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Signal-to-noise assessment for diffusion tensor imaging with single data set and validation using a difference image method with data from a multicenter study

Purpose: To describe a quantitative method for determination of SNR that extracts the local noise level using a single diffusion data set. Methods: Brain data sets came from a multicenter study (eight sites; three MR vendors). Data acquisition protocol required b = 0, 700 s/mm{sup 2}, fov = 256 × 256 mm{sup 2}, acquisition matrix size 128 × 128, reconstruction matrix size 256 × 256; 30 gradient encoding directions and voxel size 2 × 2 × 2 mm{sup 3}. Regions-of-interest (ROI) were placed manually on the b = 0 image volume on transverse slices, and signal was recorded as the mean value of the ROI. The noise level from the ROI was evaluated using Fourier Transform based Butterworth high-pass filtering. Patients were divided into two groups, one for filter parameter optimization (N = 17) and one for validation (N = 10). Six white matter areas (the genu and splenium of corpus callosum, right and left centrum semiovale, right and left anterior corona radiata) were analyzed. The Bland–Altman method was used to compare the resulting SNR with that from the difference image method. The filter parameters were optimized for each brain area, and a set of “global” parameters was also obtained, which represent an average of all regions. Results: The Bland–Altman analysis on the validation group using “global” filter parameters revealed that the 95% limits of agreement of percent bias between the SNR obtained with the new and the reference methods were −15.5% (median of the lower limit, range [−24.1%, −8.9%]) and 14.5% (median of the higher limits, range [12.7%, 18.0%]) for the 6 brain areas. Conclusions: An FT-based high-pass filtering method can be used for local area SNR assessment using only one DTI data set. This method could be used to evaluate SNR for patient studies in a multicenter setting.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Wind and solar resource data sets

The range of resource data sets spans from static cartography showing the mean annual wind speed or solar irradiance across a region to high temporal and high spatial resolution products that provide detailed information at a potential wind or solar energy facility. These data sets are used to support continental-scale, national, or regional renewable energy development; facilitate prospecting by developers; and enable grid integration studies. This review first provides an introduction to the wind and solar resource data sets, then provides an overview of the common methods used for their creation and validation. A brief history of wind and solar resource data sets is then presented, followed by areas for future research.

14 SOLAR ENERGY↗

Constraints on models of the Higgs boson with exotic spin and parity using decays to bottom-antibottom quarks in the full CDF data set

In this study, a search for particles with the same mass and couplings as those of the standard model Higgs boson but different spin and parity quantum numbers is presented. We test two specific alternative Higgs boson hypotheses: a pseudoscalar Higgs boson with spin-parity J P = 0 – and a gravitonlike Higgs boson with J P = 2 + , assuming for both a mass of 125 GeV/c 2 . We search for these exotic states produced in association with a vector boson and decaying into a bottom-antibottom quark pair. The vector boson is reconstructed through its decay into an electron or muon pair, or an electron or muon and a neutrino, or it is inferred from an imbalance in total transverse momentum. We use expected kinematic differences between events containing exotic Higgs bosons and those containing standard model Higgs bosons. The data were collected by the CDF experiment at the Tevatron proton-antiproton collider, operating at a center-of-mass energy of √s = 1.96 TeV, and correspond to an integrated luminosity of 9.45 fb –1 . We exclude deviations from the predictions of the standard model with a Higgs boson of mass 125 GeV/c 2 at the level of 5 standard deviations, assuming signal strengths for exotic boson production equal to the prediction for the standard model Higgs boson, and set upper limits of approximately 30% relative to the standard model rate on the possible rate of production of each exotic state.

Aaltonen, Timo Antero↗

Morphological Characters Can Strongly Influence Early Animal Relationships Inferred from Phylogenomic Data Sets

