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All sourcesNASA NTRSDOE OSTI
DOE OSTI2013

AN IMPRINT OF MOLECULAR CLOUD MAGNETIZATION IN THE MORPHOLOGY OF THE DUST POLARIZED EMISSION

We describe a morphological imprint of magnetization found when considering the relative orientation of the magnetic field direction with respect to the density structures in simulated turbulent molecular clouds. This imprint was found using the Histogram of Relative Orientations (HRO), a new technique that utilizes the gradient to characterize the directionality of density and column density structures on multiple scales. We present results of the HRO analysis in three models of molecular clouds in which the initial magnetic field strength is varied, but an identical initial turbulent velocity field is introduced, which subsequently decays. The HRO analysis was applied to the simulated data cubes and mock-observations of the simulations produced by integrating the data cube along particular lines of sight. In the three-dimensional analysis we describe the relative orientation of the magnetic field B with respect to the density structures, showing that: (1) the magnetic field shows a preferential orientation parallel to most of the density structures in the three simulated cubes, (2) the relative orientation changes from parallel to perpendicular in regions with density over a critical density n{sub T} in the highest magnetization case, and (3) the change of relative orientation is largest for the highest magnetization and decreases in lower magnetization cases. This change in the relative orientation is also present in the projected maps. In conjunction with simulations, HROs can be used to establish a link between the observed morphology in polarization maps and the physics included in simulations of molecular clouds.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

Intergalactic medium emission observations with the cosmic web imager. II. Discovery of extended, kinematically linked emission around SSA22 Lyα BLOB 2

The intergalactic medium (IGM) is the dominant reservoir of baryons, delineates the large-scale structure of the universe at low to moderate overdensities, and provides gas from which galaxies form and evolve. Simulations of a cold-dark-matter- (CDM-) dominated universe predict that the IGM is distributed in a cosmic web of filaments and that galaxies should form along and at the intersections of these filaments. While observations of QSO absorption lines and the large-scale distribution of galaxies have confirmed the CDM paradigm, the cosmic web of IGM has never been confirmed by direct imaging. Here we report our observation of the Lyα blob 2 (LAB2) in SSA22 with the Cosmic Web Imager (CWI). This is an integral field spectrograph optimized for low surface brightness, extended emission. With 22 hr of total on- and off-source exposure, CWI has revealed that LAB2 has extended Lyα emission that is organized into azimuthal zones consistent with filaments. We perform numerous tests with simulations and the data to secure the robustness of this result, which relies on data with modest signal-to-noise ratios. We have developed a smoothing algorithm that permits visualization of data cube slices along image or spectral image planes. With both raw and smoothed data cubes we demonstrate that the filaments are kinematically associated with LAB2 and display double-peaked profiles characteristic of optically thick Lyα emission. The flux is 10-20 times brighter than expected for the average emission from the IGM but is consistent with boosted fluorescence from a buried QSO or gravitation cooling radiation. Using simple emission models, we infer a baryon mass in the filaments of at least 1-4 × 10{sup 11} M {sub ☉}, and the dark halo mass is at least 2 × 10{sup 12} M {sub ☉}. The spatial-kinematic morphology is more consistent with inflow from the cosmic web than outflow from LAB2, although an outflow feature maybe present at one azimuth. LAB2 and the surrounding gas have significant and coaligned angular momentum, strengthening the case for their association.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

SDSS-IV MaNGA: pyPipe3D Analysis Release for 10,000 Galaxies

We present here the analysis performed using the pyPipe3D pipeline for the final MaNGA data set included in the Sloan Digital Sky Survey data release 17. This data set comprises more than 10,000 individual data cubes, being the integral field spectroscopic (IFS) galaxy survey with the largest number of galaxies. pyPipe3D processes the IFS data cubes to extract spatially resolved spectroscopic properties of both the stellar population and the ionized gas emission lines. A brief summary of the properties of the sample and the characteristics of the analyzed data are included. The article provides details of: (i) the analysis performed; (ii) a description of the pipeline; (iii) the adopted stellar population library; (iv) the morphological and photometric analysis; (v) the adopted data model for the spatially resolved properties derived; and (vi) the individual integrated and characteristic galaxy properties included in the final catalog. Comparisons with the results from a previous version of the pipeline for earlier data releases and from other tools using this data set are included. A practical example of how to use the full data set and the final catalog illustrates how to handle the delivered product. Our full analysis can be accessed and downloaded from our web page.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

