Building Structure Mapping on Level Terrains and Sea Surfaces in Vietnam
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Khanh Ngo↗
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Integrating Intelligent Hydro-informatics into an effective Early Warning System for risk-informed urban flood management
The urban drainage system constantly facing flooding issues in coastal and urban areas. Robust and accurate urban flood management, particularly considering fast-moving compound floods, is crucial to minimize the impact of flood disasters in coastal cities. Till now, Ho Chi Minh City (HCMC) lacks an effective means of urban flood management because of flood risk communication among residents. Existing flood risk communication tools rely on post-disaster flood model outcomes and data. Therefore, this research proposes a real-time Early Urban Flooding Warning System (EUFWS) integrated with a user-friendly web and app interface. The backbone of this system consists of flood models developed using machine learning (ML) algorithms, combined with big data and Web-GIS visualization, with ML serving as the core for constructing the EUFWS. EUFWS offer several key advantages: they are available at all times, accessible from anywhere, and provide a real-time, multi-user working platform. Additionally, the system is flexible, allowing for the easy addition of components and services and scalable, adjusting to workload demands. EUFWS have been successfully deployed in Thu Duc City, Vietnam, as a case study and are operating effectively. EUFWS have been successfully deployed in Thu Duc City, Vietnam, as a case study and are operating effectively. Research results indicate that EUFWS supported decision-makers to be effectively risk informed and make intelligent decisions during urban flood emergencies. Finally, this underscores the significant potential of integrating ML and information technology to enhance the management of smart urban drainage systems in flood-prone cities worldwide.
54 ENVIRONMENTAL SCIENCES↗
Assessment of the Biomass Productivity Decline in the Lower Mekong Basin
This study aimed to delineate the geographic hotspots of negative trends in biomass productivity in the Lower Mekong Basin countries (Vietnam, Cambodia, Laos, and Thailand) and identify correlated regional environmental and anthropogenic factors. A long-term time-series (1982–2015) of Normalized Difference Vegetation Index at a resolution of approximately 9.16 km x 9.16 km was used to specify the areas with significant decline or increase in productivity. The relationships between vegetation changes and land attributes, such as climate, population density, soil/terrain conditions, and land-cover types, were examined. Rainfall time-series maps were used to identify areas that might have been affected by land degradation from those correlated with rainfall. Most of the detected potentially degraded areas were found in Cambodia, the Northwest and the Highland of Vietnam, the Northern Mountains of Thailand and Laos, and the mountainous border between Laos, Vietnam, and Cambodia. About 15% of the total land area of these four countries experienced a reduction in biomass productivity during the 34-year study period. The map of hotspots of changes in productivity can be used to direct further studies, including those at finer spatial resolution that may support policy makers and researchers in targeting the strategies for combating land degradation.
land degradation↗
Hydraulic performance and wave transmission through nature-inspired perforated hollow-base piles breakwater
Nature-based Solutions (NbS) are critical to achieving long-term sustainable coastlines in deltaic coastlines, particularly susceptible to severe impacts under climate change. In recent years, coastal erosion has accelerated in the Vietnam Mekong Delta (VMD), particularly in the West Sea (from Ca Mau to Kien Giang). Due to the characteristics of muddy coastlines and eroded mangrove forests in this region, only a few engineering solutions have effectively reduced waves and promoted sediment accumulation to facilitate beach accretion. However, these solutions require significant investment and cannot be relocated or reused. Therefore, this study introduces a coastal mangrove-inspired perforated hollow-base piles breakwater (PHBPB), which uses the principle of biomimicry by studying the ability of mangrove groups to protect the coastline, stimulate sediment deposition, and over time, restore mangrove forests in the VMD. The hydraulic parameters of PHBPB were tested in 260 scenarios using a physical model, which included varying parameters such as crest width (B), pile row numbers (n c ), crest freeboard (R c ), and wave parameters (H s , T p ) in determining the capabilities of wave transmission, reflection, and wave dissipation. The results showed that the process of wave energy dissipation through perforated hollow-base breakwaters without piles (PHBBWP) is governed by three main parameters, including the relative water depth of the crest (R c /H m0,i ), the relative width of the crest (B/H m0,i ), and the wave slope at the structure location (s m = H m0,i /L m ). In contrast, for PHBPB, the primary influencing factors are the relative submergence depth or the length of the submerged pile portion (R c /H m0,i ) and the relative width of the pile system (X b /L m ). Finally, the hollow structure is suitable for the soft, weak mud geology in this region with poor load-bearing capacity, allows for rapid installation, is reasonably cost-effective, and can be relocated and reused once regeneration has been completed in each stretch of coastline.
