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NASA NTRS2017

Identification of Fungal Colonies on Ground Control and Flight Veggie Plant Pillows

The Veggie system focuses on growing fresh produce that can be harvested and consumed by astronauts. The microbial colonies in each Veggie experiment are evaluated to determine the safety level of the produce and then differences between flight and ground samples. The identifications of the microbial species can detail risks or benefits to astronaut and plant health. Each Veggie ground or flight experiment includes six plants grown from seeds that are glued into wicks in Teflon pillows filled with clay arcillite and fertilizer. Fungal colonies were isolated from seed wicks, growth media, and lettuce (cv. 'Outredgeous') roots grown in VEG-01B pillows on ISS and in corresponding ground control pillows grown in controlled growth chambers. The colonies were sorted by morphology and identified using MicroSeq(TM) 500 16s rDNA Bacterial Identification System and BIOLOG GEN III MicroPlate(TM). Health risks for each fungal identification were then assessed using literature sources. The goal was to identify all the colonies isolated from flight and ground control VEG-01B plants, roots, and rooting medium and compare the resulting identifications.

Scotten, Jessica E.↗

NASA NTRS2019

VEG-04: the Effects of Light Quality on Mizuna Mustard Growth, Nutritional Composition, and Organoleptic Acceptability for a Space Diet

Space crop production will be important in future long duration exploration missions to supplement the packaged diet with fresh bioactive nutrients. Plant care and the addition of fresh veggies to the diet may also have a role in astronaut well-being. Pick-and-eat salad crops are the best candidates for this near-term supplementation since they require minimal processing or preparation to add to meals. While light quality can strongly influence plant responses on Earth, the impacts of light quality on plant growth and composition in spaceflight remain unclear. The VEG-04 experiment uses two Veggie plant growth chambers on the International Space Station to simultaneously test different red: blue light ratios on the growth of Mizuna mustard, a leafy green salad crop. In addition to plant health and yield, the composition of key nutrients is assessed. Astronauts conduct on-board organoleptic evaluation of the fresh produce. Microbial food safety of returned produce is examined, and a Hazard Analysis Critical Control Point (HACCP) plan has been developed for this crop. VEG-04 consists of two experiments, one lasting 28 days with a single harvest, and the second lasting 56 days, with three cut-and-come-again harvests. These different scenarios provide an opportunity to test two production concepts, examine different fertilizers, monitor microbial changes over time for this crop, and assess potential impacts of interacting with plants on crew behavioral health and performance in spaceflight operations. In ground testing, plant growth was not significantly different across the different light treatments, however nutrient composition did differ significantly. Flight test results will be compared with ground data. This research was co-funded by NASA's Human Research Program and Space Biology in the ILSRA 2015 NRA call.

Massa, Gioia D.↗

NASA NTRSDate not supplied

Seed surface sanitization and persistence of E.coli through different tissues of ‘Red Robin’ Tomato (Solanum lycopersicum cv. Red Robin)

Seed surface sanitization via chemical processes removes/reduces microbes from the external surfaces of the seed and thereby could have an impact on the plants’ health or productivity. To determine the impact of seed surface sanitization on the plants’ microbiome, sanitized and unsanitized seeds from ‘Red Robin’ Tomato (Solanumlycopersicum cv. Red Robin) were exposed to Escherichia coli (E. coli) and grown in a controlled environment growth chamber simulating environmental conditions aboard the International Space Station (ISS). Plants were harvested at four intervals, days 11, 33,42 and 76 post-germination. Changes in the microbial communities of leaf, stem, root, and fruit because of E. coli exposure and the persistence of E. coli itself were investigated using aerobic plate count (APC), qPCR and 16S rRNA sequencing. It was determined that E. coli persisted for longer periods of time in plants from sanitized versus unsanitized seeds and was identified in root tissue more frequently than in leaf or stem tissue. E. coli was not detected in fruits raised from either sanitized or unsanitized seeds. The 16S rRNA sequencing showed dynamic changes in the abundance of members of the phylum Proteobacteria, Bacteroidetes, Actinobacteria, and Firmicutes in all tissue types studied. We observed minimal or no changes in the alpha diversity of leaf stem and fruit tissue with time, or between sanitized and unsanitized seeds. Roots showed significant differences in alpha diversity with time and seed sanitization status. Beta-diversity showed that time had more of an influence on all samples versus the E. coli treatment. Members of phyla Proteobacteria and Bacteroidetes were found to be differentially abundant across leaf, stem and root tissue. Our results indicated that the seed surface sanitization, although a requirement for sending seeds to space, might influence the developing microbiome. This research was funded by NASA’s Space Life and Physical Sciences Research and Applications.