An iterative method to deblend AGN-Host contributions for Integral Field spectroscopic observations

ABSTRACT We present a new iterative deblending method to separate the host galaxy (HG) and their Active Galactic Nuclei (AGNs) emission with the use of Integral Field spectroscopic (IFS) data. The method decomposes the resolved HG emission from the unresolved AGN emission by modelling the two-dimensional surface brightness (SB) profile of the point-spread function (PSF) and the two-dimensional SB HG continuum simultaneously per each monochromatic slide. Our method does not require any prior information about the observed SB profile or a detailed fitting of the PSF, making it ideal for the automatic analysis of large galaxy samples. In this work, we test the quality of our method, its advantages, and its disadvantages. We test our method by using a set of IFS mock data cubes to quantify the reliability of our deblending process and further compare our method with the qdblend3d analysis tool. Furthermore, we applied our method to three data cubes selected from the MaNGA survey according to the dominance of either its HG or its AGN. We show that our deblending method is capable of disengaging the bright, non-resolved AGN emission from the HG continuum and its narrow emission lines. However, the decoupling depends on how well the IFS spatially resolves the PSF, and on the relative flux intensity of the HG-AGN. Therefore, the method is ideal for disentangling the bright-flux contribution from AGN-dominated spectra.

Ibarra-Medel, H. (ORCID:0000000297906313)↗
DOE OSTI2019

Characterizing and Improving the Data Reduction Pipeline for the Keck OSIRIS Integral Field Spectrograph

OSIRIS is a near-infrared (1.0–2.4 μm) integral field spectrograph operating behind the adaptive optics system at Keck Observatory and one of the first lenslet-based integral field spectrographs. Since its commissioning in 2005, it has been a productive instrument, producing nearly half the laser guide star adaptive optics papers on Keck. The complexity of its raw data format necessitated a custom data reduction pipeline (DRP) delivered with the instrument in order to iteratively assign flux in overlapping spectra to the proper spatial and spectral locations in a data cube. Other than bug fixes and updates required for hardware upgrades, the bulk of the DRP has not been updated since initial instrument commissioning. We report on the first major comprehensive characterization of the DRP using on-sky and calibration data. We also detail improvements to the DRP, including characterization of the flux assignment algorithm, exploration of spatial rippling in the reduced data cubes, and improvements to several calibration files, including the rectification matrix, bad-pixel mask, and wavelength solution. We present lessons learned from over a decade of OSIRIS data reduction that are relevant to the next generation of integral field spectrograph hardware and data reduction software design.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

NeuralCubes: Deep Representations for Visual Data Exploration

Visual exploration of large multi-dimensional datasets has seen tremendous progress in recent years, allowing users to express rich data queries that produce informative visual summaries, all in real time. Techniques based on data cubes are some of the most promising approaches. However, these techniques usually require a large memory footprint for large datasets. To tackle this problem, we present NeuralCubes: neural networks that predict results for aggregate queries, similar to data cubes. NeuralCubes learns a function that takes as input a given query, for instance, a geographic region and temporal interval, and outputs the result of the query. The learned function serves as a real-time, low-memory approximator for aggregation queries. Our models are small enough to be sent to the client side (e.g. the web browser for a web-based application) for evaluation, enabling data exploration of large datasets without database/network connection. Here, we demonstrate the effectiveness of NeuralCubes through extensive experiments on a variety of datasets and discuss how NeuralCubes opens up opportunities for new types of visualization and interaction.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2012

CONNECTING THE DOTS: ANALYZING SYNTHETIC OBSERVATIONS OF STAR-FORMING CLUMPS IN MOLECULAR CLOUDS

In this paper, we investigate the extent to which observations of molecular clouds can correctly identify and measure star-forming clumps. We produced a synthetic column density map and a synthetic spectral-line data cube from the simulated collapse of a 5000 M{sub Sun} molecular cloud. By correlating the clumps found in the simulation to those found in the synthetic observations, clump masses derived from spectral-line data cubes were found to be quite close to the true physical properties of the clumps. We also find that the 'observed' clump mass function (CMF) derived from the column density map is shifted by a factor of {approx}3 higher than the true CMF, due to projection of low-density material along the line of sight. Alves et al. first proposed that a shift of a CMF to higher masses by a factor of three can be attributed to a star formation efficiency of 30%. Our results indicate that this finding may instead be due to an overestimate of clump masses determined from column density observations.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

