The effect of cosmological expansion on self-gravitating ensembles of particles
Galactic clusters evolution in universe with zero rest mass particles, showing size dependence on cosmic dust energy density
Noerdlinger, P. D.↗
SEARCH · Engineering Papers
Results for “ensemble clustering”
Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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Observing flow of He II with unsupervised machine learning
Abstract Time dependent observations of point-to-point correlations of the velocity vector field (structure functions) are necessary to model and understand fluid flow around complex objects. Using thermal gradients, we observed fluid flow by recording fluorescence of $${\text{He}}_{2}^{*}$$ He 2 ∗ excimers produced by neutron capture throughout a ~ cm 3 volume. Because the photon emitted by an excited excimer is unlikely to be recorded by the camera, the techniques of particle tracking (PTV) and particle imaging (PIV) velocimetry cannot be applied to extract information from the fluorescence of individual excimers. Therefore, we applied an unsupervised machine learning algorithm to identify light from ensembles of excimers (clusters) and then tracked the centroids of the clusters using a particle displacement determination algorithm developed for PTV.
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
Parameters Inference and Model Reduction for the Single-Particle Model of Li Ion Cells
The Single-Particle Model (SPM) of Li ion cell is a computationally efficient model for simulating Li ion cell for weak to moderate currents. The model depends n a number of parameters describing the geometry and material properties of a cell components. In order to apply the model to simulating a cell, the best-fit parametric values have to be inferred from a constant discharge data. We report our efforts to determine the best-fit set for 18650 LP batteries. We found that rather than being best-fit by a particular point in the parametric space the data is fit equally well by an ensemble of points clustering about an effective multidimensional manifold in the parametric space. This property of the SPM is known to be shared by a multitude of the so-called "sloppy models" of complex systems, characterized by a few stiff directions in the parametric space, in which the predicted behavior varies significantly, and a number of sloppy directions in which the behavior doesn't change appreciably. Only the stiff parameters combinations are identifiable. Geometrical features of the BFM give insights to possible reduction of the SPM to a model having fewer sloppy parameters. We have constructed a hierarchy of such models. The fully reduced model depends on only stiff effective parameters which are identifiable and can be used for characterization of the battery's state of health.
Khasin, Michael↗
Ensemble Effects on Hydroxide Bond Dissociation Free Energies in Polyoxovanadate Clusters
Understanding structure-property relationships is foundational to numerous modern chemistries, such as proton-coupled electron transfer (PCET). However, an experimentally measured property is the result of the behavior from an ensemble of molecules. Neglecting ensemble effects, especially under complex chemical environments, may obfuscate these relationships and lead to discrepancies between theory and experiment. In this work, we demonstrate the impact of configurational entropy and local chemical environments on hydroxide bond dissociation free energies [BDFE- (O−H)] for a set of polyoxovanadate nanoclusters, at ambient conditions. The O−H bond strengths are investigated via density functional theory (DFT) coupled with statistical thermodynamic analysis and bilinear modeling, and compared with previous experimental results on the same systems, namely electrochemical solutions of: [V 6 O 13−x (OH) x (TRIOL R ) 2 ] −2 (x = 2, 4, 6; R = NO 2 , Me) and [V 6 O 11−x (OMe) 2 (OH) x (TRIOL NO 2 ) 2 ] −2 (x = 2, 4). Interestingly, we find that ensemble effects, even at room temperature, can account for a significant portion of the BDFE(O−H) trend with the degree of reduction via H atom binding, which cannot be fully captured by single-structure, static DFT calculations. Moreover, we find that the ensemble effects may be replicated statistically, requiring only enumeration of energetically accessible H-binding sites. With the ensemble effects resolved, we present a simple bilinear model to reconcile remaining biases between experiment and ensemble-informed theory, which corelate with clusterspecific electronic environment differences. The bilinear model achieves outstanding accuracy vs experiments with a root-mean squared error of 0.4 kcal/mol. Finally, based on the physicochemical characteristics of hydrogen interaction with polyoxometalates, we present a simple methodology that captures the BDFE(O−H) trend while dramatically reducing required DFT calculations by 98% and achieving accuracy within 1 kcal/mol. Overall, this work elucidates the roles and structural origins of configurational entropy and chemical effects on polyoxometalate hydroxide bond energies, with potential applicability to various atomically precise metal oxide systems. Importantly, it introduces models for rapid and highly accurate property calculations in connection with experiments.
