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All sourcesNASA NTRSDOE OSTI
NASA NTRS2012

Height and Biomass of Mangroves in Africa from ICEsat/GLAS and SRTM

The accurate quantification of forest 3-D structure is of great importance for studies of the global carbon cycle and biodiversity. These studies are especially relevant in Africa, where deforestation rates are high and the lack of background data is great. Mangrove forests are ecologically significant and it is important to measure mangrove canopy heights and biomass. The objectives of this study are to estimate: 1. The total area, 2. Canopy height distributions and 3. Aboveground biomass of mangrove forests in Africa. To derive mangrove 3-D structure and biomass maps, we used a combination of mangrove maps derived from Landsat ETM+, LiDAR canopy height estimates from ICEsat/GLAS (Ice, Cloud, and land Elevation Satellite/Geoscience Laser Altimeter System) and elevation data from SRTM (Shuttle Radar Topography Mission) for the African continent. More specifically, we extracted mangrove forest areas on the SRTM DEM using Landsat based landcover maps. The LiDAR (Light Detection and Ranging) measurements from the large footprint GLAS sensor were used to derive local estimates of canopy height and calibrate the Interferometric Synthetic Aperture Radar (InSAR) data from SRTM. We then applied allometric equations relating canopy height to biomass in order to estimate above ground biomass (AGB) from the canopy height product. The total mangrove area of Africa was estimated to be 25 960 square kilometers with 83% accuracy. The largest mangrove areas and greatest total biomass was 29 found in Nigeria covering 8 573 km2 with 132 x10(exp 6) Mg AGB. Canopy height across Africa was estimated with an overall root mean square error of 3.55 m. This error also includes the impact of using sensors with different resolutions and geolocation error which make comparison between measurements sensitive to canopy heterogeneities. This study provides the first systematic estimates of mangrove area, height and biomass in Africa. Our results showed that the combination of ICEsat/GLAS and SRTM data is well suited for vegetation 3-D mapping on a continental scale.

Fatoyinbo, Temilola E.↗
DOE OSTI2026

Ecological and genomic variation in ectomycorrhizal fungal exploration types

Ectomycorrhizal fungi (EMF) produce mycelia with variable extension and complexity, which can be classified according to soil ‘exploration types’ (ETs). ETs have received attention as one of the few mycorrhizal trait frameworks, but without an empirical classification of ET functional diversity and environmental preferences, understanding and interpreting EMF biogeographic patterns has been difficult. We conducted a synthesis combining: comparative EMF genomics to describe functional divergence in decomposition and nutrient cycling genes across ETs; and EMF trait distribution modeling across continental Europe, pairing soil and root EMF surveys to establish biogeographic ET niche profiles. We demonstrate a signature of ETs encoded in EMF genomes, which is independent from phylogeny and linked to biomass production strategies. EMF ET relative abundances were separated by soil, root, and dominant tree leaf type habitats and exhibited unique correlations with forest biotic (e.g. plant productivity and plant pathogen densities) and abiotic (e.g. nitrogen deposition and soil pH) conditions. These findings support a theory that EMF niche partitioning can be partially explained by extraradical mycelial traits, with underlying variation in ET biogeography likely arising from distinct decomposition and nutrient cycling potentials. We also identify important limitations to this trait framework and provide a guided outlook for future research.

biogeography↗
DOE OSTI2025

A tale of two towers: comparing NEON and AmeriFlux data streams at Bartlett Experimental Forest

