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At least 37 records · Page 2

Hyperspectral Biofilm Classification Analysis for Carrying Capacity of Migratory Birds in the South Bay Salt Ponds

Tidal marshes are highly productive ecosystems that support migratory birds as roosting and over-wintering habitats on the Pacific Flyway. Microphytobenthos, or more commonly 'biofilms' contribute significantly to the primary productivity of wetland ecosystems, and provide a substantial food source for macroinvertebrates and avian communities. In this study, biofilms were characterized based on taxonomic classification, density differences, and spectral signatures. These techniques were then applied to remotely sensed images to map biofilm densities and distributions in the South Bay Salt Ponds and predict the carrying capacity of these newly restored ponds for migratory birds. The GER-1500 spectroradiometer was used to obtain in situ spectral signatures for each density-class of biofilm. The spectral variation and taxonomic classification between high, medium, and low density biofilm cover types was mapped using in-situ spectral measurements and classification of EO-1 Hyperion and Landsat TM 5 images. Biofilm samples were also collected in the field to perform laboratory analyses including chlorophyll-a, taxonomic classification, and energy content. Comparison of the spectral signatures between the three density groups shows distinct variations useful for classification. Also, analysis of chlorophyll-a concentrations show statistically significant differences between each density group, using the Tukey-Kramer test at an alpha level of 0.05. The potential carrying capacity in South Bay Salt Ponds is estimated to be 250,000 birds.

Hsu, Wei-Chen↗

Design and Analysis of a Hyperspectral Microwave Receiver Subsystem

Hyperspectral microwave (HM) sounding has been proposed to achieve unprecedented performance. HM operation is achieved using multiple banks of RF spectrometers with large aggregate bandwidth. A principal challenge is Size/Weight/Power scaling. Objectives of this work: 1) Demonstrate ultra-compact (100 cm3) 52-channel IF processor (enabler); 2) Demonstrate a hyperspectral microwave receiver subsystem; and 3) Deliver a flight-ready system to validate HM sounding.

Blackwell, W.↗

Improved Hierarchical Optimization-Based Classification of Hyperspectral Images Using Shape Analysis

A new spectral-spatial method for classification of hyperspectral images is proposed. The HSegClas method is based on the integration of probabilistic classification and shape analysis within the hierarchical step-wise optimization algorithm. First, probabilistic support vector machines classification is applied. Then, at each iteration two neighboring regions with the smallest Dissimilarity Criterion (DC) are merged, and classification probabilities are recomputed. The important contribution of this work consists in estimating a DC between regions as a function of statistical, classification and geometrical (area and rectangularity) features. Experimental results are presented on a 102-band ROSIS image of the Center of Pavia, Italy. The developed approach yields more accurate classification results when compared to previously proposed methods.

Classification↗

Hyperspectral Imaging and Related Field Methods: Building the Science

The proposal requested funds for the computing power to bring hyperspectral image processing into undergraduate and graduate remote sensing courses. This upgrade made it possible to handle more students in these oversubscribed courses and to enhance CSES' summer short course entitled "Hyperspectral Imaging and Data Analysis" provided for government, industry, university and military. Funds were also requested to build field measurement capabilities through the purchase of spectroradiometers, canopy radiation sensors and a differential GPS system. These instruments provided systematic and complete sets of field data for the analysis of hyperspectral data with the appropriate radiometric and wavelength calibration as well as atmospheric data needed for application of radiative transfer models. The proposed field equipment made it possible to team-teach a new field methods course, unique in the country, that took advantage of the expertise of the investigators rostered in three different departments, Geology, Geography and Biology.

Goetz, Alexander F. H.↗

Marker-Based Hierarchical Segmentation and Classification Approach for Hyperspectral Imagery

The Hierarchical SEGmentation (HSEG) algorithm, which is a combination of hierarchical step-wise optimization and spectral clustering, has given good performances for hyperspectral image analysis. This technique produces at its output a hierarchical set of image segmentations. The automated selection of a single segmentation level is often necessary. We propose and investigate the use of automatically selected markers for this purpose. In this paper, a novel Marker-based HSEG (M-HSEG) method for spectral-spatial classification of hyperspectral images is proposed. First, pixelwise classification is performed and the most reliably classified pixels are selected as markers, with the corresponding class labels. Then, a novel constrained marker-based HSEG algorithm is applied, resulting in a spectral-spatial classification map. The experimental results show that the proposed approach yields accurate segmentation and classification maps, and thus is attractive for hyperspectral image analysis.

