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At least 37 records · Page 2

Investigating nuclei produced in 9 Li + 11 B reaction

In this contribution, a preliminary analysis of the first part of the experiment S2012 conducted at the ISAC-II facility of Canada’s particle accelerator center TRIUMF in Vancouver will be presented. The experiment aims to study highly clustered structures of nuclei created in multi-nucleon transfer reactions of 9 Li radioactive beam on natural boron target ( 11 B and 10 B). The main objective of the experiment is to study exotic structures created in neutron-rich 16 C nucleus in the range of higher excitation energies. The analysis presented here probes the existence of exotic cluster configurations and the quality of detected results using the invariant mass techniques.

74 ATOMIC AND MOLECULAR PHYSICS↗

sOPTICS: a modified density-based algorithm for identifying galaxy groups/clusters and brightest cluster galaxies

A direct approach to studying the galaxy–halo connection is to analyse groups and clusters of galaxies that trace the underlying dark matter haloes, emphasizing the importance of identifying galaxy clusters and their associated brightest cluster galaxies (BCGs). In this work, we test and propose a robust density-based clustering algorithm that outperforms the traditional Friends-of-Friends (FoF) algorithm in the currently available galaxy group/cluster catalogues. Our new approach is a modified version of the Ordering Points To Identify the Clustering Structure (OPTICS) algorithm, which accounts for line-of-sight positional uncertainties due to redshift space distortions by incorporating a scaling factor, and is thereby referred to as sOPTICS. When tested on both a galaxy group catalogue based on semi-analytic galaxy formation simulations and observational data, our algorithm demonstrated robustness to outliers and relative insensitivity to hyperparameter choices. In total, we compared the results of eight clustering algorithms. The proposed density-based clustering method, sOPTICS, outperforms FoF in accurately identifying giant galaxy clusters and their associated BCGs in various environments with higher purity and recovery rate, also successfully recovering 115 BCGs out of 118 reliable BCGs from a large galaxy sample. Furthermore, when applied to an independent observational catalogue without extensive re-tuning, sOPTICS maintains high recovery efficiency, confirming its flexibility and effectiveness for large-scale astronomical surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

6Li as a three-body system in the (p, 3He) reaction at astrophysical energies

Several astrophysical processes are governed by the occurrence of nuclear reactions involving light nuclei at energies below the Coulomb barrier. Among other effects, their understanding is challenged by the appearance of clustered structures in the ground-state configuration of some of these nuclei, which may have a significant impact on the reaction cross section. In this contribution, we focus on the Li 6 (p, He 3 ) He 4 reaction, to probe the role of clustered configurations of Li 6 . In particular, we consider a three-body ab-initio calculation, based on the hyperspherical harmonics (HH) method, of the Li 6 wave function (WF), together with a more phenomenological three-body model. We observe that the HH WF entails a degree of clustering much larger than obtained from the phenomenological WFs. However, the corresponding reaction cross section, evaluated as a direct two-nucleon transfer in distorted-wave Born approximation, still follows the scaling with the clustering strength already pointed out in a previous work [1] and exhibits an energy trend very similar to that obtained with realistic phenomenological WFs. This opens up interesting perspectives towards constraining

Perrotta, S.↗

A sorghum pangenome reference improves global crop trait discovery

Although the green revolution adapted a handful of crops to homogeneous and high-input industrialized agriculture, much of the global population still relies on the local production of variable crop cultivars by low-input smallholder farms. This diversity of unhomogenized crops, like that of the grain and bioenergy crop sorghum, offers raw materials for genetic gain and cultivar improvement. However, breeding efforts can be constrained by highly specialized traits and breeding targets Here, to bridge this diversity, we constructed a 33-member pangenome reference and a diversity panel across 1,984 cultivars and landraces. We leveraged these resources to explore the complex interplay among historical contingency, ongoing adaptation and previously uncharacterized structural diversity. Specifically, our analyses conclusively demonstrated multiple nested and deeply diverged structural variants in the domestication gene SHATTERING1, which distinguish the previously established multicentric origin of sorghum. We then applied landscape genomics to reveal how gene flow and secondary contact created the complex genetic mosaic in contemporary breeding networks. As proof of concept for pangenome-accelerated trait discovery, we connected biosynthetic gene cluster structural variation to phenotypic leaf concentration of the cyanogenic glucoside dhurrin. Combined, these approaches will accelerate breeding and trait discovery and provide a framework for similar applications in other crops.