Cluster chemistry↗
Catalytic Activity of an Ensemble of Sites for CO 2 Hydrogenation to Methanol on a ZrO 2 -on-Cu Inverse Catalyst
The significant increase in CO 2 emissions from heavy fossil fuel utilization has raised serious concerns, highlighting the need for effective methods to convert CO 2 into value-added chemicals. Here, in this work, we report a computational investigation on the catalytic activity of ZrO 2 -on-Cu inverse catalysts for CO 2 hydrogenation to methanol, considering highly dispersed ZrO 2 trimers on Cu (111). Such clusters present a large ensemble of formate-containing configurations, Zr 3 O n (OH) m (OCHO) l , making the evaluation of the catalytic activity very challenging. We found that the sites on the various catalyst configurations exhibit markedly different activities for formate hydrogenation, despite their similar free energy and composition. To understand these differences in reactivity, we examined the structural and electronic nature of the low free-energy catalyst configurations and identified that the energy of the lowest unoccupied orbital of the reacting formate, modified by its binding with the catalytic site, is a descriptor for the reaction energy of the formate hydrogenation step. From there, we screened an ensemble of catalyst structures using this descriptor to predict highly active metastable catalyst configurations and computed the reaction pathways and transition states for formate hydrogenation. From this investigation, we distinguished reactive from nonreactive sites and formate species on the ZrO 2 /Cu inverse catalyst based on structural and electronic features. We showed that rare metastable configurations control the activity. Additionally, an efficient method for examining the reactivity of a large number of coexisting catalyst structures was developed.
catalysts↗
Repeating sources of classical gamma-ray bursts
From an analysis of the first catalog of the Burst and Transient Source Experiment (BATSE) experiment (Fishman et al. 1993, 1994a) on the Compton Gamma Ray Observatory (CGRO), we find an excessive number of pairs of gamma-ray bursts which are clustered in both a space and time . The angular separation between the two bursts in each pair is less than their positional uncertainties, and the interval between their occurrence times is within several days. Optimizing the signal, we find that the probability of observing such a clustered excess froma Poisson ensemble is approximately 2 x 10(exp -5). We suggest that these bursts arise from repeating sources. A detailed study of the most prolific source, GBS 0855-00, is presented in a separate paper (Wang & Lingenfelter 1993a, b). Unlike most of the 'soft' gamma-ray repeaters, these repeating bursts have relatively hard spectra, complex light curves, and widely varying durations, that are indistinguishable from classical gamma-ray bursts. Although the significance of the clustered excess was optimized a posteriori, because it depends on temporal and spatial bin sized that could not be defined a priori, we can use the optimizations from the first catalog to test subsequent BATSE data sets. Unfortunately, the failure of the on-board tape recorders during the second catalog period seriously reduced the number of accurately positioned bursts (Fishman et al. 1994b), so that we can neither confirm, nor refute, the predicted repitition in that sample, and we must await the results of the third catalog.
Wang, V. C.↗
The application of optical potentials for reactive scattering - A case study
A precise method is presented for measuring decay fractions of metastable cluster ions with corrections concerning instrumental artifacts and ion trajectory of parents and daughters. Experimental data are used to derive the Gspann parameter and heat capacity of clusters as described in Klots' evaporative ensemble model. The model is applied to obtain binding energies of ammonia cluster ions. The deduced binding energy values are in very good agreement with both thermochemical data and Engelking's (1986) modified statistical theory.
Neuhauser, Daniel↗
Deducing subnanometer cluster size and shape distributions of heterogeneous supported catalysts
Abstract Infrared (IR) spectra of adsorbate vibrational modes are sensitive to adsorbate/metal interactions, accurate, and easily obtainable in-situ or operando. While they are the gold standards for characterizing single-crystals and large nanoparticles, analogous spectra for highly dispersed heterogeneous catalysts consisting of single-atoms and ultra-small clusters are lacking. Here, we combine data-based approaches with physics-driven surrogate models to generate synthetic IR spectra from first-principles. We bypass the vast combinatorial space of clusters by determining viable, low-energy structures using machine-learned Hamiltonians, genetic algorithm optimization, and grand canonical Monte Carlo calculations. We obtain first-principles vibrations on this tractable ensemble and generate single-cluster primary spectra analogous to pure component gas-phase IR spectra. With such spectra as standards, we predict cluster size distributions from computational and experimental data, demonstrated in the case of CO adsorption on Pd/CeO 2 (111) catalysts, and quantify uncertainty using Bayesian Inference. We discuss extensions for characterizing complex materials towards closing the materials gap.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Multi-Wheat-Model Ensemble Responses to Interannual Climate Variability
We compare 27 wheat models' yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981e2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models' climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R2 0.24) was found between the models' sensitivities to interannual temperature variability and their response to long-termwarming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts.