Long-term ecological data are essential for detecting impacts of climate change and other global change factors, and for making informed predictions about future change. However, long-term measurements are rarely replicated at the site level, which raises questions about their representativeness. We used a multiscale approach to evaluate the agreement of parallel observations from AmeriFlux and NEON (National Ecological Observatory Network) towers at Bartlett Experimental Forest, New Hampshire, USA. The two towers are separated by a horizontal distance of 93 m. Here, we focused our analysis on standard meteorological variables; fluxes of CO 2 , sensible heat, and latent heat measured by eddy covariance; and phenology derived from PhenoCam imagery. Results suggest excellent agreement between AmeriFlux and NEON in meteorology and phenology, and good agreement in fluxes at the half-hourly scale. However, large disagreements in CO 2 and latent heat fluxes occurred at the annual scale, with implications especially for the forest carbon balance. The AmeriFlux tower measurements indicate a site that is close to carbon-neutral (-8 ± 65 g C m -2 y -1 , mean ± 1 SD), whereas the NEON tower measurements indicate a forest that is a carbon sink (-137 ± 10 g C m -2 y -1 ). Causes of this disagreement may include measurement height (26 m vs. 35 m), which resulted in different flux footprints being measured by the two towers, and differences in the flux measurement systems. Our results suggest the need for caution when attempting to merge long-term flux data from two different measurement platforms, and when using measurements from any one measurement platform to inform decision-making on issues related to carbon accounting or natural climate solutions.

Carbon cycle↗
DOE OSTI2025

A minor respiratory process with major global implications: is atmospheric methane oxidation in tree stems driven by stem respiration rather than microbial methanotrophy?

Tree stem surfaces are widely recognized as sites of carbon dioxide (CO₂) efflux and oxygen (O₂) influx, reflecting the dynamics of aerobic respiration of photosynthate substrates, such as sugars, delivered via the phloem. Stems are also largely considered passive conduits for methane (CH₄) produced in anoxic soils via microbial methanogenesis, where CH₄ is thought to be transported upward through the transpiration stream and/or diffusion and emitted through stem surfaces and the canopy. However, recent observations from dynamic stem chambers suggest that stems may also act as active sinks for atmospheric CH₄. Despite these findings, the extent and drivers of stem CH₄ consumption remain poorly characterized across biomes, species, and environmental gradients, and its quantitative relationship to stem respiration has not been established. Moreover, previous studies captured only snapshot fluxes, leaving diurnal patterns of CH₄ exchange uncharacterized. Here, we address these limitations by combining real-time measurements of stem CH₄ and O₂ uptake under ambient conditions in a California cherry tree, using a dynamic stem gas exchange system with three chambers receiving a continuous flow of ambient air and automated chamber and reference air sampling every 10 min. Our results confirm that stems of upland trees can actively consume both atmospheric CH₄ and O₂, but with decreasing temperature sensitivity as daily temperatures increase. Early mornings were marked by rapid influxes of both gases, followed by declining uptake as temperatures rose further. Methane uptake was tightly coupled with O₂ influx and represented a minor (0.012% ± 0.002%) fraction of stem respiratory activity, as determined by concurrent O₂ uptake. These findings suggest that while atmospheric CH₄ oxidation is a minor respiratory process in stems, it is strongly linked with stem physiological activity. This challenges the current assumption that terrestrial CH₄ uptake is driven solely by microbial methanotrophy and raises the possibility that living stem tissues may contribute to CH₄ oxidation through an as-yet-unidentified plant-based mechanism.

Atmospheric greenhouse gases↗
NASA NTRS2002

Monitoring boreal ecosystem phenology with integrated active/passive microwave remote sensing

The important role of the high latitudes in the functioning of global processes is becoming well established. The size and remoteness of arctic and boreal ecosystems, however, pose a challenge to quantification of both terrestrial ecosystem processes and their feedbacks to regional and global climate conditions. Boreal and arctic regions form a complex land cover mosaic where vegetation structure, condition and distribution are strongly regulated by environmental factors such as moisture availability, permafrost, growing season length, disturbance and soil nutrients.

SeaWinds↗
NASA NTRS2019

Land carbon models underestimate the severity and duration of drought’s impact on plant productivity

The ability to accurately predict ecosystem drought response and recovery is necessary to produce reliable forecasts of land carbon uptake and future climate. Using a suite of models from the Multi-scale Synthesis and Terrestrial Model Intercomparison Project (MsTMIP), we assessed modeled net primary productivity (NPP) response to, and recovery from, drought events against a benchmark derived from tree ring observations between 1948 and 2008 across forested regions of the US and Europe. We find short lag times (0–6 months) between climate anomalies and modeled NPP response. Although models accurately simulate the direction of drought legacy effects (i.e. NPP decreases), projected effects are approximately four times shorter and four times weaker than observations suggest. This discrepancy between observed and simulated vegetation recovery from drought reveals a potential critical model deficiency. Since productivity is a crucial component of the land carbon balance, models that underestimate drought recovery time could overestimate predictions of future land carbon sink strength and, consequently, underestimate forecasts of atmospheric CO2.