agricultural genetics↗

Direct observation of the superallowed α-decay of 104 Te

The radioactivity of the α particle is among the most compelling evidence for the existence of cluster structures in atomic nuclei. During the decay process, a pre-existing α particle tunnels through the potential barrier formed by the residual nucleus1,2. The degree of preformation of the α particle, a strongly bound system of two protons and two neutrons, is extracted from the data by dividing the α-decay probability by the barrier penetrability for a given particle energy. The preformation probability changes rapidly near nuclear shell closures, which is direct evidence that clustering is connected to nuclear structure3. Enhanced preformation was observed in the lightest α-particle emitters, spherical tellurium and xenon isotopes decaying to magic isotopes of tin. Here we show the most extreme case of α-particle preformation from the measurement of the decay of tellurium-104 (104Te). With a half-life of , 104Te is the fastest ground-state α-emitting nucleus known so far. The deduced preformation demonstrates that the enhancement is greater for 104Te than for any other nucleus. One nuclear model that can explain our observation postulates that the α particle can exist only in the low-nuclear-matter-density regions on the surface of the nucleus. The uniquely high preformation for 104Te is attributed to its relation to doubly magic tin-100 (100Sn), creating conditions conducive to form an α particle.

Cox, Ian↗

Nuclear Theory from First Principles to Forefront Experiments (Final Report for DE-SC0018638)

The Lee research group is a part of the Nuclear Lattice Effective Field Theory Collaboration, which has developed and performed ab initio lattice simulations of nuclear structure, scattering, reactions, and many-body systems. The other senior members of the collaboration include Ulf-G. Meißner at Bonn/Julich, Evgeny Epelbaum and Hermann Krebs at Bochum, Timo Lahde and Thomas Luu at Julich, and Gautam Rupak at Mississippi State. Our letter “Ab initio alpha-alpha scattering” was featured in a Nature News and Views article. Another letter “Nuclear binding near a quantum phase transition” was highlighted in a Viewpoint article in the online APS journal Physics as well as a news article in the IOP publication Physics World (September 21, 2016). Our letter “Eigenvector continuation with subspace learning” was also highlighted a Synopsis article in Physics. There are many promising ab initio approaches being used to calculate the properties of few-and many-nucleon systems. This includes the no-core shell model, symmetry-adapted no-core shell model quantum Monte Carlo, auxiliary-field diffusion Monte Carlo, self-consistent Green’s functions, many-body perturbation theory, in-medium similarity renormalization group, and coupled cluster methods. Lattice effective field theory is another ab initio approach which combines the framework of effective field theory with lattice Monte Carlo methods to allow favorable scaling from few- to many-body systems. Perhaps the most important aspect of lattice effective field theory is that its strengths and weaknesses are orthogonal to that of other ab initio methods. For example, lattice effective field theory has little difficulty in probing cluster structures and collectivity, while such features are much more difficult using other methods. Furthermore it can be used to compute superfluid condensate fractions as well as the phase diagram of strongly matter and the density and temperature dependence of clustering. Lattice effective field theory was first used in simulations of infinite nuclear matter and infinite neutron matter with pions and without pions. In addition to the efforts by our collaboration, there have been recent efforts by other groups as well.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Invariant-mass spectroscopy of 10 B, 11 C, 14 F, 16 F, and 18 Na

The invariant-mass method is used to study the structure of a number of light proton-rich isotopes utilizing fast beams. Reactions where the projectile picks up a proton have been used to study d-wave resonances in 14 F, 16 F, and 18 Na. While the 16 F and 18 Na results are consistent with previous studies, the 14 F results are not consistent with the only previous work. Here, we have tentatively identified the 4 + member of a rotational band in 10 B, which is the analog of well-known states with strong α-cluster structure in 10 Be and 10 C. Finally, spin and parities of newly observed states in 11 C which decay sequentially into three-body exit channels have been determined or restricted.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

𝑅-matrix analysis of 22 Ne states populated in 18 O ⁡(𝛼,𝛼) resonant elastic scattering

The properties of resonances in the 18 O + 𝛼 interaction are important for analyses of astrophysical processes and for understanding of the development of the 𝛼-cluster structure with addition of neutrons to 4N nuclei. Previous high-energy resolution measurements have not been treated using the contemporary 𝑅-matrix approach. We have performed an 𝑅-matrix analysis of the resonant data [D. Powers, J. K. Bair, J. L. C. Ford, Jr., and H. B. Willard, Phys. Rev. 134, B1237 (1964)] and obtained new data on 15 levels in the excitation region of 11.7–12.5 MeV 22 Ne. It appears that the model calculations did not predict the observed tendency in the 20–22 Ne 𝛼 clustering. This paper is the first step of our program of investigation of the 22 Ne spectrum in resonant reactions.