uncertainty↗
The kinematics of dense clusters of galaxies. 3: Comparison with cosmological models
We compare the combined distribution of 31 group and 25 cluster velocity dispersions with the ensemble of 32 models for the formation and evolution of large-scale structure examined by Weinberg & Cole (1992). The models include Gaussian and non-Gaussian initial fluctuations, different power law spectra (n = -1, n = 0, n = -2, 'pancake'), flat (Omega = 1) and open (Omega = 0.2) cosmologies, and unbiased (b(sub 8) = 1) and biased (b(sub 8) = 2) galaxy formation. The set of initial conditions we test, although limited, samples enough parameter space to indicate which general classes of models are consistent with the data. The two Gaussian, n = -1 models which best approximate the standard and open Cold Dark Matter (CDM) models do not match the observed distribution of velocity dispersions; models with b(sub 8) = 2 and Omega = 1 ('standard') or b(sub 8) = 1 and Omega = 0.2 ('open') predict too large a ratio of low to high velocity dispersion systems. A 'COBE-normalized' CDM model with b(sub 8) = 1 and Omega = 1 produces clusters with velocity dispersions higher than those measured. All three models overestimate the total abundance of systems.
Zabludoff, Ann I.↗
The optimization of model ensemble composition and size can enhance the robustness of crop yield projections
Linked climate and crop simulation models are widely used to assess the impact of climate change on agriculture. However, it is unclear how ensemble configurations (model composition and size) influence crop yield projections and uncertainty. Here, we investigate the influences of ensemble configurations on crop yield projections and modeling uncertainty from Global Gridded Crop Models and Global Climate Models under future climate change. We performed a cluster analysis to identify distinct groups of ensemble members based on their projected outcomes, revealing unique patterns in crop yield projections and corresponding uncertainty levels, particularly for wheat and soybean. Furthermore, our findings suggest that approximately six Global Gridded Crop Models and 10 Global Climate Models are sufficient to capture modeling uncertainty, while a cluster-based selection of 3-4 Global Gridded Crop Models effectively represents the full ensemble. The contribution of individual Global Gridded Crop Models to overall uncertainty varies depending on region and crop type, emphasizing the importance of considering the impact of specific models when selecting models for local-scale applications. Our results emphasize the importance of model composition and ensemble size in identifying the primary sources of uncertainty in crop yield projections, offering valuable guidance for optimizing ensemble configurations in climate-crop modeling studies tailored to specific applications.
Agriculture↗
Automated Tracking of Shallow Cu Growth Rates on Geostationary Imagery and Linkages to Cloud Organization
Shallow moist convection is ubiquitous throughout the tropics and represents a key player in boundary layer processes. Common tropical cloud features, such as convective rolls and cold pool fronts, form and persist for different periods within environments that support such development. Determining differences in lifecycle amongst these features in varying environments requires viewing their evolution from initiation to decay. Geostationary satellites provide a means to follow the clouds with enhanced spatiotemporal sampling from space. We apply a cloud-tracking tool to study lifecycle properties of shallow cumulus sampled during the NASA Cloud, Aerosol, and Monsoon Processes Philippines Experiment (CAMP2Ex) field campaign of 2019. The mission conducted airborne and shipborne operations over the West Pacific Ocean, in tandem with Rapid Scan imagery from the Advanced Himawari Imager (AHI) on the Japan Meteorological Agency’s (JMA) Himawari-8 satellite. Shallow cumulus was segmented on AHI 0.5-km visible reflectance and tracked during the daylit hours of several research flights that exhibited ideal atmospheric conditions for tracking. The resulting cloud tracks were collected according to regions containing airborne sampling of individual clouds at various stages of their lifecycles, yielding ensembles of tracks in separate environments. We present an analysis on lifecycle properties extracted from the cloud-track ensembles and their potential connections to cloud organizations observed throughout CAMP2Ex. Each ensemble is evaluated by calculating cloud-layer growth rates and comparing to spatial parameters, including track-achieved area and cloud-top height. The apparent clustering of growth rates for specific ensembles is then compared against overall cloud organizations, such as isolated congestus and cold pool fronts, that are observed with the airborne data. Finally, we consider how such differences in cloud growth appear in the airborne radar observations of intercepted cloud tracks.