Anirudha R Dixit↗

NASA NTRS2016

Comparative Study of Lettuce and Radish Grown Under Red and Blue LEDs and White Fluorescent Lamps

Growing vegetable crops in space will be an essential part of sustaining astronauts during long-range missions. To drive photosynthesis, red and blue light-emitting diodes (LEDs) have attracted attention because of their efficiency, longevity, small size, and safety. In efforts to optimize crop yield, there is also recent interest in analyzing the subtle effects of additional wavelengths on plant growth. For instance, since plants often look purplish gray under red and blue LEDs, the addition of green light allows easy recognition of disease and the assessment of plant health status. However, it is important to know if wavelengths outside the traditional red and blue wavebands have a direct effect on enhancing or hindering the mechanisms involved in plant growth. In this experiment, a comparative study was performed on two short cycle crops of red romaine lettuce (Lactuca sativa cv. "Outredgeous") and radish (Raphanus sativa cv. 'Cherry Bomb'), which were grown under two light treatments. The first treatment being red (630 nm) and blue (450 nm) LEDs alone, while the second treatment consisted of daylight tri-phosphor fluorescent lamps (CCT approximately 5000 K) at equal photosynthetic photon flux (PPF). The treatment effects were evaluated by measuring the fresh biomass produced, plant morphology and leaf dimensions, leaf chlorophyll content, and adenosine triphosphate (ATP) within plant leaf/storage root tissues.

Food Production↗

NASA NTRS2013

Bulk Moisture and Salinity Sensor

Measurement and feedback control of nutrient solutions in plant root zones is critical to the development of healthy plants in both terrestrial and reduced-gravity environments. In addition to the water content, the amount of fertilizer in the nutrient solution is important to plant health. This typically requires a separate set of sensors to accomplish. A combination bulk moisture and salinity sensor has been designed, built, and tested with different nutrient solutions in several substrates. The substrates include glass beads, a clay-like substrate, and a nutrient-enriched substrate with the presence of plant roots. By measuring two key parameters, the sensor is able to monitor both the volumetric water content and salinity of the nutrient solution in bulk media. Many commercially available moisture sensors are point sensors, making localized measurements over a small volume at the point of insertion. Consequently, they are more prone to suffer from interferences with air bubbles, contact area of media, and root growth. This makes it difficult to get an accurate representation of true moisture content and distribution in the bulk media. Additionally, a network of point sensors is required, increasing the cabling, data acquisition, and calibration requirements. measure the dielectric properties of a material in the annular space of the vessel. Because the pore water in the media often has high salinity, a method to measure the media moisture content and salinity simultaneously was devised. Characterization of the frequency response for capacitance and conductance across the electrodes was completed for 2-mm glass bead media, 1- to 2-mm Turface (a clay like media), and 1- to 2-mm fertilized Turface with the presence of root mass. These measurements were then used to find empirical relationships among capacitance (C), the dissipation factor (D), the volumetric water content, and the pore water salinity.

Nurge, Mark↗

NASA NTRS2002

Practical Remote Sensing Application for Agriculture

Aerial surveys of plant health in row crops are converted into crucial farm management information plots for each field. These plots are delivered overnight to subscribing farmers. After review, the plots are converted to machinery control discs and installed on farm equipment to manage the appropriate applications of seed, chemicals and water when and where needed. The process is repeated throughout the crop planting, growing and harvesting season. This entire operation has been installed and tested on four Mississippi Delta farms. Its use demonstrated operational cost savings of more than fifty dollars per acre and increased cotton production by ten percent on average.