6 ≤ A ≤ 19↗

Determination of Molecular Structure and Dynamics of Molten Salts by Advanced Neutron and X-ray Scattering Measurements and Computer Modeling

The design and development of fully functional Molten-Salt Reactors (MSR) require detailed knowledge of the molten salt properties in order to understand and predict the salt’s behavior. Fundamental properties of interest include molecular structure, speciation, and dynamics (such as diffusion coefficients) of salt components and dissolved corrosion and fission products. Computer modeling is necessary to predict changes in physical and chemical properties due to irradiation, burning of dissolved fuel, and corrosion. The modeling requires experimental data, and advanced neutron and x-ray scattering and spectroscopy provide the most reliable and direct determination of the structure (Pair-Distribution Functions, PDF), and dynamics of ions in the melt. This project dealt with both fluoride and chloride salts. The PDFs have been measured by a combination of neutron and x-ray diffraction. We utilized the techniques of isotope substitutions, a very powerful tool available for neutron-scattering, to extract the details of the liquid structure. Although similar measurements have been done before, modern advanced neutron and x-ray-scattering techniques allow collecting the data at much higher resolution and in a wider range of temperatures. Importantly, we were among the first to study fluoride salts by neutron scattering. The importance of impurities and their effects on salt properties have become apparent recently and so new methods of salt purification were developed. We took advantage of these developments to produce reliable data, which have been used for computer simulations of both clean salts and those with added fission and corrosion products most relevant for MSRs. Ab initio molecular dynamics simulations have been performed to understand the multi-component liquid solution, in particular solubility of impurities and thermodynamic interactions in relation to the ionic-cluster structure of the fluid. We applied machine learning to regress from the simulation and experimental data in order to develop a fast-acting model that can handle molten salt with an arbitrary (≥ 10) number of chemical elements and be able to predict chemical potential as a function of composition and temperature. This project resulted in a number of experimental and computer-simulation publications, a patent application, and numerous conference presentations (American Physical Society, American Chemical Society, and The Electrochemical Society among others). Multiple students and postdocs participated and collaborated on aspects of this project. This project seeded new collaborations between MIT and other institutions, such as the University of Massachusetts Lowell, the University of Illinois Urbana-Champaign, the University of California Berkeley, and Oak Ridge and Los Alamos National Labs. As such, this project has had a broad and lasting impact beyond its original scientific scope.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Quantum physics of stars

Stars are slowly developing objects; the lifetimes of the different burning phases are determined by the strength of nuclear reactions, which in turn are defined by the quantum structure of the associated nuclei at the threshold and the respective reaction mechanisms. Stars, from the nuclear physics perspective, are cold environments where only a few of the key nuclear reactions have been measured at the actual stellar plasma temperatures. This is also the case for more dynamic astrophysical phenomena from the big bang to stellar explosions. Most of the nuclear reaction rates are therefore based on theoretical extrapolations. A number of discrepancies between these predictions and the associated stellar signatures have been observed, and many may be due to low-energy or near-threshold quantum effects. These effects need to be understood in order to reliably model nuclear reaction processes, not only for stars but also for low-temperature plasma environments such as controlled magnetic or inertial confinement fusion systems, which operate in similar temperature regimes. This review summarizes the various theoretical techniques presently used for deriving reaction rates and discusses possible quantum effects that may impact the reaction cross section near the reaction threshold. These resemble enhanced single-particle and cluster structures near threshold and associated interference effects. New experimental techniques such as deep-underground accelerators or the study of transfer reactions to mimic the quantum-mechanical transition strength, the so-called Trojan horse method, provide ways to directly or indirectly probe the reaction features that determine the reaction rates at stellar energies. Furthermore, this is demonstrated on a number of key nuclear reactions for different nucleosynthesis environments. Finally, current inconsistencies between experimental predictions and observations are discussed.

Models & methods for nuclear reactions↗

Role of Aberrant Spontaneous Neurotransmission in SNAP25-Associated Encephalopathies

SNARE (soluble N-ethylmaleimide sensitive factor attachment protein receptor) complex, composed of synaptobrevin, syntaxin, and SNAP25, forms the essential fusion machinery for neurotransmitter release. Recent studies have reported several mutations in the gene encoding SNAP25 as a causative factor for developmental and epileptic encephalopathies of infancy and childhood with diverse clinical manifestations. However, it remains unclear how SNAP25 mutations give rise to these disorders. In this work, we show that although structurally clustered mutations in SNAP25 give rise to related synaptic transmission phenotypes, specific alterations in spontaneous neurotransmitter release are a key factor to account for disease heterogeneity. Importantly, we identified a single mutation that augments spontaneous release without altering evoked release, suggesting that aberrant spontaneous release is sufficient to cause disease in humans.