There are considerable phylogenetic incongruencies between morphological and phylogenomic data for the deep evolution of animals. This has contributed to a heated debate over the earliest-branching lineage of the animal kingdom: the sister to all other Metazoa (SOM). Here, we use published phylogenomic data sets ($\sim $45,000–400,000 characters in size with $\sim $15–100 taxa) that focus on early metazoan phylogeny to evaluate the impact of incorporating morphological data sets ($\sim $15–275 characters). We additionally use small exemplar data sets to quantify how increased taxon sampling can help stabilize phylogenetic inferences. We apply a plethora of common methods, that is, likelihood models and their “equivalent” under parsimony: character weighting schemes. Our results are at odds with the typical view of phylogenomics, that is, that genomic-scale data sets will swamp out inferences from morphological data. Instead, weighting morphological data 2–10$\times $ in both likelihood and parsimony can in some cases “flip” which phylum is inferred to be the SOM. This typically results in the molecular hypothesis of Ctenophora as the SOM flipping to Porifera (or occasionally Placozoa). However, greater taxon sampling improves phylogenetic stability, with some of the larger molecular data sets ($>$200,000 characters and up to $\sim $100 taxa) showing node stability even with $\geqq100\times $ upweighting of morphological data. Accordingly, our analyses have three strong messages. 1) The assumption that genomic data will automatically “swamp out” morphological data is not always true for the SOM question. Morphological data have a strong influence in our analyses of combined data sets, even when outnumbered thousands of times by molecular data. Morphology therefore should not be counted out a priori. 2) We here quantify for the first time how the stability of the SOM node improves for several genomic data sets when the taxon sampling is increased. 3) The patterns of “flipping points” (i.e., the weighting of morphological data it takes to change the inferred SOM) carry information about the phylogenetic stability of matrices. The weighting space is an innovative way to assess comparability of data sets that could be developed into a new sensitivity analysis tool.

59 BASIC BIOLOGICAL SCIENCES↗

PLEXOS Inputs for Voisin et al. 2020 [Data set]

These data files provide MOSART-WM monthly flows at hydropower dam and HUC4 outlet locations. The flows are transformed into monthly generation constraints scenarios for hydro (generation potential) and thermal power plants (derated capacity) for input to the PLEXOS model. Contact: Sean Turner , Nathalie Voisin Authors: Nathalie Voisin, Ana Dyreson, Tao Fu, Matt O'Connell, Sean Turner, Tian Zhou, Jordan Macknick

13 HYDRO ENERGY↗

Results for Voisin et al. 2020 [Data set]

These data files provide contemporary (2010) bulk electricity grid operations and transmission flow as simulated by PLEXOS and informed by historical and future generation constraints scenarios as informed by historical and future water availability at hydro and thermoelectric plants. Contact: Ana Dyreson , Nathalie Voisin Authors: Nathalie Voisin, Ana Dyreson, Tao Fu, Matt O'Connell, Sean Turner, Tian Zhou, Jordan Macknick

13 HYDRO ENERGY↗

NOW-23: the 2023 National Offshore Wind Data Set

In this report, we present the latest wind resource data specifically tailored for offshore regions in the United States. The data set, known as the 2023 National Offshore Wind data set (NOW-23), has been developed by the National Renewable Energy Laboratory (NREL) and its partners, and surpasses the previous resource data set, the Wind Integration National Dataset (WIND) Toolkit, which was released approximately ten years ago, in its offshore component. The WIND Toolkit has been widely utilized by stakeholders involved in wind resource assessments across the continental United States. However, with significant advancements in numerical weather prediction modeling over the past decade, the NOW-23 data set incorporates the latest research and development progress to provide stakeholders with an updated and cutting-edge resource for offshore wind analysis. The NOW-23 data set is created using the Weather Research and Forecasting (WRF) model and its output is available, as for its predecessor, at 5-minute time resolution and 2-kilometer horizontal spatial resolution. However, the NOW-23 data set improves upon the WIND Toolkit through: 1. A modeling period of at least 20 years (and as long as 23 years in selected regions), starting in 2000 (compared to the 7-year 2007–2013 modeling period in the WIND Toolkit). 2. For several offshore regions, a region-specific sensitivity analysis, driven by an ensemble of WRF simulations, to assess the most adequate region-specific WRF setup. 3. An updated WRF model, from Version 3.4 used in the WIND Toolkit to Version 4.2.1 used for the NOW-23 data set, which incorporates significant research advancements. 4. The use of the state-of-the-art reanalysis product ERA5 (which supersedes the older ERA-Interim used in the WIND Toolkit) to provide atmospheric forcing at the WRF domain boundaries. Figure 1 shows the NOW-23 mean wind speed at 160 m above sea level (asl), which we use as proxy for hub-height of a commercial offshore wind turbine in this report across all regions.

17 WIND ENERGY↗