Source record↗

NASA NTRS2008

Remote-Sensing Time Series Analysis, a Vegetation Monitoring Tool

The Time Series Product Tool (TSPT) is software, developed in MATLAB , which creates and displays high signal-to- noise Vegetation Indices imagery and other higher-level products derived from remotely sensed data. This tool enables automated, rapid, large-scale regional surveillance of crops, forests, and other vegetation. TSPT temporally processes high-revisit-rate satellite imagery produced by the Moderate Resolution Imaging Spectroradiometer (MODIS) and by other remote-sensing systems. Although MODIS imagery is acquired daily, cloudiness and other sources of noise can greatly reduce the effective temporal resolution. To improve cloud statistics, the TSPT combines MODIS data from multiple satellites (Aqua and Terra). The TSPT produces MODIS products as single time-frame and multitemporal change images, as time-series plots at a selected location, or as temporally processed image videos. Using the TSPT program, MODIS metadata is used to remove and/or correct bad and suspect data. Bad pixel removal, multiple satellite data fusion, and temporal processing techniques create high-quality plots and animated image video sequences that depict changes in vegetation greenness. This tool provides several temporal processing options not found in other comparable imaging software tools. Because the framework to generate and use other algorithms is established, small modifications to this tool will enable the use of a large range of remotely sensed data types. An effective remote-sensing crop monitoring system must be able to detect subtle changes in plant health in the earliest stages, before the effects of a disease outbreak or other adverse environmental conditions can become widespread and devastating. The integration of the time series analysis tool with ground-based information, soil types, crop types, meteorological data, and crop growth models in a Geographic Information System, could provide the foundation for a large-area crop-surveillance system that could identify a variety of plant phenomena and improve monitoring capabilities.

McKellip, Rodney↗

NASA NTRSDate not supplied

Smart Crop Farming Systems for Artemis Exploration Missions

Space crop production systems that mitigate risks of crew poor performance or illness due to inadequate food and nutrition are needed during manned Artemis exploration missions beyond LEO. Prototype farms must be designed for deployment on ISS and tested in manned platforms: Gateway, lunar habitats, and Mars trans-hab spacecraft in preparation for human missions to Mars. Food production must be optimal and safe for human consumption. Thus, plant growth facilities (i.e. Veggie and APH) can be enhanced with imaging systems (including hyperspectral, multispectral, lidar, and fluorescence imaging systems) for nondestructive monitoring of plant health, stress and assessing food safety. Databases of crop responses to stress obtained during ground studies can be used to develop novel artificial intelligence (AI) algorithms for optimizing crop production (i.e. environmental settings during growth) and for detecting crop indices that ensure food safety. Future farming systems should be sustainable and smart. Novel adaptive AI algorithms requiring limited data sets for calibration are needed for reducing crew intervention during plant cultivation except for maintenance and harvesting events. Eventually, AI driven control systems that include autonomous planting, growing, and harvesting as well as periodic sanitization need evaluation for supplementing crew diets with fresh produce during future Mars exploration missions.

O Monje↗

NASA NTRSDate not supplied

RNASeq and Fluorescence Analysis of the Response of ERF2 and ERF104 in Arabidopsis thaliana under Simulated Altered Gravity