60 APPLIED LIFE SCIENCES↗

Exploration of Tertiary Structure in Sequence-Defined Polymers Using Molecular Dynamics Simulations

Peptoids are a class of sequence-defined biomimetic polymers with peptide-like backbones and side chains located on backbone nitrogens rather than alpha carbons. These materials demonstrate a strong ability for precise control of single-chain structure, multiunit self-assembly, and macromolecular assembly through careful tuning of sequence due to the diversity of available side chains, although the driving forces behind these assemblies are often not understood. Prior experimental work has shown that linked 15mer peptoids can mimic the protein helical hairpin structure by leveraging the chirality-inducing nature of bulky side chains and hydrophobicity, but there are still gaps in our understanding of the relationship between sequence, stability, and particular secondary or tertiary structure. Here, we present a molecular dynamics (MD) study on the folding behavior of these polymers into hairpins, discussing the differences in structure from sequences with various characteristics in water and acetonitrile, and then compare the handedness preference of common helical motifs between solvents.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Folding Coarse-Grained Oligomer Models with PyRosetta

Non-biological foldamers are a promising class of macromolecules that share similarities to classical biopolymers such as proteins and nucleic acids. Currently, designing novel foldamers is a non-trivial process, often involving many iterations of trial synthesis and characterization until folded structures are observed. In this work, we aim to tackle these foldamer design challenges using computational modeling techniques. We developed CG PyRosetta, an extension to the popular protein folding python package, PyRosetta, which introduces coarse-grained (CG) residues into PyRosetta, enabling the folding of toy CG foldamer models. Although these models are simplified, they can help explore overarching physical hypotheses about how oligomers can form. Through systematic variation of CG parameters in these models, we can investigate various folding hypotheses at the CG scale to inform the design process of new foldamer chemistries. In this study, we demonstrate CG PyRosetta’s ability to identify minimum energy structures with a diverse structural search over a range of simple models, as well as two hypothesis-driven parameter scans investigating the effects of side-chain size and internal backbone angle on secondary structures. We are able to identify several types of secondary structures from single- and double-helices to sheet-like and knot-like structures. Here, we show how side-chain size and backbone bond angle both play an important role in the structure and energetics of these toy models. Optimal side-chain sizes promote favorable packing of side chains, while specific backbone bond angles influence the specific helix type found in folded structures.

36 MATERIALS SCIENCE↗

The 𝑚=2 amplituhedron and the hypersimplex: Signs, clusters, tilings, Eulerian numbers

The hypersimplex Δ <#comment/> k + 1 , n \Delta _{k+1,n} is the image of the positive Grassmannian G r k + 1 , n ≥ <#comment/> 0 Gr^{\geq 0}_{k+1,n} under the moment map. It is a polytope of dimension n − <#comment/> 1 n-1 in R n \mathbb {R}^n . Meanwhile, the amplituhedron A n , k , 2 ( Z ) \mathcal {A}_{n,k,2}(Z) is the projection of the positive Grassmannian G r k , n ≥ <#comment/> 0 Gr^{\geq 0}_{k,n} into the Grassmannian G r k , k + 2 Gr_{k,k+2} under a map Z ~ <#comment/> \tilde {Z} induced by a positive matrix Z ∈ <#comment/> M a t n , k + 2 > 0 Z\in Mat_{n,k+2}^{>0} . Introduced in the context of scattering amplitudes , it is not a polytope, and has full dimension 2 k 2k inside G r k , k + 2 Gr_{k,k+2} . Nevertheless, there seem to be remarkable connections between these two objects via T-duality , as conjectured by Łukowski, Parisi, and Williams [Int. Math. Res. Not. (2023)]. In this paper we use ideas from oriented matroid theory, total positivity, and the geometry of the hypersimplex and positroid polytopes to obtain a deeper understanding of the amplituhedron. We show that the inequalities cutting out positroid polytopes —images of positroid cells of G r k + 1 , n ≥ <#comment/> 0 Gr^{\geq 0}_{k+1,n} under the moment map—translate into sign conditions characterizing the T-dual Grasstopes —images of positroid cells of G r k , n ≥ <#comment/> 0 Gr^{\geq 0}_{k,n} under Z ~ <#comment/> \tilde {Z} . Moreover, we subdivide the amplituhedron into chambers , just as the hypersimplex can be subdivided into simplices, with both chambers and simplices enumerated by the Eulerian numbers. We use these properties to prove the main conjecture of Łukowski, Parisi, and Williams [Int. Math. Res. Not. (2023)]: a collection of positroid polytopes is a tiling of the hypersimplex if and only if the collection of T-dual Grasstopes is a tiling of the amplituhedron A n , k , 2 ( Z ) \mathcal {A}_{n,k,2}(Z) for all Z Z . Moreover, we prove Arkani-Hamed–Thomas–Trnka’s conjectural sign-flip characterization of A n , k , 2 \mathcal {A}_{n,k,2} , and Łukowski–Parisi–Spradlin–Volovich’s conjectures on m = 2 m=2 cluster adjacency and on positroid tiles for A n , k , 2 \mathcal {A}_{n,k,2} (images of 2 k 2k -dimensional positroid cells which map injectively into A n , k , 2 \mathcal {A}_{n,k,2} ). Finally, we introduce new cluster structures in the amplituhedron.

