help bridge the gaps in resolution and accuracy between manual and catchment characteristics model-based d50 estimates, we compared YOLO d50 values to manual and model-based estimates across the YRB. We found distinct differences among methods for d50 averages and variability, and relationships between d50 estimates and basin characteristics. Source images can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1892052. This data package was originally published in May 2023. It was updated August 2025 (v2; new and modified files). File and folder names were not revised to indicate changes. See the change history section in the readme for more details. In addition to the readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) readme; (4) and subfolders containing data, figures, and scripts. The data folder contains datasets used for the analyses in the manuscript in image, text-delimited or geospatially-referenced formats. The figures folder contains the figures from the manuscript in different formats. The scripts folder contains all of the scripts used to complete the analyses in the manuscript. All files are .csv, .rds, .dbf, .prj, .shp, .shx, .jpg, .png, .R, .Rproj, or .pdf. We acknowledge the Yakama Nation as owners and caretakers of the lands where we collected some of these data. We thank the Confederated Tribes and Bands of the Yakama Nation Tribal Council and Yakama Nation Fisheries for working with us to facilitate sample collection and optimization of data usage according to their values and worldview.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Maps of Arctic vegetation leaf nitrogen concentration, albedo and plant functional type (PFT) derived from imaging spectroscopy data, Council watershed, Seward Peninsula, Alaska, 2019

Remote sensing maps of surface albedo, leaf nitrogen content, and plant functional types (PFTs) derived from NASA's Airborne Visible / Infrared Imaging Spectrometer Next Generation (AVIRIS-NG) by the Terrestrial Ecosystem Science & Technology (TEST) group at Brookhaven National Laboratory. The AVIRIS-NG imaging spectroscopy data (380 ~ 2510 nm) was collected as a part of the collaboration between NASA's Arctic-Boreal Vulnerability Experiment (ABoVE; Miller et al., 2019) and DOE's Next Generation Ecosystem Experiment in the Arctic (NGEE-Arctic). This package includes maps for the NGEE-Arctic Council watershed created using AVIRIS-NG imagery collected on July 9th, 2019. The map data and metadata are provided as image (ENVI, *.png) and text (*.txt, *hdr) formats. Additional supporting map quicklooks are provided as *.png files and GIS *.kml files. Detailed description of the methods for each map are provided in this document. These datasets are provided in support of Figure 6 in Nelson et al., (2022), "Remote Sensing of Tundra Ecosystems using High Spectral Resolution Reflectance: Opportunities and Challenges". The full citation can be found within the references section. Note that the AVIRIS-NG leaf nitrogen product included in this dataset is a preliminary product and is provided for demonstration purposes only. It is not recommended that the map be used for scientific applications. For future updates on these products, please contact the authors.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Maps of plant functional type (PFT), PFT fractional cover, and uncertainty derived from AVIRIS-NG data, 2019, Seward Peninsula

Remote sensing maps of plant functional type (PFT), PFT fractional cover (fCover), and fCover uncertainty maps derived from NASA’s Airborne Visible / Infrared Imaging Spectrometer – Next Generation (AVIRIS-NG). The AVIRIS-NG imaging spectroscopy data (380 ~ 2510 nm) was collected as a part of the collaboration between NASA’s Arctic-Boreal Vulnerability Experiment (ABoVE; Miller et al., 2019) and DOE’s Next Generation Ecosystem Experiment in the Arctic (NGEE-Arctic). This package includes maps for flights over Teller, Kougarok, and Council watersheds created using eight AVIRIS-NG imagery collected in July, 2019. The map data and metadata are provided as image (ENVI, *.png) and text (*.txt, *hdr) formats. Additional supporting map quicklooks are provided as GIS *.kml files. Detailed description of the methods for each map are provided in Yang et al., (2023). These datasets are provided in support of Yang et al., (In revision) “Topography and Functional Traits Control the Distribution of Key Shrub Plant Functional Types in Low-Arctic Tundra”.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Data and scripts associated with “Riverine dissolved organic matter transformations increase with watershed area, water residence time, and Damköhler numbers in nested watersheds” (v2)