The molecular H{sub 2} emission and the stellar kinematics in the nuclear region of the Sombrero galaxy

We analyze the molecular H{sub 2} emission and the stellar kinematics in a data cube of the nuclear region of M104, the Sombrero galaxy, obtained with NIFS on the Gemini-north telescope. After a careful subtraction of the stellar continuum, the only emission line we detected in the data cube was H{sub 2}λ21218. An analysis of this emission revealed the existence of a rotating molecular torus/disk, aproximately co-planar with a dusty structure detected by us in a previous work. We interpret these two structures as being associated with the same obscuring torus/disk. The kinematic maps provided by the Penalized Pixel Fitting method revealed that the stellar kinematics in the nuclear region of M104 appears to be the result of the superposition of a “cold” rotating disk and a “hot” bulge. Using a model of a thin eccentric disk, we reproduced the main properties of the maps of the stellar radial velocity and of the stellar velocity dispersion, especially within a distance of 0′′.2 from the kinematic axis (in regions at larger distances, the limitations of a model of a thin rotating disk become more visible). The general behavior of the h{sub 3} map, which is significantly noisier than the other maps, was also reproduced by our model (although the discrepancies, in this case, are considerably higher). With our model, we obtained a mass of (9.0±2.0)×10{sup 8}M{sub ⊙} for the supermassive black hole of M104, which is compatible, at 1σ or 2σ levels, with the values obtained by previous studies.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

CORONAL MAGNETOGRAPHY OF A SIMULATED SOLAR ACTIVE REGION FROM MICROWAVE IMAGING SPECTROPOLARIMETRY

We have simulated the Expanded Owens Valley Solar Array (EOVSA) radio images generated at multiple frequencies from a model solar active region, embedded in a realistic solar disk model, and explored the resulting data cube for different spectral analysis schemes to evaluate the potential for realizing one of EOVSA’s most important scientific goals—coronal magnetography. In this paper, we focus on modeling the gyroresonance and free–free emission from an on-disk solar active region model with realistic complexities in electron density, temperature and magnetic field distribution. We compare the magnetic field parameters extrapolated from the image data cube along each line of sight after folding through the EOVSA instrumental profile with the original (unfolded) parameters used in the model. We find that even the most easily automated, image-based analysis approach (Level-0) provides reasonable quantitative results, although they are affected by systematic effects due to finite sampling in the Fourier (UV) plane. Finally, we note the potential for errors due to misidentified harmonics of the gyrofrequency, and discuss the prospects for applying a more sophisticated spectrally based analysis scheme (Level-1) to resolve the issue in cases where improved UV coverage and spatial resolution are available.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

Extended carbon line emission in the galaxy: Searching for dark molecular gas along the G328 sightline

We present spectral data cubes of the [CI] 809 GHz, {sup 12}CO 115 GHz, {sup 13}CO 110 GHz, and HI 1.4 GHz line emission from a ∼1 square degree region along the l=328{sup ∘} (G328) sightline in the Galactic Plane. Emission arises principally from gas in three spiral arm crossings along the sightline. The distribution of emission in the CO and [CI] lines is found to be similar, with the [CI] slightly more extended, and both are enveloped in extensive HI. Spectral line ratios per voxel in the data cubes are found to be similar across the entire extent of the Galaxy. However, toward the edges of the molecular clouds the [CI]/{sup 13}CO and {sup 12}CO/{sup 13}CO line ratios rise by ∼50%, and the [CI]/HI ratio falls by ∼10%. We attribute this to these sightlines passing predominantly through the surfaces of photodissociation regions (PDRs), where the carbon is found mainly as C or C{sup +}, while the H{sub 2} is mostly molecular, and the proportion of atomic gas also increases. We undertake modeling of the PDR emission from low density molecular clouds excited by average interstellar radiation fields and cosmic-ray ionization to quantify this comparison, finding that depletion of sulfur and reduced PAH abundance is needed to match line fluxes and ratios. Roughly one-third of the molecular gas along the sightline is found to be associated with this surface region, where the carbon is largely not to be found in CO. Approximately 10% of the atomic hydrogen along the sightline is cold gas within PDRs.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