54 ENVIRONMENTAL SCIENCES↗
Portable Rabies Virus Sequencing in Canine Rabies Endemic Countries Using the Oxford Nanopore MinION
As countries with endemic canine rabies progress towards elimination by 2030, it will become necessary to employ techniques to help plan, monitor, and confirm canine rabies elimination. Sequencing can provide critical information to inform control and vaccination strategies by identifying genetically distinct virus variants that may have different host reservoir species or geographic distributions. However, many rabies testing laboratories lack the resources or expertise for sequencing, especially in remote or rural areas where human rabies deaths are highest. We developed a low-cost, high throughput rabies virus sequencing method using the Oxford Nanopore MinION portable sequencer. A total of 259 sequences were generated from diverse rabies virus isolates in public health laboratories lacking rabies virus sequencing capacity in Guatemala, India, Kenya, and Vietnam. Phylogenetic analysis provided valuable insight into rabies virus diversity and distribution in these countries and identified a new rabies virus lineage in Kenya, the first published canine rabies virus sequence from Guatemala, evidence of rabies spread across an international border in Vietnam, and importation of a rabid dog into a state working to become rabies-free in India. Taken together, our evaluation highlights the MinION’s potential for low-cost, high volume sequencing of pathogens in locations with limited resources.
59 BASIC BIOLOGICAL SCIENCES↗
Pilot reports of disorientation across 14 years of flight.
The purpose of this study was to compare recent incidents involving disorientation in flight reported by 336 Air Force, Army, and Navy pilots with incidents reported by 137 pilots in 1956. The pilots reported their experiences using a check list and a written description of an experience with disorientation in the aircraft they were flying at the time. The latter included 40 incidents which occurred in support of operations in Vietnam. The reports of disorientation showed a striking similarity across types of aircraft flown over 14 years of flying, as well as with the incidents occurring in Vietnam. However, some variation in reports between aircraft types was noted. These reports of disorientation suggest that disorientation is currently experienced in a wide variety of flight operations and that it will continue to be experienced by aircraft pilots.
Clark, B.↗
Land Cover Change Analysis and Spatial Variations in Southeast Asian Nations: Insights on Spatial Scale Dynamics
Land cover type is a fundamental aspect of studies using remote sensing for environmental analysis such as monitoring deforestation, quantifying wildland fire emissions, and more. There are many land cover products available for varying time periods and spatial resolutions, each with different land cover class definitions and number of land cover classes. These differences yield inherent variation in land cover estimates. In this study, we explore the spatial and areal variation between two major datasets for their commonly available time of 2018 to 2022 (MODIS 500m Land Cover and Esri Sentinel-2 10m land cover) in the continental Southeast Asia countries of Cambodia, Laos, Myanmar, Thailand, and Vietnam. To enable comparison, we resampled the datasets and reclassified the land cover classes to a common scheme. Major disagreement was detected between Esri and MODIS, especially for the wetlands/flooded vegetation class in which only 3.6% of pixels were in agreement. In addition to quantifying variation between the datasets, we quantify land cover change at the decadal scale of 2001, 2011, and 2021 for each country and identified province-level hotspots of land cover change. Cambodia experienced the highest rate of land cover change with 67.8% of total land area changed, followed by Vietnam (58.6%), Laos (50.2%), Myanmar (46.9%), and Thailand (46.3%). The highest rate of land cover change was detected in Odtar Mean Chey, Cambodia, which had large swaths of forest area cleared for agricultural production, river damming, and more. Ultimately, many areas in the region experienced forest clearing for crop production (i.e. rice) which appeared to be classified as wetland in the MODIS product, and crop in the Esri product. Myanmar was the only country which did not experience net decline in forest area over the 2001 to 2021 time period.
Land Cover Change↗
Enabling Floating Solar Photovoltaic (FPV) Deployment in Southeast Asia: Overview with Considerations for Aquaculture PV [Slides]
This presentation provides an overview of floating solar photovoltaics (FPV), with specific considerations for Southeast Asia and a focus on aquaculture PV (AquaPV). It was created for the Renewable Energy Buyers Vietnam Working Group, hosted by the Clean Energy Investment Accelerator (CEIA). Both FPV and AquaPV can be found at the intersection of the food-energy-water nexus, with regional implications for energy and food security.