carbon cycle↗
NASA NTRS2012

An Effort to Map and Monitor Baldcypress Forest Areas in Coastal Louisiana, Using Landsat, MODIS, and ASTER Satellite Data

This presentation discusses a collaborative project to develop, test, and demonstrate baldcypress forest mapping and monitoring products for aiding forest conservation and restoration in coastal Louisiana. Low lying coastal forests in the region are being negatively impacted by multiple factors, including subsidence, salt water intrusion, sea level rise, persistent flooding, hydrologic modification, annual insect-induced forest defoliation, timber harvesting, and conversion to urban land uses. Coastal baldcypress forests provide invaluable ecological services in terms of wildlife habitat, forest products, storm buffers, and water quality benefits. Before this project, current maps of baldcypress forest concentrations and change did not exist or were out of date. In response, this project was initiated to produce: 1) current maps showing the extent and location of baldcypress dominated forests; and 2) wetland forest change maps showing temporary and persistent disturbance and loss since the early 1970s. Project products are being developed collaboratively with multiple state and federal agencies. Products are being validated using available reference data from aerial, satellite, and field survey data. Results include Landsat TM- based classifications of baldcypress in terms of cover type and percent canopy cover. Landsat MSS data was employed to compute a circa 1972 classification of swamp and bottomland hardwood forest types. Landsat data for 1972-2010 was used to compute wetland forest change products. MODIS-based change products were applied to view and assess insect-induced swamp forest defoliation. MODIS, Landsat, and ASTER satellite data products were used to help assess hurricane and flood impacts to coastal wetland forests in the region.

Spruce, Joseph P.↗
NASA NTRS2021

Classifying Forest Type in the National Forest Inventory Context with Airborne Hyperspectral and Lidar Data

Forest structure and composition regulate a range of ecosystem services, including biodiversity, water and nutrient cycling, and wood volume for resource extraction. Forest type is an important metric measured in the US Forest Service Forest Inventory and Analysis (FIA) program, the national forest inventory of the USA. Forest type information can be used to quantify carbon and other forest resources within specific domains to support ecological analysis and forest management decisions, such as managing for disease and pests. In this study, we developed a methodology that uses a combination of airborne hyperspectral and lidar data to map FIA-defined forest type between sparsely sampled FIA plot data collected in interior Alaska. To determine the best classification algorithm and remote sensing data for this task, five classification algorithms were tested with six different combinations of raw hyperspectral data, hyperspectral vegetation indices, and lidar-derived canopy and topography metrics. Models were trained using forest type information from 632 FIA subplots collected in interior Alaska. Of the thirty model and input combinations tested, the random forest classification algorithm with hyperspectral vegetation indices and lidar-derived topography and canopy height metrics had the highest accuracy (78% overall accuracy). This study supports random forest as a powerful classifier for natural resource data. It also demonstrates the benefits from combining both structural (lidar) and spectral (imagery) data for forest type classification.

random forest↗
DOE OSTI2025

Reproductive and leaf litterfall fluxes in forest ecosystem sites globally (1950-2022)