Cloud Tracking↗
Extinction and backscatter measurements of Antarctic PSC's, 1987: Implications for particle and vapor removal
The temperature dependence is examined of optical properties measured in the Antarctic during 1987 at the 70 mb level (near 18 km), a level chosen to correlate the results with in situ measurements made from the NASA-Ames ER-2 aircraft during the 1987 Airborne Antarctic Ozone Experiment (AAOE). The data set consists of extinction measurements by Sam 2 inside the Antarctic polar vortex from May to October 1987; and backscatter measurements by the UV-DIAL (Ultraviolet Differential Absorption Lidar) system aboard the Ames DC-8 aircraft during selected AAOE flights. Observed trends are compared with results from a revised version of Pole and McCormick's model to classify the PSC observations by Type (1 or 2) and infer the temporal behavior of the ambient aerosol and ambient vapor mixing ratios. The sample figures show monthly ensembles of the 70-mb Sam 2 extinction ratio (the ratio of aerosol or PSC extinction to molecule extinction) as a function of NMC temperature at the beginning (June) and (October) of the 1987 Antarctic winter. Both ensembles show two rather distinct clusters of points: one oriented in the near vertical direction which depicts the change with temperature of the ambient aerosol extinction ratio; and a second cluster oriented in the near horizontal direction whose position on the vertical scale marks a change in particle phase (i.e., PSC formation) and whose length (the extinction enhancement related to that of the ambient aerosol) is an indicator of PSC type.
Poole, L. R.↗
Classification of posture maintenance data with fuzzy clustering algorithms
Sensory inputs from the visual, vestibular, and proprioreceptive systems are integrated by the central nervous system to maintain postural equilibrium. Sustained exposure to microgravity causes neurosensory adaptation during spaceflight, which results in decreased postural stability until readaptation occurs upon return to the terrestrial environment. Data which simulate sensory inputs under various conditions were collected in conjunction with JSC postural control studies using a Tilt-Translation Device (TTD). The University of West Florida proposed applying the Fuzzy C-Means Clustering (FCM) Algorithms to this data with a view towards identifying various states and stages. Data supplied by NASA/JSC were submitted to the FCM algorithms in an attempt to identify and characterize cluster substructure in a mixed ensemble of pre- and post-adaptational TTD data. Following several unsuccessful trials with FCM using a full 11 dimensional data set, a set of two channels (features) were found to enable FCM to separate pre- from post-adaptational TTD data. The main conclusions are that: (1) FCM seems able to separate pre- from post-TTD subject no. 2 on the one trial that was used, but only in certain subintervals of time; and (2) Channels 2 (right rear transducer force) and 8 (hip sway bar) contain better discrimination information than other supersets and combinations of the data that were tried so far.
Bezdek, James C.↗
The Advanced Solar Observatory
A conceptual plan for the development of a comprehensive long duration solar space observatory, The Advanced Solar Observatory (ASO) is described. The ASO is intended to provide solar astronomers with the observational power necessary to address fundamental problems relating to the solar convection zone and activity cycle; the thermal and nonthermal processes that control the transport of energy, mass, and magnetic flux in the solar atmosphere; the generation of the solar wind; and the dynamics of the inner heliosphere. The ASO concept encompasses three proposed Space Station-based instrument ensembles: (1) the High Resolution Telescope Cluster, which includes far ultraviolet, extreme ultraviolet, and X-ray telescopes; (2) the Pinhole/Occulter Facility, which includes Fourier transform and coded aperture hard X-ray and gamma ray telescopes and occulted ultraviolet and visible light coronagraphs; and (3) the High Energy Facility, which contains neutron, gamma ray, and low frequency radio spectrometers. Two other facilities, the Orbiting Solar Laboratory, and a package of Global Dynamics Instrumentation, will, with the Space Station ensembles, form a comprehensive capability for solar physics. The scientific program of the ASO, current instrument concepts for the Space Station based ASO instrument ensembles, and plans for their accommodation on the Space Station are described.