Parisi, Matteo↗

First Measurement of the EMC effect in 10 B and 11 B

The nuclear dependence of the inclusive inelastic electron scattering cross section (the EMC effect) has been measured for the first time in 10 B and 11 B. Previous measurements of the EMC effect in A ≤ 12 nuclei showed an unexpected nuclear dependence; 10 B and 11 B were measured to explore the EMC effect in this region in more detail. Results are presented for 9 Be, 10 B, 11 B, and 12 C at an incident beam energy of 10.6 GeV. The EMC effect in the boron isotopes was found to be similar to that for 9 Be and 12 C, yielding almost no nuclear dependence in the EMC effect in the range A = 4–12. Furthermore, this represents important new data supporting the hypothesis that the EMC effect depends primarily on the local nuclear environment due to the cluster structure of these nuclei.

6 ≤ A ≤ 19↗

Impact of Clustering on the Li 8 β Decay and Recoil Form Factors

We place unprecedented constraints on recoil corrections in the β decay of 8 Li, by identifying a strong correlation between them and the 8 Li ground state quadrupole moment in large-scale ab initio calculations. The results are essential for improving the sensitivity of high-precision experiments that probe the weak interaction theory and test physics beyond the standard model. In addition, our calculations predict a 2 + state of the α + α system that is energetically accessible to β decay but has not been observed in the experimental 8 Be energy spectrum, and has an important effect on the recoil corrections and β decay for the A = 8 systems. Furthermore, this state and an associated 0 + state are notoriously difficult to model due to their cluster structure and collective correlations, but become feasible for calculations in the ab initio symmetry-adapted no-core shell-model framework.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Ab Initio Study of the Beryllium Isotopes 7 Be to 12 Be

We present a systematic ab initio study of the low-lying states in beryllium isotopes from 7 Be to 12 Be using nuclear lattice effective field theory with the N 3 ⁢LO interaction. Our calculations achieve good agreement with experimental data for energies, radii, and electromagnetic properties. We introduce a novel, model-independent method to quantify nuclear shapes, uncovering a distinct pattern in the interplay between positive and negative parity states across the isotopic chain. By combining Monte Carlo sampling of the many-body density operator with a novel nucleon-grouping algorithm, the prominent two-center cluster structures, the emergence of one-neutron halo, complex nuclear molecular dynamics such as 𝜋 orbital and 𝜎 orbital, emerge naturally.

binding energy & masses↗

Skew-Symmetric adjacency matrices for clustering directed graphs

Graph clustering methods often critically rely on the symmetry of graph matrices. Developing analogous methods for digraphs often proves more challenging, because digraph matrices are typically asymmetric and not orthogonally diagonalizable. However, researchers have recently proposed several complex-valued Hermitian digraph matrices. In particular, one such representation has been utilized as an input to an algorithm for finding imbalanced cuts. In this work, we establish an algebraic relationship between this matrix and an associated real-valued matrix. We show using this real-valued matrix for imbalanced cut-finding algorithms is not only sufficient but advantageous. Our algorithm uses less memory and asymptotically less computation while provably preserving solution quality. We also show our method can be easily implemented using standing computational building blocks, possesses better numerical properties, and loans itself to a natural interpretation via an objective function relaxation argument. We empirically demonstrate these advantages on real world data sets and show how our algorithm can uncover meaningful cluster structure.

Hayashi, Koby↗