As NASA moves closer to long-term human space exploration, the need to understand how to sustain life in space is increasingly pressing. Plants are essential to human sustenance, making it important to understand how spaceflight affects plant health. We used differential gene expression analysis to examine GLDS-251 (RNAseq analysis of the response of Arabidopsis thaliana to fractional gravity under blue-light stimulation during spaceflight) from NASA’s GeneLab data repository and found downregulation of ERF2 and ERF104, transcription factors of the ethylene response factor families, that integrate hormonal pathways involved in abiotic stress responses. Downregulation of ERF2 and ERF104 during spaceflight may indicate a dysregulation of the ethylene signaling pathway. Our hypothesis is that altered gravity downregulates the expression of ERF2 and ERF104 in Arabidopsis thaliana, altering the ethylene signaling pathway and affecting the electron transport chain and light-dependent reactions in chloroplast thylakoids. To test this hypothesis, we propose to grow A. thaliana seedlings (wild-type and mutant/knockout of ERF2 and ERF104) in altered gravity conditions to determine the effects on the expression of ERF2, ERF104, and photosynthesis. We anticipate that ERF2 and ERF104 will be underexpressed in altered gravity conditions and result in decreased regulation of the ethylene signaling pathway.

Arabidopsis↗

NASA NTRS1990

Implementation of sensor and control designs for bioregenerative systems

The EGM 4000/4001 Engineering Design class is an interdisciplinary design course that allows students to experience the design process. The projects involved the design of sensors and subsystems of a closed-loop life support system (CLLSS) with special emphasis on the Controlled Ecological Life Support System (CELSS) currently being developed at Kennedy Space Center (KSC) by NASA. To understand the work performed by the students, one must understand the purpose and concept of a CLLSS system. In the years to come, NASA will be constructing Moon bases and sending astronauts to other worlds on extended space missions. In order to support the crews, unreasonably large quantities of supplies would have to be sent from Earth. These supplies would be difficult to transport and require large holds. To remedy this problem, NASA plans to incorporate crops into the spacecraft. These crops would supply food for the crews, as well as provide beneficial psychological side effects. In addition, the plants would recycle the air and human waste and provide oxygen and water for the humans. The students in the design class were to work on supporting this project. In order to do this successfully, the course was separated into two phases. The first semester involved studying the various aspects of a CLLSS to determine sensing needs and develop ideas. The second semester involved first determining which of the ideas were most promising. Specific sensors were then designed and tested under laboratory conditions with promising results. Finally, recommendations for further development were proposed. Atmosphere and temperature control, nutrient delivery, plant health and propagation, and resource recycling are discussed.

Source record↗

NASA NTRSDate not supplied

Relating Land Cover Change to Runoff Distribution Using NASA Earth Observations in Riley County, Kansas

Riley County, Kansas, has observed increased levels of flooding, potentially due to changes in land use/land cover (LULC) and seasonal vegetation variation. This study contrasts two methods of generating runoff curve numbers (CN) from 2006-2020. (1) The traditional Soil Conservation Service CN calculation method uses a look-up table and tracked LULC to determine runoff changes. These tables allow for CN values specific to various land and crop cover types and account for various farming best practices but lack flexibility in calculations for various seasons or plant health. (2) A dynamic method employs normalized difference vegetation index (NDVI) compiled over the rainy season each year to calculate CN using seasonal vegetation. This method allows for a more precise analysis of runoff variability within and between rainy seasons because it can be updated with greater temporal detail and it captures higher spatial resolutions by using NDVI as a proxy for LULC. This study further uses inputs from the United States Geologic Survey (USGS) National Land Cover Database (NLCD), the United States Department of Agriculture (USDA) Cropland Data Layer, and Landsat imagery to create more precise LULC raster datasets including both urban cover and crop-specific land use and curve number maps of the area. Results can guide decision makers in the City of Manhattan, Riley County Department of Planning and Development, Riley County Conservation District, the Kansas Forest Service, and the Kansas Department of Health and Environment toward informed decisions on resiliency strategies to address future flooding.