A Workflow for Accelerating Multimodal Data Collection for Electrodeposited Films

Abstract Future machine learning strategies for materials process optimization will likely replace human capital-intensive artisan research with autonomous and/or accelerated approaches. Such automation enables accelerated multimodal characterization that simultaneously minimizes human errors, lowers costs, enhances statistical sampling, and allows scientists to allocate their time to critical thinking instead of repetitive manual tasks. Previous acceleration efforts to synthesize and evaluate materials have often employed elaborate robotic self-driving laboratories or used specialized strategies that are difficult to generalize. Herein we describe an implemented workflow for accelerating the multimodal characterization of a combinatorial set of 915 electroplated Ni and Ni–Fe thin films resulting in a data cube with over 160,000 individual data files. Our acceleration strategies do not require manufacturing-scale resources and are thus amenable to typical materials research facilities in academic, government, or commercial laboratories. The workflow demonstrated the acceleration of six characterization modalities: optical microscopy, laser profilometry, X-ray diffraction, X-ray fluorescence, nanoindentation, and tribological (friction and wear) testing, each with speedup factors ranging from 13–46x. In addition, automated data upload to a repository using FAIR data principles was accelerated by 64x.

36 MATERIALS SCIENCE↗
DOE OSTI2015

A 24 μm point source catalog of the galactic plane from Spitzer/MIPSGAL

In this contribution, we describe the applied methods to construct a 24 μm based point source catalog derived from the image data of the MIPSGAL 24 μm Galactic Plane Survey and the corresponding data products. The high quality catalog product contains 933,818 sources, with a total of 1,353,228 in the full archive catalog. The source tables include positional and photometric information derived from the 24 μm images, source quality and confusion flags, and counterpart photometry from matched 2MASS, GLIMPSE, and WISE point sources. Completeness decay data cubes are constructed at 1′ angular resolution that describe the varying background levels over the MIPSGAL field and the ability to extract sources of a given magnitude from this background. The completeness decay cubes are included in the set of data products. We present the results of our efforts to verify the astrometric and photometric calibration of the catalog, and present several analyses of minor anomalies in these measurements to justify adopted mitigation strategies.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

SDSS-IV MaNGA: Modeling the Spectral Line-spread Function to Subpercent Accuracy

The Sloan Digital Sky Survey IV Mapping Nearby Galaxies at APO (MaNGA) program has been operating from 2014 to 2020, and has now observed a sample of 9269 galaxies in the low redshift universe (z ∼ 0.05) with integral-field spectroscopy. With rest-optical (λλ0.36–1.0 μm) spectral resolution R ∼ 2000 the instrumental spectral line-spread function (LSF) typically has 1σ width of about 70 km s{sup −1}, which poses a challenge for the study of the typically 20–30 km s{sup −1} velocity dispersion of the ionized gas in present-day disk galaxies. In this contribution, we present a major revision of the MaNGA data pipeline architecture, focusing particularly on a variety of factors impacting the effective LSF (e.g., under-sampling, spectral rectification, and data cube construction). Through comparison with external assessments of the MaNGA data provided by substantially higher-resolution R ∼ 10,000 instruments, we demonstrate that the revised MPL-10 pipeline measures the instrumental LSF sufficiently accurately (≤0.6% systematic, 2% random around the wavelength of Hα) that it enables reliable measurements of astrophysical velocity dispersions σ {sub Hα} ∼ 20 km s{sup −1} for spaxels with emission lines detected at signal-to-noise ratio > 50. Velocity dispersions derived from [O II], Hβ, [O III], [N II], and [S II] are consistent with those derived from Hα to within about 2% at σ {sub Hα} > 30 km s{sup −1}. Although the impact of these changes to the estimated LSF will be minimal at velocity dispersions greater than about 100 km s{sup −1}, scientific results from previous data releases that are based on dispersions far below the instrumental resolution should be reevaluated.