Walker, Arthur B. C., Jr.↗
Structural characterization of an intrinsically disordered protein complex using integrated small-angle neutron scattering and computing
Characterizing structural ensembles of intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) of proteins is essential for studying structure–function relationships. Due to the different neutron scattering lengths of hydrogen and deuterium, selective labeling and contrast matching in small-angle neutron scattering (SANS) becomes an effective tool to study dynamic structures of disordered systems. However, experimental timescales typically capture measurements averaged over multiple conformations, leaving complex SANS data for disentanglement. We hereby demonstrate an integrated method to elucidate the structural ensemble of a complex formed by two IDRs. We use data from both full contrast and contrast matching with residue-specific deuterium labeling SANS experiments, microsecond all-atom molecular dynamics (MD) simulations with four molecular mechanics force fields, and an autoencoder-based deep learning (DL) algorithm. From our combined approach, we show that selective deuteration provides additional information that helps characterize structural ensembles. We find that among the four force fields, a99SB-disp and CHARMM36m show the strongest agreement with SANS and NMR experiments. In addition, our DL algorithm not only complements conventional structural analysis methods but also successfully differentiates NMR and MD structures which are indistinguishable on the free energy surface. Finally, we present an ensemble that describes experimental SANS and NMR data better than MD ensembles generated by one single force field and reveal three clusters of distinct conformations. Our results demonstrate a new integrated approach for characterizing structural ensembles of IDPs.
59 BASIC BIOLOGICAL SCIENCES↗
Determination of bulk properties of tropical cloud clusters from large scale heat and moisture budgets, appendix B
The bulk properties of tropical cloud clusters, as the vertical mass flux, the excess temperature, and moisture and the liquid water content of the clouds, are determined from a combination of the observed large-scale heat and moisture budgets over an area covering the cloud cluster, and a model of a cumulus ensemble which exchanges mass, heat, vapor and liquid water with the environment through entrainment and detrainment. The method also provides an understanding of how the environmental air is heated and moistened by the cumulus convection. An estimate of the average cloud cluster properties and the heat and moisture balance of the environment, obtained from 1956 Marshall Islands data, is presented.
Yanai, M.↗
The Hydrological Cycle and Ocean Circulation of the Maritime Continent in the Mid-Pliocene: Results From PlioMIP2
The Maritime Continent (MC) forms the western boundary of the tropical Pacific Ocean, and relatively small changes in this region can impact the climate locally and remotely. In the mid-Piacenzian warm period of the Pliocene (mPWP; 3.264 to 3.025 Ma) atmospheric CO2 concentrations were ∼ 400 ppm, and the subaerial Sunda and Sahul shelves made the land–sea distribution of the MC different to today. Topographic changes and elevated levels of CO2, combined with other forcings, are therefore expected to have driven a substantial climate signal in the MC region at this time. By using the results from the Pliocene Model Intercomparison Project Phase 2 (PlioMIP2), we study the mean climatic features of the MC in the mPWP and changes in Indonesian Throughflow (ITF) with respect to the preindustrial. Results show a warmer and wetter mPWP climate of the MC and lower sea surface salinity in the surrounding ocean compared with the preindustrial. Furthermore, we quantify the volume transfer through the ITF; although the ITF may be expected to be hindered by the subaerial shelves, 10 out of 15 models show an increased volume transport compared with the preindustrial. In order to avoid undue influence from closely related models that are present in the PlioMIP2 ensemble, we introduce a new metric, the multi-cluster mean (MCM), which is based on cluster analysis of the individual models. We study the effect that the choice of MCM versus the more traditional analysis of multi-model mean (MMM) and individual models has on the discrepancy between model results and data. We find that models, which reproduce modern MC climate well, are not always good at simulating the mPWP climate anomaly of the MC. By comparing with individual models, the MMM and MCM reproduce the preindustrial sea surface temperature (SST) of the reanalysis better than most individual models and produce less discrepancy with reconstructed sea surface temperature anomalies (SSTA) than most individual models in the MC. In addition, the clusters reveal spatial signals that are not captured by the MMM, so that the MCM provides us with a new way to explore the results from model ensembles that include similar models.
Hydrological cycle↗