14 SOLAR ENERGY↗
Extinction Dynamics of the Foot-and-Mouth Disease Virus Carrier State Under Natural Conditions
Foot-and-mouth disease (FMD) is one of the most economically important livestock diseases worldwide. Following the clinical phase of FMD, a large proportion of ruminants remain persistently infected for extended periods. Although extinction of this carrier state occurs continuously at the animal and population levels, studies vary widely in their estimates of the duration of persistent infection. There is a need for robust statistical models to capture the dynamics of persistent infection for the sake of guiding FMD control and trade policies. The goal of the current study was to develop and assess statistical models to describe the extinction of FMD virus (FMDV) persistent infection using data from primary longitudinal studies of naturally infected cattle and Asian buffalo in Vietnam and India. Specifically, accelerated failure time (AFT) models and generalized linear mixed models (GLMM) were developed to predict the probability of persistent infection in seropositive animals and identified carriers at the individual animal level at sequential time points after outbreaks. The primary studies were analyzed by country and combined using an individual-participant data meta-analysis approach. The models estimated similar trends in the duration of persistent infection for the study/species groups included in the analyses, however the significance of the trends differed between the models. The overall probabilities of persistent infection were similar as predicted by the AFT and GLMM models: 6 months: 99% (AFT) /80% (GLMM), 12 months: 51% (AFT) /32% (GLMM), 18 months: 6% (AFT) /5% (GLMM), 24 months: 0.8% (AFT) /0.6% (GLMM). These models utilizing diverse and robust data sets predict higher probabilities of persistence than previously published, suggesting greater endurance of carriers subsequent to an outbreak. This study demonstrates the utility of statistical models to investigate the dynamics of persistent infection and the importance of large datasets, which can be achieved by combining data from several smaller studies in meta-analyses. Results of this study enhance current knowledge of the FMDV carrier state and may inform policy decisions regarding FMDV persistent infection.
59 BASIC BIOLOGICAL SCIENCES↗
Assimilation of SMAP Products for Improving Streamflow Simulations over Tropical Climate Region—Is Spatial Information More Important Than Temporal Information?
Streamflow is one of the key variables in the hydrological cycle. Simulation and forecasting of streamflow are challenging tasks for hydrologists, especially in sparsely gauged areas. Coarse spatial resolution remote sensing soil moisture products (equal to or larger than 9 km) are often assimilated into hydrological models to improve streamflow simulation in large catchments. This study uses the Ensemble Kalman Filter (EnKF) technique to assimilate SMAP soil moisture products at the coarse spatial resolution of 9 km (SMAP 9 km), and downscaled SMAP soil moisture product at the higher spatial resolution of 1 km (SMAP 1 km), into the Soil and Water Assessment Tool (SWAT) to investigate the usefulness of different spatial and temporal resolutions of remotely sensed soil moisture products in streamflow simulation and forecasting. The experiment was set up for eight catchments across the tropical climate of Vietnam, with varying catchment areas from 267 to 6430 km^2 during the period 2017–2019. We comprehensively evaluated the EnKF-based SWAT model in simulating streamflow at low, average, and high flow. Our results indicated that high-spatial resolution of downscaled SMAP 1 km is more beneficial in the data assimilation framework in aiding the accuracy of streamflow simulation, as compared to that of SMAP 9 km, especially for the small catchments. Our analysis on the impact of observation resolution also indicates that the improvement in the streamflow simulation with data assimilation is more significant at catchments where downscaled SMAP 1 km has fewer missing observations. This study is helpful for adding more understanding of performances of soil moisture data assimilation based hydrological modelling over the tropical climate region, and exhibits the potential use of remote sensing data assimilation in hydrology.
soil moisture↗
Bayesian merging of numerical modeling and remote sensing for saltwater intrusion quantification in the Vietnamese Mekong Delta
Saltwater intrusion has become one of the most concerning issues in the Vietnamese Mekong Delta (VMD) due to its increasing impacts on agriculture and food security of Vietnam. Reliable estimation of salinity plays a crucial role to mitigate the impacts of saltwater intrusion. Here, this study developed a hybrid technique that merges satellite imagery with numerical simulations to improve the estimation of salinity in the VMD. The salinity derived from Landsat images and by numerical simulations was fused using the Bayesian inference technique. The results indicate that our technique significantly reduces the uncertainties and improves the accuracy of salinity estimates. The Nash–Sutcliffe coefficient is 0.74, which is much higher than that of numerical simulation (0.63) and Landsat estimation (0.6). The correlation coefficient between the ensemble and measured salinity is relatively high (0.88). The variance of the ensemble salinity errors (5.0 ppt 2 ) is lower than that of Landsat estimation (10.4 ppt 2 ) and numerical simulations (9.6 ppt 2 ). The proposed approach shows a great potential to combine multiple data sources of a variable of interest to improve its accuracy and reliability wherever these data are available.