Tarabalka, Yuliya↗

Hyperspectral Imaging Sensors and the Marine Coastal Zone

Hyperspectral imaging sensors greatly expand the potential of remote sensing to assess, map, and monitor marine coastal zones. Each pixel in a hyperspectral image contains an entire spectrum of information. As a result, hyperspectral image data can be processed in two very different ways: by image classification techniques, to produce mapped outputs of features in the image on a regional scale; and by use of spectral analysis of the spectral data embedded within each pixel of the image. The latter is particularly useful in marine coastal zones because of the spectral complexity of suspended as well as benthic features found in these environments. Spectral-based analysis of hyperspectral (AVIRIS) imagery was carried out to investigate a marine coastal zone of South Florida, USA. Florida Bay is a phytoplankton-rich estuary characterized by taxonomically distinct phytoplankton assemblages and extensive seagrass beds. End-member spectra were extracted from AVIRIS image data corresponding to ground-truth sample stations and well-known field sites. Spectral libraries were constructed from the AVIRIS end-member spectra and used to classify images using the Spectral Angle Mapper (SAM) algorithm, a spectral-based approach that compares the spectrum, in each pixel of an image with each spectrum in a spectral library. Using this approach different phytoplankton assemblages containing diatoms, cyanobacteria, and green microalgae, as well as benthic community (seagrasses), were mapped.

Richardson, Laurie L.↗

A Marker-Based Approach for the Automated Selection of a Single Segmentation from a Hierarchical Set of Image Segmentations

The Hierarchical SEGmentation (HSEG) algorithm, which combines region object finding with region object clustering, has given good performances for multi- and hyperspectral image analysis. This technique produces at its output a hierarchical set of image segmentations. The automated selection of a single segmentation level is often necessary. We propose and investigate the use of automatically selected markers for this purpose. In this paper, a novel Marker-based HSEG (M-HSEG) method for spectral-spatial classification of hyperspectral images is proposed. Two classification-based approaches for automatic marker selection are adapted and compared for this purpose. Then, a novel constrained marker-based HSEG algorithm is applied, resulting in a spectral-spatial classification map. Three different implementations of the M-HSEG method are proposed and their performances in terms of classification accuracies are compared. The experimental results, presented for three hyperspectral airborne images, demonstrate that the proposed approach yields accurate segmentation and classification maps, and thus is attractive for remote sensing image analysis.

Tarabalka, Y.↗

Remote Sensing, Uncertainty Quantification, and a Theory of Data Systems; Workshop Report

The purpose of the workshop was to invite statisticians, applied mathematicians, computer scientists, data system architects, experts in remote sensing technology, and Climate and Earth System scientists to review, discuss, and plan research on issues related to large-scale, efficient analysis of distributed data using spatial statistical methods. Our motivation in organizing this event was to catalyze interchange among experts on the fast-emerging problem of analysis of distributed data. As part of SAMSI's 2017-2018 Program on Mathematical and Statistical Methods for Climate and the Earth System, a Working Group on Remote Sensing was established to address statistical and mathematical research problems in the analysis of remote sensing data. The Working Group has five subgroups: 1) Spatial Retrieval Methodology (the so-called \Spatial-X" subgroup); 2) Spatial Analysis for Hyperspectral Data (the so-called \Spatial-Y" subgroup); 3) Emulators for Complex Forward Models; 4) Optimization for Remote Sensing Retrievals; and 5) Theory of Data Systems (ToDS). The ToDS subgroup spent the first half of this academic year formulating a framework in which to consider the joint problem of a) optimizing statistical methods for environments where data are distributed and too large to move to a central location, and b) the design of data system infrastructures within which to implement those statistical methods. To x ideas, the Workshop focused on spatial statistical methods. To date there are many new spatial statistical methods designed with massive data sets in mind, in the literature. However, very few have been implemented for remote sensing data, and none have been implemented in operational settings like those used by NASA and NOAA. A major impediment to their use in these cases is that the data are not only massive, but are stored in different physical locations. These data must be brought together in some way in order to estimate spatial covariance functions, but moving data to a central location for analysis is tedious at best and impossible at worst. Some remote data reduction is almost certainly necessary, but how much? What are the consequences for inference? The fundamental issue underlying these questions is how to navigate the trade-space between costs and uncertainty in the estimates or inferences that are ultimately produced.