This data package is associated with the publication “Riverine dissolved organic matter transformations increase with watershed area, water residence time, and Damköhler numbers in nested watersheds” submitted to Biogeochemistry by Ryan et al., 2024 (DOI: https://doi.org/10.1007/s10533-024-01169-5). This study aims to investigate fundamental and transferable drivers of dissolved organic matter (DOM) diversity across five nested watersheds within the contiguous United States. DOM diversity was explored using ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). The samples and the unprocessed FTICR-MS data used in this study are publicly available on the Environmental System Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE) data repository (see DOIs below). The data for the Willamette, Gunnison, Connecticut, and Deschutes basins were collected as part of a collaboration between the Watershed Rules of Life (WROL) project and Worldwide Hydrobiogeochemistry Observation Network for Dynamic River Systems (WHONDRS). The data for the Yakima River basin (YRB) was collected by the PNNL River Corridor SFA. The raw, unprocessed FTICR-MS data with additional (meta)data can be found at doi:10.15485/1895159 for WROL samples and doi:10.15485/1898912 for YRB samples. This data package contains the processed data used in the associated manuscript. This package also contains ancillary geospatial, hydrological, and geochemical information that supports the interpretation of the FTICR-MS data within Ryan et al., 2024. This data package is associated with the GitHub repository found at https://github.com/WHONDRS-Hub/rcsfa-RC4-WROL-YRB_DOM_Diversity. This data package was originally published August 2024. It was updated January 2025 (modified files). See the change history in the readme more details. At the directory level, the data package is comprised of three folders: (1) data, (2) output, and (3) src; and five additional files including the data dictionary (file ending in "_dd.csv”) and file-level metadata (file ending in “_flmd.csv”). The “src” folder contains the scripts used to process the FTICR data, conduct the analyses, and produce the manuscript figures. The inputs for these scripts are in the “data” folder and the returned outputs in the “output” folder. Inputs include temporal and spatial metadata associated with the sampling efforts, processed FTICR data, and total and normalized putative biochemical transformations per sample. Outputs include cleaned and combined data presented as tables, descriptive statistics, and plots. The file-level metadata file lists all files contained in this data package and descriptions for each. The data dictionary describes the units and definitions for each tabular data column or row header.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Topography and Functional Traits Control the Distribution of Key Shrub Plant Functional Types in Low-Arctic Tundra: Supporting Data

High-resolution classification maps derived from occupied aerial systems (UASs). The UAS data were collected in August 2021 using a Skydio 2+ drone equipped with a 4K resolution red-green-blue (RGB) camera (2024 Skydio Inc) and a 3DR SOLO Quadcopter carried a Parrot Sequoia+ Multispectral Sensor (2023 Parrot Drone SAS). This package includes vegetation classification maps at four locations around Next Generation Ecosystem Experiment Arctic (NGEE Arctic) Council watershed study site on the Seward Peninsula, Alaska. The classification maps were generated using a combination of RGB and canopy height information. The map data and metadata are provided as ENVI image (.dat) and text (.txt, *hdr) formats. Additional map quicklooks are provided as GIS *.kml files. These datasets are provided in support of Yang et al., (In review), “Topography and Functional Traits Control the Distribution of Key Shrub Plant Functional Types in Low-Arctic Tundra”.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 15-year research effort (2012-2027) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Observations and Machine-Learned Models of Near-Surface Permafrost along the Koyukuk River, Alaska, USA

This dataset contains GeoTIFs (raster) and GeoPackages (vector) that map observations of near-surface permafrost and not-permafrost from a field campaign conducted near the village of Huslia, AK along the Koyukuk River and its floodplain in July 2018. These data were collected as part of a campaign to understand if and how permafrost impacts riverbank erosion. This problem cannot be assessed without knowing where permafrost exists. Permafrost was observed via frost probing (to a maximum depth of one meter), coring (to a maximum depth of two meters) and bank/bar excavations. An additional boat survey was performed wherein expert (Joel Rowland) judgment assessed the presence or absence of distinctive permafrost features (e.g., overhanging tundra mats, thermoerosional niching, ice wedges, active drainage of ice melt from soils). This dataset also contains the input features and results of two machine learning models (random forest and convolutional neural network) that extrapolate the observations to the full floodplain that may be useful for building, testing, or validating other machine-learned permafrost models. Permafrost data are provided as georasters of the same shape and geovectors (polylines/polygons) and are all projected into EPSG:32605. All data can be visualized with a GIS (QGIS, ArcGIS, etc.).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Tree, Shrub, and Grass Classification Using Only RGB Images