Ella Griffith↗

NASA NTRS2020

Riley County Water Resources Project Summary - Comparing Runoff Curve Calculation Methods to Inform Local Resiliency Initiatives in Riley County, Kansas

Riley County, Kansas, has observed increased levels of flooding, potentially due to changes in land use/land cover (LULC) and seasonal vegetation variation. This study contrasts two methods of generating runoff curve numbers (CN) from 2006-2020. (1) The traditional Soil Conservation Service CN calculation method uses a look-up table and tracked LULC to determine runoff changes. These tables allow for land cover-specific CN and account for various farming techniques but lack flexibility in calculations for various seasons or plant health. (2) A dynamic method employs normalized difference vegetation index (NDVI) compiled over the rainy season each year to calculate CN using seasonal vegetation. This method allows for a more precise analysis of runoff variability within and between rainy seasons because it can be updated with greater temporal detail and captures higher spatial resolutions by using NDVI as a proxy for LULC. This study further uses inputs from the United States Geological Survey (USGS) National Land Cover Database (NLCD), the United States Department of Agriculture (USDA) Cropland Data Layer, and Landsat imagery to create more precise LULC raster datasets including both urban cover and crop-specific land use and curve number maps of the area. Results can guide decision makers in the City of Manhattan, Riley County Department of Planning and Development, Riley County Conservation District, the Kansas Forest Service, and the Kansas Department of Health and Environment toward informed decisions on resiliency strategies to address future flooding.

DEVELOP Project Summary↗

NASA NTRS2021

Colorado River Basin Water Resources: Pairing Phenology Citizen Science Observations with NASA Earth Observations to Monitor Riparian Vegetation

Native plant species in the Colorado River Basin are currently threatened by non-native species that are changing resource competition dynamics. Monitoring native species is essential for understanding changes in plant health throughout the year as well as how species’ distributions change inter-annually. However, current monitoring of species is limited to local efforts and cannot be efficiently conducted across more extensive regions of the basin. Project partners, including the USA National Phenology Network, United States Geological Survey, and Educating Children Outdoors, provided data and on-the-ground expertise to assist the project. NASA Earth observations, including Landsat 8 Operational Land Imager (OLI), Aqua and Terra Moderate Resolution Imaging Spectroradiometer (MODIS), and Sentinel-2 MultiSpectral Instrument (MSI) from the European Space Agency, provided remote sensing data that covers the large spatial extent of the basin. This study combined both data sources over the study period of 2013 – 2019 and explored the relationship between on-the-ground phenology observations and remotely sensed phenology signals. The team found that pairing the datasets required spatial coordinates to be accurately logged and that it was necessary to have consistent observations throughout the year by citizen scientists. The team found promising relationships between phenology observations and the two vegetation indices, normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI), when study locations were in an area with a high proportion of vegetation within a satellite pixel. The results and methods outlined in this study create new opportunities to leverage remote sensing alongside citizen science data for widespread monitoring of non-native species.

Tyler Pantle↗

NASA NTRSDate not supplied

The Effects of Plasma Application on Radish Seeds with Implications for Space Crop Production

In extended space missions, the astronaut diet will consist mostly of prepackaged foods. This could result in nutritional deficiencies due to the gradual breakdown of certain vitamins. To address this deficiency, fresh produce must be grown from seed during spaceflight. Stored seeds, however, can be vulnerable to microbial contamination which could jeopardize plant health and crop food safety. To alleviate this concern, the current practice is to sanitize seeds on the ground before spaceflight to the International Space Station (ISS). Methods of seed sanitization include alcohol soaking and chlorine gas fumigation, which have harmful effects on the environment and human health. Plasma application is a new sanitization approach that avoids these negative side effects while potentially elevating germination rate and improving growth rate; yet plasma application requires specific exposure time, power, and pressure to achieve these benefits. In the present study, Raphanus sativus ‘Cherry Belle’ radish seeds were exposed to either low pressure (Diener) plasma or atmospheric pressure plasma for varying increments of time (30s-1200s). Data collected includes immediate germination rate (viability) and microbial log reduction. Additionally, seeds were stored for later germination rate testing. Microbial assay controls have highlighted variability in initial microbial load between individual seeds, and further work is being performed to determine the standard microbial load of an untreated seed. In some samples, a negative log reduction was observed after plasma treatment encouraging further study to determine if the plasma is perforating the seed coat and releasing endophytic microbes. Treatment with Diener plasma shows promising microbial log reduction, but lower viability. In contrast, treatment with atmospheric pressure plasma offers high viability, but poor microbial log reduction. Further study will aim at determining whether plasma treatment is effective at not only sanitization, but sterilization. This research was funded by a NASA grant at the Kennedy Space Center.