47 OTHER INSTRUMENTATION↗
DOE OSTI2015

Compressed Streak Imaging Beam Diagnostic

We are planning a new beam diagnostic based on Compressed Ultrafast Photography (CUP)1.A foil inserted in the beam path is used to generate a continuous optical image of the beam, which is the same technique used on the existing DARHT II beam imaging diagnostic. This existing diagnostic compresses the beam image with anamorphic lenses into four views that are streaked simultaneously on two streak cameras. In our new beam diagnostic design the anamorphic lenses are replaced with regular lenses and the beam image is stamped with a pseudo-random mask pattern. The full image is imaged onto a streak camera with its entrance slit expanded. Modifying the CUP technique, which uses a single streaked image, our design splits the image into four rotated copies and puts all four images on two streak cameras. A data cube of multiple image frames is reconstructed from the streak camera data through the use of the TwiST algorithm2 combined with total variation denoising3. The additional rotated images improve spatial resolution and reduce noise and image artifacts compared to using a single streaked image. In reconstructions of simulated data, fine detail in the beam profile can be seen and there is a remarkable absence of image artifacts compared to the existing DARHT II beam imaging diagnostic. Performance was evaluated using a pseudo-MTF derived from a simulated wave pattern test object.

Marks, Daniel G.↗
DOE OSTI2015

THE DATA REDUCTION PIPELINE FOR THE APACHE POINT OBSERVATORY GALACTIC EVOLUTION EXPERIMENT

The Apache Point Observatory Galactic Evolution Experiment (APOGEE), part of the Sloan Digital Sky Survey III, explores the stellar populations of the Milky Way using the Sloan 2.5-m telescope linked to a high resolution (R ∼ 22,500), near-infrared (1.51–1.70 μm) spectrograph with 300 optical fibers. For over 150,000 predominantly red giant branch stars that APOGEE targeted across the Galactic bulge, disks and halo, the collected high signal-to-noise ratio (>100 per half-resolution element) spectra provide accurate (∼0.1 km s{sup −1}) RVs, stellar atmospheric parameters, and precise (≲0.1 dex) chemical abundances for about 15 chemical species. Here we describe the basic APOGEE data reduction software that reduces multiple 3D raw data cubes into calibrated, well-sampled, combined 1D spectra, as implemented for the SDSS-III/APOGEE data releases (DR10, DR11 and DR12). The processing of the near-IR spectral data of APOGEE presents some challenges for reduction, including automated sky subtraction and telluric correction over a 3°-diameter field and the combination of spectrally dithered spectra. We also discuss areas for future improvement.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

The Catalogue for Astrophysical Turbulence Simulations (CATS)

Turbulence is a key process in many fields of astrophysics. Advances in numerical simulations of fluids over the last several decades have revolutionized our understanding of turbulence and related processes such as star formation and cosmic ray propagation. However, data from numerical simulations of astrophysical turbulence are often not made public. We introduce a new simulation-oriented database for the astronomical community: the Catalogue for Astrophysical Turbulence Simulations (CATS), located at www.mhdturbulence.com. CATS includes magnetohydrodynamic (MHD) turbulent box simulation data products generated by the public codes athena++, arepo, enzo, and flash. CATS also includes several synthetic observational data sets, such as turbulent HI data cubes. We also include measured power spectra and three-point correlation functions from some of these data. We discuss the importance of open-source statistical and visualization tools for the analysis of turbulence simulations such as those found in CATS.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2017

Accurate Recovery of H i Velocity Dispersion from Radio Interferometers

Gas velocity dispersion measures the amount of disordered motion of a rotating disk. Accurate estimates of this parameter are of the utmost importance because the parameter is directly linked to disk stability and star formation. A global measure of the gas velocity dispersion can be inferred from the width of the atomic hydrogen (H i) 21 cm line. We explore how several systematic effects involved in the production of H i cubes affect the estimate of H i velocity dispersion. We do so by comparing the H i velocity dispersion derived from different types of data cubes provided by The H i Nearby Galaxy Survey. We find that residual-scaled cubes best recover the H i velocity dispersion, independent of the weighting scheme used and for a large range of signal-to-noise ratio. For H i observations, where the dirty beam is substantially different from a Gaussian, the velocity dispersion values are overestimated unless the cubes are cleaned close to (e.g., ∼1.5 times) the noise level.

79 ASTRONOMY AND ASTROPHYSICS↗