Braverman, Amy↗

A Blind Convolutional Deep Autoencoder for Spectral Unmixing of Hyperspectral Images Over Waterbodies

Harmful algal blooms have dangerous repercussions for biodiversity, the ecosystem, and public health. Automatic identification based on remote sensing hyperspectral image analysis provides a valuable mechanism for extracting the spectral signatures of harmful algal blooms and their respective percentage in a region of interest. This paper proposes a new model called a non-symmetrical autoencoder for spectral unmixing to perform endmember extraction and fractional abundance estimation. The model is assessed in benchmark datasets, such as Jasper Ridge and Samson. Additionally, a case study of the HSI2 image acquired by NASA over Lake Erie in 2017 is conducted for extracting optical water types. The results using the proposed model for the benchmark datasets improve unmixing performance, as indicated by the spectral angle distance compared to five baseline algorithms. Improved results were obtained for various metrics. In the Samson dataset, the proposed model outperformed other methods for water (0.060) and soil (0.025) endmember extraction. Moreover, the proposed method exhibited superior performance in terms of mean spectral angle distance compared to the other five baseline algorithms. The non-symmetrical autoencoder for the spectral unmixing approach achieved better results for abundance map estimation, with a root mean square error of 0.091 for water and 0.187 for soil, compared to the ground truth. For the Jasper Ridge dataset, the non-symmetrical autoencoder for the spectral unmixing model excelled in the tree (0.039) and road (0.068) endmember extraction and also demonstrated improved results for water abundance maps (0.1121). The proposed model can identify the presence of chlorophyll-a in waterbodies. Chlorophyll-a is an essential indicator of the presence of the different concentrations of macrophytes and cyanobacteria. The non-symmetrical autoencoder for spectral unmixing achieves a value of 0.307 for the spectral angle distance metric compared to a reference ground truth spectral signature of chlorophyll-a. The source code for the proposed model, as implemented in this manuscript, can be found at https://github.com/EstefaniaAlfaro/autoencoder_owt_spectral.git.

hyperspectral imaging↗

On the Distribution and Implications of Mantled and Exhumed Terrains on Mars

The intent of this paper is to show the relationships for Mars among albedo, thermal inertia, roughness inferred from MOLA pulse width spread data, and geology inferred from photogeological analyses. Mapping of surface units using these parameters and approaches, in combination with analysis of hyperspectral image data from ISM, TES, OMEGA, and CRISM observations, will maximize our understanding of the distribution and nature of surface units on the red planet. Results will directly impact the selection of landing sites that exhibit geological records needed to understand planetary habitability.

Arvidson, R. E.↗

Advanced Multimission Operations System (ATMO)

The HiiHat toolbox developed for CAT/ENVI provides principal investigators direct, immediate, flexible, and seamless interaction with their instruments and data from any location. Offering segmentation and neutral region division, it facilitates the discovery of key endmembers and regions of interest larger than a single pixel. Crucial to the analysis of hyperspectral data from Mars or Earth is the removal of unwanted atmospheric signatures. For Mars and the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM), residual atmospheric CO2 absorption is both directly problematic and indicative of processing errors with implications to the scientific utility of any particular image region. Estimating this residual error becomes key both in selecting regions of low distortion, and also to select mitigating methods, such as neutral region division. This innovation, the ATMO estimator, provides a simple, 0-1 normalized scalar that estimates this distortion (see figure). The metric is defined as the coefficient of determination of a quadratic fit in the region of distorting atmospheric absorption (approx 2 micron). This mimics the behavior of existing CRISM team mineralogical indices to estimate the presence of known, interesting mineral signatures. This facilitates the ATMO metric's assimilation into existing planetary geology workflows.

Mandrake, Lucas↗

An Initial Assessment of the Impact of System Spectral Response Parameters on Driving Ocean Color Applications for the GeoXO Ocean Color Instrument (OCX)

NOAA’s Geostationary Extended Observations (GeoXO) program is planning to include a hyperspectral ocean color instrument (OCX) in geostationary orbit slated for operations by the early 2030s. Shared international focus has led to a diverse legacy of space-based remote sensing ocean color missions that have and will continue to provide ocean color products into the future at a variety of spatial, temporal, and spectral resolutions. This work reports on an investigation of the impacts of system spectral response parameters on spectral shape and algal bloom detection for the planned OCX instrument. A dataset of high resolution (1 nm spectral sampling) in-situ spectra of red tide collected with an above water spectrometer, and associated K. brevis cell concentrations, were used to simulate OCX observations of varying system spectral response parameters. The OCX Performance Operational Requirements Document (PORD) level spectral resolution and sampling are varied concurrently and the location of band centers is varied independently. The impacts to the spectral shape using hyperspectral signature analysis, as well as the impacts to two heritage multispectral algal bloom detection algorithms – red band difference (RBD) and Karenia brevis bloom index (KBBI) – are assessed considering both changes in resolution/sampling and band center location. This work provides a quantitative assessment of the impacts of system spectral response requirements on both the spectral shape of observations as well as the algal bloom detection to provide insight on how various instrument performance parameters influence science and operational utility of OCX. Future work will seek to expand this analysis to include a larger dataset that considers additional water cases.