Plasma↗

NASA NTRS2021

What are Needed Innovations for Space Crop Production That May Also Benefit Vertical Farming?

I am speaking about the space crop production gaps and challenges we face and how we need innovations in the area of plant health monitoring, food safety contamination monitoring, CEA IPM, understanding of and manipulation of the microbiome/ecosystem, sustainability needs, novel sensors needed, automation and robotics, and also new crops that could be developed and ways that our needs parallel those of the vertical farming industry. (Note: This presentation is in video mp4 format is only viewable by download)

Gioia Massa↗

NASA NTRSDate not supplied

The Effects of Plasma Application on Radish Seeds with Implications for Space Crop Production

Space Crop Production↗

NASA NTRS2022

Drought Monitoring with Drones: A Hundred Fields at a Time

Drought frequency and severity are likely to increase due to global warming. Droughts already have a substantial negative influence on agriculture and the economy and finding ways to reduce their effects could have a monumental impact. Although NASA already has satellites deployed to collect drought data, these satellites are more for global drought indexing than local. To alleviate droughts on a local level, this paper proposes the use of drones to map soil moisture, plant health, and other drought indicators. The proposed drone design is a fixed-wing UAV equipped with a hyperspectral camera, a LiDAR sensor, and an array of weather sensors. These tools will permit it to reliably capture the necessary data to enhance suggestions on improving drought management practices. The collected data from the drones will be deployable in many ways, including for agricultural and non-agricultural applications. The hyperspectral camera has applications in monitoring the health of crops within a field to direct relief measures to the crops most in need. Thermal and LiDAR imaging can be deployed for locating leaks, predicting shortages of water bodies, and determining a field’s water needs. To implement a drought-monitoring drone, the recommended steps include building a prototype drone design that is equipped with the outlined instruments. The prototype drone could then be deployed to collect training data to guide a neural network that would provide interpretations and predictions from the data for users. After the prototype design is iterated upon, it will be ready for deployment and inform water management methods to serve the world in our battle against drought.

climate change↗

NASA NTRS2023

Uncovering Unique Molecular Adaptations in the Arabidopsis Thaliana Cvi-0 Ecotype

This research proposal aims to investigate the unique molecular adaptations exhibited by Arabidopsis Thaliana, specifically focusing on the Cape Verde Islands (Cvi-0) ecotype, in response to microgravity conditions. The study examines data from NASA’s Open Science Data Repository and applies a multifaceted RNAseq analysis pipeline using tools in the UseGalaxy.org open platform. Through transcriptomic analysis, differential gene expression patterns were identified in Cvi-0, revealing an absence of heat shock protein (HSP) upregulation and an upregulation of Rubisco Activase (RCA) and chloroplast-related pathways. To test the hypothesis that these adaptations may contribute to Cvi-0’s increased adaptability in microgravity, a three-fold experimental design is proposed. Four experimental groups will be cultivated under simulated microgravity and ground control conditions, including Cvi-0, Col-0, and genetically modified Col-0 with silenced HSP genes, and genetically modified Col-0 with upregulated RCA gene. Growth parameters will be measured to assess plant resilience, and RNA sequencing will provide transcriptomic data for pathway analysis. Anticipated outcomes include improved markers of plant health (mass, growth, etc.) of Cvi-0 in simulated microgravity and enhanced resilience in genetically altered Col-0 variants, providing insights into potential mechanisms of adaptation. This research would bear significance for space agriculture, nutrition for extended space missions, and sustainable terrestrial crop enhancement. Moreover, the insights gained could reshape crop engineering on Earth, enhancing robustness to climate induced stresses and bolstering global food security. The proposal’s trajectory blends scientific curiosity with practical applicability, forging a path towards sustainable food production and improving human exploration beyond our planet.

GL4HS↗