Forest allocation of net primary productivity (NPP) to reproduction is poorly quantified globally, despite its critical role in forest regeneration and a well-supported trade-off with allocation to growth. Although field measurements of total NPP are rare, our work finds that a proxy for reproductive carbon allocation constructed from leaf (L) and reproductive (R) litterfall fluxes, R/(R+L), is strongly correlated with R/NPP, facilitating analysis across a wide range of sites where biometric estimates of NPP are not available (R² = 0.85; Hanbury-Brown et al., 2022, Ward et al., in prep). To investigate relationships between ecosystem-scale reproductive allocation (RA) and climate, soil fertility, and stand age gradients, we conducted a literature search and synthesized 824 observations of annual average leaf and reproductive litterfall fluxes across forest sites globally. The zip file includes 1) a folder Data/ containing the litterfall data ("GlobalForestRA_data.csv") and metadata ("GlobalForestRA_metadata.doc") files. The data file includes geographic coordinates, long-term mean annual temperature and precipitation (1970-2000, extracted from WorldClim2.1), leaf and reproductive litterfall fluxes, sampling interval and protocols, forest characteristics (dominant leaf morphology, information pertaining to forest age and successional stage, and disturbance history) and soil properties (% sand, %silt, %clay, total phosphorus (P), nitrogen (N), cation exchange capacity (CEC) and pH) extracted from SoilGrids250 and from on-site measurements, where available. The metadata file contains information about each variable reported in the data file, including data sources, processing methods, and all references. The Data folder contains two additional files used to create Figure 1; these are described in greater detail in the README.2) R scripts GloalForestRA_analysis.r and GlobalForestRA_SI.r and a folder /Functions used to produce results, figures, and tables in the manuscript Ward et al. (in press)3) a README file describing how the data and R scripts can be used to reproduce statistical results, figures, and tables found in the manuscript. Ward et al. (in press)This repository can also be found at: https://github.com/r-ward/Global_Analysis_ForestRA.Ward, R.E., Zhang-Zheng, H. Aernethy, K., Adu-Bredu, S., Arroyo, L., Bailey, A. et al. (in press). Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally. Ecology Letters. Hanbury-Brown, A.R., Ward, R.E. & Kueppers, L.M. (2022). Forest regeneration within Earth system models: current process representations and ways forward. New Phytol., 235, 20–40.Ward et al. (2025), Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally, in prep.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2019

Long-Term Impacts of Selective Logging on Amazon Forest Dynamics from Multi-Temporal Airborne LiDAR

Forest degradation is common in tropical landscapes, but estimates of the extent and duration of degradation impacts are highly uncertain. In particular, selective logging is a form of forest degradation that alters canopy structure and function, with persistent ecological impacts following forest harvest. In this study, we employed airborne laser scanning in 2012 and 2014 to estimate three-dimensional changes in the forest canopy and understory structure and aboveground biomass following reduced-impact selective logging in a site in Eastern Amazon. Also, we developed a binary classification model to distinguish intact versus logged forests. We found that canopy gap frequency was significantly higher in logged versus intact forests even after 8 years (the time span of our study). In contrast, the understory of logged areas could not be distinguished from the understory of intact forests after 6–7 years of logging activities. Measuring new gap formation between LiDAR acquisitions in 2012 and 2014, we showed rates 2 to 7 times higher in logged areas compared to intact forests. New gaps were spatially clumped with 76 to 89% of new gaps within 5 m of prior logging damage. The biomass dynamics in areas logged between the two LiDAR acquisitions was clearly detected with an average estimated loss of -4.14 +/- 0.76 MgC/hay. In areas recovering from logging prior to the first acquisition, we estimated biomass gains close to zero. Together, our findings unravel the magnitude and duration of delayed impacts of selective logging in forest structural attributes, confirm the high potential of airborne LiDAR multitemporal data to characterize forest degradation in the tropics, and present a novel approach to forest classification using LiDAR data.

Pinage, Ekena Rangel↗
DOE OSTI2024

Tree drought physiology: critical research questions and strategies for mitigating climate change effects on forests

Droughts of increasing severity and frequency are a primary cause of forest mortality associated with climate change. Yet, fundamental knowledge gaps regarding the complex physiology of trees limit the development of more effective management strategies to mitigate drought effects on forests. Here, in this work, we highlight some of the basic research needed to better understand tree drought physiology and how new technologies and interdisciplinary approaches can be used to address them. Our discussion focuses on how trees change wood development to mitigate water stress, hormonal responses to drought, genetic variation underlying adaptive drought phenotypes, how trees ‘remember’ prior stress exposure, and how symbiotic soil microbes affect drought response. Next, we identify opportunities for using research findings to enhance or develop new strategies for managing drought effects on forests, ranging from matching genotypes to environments, to enhancing seedling resilience through nursery treatments, to landscape-scale monitoring and predictions. We conclude with a discussion of the need for co-producing research with land managers and extending research to forests in critical ecological regions beyond the temperate zone.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1994