Monica Cook↗

An assessment of the impact of system spectral response parameters on spectral shape and algal bloom detection for the GeoXO ocean color instrument (OCX)

NOAA’s Geostationary Extended Observations (GeoXO) program is planning to include a hyperspectral ocean color instrument (OCX) in geostationary orbit slated for operations by the early 2030s. Shared international focus has led to a diverse legacy of space-based remote sensing ocean color missions that have and will continue to provide ocean color products into the future at a variety of spatial, temporal, and spectral resolutions. This work reports on an investigation of the impacts of system spectral response parameters on spectral shape and algal bloom detection for the planned OCX instrument. A large dataset in-situ spectra, from a variety of locations and water cases collected with an above water spectrometer, was used to simulate OCX observations of varying system spectral response parameters. The OCX Performance Operational Requirements Document (PORD) level spectral resolution and sampling are varied concurrently and the location of band centers is varied independently. The impacts to the spectral shape using hyperspectral signature analysis, as well as the impacts to two heritage multispectral algal bloom detection algorithms – red band difference (RBD) and Karenia brevis bloom index (KBBI) – are assessed considering both changes in resolution/sampling and band center location. This work provides a quantitative assessment of the impacts of system spectral response requirements on both the spectral shape of observations as well as the algal bloom detection to provide insight on how various instrument performance parameters influence science and operational utility of OCX.

Monica Cook↗

An Initial Assessment of the Impact of System Spectral Response Parameters on Driving Ocean Color Applications for the GeoXO Ocean Color Instrument (OCX)

NOAA’s Geostationary Extended Observations (GeoXO) program is planning to include a hyperspectral ocean color instrument (OCX) in geostationary orbit slated for operations by the early 2030s. Shared international focus has led to a diverse legacy of space-based remote sensing ocean color missions that have and will continue to provide ocean color products into the future at a variety of spatial, temporal, and spectral resolutions. This work reports on an investigation of the impacts of system spectral response parameters on spectral shape and algal bloom detection for the planned OCX instrument. A dataset of high resolution (1 nm spectral sampling) in-situ spectra of red tide collected with an above water spectrometer, and associated K. brevis cell concentrations, were used to simulate OCX observations of varying system spectral response parameters. The OCX Performance Operational Requirements Document (PORD) level spectral resolution and sampling are varied concurrently and the location of band centers is varied independently. The impacts to the spectral shape using hyperspectral signature analysis, as well as the impacts to two heritage multispectral algal bloom detection algorithms – red band difference (RBD) and Karenia brevis bloom index (KBBI) – are assessed considering both changes in resolution/sampling and band center location. This work provides a quantitative assessment of the impacts of system spectral response requirements on both the spectral shape of observations as well as the algal bloom detection to provide insight on how various instrument performance parameters influence science and operational utility of OCX. Future work will seek to expand this analysis to include a larger dataset that considers additional water cases.

M. Cook↗

AOTF Polarimetric Hyperspectral Imaging for Mine Detection.

This paper reports an analysis of polarimetric hyperspectral imagery of an outdoor scene containing a number of inactive mines. The imagery was taken with a visible/near-infrared acousto-optic tunable filter prototype system. The result has illustrated that the characteristics of mine smooth surfaces can create high signals in polarization difference images and consequently provide a quick and reliable approach for detection.

['Mine↗

Characteristics of the Mars Pathfinder Landing Site from CRISM Hyperspectral Imaging

Preliminary analysis of CRISM imaging of the Mars Pathfinder landing site is consistent with previously reported results from landed imaging. At tens of meters scale, the surface is largely dust-covered. Lee portions of topographic knobs are reddest and show most evidence for ferric mineralogy. The nearby 1.5-km diameter "Big Crater" exposes olivine, which is atypical of the northern plains. Big Crater may have penetrated northern plains material to expose buried basaltic highlands.

Murchie, S.↗