In this work, a semantic segmentation-based deep learning method, DeepLabV3+, is applied to classify three vegetation land covers, which are tree, shrub, and grass using only three band color (RGB) images. DeepLabV3+’s detection performance has been studied on low and high resolution datasets that both contain tree, shrub, and grass and some other land cover types. The two datasets are heavily imbalanced where shrub pixels are much fewer than tree and grass pixels. A simple weighting strategy known as median frequency weighting was incorporated into DeepLabV3+ to mitigate the data imbalance issue, which originally used uniform weights. The tree, shrub, grass classification performances are compared when all land cover types are included in the classification and also when classification is limited to the three vegetation classes with both uniform and median frequency weights. Among the three vegetation types, shrub is found to be the most challenging one to classify correctly whereas correct classification accuracy was highest for tree. It is observed that even though the median frequency weighting did not improve the overall accuracy, it resulted in better classification accuracy for the underrepresented classes such as shrub in our case and it also significantly increased the average class accuracy. The classification performance and computation time comparison of DeepLabV3+ with two other pixel-based classification methods on sampled pixels of the three vegetation classes showed that DeepLabV3+ achieves significantly higher accuracy than these methods with a trade-off for longer model training time.

58 GEOSCIENCES↗
DOE OSTI2023

Evaluation of Multi-Fidelity Soil Moisture Products Across the Continental United States

We have aggregated the most recent soil moisture datasets from a diverse range of sources, encompassing the Continental United States (CONUS). These sources encompass gridded data from remote sensing products, reanalysis products, machine learning-based projects, and land surface modeling products. Additionally, we have obtained and processed in-situ soil moisture observations from the International Soil Moisture Network. The collected datasets exhibit variations in both temporal and spatial resolutions. Among the 20 datasets, six are available at a spatial resolution of 0.25 degrees, while three are at a coarser spatial resolution of 25 km. To minimize spatial interpolation, we conducted data uncertainty evaluations at the 0.25-degree spatial resolution. For our data evaluations, we maintained a monthly temporal resolution, which effectively captures soil moisture seasonality and interannual variability. Our data processing strategy preserves the raw data and interpolated data at their original temporal resolutions. Datasets with higher temporal resolutions, including daily, three-hourly, and hourly datasets, are set aside for subsequent analyses. These analyses will delve into topics such as soil moisture changes and recovery during extreme weather events. Furthermore, we have processed auxiliary data to enhance our evaluation, leveraging tools such as Google Earth Engine. This includes incorporating topography data, land use land cover data, Köppen-Geiger climate classification, and more to provide a comprehensive assessment from multiple sources.

Li, Lingcheng↗
DOE OSTI2022

A phenology- and trend-based approach for accurate mapping of sea-level driven coastal forest retreat

The rapid replacement of upland forest by encroaching marshland is a striking manifestation of global sea-level rise (SLR). Timely and high-resolution information on the location and extent of transition forest (the ecotone between upland forest and marsh where tree mortality due to seawater intrusion begins) is fundamental to understanding the processes and patterns of SLR-driven landscape reorganization. Despite its significance, accurate characterization of salt-impacted transition forest remains challenging due to the complexity of coastal environments, scarcity of ground-truth data, and the lack of effective mapping algorithms. Here we use the full archive of Landsat images between 1984 and 2021 to investigate the spectral, temporal, and phenological characteristics of transition forest, and develop a robust framework for monitoring coastal vegetation shifts in the mid-Atlantic U.S., a global SLR hotspot. Here, we found that transition forest exhibits strong negative NDVI trends and a deviation of land surface phenology from marsh and upland forest that distinguishes itself from surrounding vegetation. By integrating temporal trends and land surface phenology, our results demonstrate superior discrimination between marsh and coastal forests to existing map products (e.g. NOAA Coastal Change Analysis Program, National Land Cover Database) that allows a reliable identification of the coastal treeline. We applied the approach to map regional land cover in 1985, 2000 and 2020 (overall classification accuracy >92%) and found that the area of coastal forest decreased by 22.0% from 1985 to 2020, the majority of which transitioned to marshland (92.3%, 5.3 × 10 3 ha). Based upon fine-scale patterns of coastal transgression, we created a practical workflow for spatially explicit quantification of forest retreat rates. Concurrent with rising sea level, coastal forests migrated upslope from 0.63 (± 0.27) m above sea level in 1985 to 0.78 (± 0.32) m above sea level in 2020, and horizontal forest retreat rates accelerated from 3.1 (range of 0–36) m yr -1 during 1985–2000 to 4.7 (0–55) m yr -1 during 2001–2020. As SLR continues to accelerate, our study may serve as a scalable solution for consistent tracking of coastal landscape evolution that is urgently needed for sustainable forest and wetland management.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Characterization of Coal Refuse Sites in West Virginia: Stream Loss, Volume Estimation, and Land Cover Analysis for Restoration Feasibility

