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At least 37 records · Page 2

Cyclization of nucleotide analogues as an obstacle to polymerization

Cyclization of activated nucleotide analogues by intramolecular phosphodiester-bond formation is likely to compete very effectively with template-directed condensation except in the cases of ribo- and arabinonucleotides. This could have excluded derivatives of most sugars from growing polyribonucleotide chains and thus reduced chain-termination in prebiotic polynucleotide synthesis.

NASA Discipline Exobiology↗

The mechanism of carboxylative cyclization of propargylamine by N-heterocyclic carbene complexes of Au(I)

Here, the complex [Au(IPr)(2-oxazolidinone)] (1 = IKa) was prepared from reaction of [Au(IPr)Cl] (2), K 2 CO 3 , and propargyl amine (PPA). Kinetic studies have been performed for acid cleavage of 1 to yield the oxazolidinone product and an [Au(IPr)(X)] adduct. The fastest rates of cleavage were found to occur for the hydrogen chloride salt of PPA (PPA-HCl) and for the CO 2 adduct of PPA, PPA-CO 2 = the carbamic acid (CA). This transformation was studied as a function of [CA], pressure of CO 2 as well as temperature. Detailed computational studies support the formation of a key intermediate and are also in agreement with a rapid carbonylation/decarbonylation reaction. The computed reactions mechanisms for addition of PPA-HCl and CA are also presented as well as the crystal structure of 1.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Oxidative Cascade Cyclization of 1,2-Dicyanoarenes by a Dicopper(I,I) Nitrite Complex to Phthalimide Ligands

The reactions of [Cu2(μ–κ 1:κ 1 -O2N)­DPFN]­[NTf2] (1; DPFN = 2,7-bis­(fluoro-di­(2-pyridyl)­methyl)-1,8-naphthyridine, NTf2 – = N­(SO2CF3)2 –) with 1,4-dicyanobenzene and 1,2-dicyanoarenes are discussed. Treatment of 1 with 1,4-dicyanobenzene produces a tetra-Cu­(I) terephthalate complex (2) and dinitrogen via a discrete CN triple bond cleavage at each cyano group. However, reactions of 1 with 1,2-dicyanoarenes appear to proceed via a cascade reaction involving two intertwined CN triple bond activations to yield a series of di-Cu­(I) phthalimides, [Cu2(μ–N­(CO)2(Ar))­DPFN]­[NTf2] (3-(Ar); Ar = 1,2-arylenes C6H4, 3-NO2C6H3, 4-NO2C6H3, 4-PrOC6H3, 3-NC5H3) and dinitrogen. The dicopper phthalimide bonding interaction in these compounds is robust enough to resist protonation by pentafluorophenol and alkylation by methyl triflate or benzyl chloride at the imide nitrogen. This characteristic presents an opportunity for postsynthetic modifications of the phthalimide ligand. Nevertheless, treatment of 3-(C 6 H 4 ) with bistriflimidic acid (HNTf2) results in release of the neutral phthalimide, making the dicopper core available to coordinate other ligands such as nitrite and thus, completing a stoichiometric cycle.

Fernandez, Jose Martinez↗

Stereodivergent photobiocatalytic radical cyclization through the repurposing and directed evolution of fatty acid photodecarboxylases

Despite their intriguing photophysical and photochemical activities, naturally occurring photoenzymes have not yet been repurposed for new-to-nature activities. Here we engineered fatty acid photodecarboxylases (FAPs) to catalyse unnatural photoredox radical C–C bond formation by leveraging strongly oxidizing excited-state flavoquinone cofactor. Through genome mining, rational engineering and directed evolution, we developed a panel of radical photocyclases (RAPs) to facilitate decarboxylative radical cyclisation with excellent chemo-, enantio-, and diastereoselectivities. Our high-throughput experimental workflow allowed for the directed evolution of FAPs. An orthogonal set of RAPs was engineered to access all four possible stereoisomers of stereochemical dyad, affording fully diastereo- and enantiodivergent biotransformations in asymmetric radical biocatalysis. Molecular dynamics simulations show that our evolved RAPs allow near-attack conformations to be easily accessed, enabling chemoselective radical cyclisation. The development of stereoselective RAPs provides unnatural C–C bond forming activities in natural photoenzyme families, which can be used to tame the stereochemistry of free radical-mediated reactions.

Ju, Shuyun (ORCID:000000020322104X)↗