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NASA NTRS1987

The Arctic tropopause fold

Analyses of research-aircraft observations, satellite total-columnar-ozone retrievals, and synoptic upper-air soundings are used to describe the structure of Arctic jetstreams and their associated frontal zones and tropopause folds. These analyses document the presence of major tropopause folding events within the Arctic that occur at the flanks of large-scale (about 2000 km) polar vortices. One example shows a solar vortex and its associated tropopause fold and Arctic front that migrated from the high Canadian Arctic southward into midlatitudes over central North America. Total columnar ozone measurements from the Total Ozone Mapping Spectrometer are shown to identify the location of polar vortices and the mesoscale (about 200 km) ozone gradients at the flanks of these vortices, which coincide with regions of Arctic tropopause folding and associated stratospheric-tropospheric exchange processes.

Shapiro, M. A.↗

NASA NTRS2000

Ten-fold augmentation of endothelial uptake of vascular endothelial growth factor with ultrasound after systemic administration

OBJECTIVES: In this study, the feasibility of delivering and enhancing the uptake of vascular endothelial growth factor (VEGF) into the intact endothelium by using ultrasound (US) facilitation was determined. BACKGROUND: A limitation of tissue-targeted drug delivery is the need for direct arterial cannulation. We postulate a mechanism by which agents injected intravenously may be targeted to a tissue using US and ultrasonic contrast agents. METHODS: We used a rat model to test the ability of US and an ultrasonic contrast agent perflurocarbon exposed sonicated dextrose albumin (PESDA) to increase uptake of VEGF in the myocardium. Continuous wave Doppler US (0.6 W/cm2 at 1 MHz for 15 min) was applied to the chest wall overlying the myocardium during intravenous injection with either VEGF (100 microg/kg) alone or a combination of VEGF and PESDA (0.1%). Control rats had VEGF infused without US or PESDA. The VEGF uptake was measured quantitatively in the heart, lung, liver and kidneys by enzyme-linked immunosorbent assay (ng/g of tissue) and morphologically by fluorescence microscopy. RESULTS: There was an eight-fold increase in VEGF uptake in the heart by US alone (16.86 +/- 1.56 vs. 2.11 +/- 0.953 ng/g of tissue, p < 0.0001) and a 13-fold increase with US + PESDA (26.78 +/- 2.88 vs. 2.11 +/- 0.953 ng/g of tissue, p < 0.0001) compared with control rats. Fluorescence microscopy revealed deposition of VEGF in the endothelium of small intramyocardial arterioles. CONCLUSIONS: These results show a marked increase in endothelial VEGF uptake with US and US + PESDA. Thus, US may be used to augment endothelial VEGF uptake 10-fold to 13-fold.

Non-NASA Center↗

NASA NTRS2007

High-Temperature Characterization of Alumina Substrates and Folded Slot Antenna

The characterization of 99.6% polycrystalline alumina substrates and folded slot antennas is presented in this paper. Coplanar Waveguide (CPW) calibration standards where fabricated on 99.6% polycrystalline alumina substrates. Thru-Reflect-Line (TRL) calibrations were performed at temperatures of 25 to 400 C over a frequency range from 0.5 to 50 GHz. The effective dielectric constant of the alumina substrates was determined to be relatively constant at 5.4 from 25 to 200 C and then increased steadily to approximately 6 at 400 C. The loss of the CPW lines increased as temperature and frequency increased as well noting that the increase in loss is even more profound as both the temperature and frequency increased simultaneously. A CPW fed folded slot antenna fabricated on the alumina substrates is also presented. The Return Loss (RL) of a CPW fed folded slot antenna exhibits a self impedance matching technique. The RL of the folded slot antenna at 25 C displays a resonance at 3.5 GHz and is approximately 16 dB in magnitude. At 300 C the resonance shifts down in frequency to approximately 3.3 dB and has roughly the same magnitude. However the loss of the antenna response also increases at this elevated temperature. This work is part of the initial stages of an effort at NASA Glenn research Center to develop wireless sensors for harsh environments. This work can reduce cost, space to house all the hard wired connections, and reduce the weight of the overall units such as aerospace engines and allow for the placement of the wireless sensors in the engine which are not possible with hard wired sensors.