Coal refuse disposal across Appalachia has resulted in widespread environmental degradation, including stream burial, landscape destabilization, and long-term hydrologic impacts. This study provides a GIS-based spatial characterization of 623 coal refuse sites in West Virginia, evaluating their potential for ecological and economic restoration. Stream loss was quantified through digitization of historic topographic maps, revealing over 194,500 meters of historically present streams lost, with 105,000 meters directly buried beneath refuse piles. Volume estimation using empirical Bayesian kriging and modern LiDAR surfaces indicated approximately 1.96 billion cubic meters of deposited refuse. Land cover analysis based on NAIP-derived classification showed that 48% of the total site area was forested, while 15% remained barren. These results highlight not only the environmental footprint of legacy refuse deposits but also their potential for restoration through stream daylighting and beneficial reuse. Emerging opportunities, including rare earth element recovery and mitigation banking, may offer economic incentives to facilitate reclamation. This work establishes a spatial framework to prioritize refuse sites for restoration, balancing ecological uplift with feasible material management strategies.

58 GEOSCIENCES↗
DOE OSTI2020

Mapping Vegetation at Species Level with High-Resolution Multispectral and Lidar Data Over a Large Spatial Area: A Case Study with Kudzu

Mapping vegetation species is critical to facilitate related quantitative assessment, and mapping invasive plants is important to enhance monitoring and management activities. Integrating high-resolution multispectral remote-sensing (RS) images and lidar (light detection and ranging) point clouds can provide robust features for vegetation mapping. However, using multiple sources of high-resolution RS data for vegetation mapping on a large spatial scale can be both computationally and sampling intensive. Here, we designed a two-step classification workflow to potentially decrease computational cost and sampling effort and to increase classification accuracy by integrating multispectral and lidar data in order to derive spectral, textural, and structural features for mapping target vegetation species. We used this workflow to classify kudzu, an aggressive invasive vine, in the entire Knox County (1362 km2) of Tennessee (U.S.). Object-based image analysis was conducted in the workflow. The first-step classification used 320 kudzu samples and extensive, coarsely labeled samples (based on national land cover) to generate an overprediction map of kudzu using random forest (RF). For the second step, 350 samples were randomly extracted from the overpredicted kudzu and labeled manually for the final prediction using RF and support vector machine (SVM). Computationally intensive features were only used for the second-step classification. SVM had constantly better accuracy than RF, and the producer’s accuracy, user’s accuracy, and Kappa for the SVM model on kudzu were 0.94, 0.96, and 0.90, respectively. SVM predicted 1010 kudzu patches covering 1.29 km2 in Knox County. We found the sample size of kudzu used for algorithm training impacted the accuracy and number of kudzu predicted. The proposed workflow could also improve sampling efficiency and specificity. Our workflow had much higher accuracy than the traditional method conducted in this research, and could be easily implemented to map kudzu in other regions as well as map other vegetation species.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

United States Multi-Sector Dynamics land use and land cover base maps to support Human-Earth System Modeling