54 ENVIRONMENTAL SCIENCES↗
w Mel replacement of dengue-competent mosquitoes is robust to near-term climate change
Rising temperatures are impacting the range and prevalence of mosquito-borne diseases. A promising biocontrol technology replaces wild mosquitoes with those carrying the virus-blocking Wolbachia bacterium. Because the most widely used strain, wMel, is adversely affected by heat stress, we examined how global warming may influence wMel-based replacement. We simulated interventions in two locations with successful field trials using Coupled Model Intercomparison Project Phase 5 climate projections and historical temperature records, integrating empirical data on wMel’s thermal sensitivity into a model of Aedes aegypti population dynamics to evaluate introgression and persistence over one year. We show that in Cairns, Australia, climatic futures necessitate operational adaptations for heatwaves exceeding two weeks. In Nha Trang, Vietnam, projected heatwaves of three weeks and longer eliminate wMel under the most stringent assumptions of that symbiont’s thermal limits. We conclude that this technology is generally robust to near-term (2030s) climate change. Accelerated warming may challenge this in the 2050s and beyond.
54 ENVIRONMENTAL SCIENCES↗
Lyophilization of ASFV vaccine candidate ASFV-G-ΔI177L offers long term stability
Abstract For over a century African swine fever (ASF) has been causing outbreaks leading to devastating losses for the swine industry. The current pandemic of ASF has shown no signs of stopping and continues to spread causing outbreaks in additional countries. Currently control relies mostly on culling infected farms, and strict biosecurity procedures. Recently a vaccine, ASFV-G-ΔI177L was approved for use in Vietnam. In this study we evaluate the long-term stability of lyophilized ASFV-G-ΔI177L. Understanding the stability of different formulations of vaccines is information necessary for deployment of vaccines to ASF outbreak areas, particularly those that do not have a reliable well established cold chain to ensure conservation of vaccine quality. In this report, we determined that ASFV-G-ΔI177L, when lyophilized under specific conditions, is stable for up to one year at 4 °C, with similar vaccine titers after storage. Next-generation sequencing analysis also determined that lyophilization and long-term storage under these conditions had no effect on the genome of ASFV as the genome remained genetically identical to the original non-lyophilized form.
Science & Technology - Other Topics↗
A global phylogenomic analysis of the shiitake genus Lentinula
Lentinula is a broadly distributed group of fungi that contains the cultivated shiitake mushroom, L. edodes . We sequenced 24 genomes representing eight described species and several unnamed lineages of Lentinula from 15 countries on four continents. Lentinula comprises four major clades that arose in the Oligocene, three in the Americas and one in Asia–Australasia. To expand sampling of shiitake mushrooms, we assembled 60 genomes of L. edodes from China that were previously published as raw Illumina reads and added them to our dataset. Lentinula edodes sensu lato (s. lat.) contains three lineages that may warrant recognition as species, one including a single isolate from Nepal that is the sister group to the rest of L. edodes s. lat., a second with 20 cultivars and 12 wild isolates from China, Japan, Korea, and the Russian Far East, and a third with 28 wild isolates from China, Thailand, and Vietnam. Two additional lineages in China have arisen by hybridization among the second and third groups. Genes encoding cysteine sulfoxide lyase ( lecsl ) and γ-glutamyl transpeptidase ( leggt ), which are implicated in biosynthesis of the organosulfur flavor compound lenthionine, have diversified in Lentinula . Paralogs of both genes that are unique to Lentinula ( lecsl 3 and leggt 5b) are coordinately up-regulated in fruiting bodies of L. edodes . The pangenome of L. edodes s. lat. contains 20,308 groups of orthologous genes, but only 6,438 orthogroups (32%) are shared among all strains, whereas 3,444 orthogroups (17%) are found only in wild populations, which should be targeted for conservation.