Scardelletti, Maximilian C.↗

NASA NTRS2003

Folded Resonant Horns for Power Ultrasonic Applications

Folded horns have been conceived as alternatives to straight horns used as resonators and strain amplifiers in power ultrasonic systems. Such systems are used for cleaning, welding, soldering, cutting, and drilling in a variety of industries. In addition, several previous NASA Tech Briefs articles have described instrumented drilling, coring, and burrowing machines that utilize combinations of sonic and ultrasonic vibrational actuation. The main advantage of a folded horn, relative to a straight horn of the same resonance frequency, is that the folded horn can be made shorter (that is, its greatest linear dimension measured from the outside can be made smaller). Alternatively, for a given length, the resonance frequency can be reduced. Hence, the folded-horn concept affords an additional degree of design freedom for reducing the length of an ultrasonic power system that includes a horn.

Sherrit, Stewart↗

NASA NTRS2019

A Performance Analysis of Folding Conformal Propeller Blade Designs

NASA’s X-57 Maxwell flight demonstrator has a high-lift system that includes 12 fixed- pitch high-lift propellers located upstream of the wing leading edge for lift augmentation at low speeds. These high-lift propellers are only required at low speeds, and to reduce drag, the propeller blades are folded conformally along the nacelles at other operating conditions. The method of designing the high-lift blades permits several variations of blade cross-section placement along the nacelle surface and a comparative performance analysis was needed to determine if any particular design showed significant benefits. We analyzed the performance of three conformal high-lift propeller designs and compared them to that of a non-conformal baseline propeller to establish both the benefit of stowable blades and the value of each variation. In this study, we first performed a drag analysis of each design in the stowed configuration at the X-57 cruise speed and altitude to determine the drag benefits of each conforming method. Then, among blade designs we compared the thrust, power, and lift for a given input shaft speed to establish any performance losses from the baseline. This analysis shows that the conformal blade designs do not have any appreciable performance losses compared to the baseline blades. Moreover, although the drag in the cruise condition is significantly less than for the non-folding baseline, the drag benefits of each conforming blade approach are similar and the value of each approach largely depends on the ease of integration into the nacelle. This paper presents the results of these studies and discusses the benefits and drawbacks of implementing the conformal blade designs. Specifically, we demonstrate that folding, conformal propeller blades contribute significantly less to cruise drag when compared to windmilling, with an increase relative to a. We also show a less than 1% difference in performance formal, folding propellers and the non-conforming baseline propeller.

Litherland, Brandon L.↗

NASA NTRS2022

Molecular information theory meets protein folding

We propose an application of molecular information theory to analyze the folding of single domain proteins. We analyze results from various areas of protein science, such as sequence-based potentials, reduced amino acid alphabets, backbone configurational entropy, secondary structure content, residue burial layers, and mutational studies of protein stability changes. We found that the average information contained in the sequences of evolved proteins is very close to the average information needed to specify a fold ~2.2 ± 0.3 bits/(site operation). The effective alphabet size in evolved proteins equals the effective number of conformations of a residue in the compact unfolded state at around 5. We calculated an energy-to-information conversion efficiency upon folding of around 50%, lower than the theoretical limit of 70%, but much higher than human built macroscopic machines. We propose a simple mapping between molecular information theory and energy landscape theory and explore the connections between sequence evolution, configurational entropy and the energetics of protein folding.

Ignacio E. Sánchez↗

NASA NTRS1999

Early events in the folding of an amphipathic peptide: A multinanosecond molecular dynamics study

Folding of the capped LQQLLQQLLQL peptide is investigated at the water-hexane interface by molecular dynamics simulations for 161.5 ns. Initially placed in the aqueous phase as a beta-strand, the peptide rapidly adsorbs to the interface, where it adopts an amphipathic conformation. The marginal presence of nonamphipathic structures throughout the complete trajectory indicates that the corresponding conformations are strongly disfavored at the interface. It is further suggestive that folding in an interfacial environment proceeds through a pathway of successive amphipathic intermediates. The energetic and entropic penalties involved in the conformational changes along this pathway markedly increase the folding time scales of LQQLLQQLLQL, explaining why the alpha-helix, the hypothesized lowest free energy structure for a sequence with a hydrophobic periodicity of 3.6, has not been reached yet. The formation of a type I beta-turn at the end of the simulation confirms the importance of such motifs as initiation sites allowing the peptide to coalesce towards a secondary structure. Proteins 1999;36:383-399. Copyright 1999 Wiley-Liss, Inc.