Datasets are land use and land cover (LULC) rasterized base maps at 30-m resolution for the conterminous United States (CONUS) for the years 2008, 2011, 2016, and 2019. Separate base maps are provided where LULC classifications are thematically congruent with Community Land Model (CLM), Land Use Harmonization (LUH2), and Global Change Analysis Model (GCAM), and a detailed decomposition of all combined land classes into a Multisector Dynamics (MSD) LULC product. Base maps were developed using empirically derived satellite (National Land Cover Dataset, MODIS) and combined observation datasets (Crop Data Layer, Protected Areas Database) and represent the most up-to-date accurate information on LULC in the CONUS. The four datasets encompass four different landcover classification systems: MSD Layers - The raw landcover classes obtained from reclassifying NLCD and USDA Crop data layers into a respective landcover class GCAM Layers - The MSD classes mosaiced, reclassified, and combined into the respective GCAM landcover classes CLM Layers - Similar process to GCAM layers, but mosaiced, reclassified, and combined MSD layers to their respective PFT classes LUH2 Layers - Similar process to both GCAM and CLM Layers, but mosaiced, reclassified and combined the MSD layers to align with the respective states

Food↗
DOE OSTI2021

Detecting Arsenic Contamination Using Satellite Imagery and Machine Learning

Arsenic, a potent carcinogen and neurotoxin, affects over 200 million people globally. Current detection methods are laborious, expensive, and unscalable, being difficult to implement in developing regions and during crises such as COVID-19. This study attempts to determine if a relationship exists between soil’s hyperspectral data and arsenic concentration using NASA’s Hyperion satellite. It is the first arsenic study to use satellite-based hyperspectral data and apply a classification approach. Four regression machine learning models are tested to determine this correlation in soil with bare land cover. Raw data are converted to reflectance, problematic atmospheric influences are removed, characteristic wavelengths are selected, and four noise reduction algorithms are tested. The combination of data augmentation, Genetic Algorithm, Second Derivative Transformation, and Random Forest regression (R 2 =0.840 and normalized root mean squared error (re-scaled to [0,1]) = 0.122) shows strong correlation, performing better than past models despite using noisier satellite data (versus lab-processed samples). Three binary classification machine learning models are then applied to identify high-risk shrub-covered regions in ten U.S. states, achieving strong accuracy (=0.693) and F1-score (=0.728). Overall, these results suggest that such a methodology is practical and can provide a sustainable alternative to arsenic contamination detection.

63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗
DOE OSTI2024

A network approach for multiscale catchment classification using traits

Abstract. The classification of river catchments into groups with similar biophysical characteristics is useful to understand and predict their hydrological behavior. The increasing availability of remote sensing and other large-scale geospatial datasets has enabled the use of advanced data-driven approaches to classify catchments using traits such as topography, geology, climate, land cover, land use, and human influence. Unsupervised clustering algorithms based on the Euclidean distance are commonly used for trait-based classification but are not suitable for highly dimensional data. In this study we present a new network-based method for multi-scale catchment classification, which can be applied to large datasets and used to determine the traits associated with different catchment groups. In this framework, two networks are analyzed in parallel: the first being where the nodes are traits and the second being where the nodes are catchments. In both cases, edges represent pairwise similarity, and a network cluster detection algorithm is used for the classification. The trait network is used to investigate redundancy in the trait data and to condense this information into a small number of interpretable categories. The catchments network is used to classify the catchments into clusters and to identify representative catchments for the different groups using the degree centrality metric. We apply this method to classify 9067 river catchments across the contiguous United States at both regional and continental scales using 274 non-categorical traits. At the continental scale, we identify 25 interpretable trait categories and 34 catchment clusters of sizes greater than 50. We find that catchments with similar trait categories are typically located in the same region, with different spatial patterns emerging among clusters dominated by natural and anthropogenic traits. We also find that the catchment clusters exhibit distinct hydrological behavior based on an analysis of streamflow indices. This network approach provides several advantages over traditional means of classification, including better separation of clusters, the use of alternate similarity metrics that are more suitable for highly dimensional data, and reducing redundancy in the trait information. The paired catchment–trait networks enable analysis of hydrological behavior using the dominant trait categories for each catchment cluster. The approach can be used at multiple spatial scales since the network topologies adjust automatically to reflect the trait patterns at the scale of investigation. Finally, the representative catchments identified as hub nodes in the network can be used to guide transferable observational and modeling strategies. The method is broadly applicable beyond hydrology for classification of other complex systems that utilize different types of trait datasets.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Farm Practice Typologies as a Strategy for Management-Relevant Land Use and Land Cover Mapping in the Great Lakes Region (Version 1) [Dataset]