(abstract) Monitoring the Freeze/Thaw Transitions in Taiga Forests Using ERS-1 SAR

Automated recording stations have been installed at the Bonanza Creek Experimental Forest, a Long Term Ecological Research (LTER) site located near Fairbanks, Alaska, in a forest stand of the Tanana River floodplain underlain by discontinuous permafrost. These stations provide a continuous record of dielectric constant and temperature of tree trunks, and soil moisture and temperature profiles down to the root zone. Along with the weather stations deployed at the same location, these measurements provide a continuous record of the environmental and phenologic conditions of the forest during a complete seasonal cycle. At the same time, ERS-1 SAR imaged the study site repeatedly from space to provide radar backscatter measurements of the forest approximately three times a month. Here, we examine the temporal dynamic of ERS-1 SAR measurements in relation with the changing environmental and phenologic state of the forest canopy and of the forest ground layers during the winter/spring and fall/winter transitions of 1992 and 1993. During these transitions, we examine whether changes in radar backscatter observed by ERS-1 may be related to freezing or thawing of the soil and vegetation in order to determine the start and end of the growing season for the forest. The results of this analysis are used in turn to determine whether similar changes are observed over larger regions. Mosaics of SAR data generated along three different North-South Alaskan ERS-1 transects that intercept with our study site are used in combination with hourly air temperature and daily precipitation rates gathered at airport weather stations by the National Weather Service. Results obtained using ERS-1 data collected from January 1992 to mid-1993 will be discussed.

permafrost temporal dynamics Alaska ecology radar ↗
NASA NTRS1995

Geographic information analysis: An ecological approach for the management of wildlife on the forest landscape

This document is a summary of the project funded by NAGw-1460 as part of the Earth Observation Commericalization/Applications Program (EOCAP) directed by NASA's Earth Science and Applications Division. The goal was to work with several agencies to focus on forest structure and landscape characterizations for wildlife habitat applications. New analysis techniques were used in remote sensing and landscape ecology with geographic information systems (GIS). The development of GIS and the emergence of the discipline of landscape ecology provided us with an opportunity to study forest and wildlife habitat resources from a new perspective. New techniques were developed to measure forest structure across scales from the canopy to the regional level. This paper describes the project team, technical advances, and technology adoption process that was used. Reprints of related refereed journal articles are in the Appendix.

Ripple, William J.↗
NASA NTRS2024

Southern Indiana Ecological Conservation: Assessing Canopy Cover Dynamics and Forest Type Groupings in Southern Indiana to Inform Restoration Activities

As human influence continues to negatively impact natural habitats, timely assessment of ecosystem changes and restoration is critical to protect forest health and biodiversity. In our study, we focused on oak-hickory forests in southern Indiana. Oak-hickory forests were the dominant ecosystem dynamic in present-day Indiana for centuries until European colonization, which brought about fire suppression and, eventually, fire exclusion. Anthropogenic fire exclusion in this fire-adapted habitat led to the encroachment of mesic species, such as beech and maple trees. This process, commonly referred to as mesophication, was the focus of our study. Our team performed a feasibility study in using NASA Earth observations to support our end-user partners, Let the Sun Shine In and the US Forest Service, Hoosier National Forest, in their selection of oak-hickory restoration sites. To aid in our analysis of the forest dynamics of southern Indiana, our team used Landsat 5, 8, and 9 imageries, along with other ancillary datasets to create maps to illustrate areas that would most benefit from partners’ forest restoration and management practices. By constructing a Green Vegetation Fraction change map across our 39-year study period (1984-2023) to visualize the change in forest cover and creating a restoration suitability assessment map to reveal sites that met requirements for oak-hickory growth, we provided our partners with suitable site selection for restorative management and found that 3.3% of our entire study area and 4.4% of the Hoosier National Forest were deemed suitable. Our feasibility study benefits southern Indiana restoration by aiding our partners in efficiently selecting sites for prescribed burning, forest thinning, and other restoration management practices.

restoration↗