NASA Center ARC↗

DOE OSTI2025

COCOMO2: A Coarse-Grained Model for Interacting Folded and Disordered Proteins

Biomolecular interactions are essential in many biological processes, including complex formation and phase separation processes. Coarse-grained computational models are especially valuable for studying such processes via simulation. Here, we present COCOMO2, an updated residue-based coarse-grained model that extends its applicability from intrinsically disordered peptides to folded proteins. This is accomplished with the introduction of a surface exposure scaling factor, which adjusts interaction strengths based on solvent accessibility, to enable the more realistic modeling of interactions involving folded domains without additional computational costs. COCOMO2 was parametrized directly with solubility and phase separation data to improve its performance on predicting concentration-dependent phase separation for a broader range of biomolecular systems compared to the original version. COCOMO2 enables new applications including the study of condensates that involve IDPs together with folded domains and the study of complex assembly processes. COCOMO2 also provides an expanded foundation for the development of multiscale approaches for modeling biomolecular interactions that span from residue-level to atomistic resolution.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2025

Correction to “COCOMO2: A Coarse-Grained Model for Interacting Folded and Disordered Proteins”

Molecular interactions↗

DOE OSTI2024

Non-averaged single-molecule tertiary structures reveal RNA self-folding through individual-particle cryo-electron tomography

Large-scale and continuous conformational changes in the RNA self-folding process present significant challenges for structural studies, often requiring trade-offs between resolution and observational scope. Here, we utilize individual-particle cryo-electron tomography (IPET) to examine the post-transcriptional self-folding process of designed RNA origami 6-helix bundle with a clasp helix (6HBC). By avoiding selection, classification, averaging, or chemical fixation and optimizing cryo-ET data acquisition parameters, we reconstruct 120 three-dimensional (3D) density maps from 120 individual particles at an electron dose of no more than 168 e - Å -2 , achieving averaged resolutions ranging from 23 to 35 Å, as estimated by Fourier shell correlation (FSC) at 0.5. Each map allows us to identify distinct RNA helices and determine a unique tertiary structure. Statistical analysis of these 120 structures confirms two reported conformations and reveals a range of kinetically trapped, intermediate, and highly compacted states, demonstrating a maturation folding landscape likely driven by helix-helix compaction interactions.

36 MATERIALS SCIENCE↗

NASA NTRS1972

Large scale wind tunnel investigation of a folding tilt rotor

A twenty-five foot diameter folding tilt rotor was tested in a large scale wind tunnel to determine its aerodynamic characteristics in unfolded, partially folded, and fully folded configurations. During the tests, the rotor completed over forty start/stop sequences. After completing the sequences in a stepwise manner, smooth start/stop transitions were made in approximately two seconds. Wind tunnel speeds up through one hundred and seventy-five knots were used, at which point the rotor mast angle was increased to four degrees, corresponding to a maneuver condition of one and one-half g.

Source record↗

NASA NTRS1974

Digital controller for a Baum folding machine

A digital controller for controlling the operation of a folding machine enables automatic folding of a desired number of sheets responsive to entry of that number into a selector. The controller includes three decade counter stages for corresponding rows of units, tens and hundreds push buttons. Each stage including a decimal-to-BCD encoder, a buffer register, and a digital or binary counter. The BCD representation of the selected count for each digit is loaded into the respective decade down counters. Pulses generated by a sensor and associated circuitry are used to decrease the count in the decade counters. When the content of the decade counter reaches either 0 or 1, a solenoid control valve is actuated which interrupts operation of the machine. A repeat switch, when actuated, prevents clearing of the buffer registers so that multiple groups of the same number of sheets can be folded without reentering the number into the selector.

Bryant, W. H.↗

NASA NTRS1975

Tectonic analysis of folds in the Colorado plateau of Arizona

Structural mapping and analysis of folds in Phanerozoic rocks in northern Arizona, using LANDSAT-1 imagery, yielded information for a tectonic model useful in identifying regional fracture zones within the Colorado Plateau tectonic province. Since the monoclines within the province developed as a response to differential movements of basement blocks along high-angle faults, the monoclinal fold pattern records the position and trend of many elements of the regional fracture system. The Plateau is divided into a mosaic of complex, polyhedral crustal blocks whose steeply dipping faces correspond to major fracture zones. Zones of convergence and changes in the trend of the monoclinal traces reveal the corners of the blocks. Igneous (and salt) diapirs have been emplaced into many of the designated zones of crustal weakness. As loci of major fracturing, folding, and probably facies changes, the fractures exert control on the entrapment of oil and gas.