Dataset overview and development This dataset provides spatially explicit agricultural land-use and land-management typologies developed for the Great Lakes Region (GLR) at the farm-parcel level. The typologies were designed to characterize not only the land-use and land-cover (LULC) associated with individual agricultural farm parcels, but also the land-management practices (LMPs), including irrigation, tile drainage, and conservation easements, occurring within those parcels and how these characteristics change through time. The dataset contains four related typology products: Annual integrated typology – describes the combined LULC and land-management characteristics for each farm parcel for individual years. LULC transition typology – describes the temporal pattern of LULC change for each farm parcel across the study period (2008-2023). LMP trend typology – describes the temporal pattern in the occurrence of LMPs for each farm parcel across the study period. Multi-year integrated typology – combines the LULC transition typology and LMP trend typology to provide an integrated characterization of long-term land-use and management patterns. Purpose of the dataset The purpose of these products is to provide a management-relevant integrated and consistent framework for evaluating the spatial and temporal organization of agricultural landscapes across the GLR. The resulting typologies can: support landscape-scale environmental and land-use analysis; provide spatial information relevant to land-management strategies, conservation planning, policy development, and program evaluation; characterize spatial patterns of agricultural land use and management; examine changes in agricultural landscapes through time; and identify persistent, transitional, and changing agricultural systems. Please refer to the README file provided in Files for more details.

Agriculture↗
DOE OSTI2022

Classification of Wetland Vegetation Based on NDVI Time Series from the HLS Dataset

Natural wetlands are intrinsically heterogeneous and typically composed of a mosaic of ecosystem patches with different vegetation types. Hydrological and biogeochemical processes in wetlands vary strongly among these ecosystem patches. To date, most remote sensing classification approaches for wetland vegetation either rely on coarse images that cannot capture the spatial variability of wetland vegetation or rely on very-high-resolution multi-spectral images that are detailed but very sporadic in time (less than once per year). This study aimed to use NDVI time series, generated from NASA’s HLS dataset, to classify vegetation patches. We demonstrate our approach at a temperate, coastal lake, estuarine marsh. To classify vegetation patches, a standard time series library of the four land-cover patch types was built from referencing specific locations that were identified as “pure” pixels. These were identified using a single-time high-resolution image. We calculated the distance between the HLS-NDVI time series at each pixel and the “pure”-pixel standards for each land-cover type. The resulting true-positive classified rate was >73% for all patch types other than water lily. The classification accuracy was higher in pixels of a more uniform composition. A set of vegetation maps was created for the years 2016 to 2020 at our research site to identify the vegetation changes at the site as it is affected by rapid water elevation increases in Lake Erie. Our results reveal how changes in water elevation have changed the patch distribution in significant ways, leading to the local extinction of cattail by 2019 and a continuous increase in the area cover of water lily patches.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Large-Scale Classification of Urban Structural Units From Remote Sensing Imagery

Remote sensing in combination with deep learning has become instrumental for efficiently and accurately classifying land-use and land-cover across large geographic areas. These technologies have also been successful in characterizing urban environments in terms of their structural units, structure types, or morphological regions. In these approaches, an urban area is partitioned into regions that exhibit homogeneous physical characteristics. However, existing approaches are typically limited to a single city, use inconsistent typologies, and lack scalability and generalization capacity. In this article, we propose an urban structural units categorization scheme and demonstrate its utility by applying it to 13 cities. Inspired by the lack of scalability and generalization capacity in urban structural units mapping, we extend the reach of deep learning and conduct a set of classification experiments in all 13 cities. These experiments offer insights into the strengths and limitations of deep neural networks for classifying urban structural units over diverse geographic regions and on heterogeneous collections of satellite imagery. The efficacy of the proposed deep learning approach is compared to a baseline method of multiscale image features and support vector machines. Our validation on five cities shows that better performance is achieved with deep neural networks. Additionally, we evaluate the impact of input size, model depth, and spatial pyramid pooling to assess the generalization capacity of deep neural networks.

47 OTHER INSTRUMENTATION↗