59 BASIC BIOLOGICAL SCIENCES↗
GAMMA SPECTRUM STABILIZATION FOR ENVIRONMENTAL RADIATION MONITORING STATIONS USING NAI(TL) DETECTOR
Abstract Gamma spectrum measured by an NaI(Tl) detector is known to be unstable with the in situ temperature. In the present work, an advanced method has been applied to stabilize the gamma spectrum measured by the NaI(Tl) detector at environmental radiation monitoring (ERM) stations. The method is based on experimental data obtained under controlled conditions in laboratory. In the temperature range from 4 to 45°C, the relative deviation of the peak positions within the stabilized gamma spectrum is less than 2%. To test this method in a real scenario, it has been integrated into the ERM station at the Military Institute of Chemical and Environmental Engineering in Hanoi, Vietnam. The results show that the proposed method is ready for a real application.
Hung, Dinh Tien↗
Effectiveness of Electric Vehicle Policies and Implications for Pakistan
This report explores evidence from several key countries regarding the impacts to electric vehicle (EV) market penetration from financial incentives, road access policies, EV mandates, fuel taxes, discounted electricity rates, charging infrastructure, and government investment in the domestic automotive industry. It reviews EV promotional policies in countries that have demonstrated success deploying EVs, focusing on Norway, China, the United States, India, and Korea. It also provides anecdotal examples from select ASEAN countries trying to promote domestic auto industry EV activity, such as Thailand, Indonesia, Philippines, and Vietnam. It provides applicability to policy efforts for growing the EV industry in Pakistan.
29 ENERGY PLANNING, POLICY, AND ECONOMY↗
ASF Vaccine Candidate ASFV-G-ΔI177L Does Not Exhibit Residual Virulence in Long-Term Clinical Studies
African swine fever (ASF) is an important disease in swine currently producing a pandemic affecting pig production worldwide. Except in Vietnam, where two vaccines were recently approved for controlled use in the field, no vaccine is commercially available for disease control. Up to now, the most effective vaccines developed are based on the use of live-attenuated viruses. Most of these promising vaccine candidates were developed by deleting virus genes involved in the process of viral pathogenesis and disease production. Therefore, these vaccine candidates were developed via the genomic modification of parental virus field strains, producing recombinant viruses and reducing or eliminating their residual virulence. In this scenario, it is critical to confirm the absence of any residual virulence in the vaccine candidate. This report describes the assessment of the presence of residual virulence in the ASFV vaccine candidate ASFV-G-ΔI177L in clinical studies conducted under high virus loads and long-term observation periods. The results demonstrated that domestic pigs intramuscularly inoculated with 10 6 HAD 50 of ASFV-G-ΔI177L did not show the presence of any clinical sign associated with ASF when observed daily either 90 or 180 days after vaccination. In addition, necropsies conducted at the end of the experiment confirmed the absence of macroscopic internal lesions associated with the disease. These results corroborate the safety of using ASFV-G-ΔI177L as a vaccine candidate.
59 BASIC BIOLOGICAL SCIENCES↗
African Swine Fever Vaccine Candidate ASFV-G-ΔI177L Produced in the Swine Macrophage-Derived Cell Line IPKM Remains Genetically Stable and Protective against Homologous Virulent Challenge
ASFV vaccine candidate ASFV-G-ΔI177L has been shown to be highly efficacious in inducing protection against challenges with the parental virus, the Georgia 2010 isolate, as well as against field strains isolated from Vietnam. ASFV-G-ΔI177L has been shown to produce protection even when used at low doses (10 2 HAD 50 ) and shows no residual virulence even when administered at high doses (10 6 HAD 50 ) or evaluated for a relatively long period of time (6 months). ASFV-G-ΔI177L stocks can only be massively produced in primary cell macrophages. Alternatively, its modified version (ASFV-G-ΔI177L/ΔLVR) grows in a swine-derived cell line (PIPEC), acquiring significant genomic modifications. We present here the development of ASFV-G-ΔI177L stocks in a swine macrophage cell line, IPKM, and its protective efficacy when evaluated in domestic pigs. Successive passing of ASFV-G-ΔI177L in IPKM cells produces minimal genomic changes. Interestingly, a stock of ASFV-G-ΔI177L obtained after 10 passages (ASFV-G-ΔI177Lp10) in IPKM cells showed very small genomic changes when compared with the original virus stock. ASFV-G-ΔI177Lp10 conserves similar growth kinetics in primary swine macrophage cultures than the original parental virus ASFV-G-ΔI177L. Pigs infected with 10 3 HAD 50 of ASFV-G-ΔI177Lp10 developed a strong virus-specific antibody response and were completely protected against the challenge with the parental virulent field isolate Georgia 2010. Therefore, IPKM cells could be an effective alternative for the production of ASFV vaccine stocks for those vaccine candidates exclusively growing in swine macrophages.
59 BASIC BIOLOGICAL SCIENCES↗