Davis, G. H.↗

NASA NTRS1982

Protein folding, protein structure and the origin of life: Theoretical methods and solutions of dynamical problems

Theoretical methods and solutions of the dynamics of protein folding, protein aggregation, protein structure, and the origin of life are discussed. The elements of a dynamic model representing the initial stages of protein folding are presented. The calculation and experimental determination of the model parameters are discussed. The use of computer simulation for modeling protein folding is considered.

Weaver, D. L.↗

NASA NTRS1985

The Presidents' Day cyclone of 18-19 February 1979 - Influence of upstream trough amplification and associated tropopause folding on rapid cyclogenesis

The Presidents' Day cyclone of 18-19 February, 1979 is analyzed based on conventional radiosonde data, infrared and visible satellite imagery, water vapor images and ozone measurement. The well-known synoptic-scale characteristics of the PJ-trough system are described, and evidence for the development of the tropopause fold are presented. Processes contributing to the formation of the fold are discussed in terms of an evaluation of the Sawyer-Eliassen circulation equation and a diagnostic evaluation of the ageostrophic winds and vertical motion near the polar jet streak. The documentation of stratospheric extrusions and their possible role in cyclogenesis is reviewed, and Eulerian and Lagrangian diagnostics are used to establish a connection between the tropopause fold associated with the polar jet streak and rapid cyclogenesis along the East Coast. Conservation of potential vorticity expressed in isentropic coordinates is used as a constraint from which to view cyclogenesis.

Uccellini, L. W.↗

NASA NTRS1985

Structural Mapping of Folded Sedimentary Environments from Satellite Images: an Example from Central Asia

In the Tadjik Depression, in Soviet Central Asia, in the absence of existing geologic or topographic maps, an enhanced LANDSAT multispectral scanner image was used in combination with field data to produce a 1:250000 geologic map of the Vakhsh fold-and-thrust belt and adjacent autochthon. Several structural conclusions are reached as a result of this mapping. Deformation of the Cretaceous and Tertiary strata of the fold-and-thrust belt is, in the central Tadjik Depression, conspicuously absent north of a buried basement fault that marks the hinge-zone of the Late Mesozoic passive margin. But, in the eastern half of the depression, thrusting has moved coherent sheets northward, over the block fault, these sheets now lie flat atop the autochthon to the north. The crustal structure inherited from the Mesozoic extensional phase has strongly influenced the Late Cenozoic pattern of deformation, producing the fold-and-thrust belt that is markedly asymmetric. The development of the thrust system has included the progressive overlapping of thrust: the later thrusts apparently formed internal to the older thrusts, and subsequently overrode them.

Leith, W.↗

NASA NTRS1987

Tropopause fold structure determined from airborne lidar and in situ measurements

Airborne differential absorption lidar and in situ data obtained during the April 20, 1984 flight experiment conducted over Nevada and California are analyzed. The O3 and aerosols profiles and in situ measurements reveal a 2.0-km-deep layer (with high O3 concentrations and enhanced aerosol backscattering) and a correlation of 0.8 between O3 and aerosol backscatter (with both values decreasing about 25 percent along the central axis of the fold). It is observed that the cold boundary of the fold has weaker gradients, larger-scale undulations, and more irregularity than the warm boundary. The potential vorticity distribution along the flight path was derived from radiosonde data. A positive correlation between the O3 mixing ratio and the potential vorticity values in the fold is detected; the average ratio between O3 and potential vorticity is 50.2 ppbv/10 to the -5th sq cm deg per g s.

Browell, E. V.↗

NASA NTRS1991

Faulting and folding in the formation of planetary wrinkle ridges

Topographic profiles for planetary wrinkle ridges compiled from high-resolution Lunar Topographic Orthophoto maps for the moon and from monoscopic photoclinometry data for Mars reveal that many of these ridges are characterized by an elevation offset between one side of a ridge and the other. To investigate the relative importance of faulting and folding in the formation of planetary wrinkle ridges, this paper develops a model of subsurface structure, based on observations and measurements of surface physiography and topography by Golombek and Franklin (1987) and Plescia (1990), and assumptions of subsurface structure, which makes it possible to estimate shortening across wrinkle ridges on Moon and Mars. According to this model, total ridge shortening is on the order of 100 m; shortening due to faulting exceeds shortening due to folding for fault dips up to 60-80 deg, implying that faults beneath many wrinkle ridges break the surface to accomodate the greater displacement along the fault than is accomodated in the fold.

Golombek, M. P.↗