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Complexity for Survival of Living Systems

A logical connection between the survivability of living systems and the complexity of their behavior (equivalently, mental complexity) has been established. This connection is an important intermediate result of continuing research on mathematical models that could constitute a unified representation of the evolution of both living and non-living systems. Earlier results of this research were reported in several prior NASA Tech Briefs articles, the two most relevant being Characteristics of Dynamics of Intelligent Systems (NPO- 21037), NASA Tech Briefs, Vol. 26, No. 12 (December 2002), page 48; and Self-Supervised Dynamical Systems (NPO- 30634) NASA Tech Briefs, Vol. 27, No. 3 (March 2003), page 72. As used here, living systems is synonymous with active systems and intelligent systems. The quoted terms can signify artificial agents (e.g., suitably programmed computers) or natural biological systems ranging from single-cell organisms at one extreme to the whole of human society at the other extreme. One of the requirements that must be satisfied in mathematical modeling of living systems is reconciliation of evolution of life with the second law of thermodynamics. In the approach followed in this research, this reconciliation is effected by means of a model, inspired partly by quantum mechanics, in which the quantum potential is replaced with an information potential. The model captures the most fundamental property of life - the ability to evolve from disorder to order without any external interference. The model incorporates the equations of classical dynamics, including Newton s equations of motion and equations for random components caused by uncertainties in initial conditions and by Langevin forces. The equations of classical dynamics are coupled with corresponding Liouville or Fokker-Planck equations that describe the evolutions of probability densities that represent the uncertainties. The coupling is effected by fictitious information-based forces that are gradients of the information potential, which, in turn, is a function of the probability densities. The probability densities are associated with mental images both self-image and nonself images (images of external objects that can include other agents). The evolution of the probability densities represents mental dynamics. Then the interaction between the physical and metal aspects of behavior is implemented by feedback from mental to motor dynamics, as represented by the aforementioned fictitious forces. The interaction of a system with its self and nonself images affords unlimited capacity for increase of complexity. There is a biological basis for this model of mental dynamics in the discovery of mirror neurons that learn by imitation. The levels of complexity attained by use of this model match those observed in living systems. To establish a mechanism for increasing the complexity of dynamics of an active system, the model enables exploitation of a chain of reflections exemplified by questions of the form, "What do you think that I think that you think...?" Mathematically, each level of reflection is represented in the form of an attractor performing the corresponding level of abstraction with more details removed from higher levels. The model can be used to describe the behaviors, not only of biological systems, but also of ecological, social, and economics ones.

Zak, Michail↗

The formation of molecules in protostellar winds

The production and destruction processes for molecules in very fast protostellar winds are analyzed and modeled with a one-dimensional chemical kinetics code. Radial density and temperature distributions suggested by protostellar theory are explored as are a range of mass-loss rates. The efficiency of in situ formation of heavy molecules is found to be high if the wind temperature falls sufficiently rapidly, as indicated by theory. The degree of molecular conversion is a strong function of the mass-loss rate and of density gradients associated with the acceleration and collimation of the wind. Even in cases where essentially all of the heavy atoms are processed into molecules, a significant fraction of atomic hydrogen remains so that hghly molecular, protostellar winds are able to emit the 21-cm line. Although CO has a substantial abundance in most models relevant to very young protostars, high abundances of other molecules such as SiO and H2O signify more complete association characteristic of winds containing regions of very high density. Although the models apply only to regions close to the protostar, they are in qualitative accord with recent observations at much larger distances of both atomic and molecular emission from extremely high-velocity flow.

Glassgold, A. E.↗

Small-scale density irregularities in the nightside Venus ionosphere - Comparison of theory and observations

The theory of the lower-hybrid-drift instability is compared with observations of plasma density irregularities. Marginal stability boundaries (gamma = 0) for the lower-hybrid-drift instability and the occurrence of small-scale density fluctuations are presented as a function of magnetic field B and density n. For plasma density gradient scale lengths in the range 2-10 km, 80-85 percent of the density fluctuations lie in the unstable B/n parameter regime (gamma greater than 0). Stability boundaries for the onset of instability at a wavelength for which the Pioneer Venus Orbiter could measure a Doppler-shifted frequency of 100 Hz are presented. The conditions on B and n for instability in this situation are more stringent than those for marginal stability, especially at low densities (n less than or equal to 5000/cu cm). In general, the instability is most likely to be active in regions of low beta: high magnetic field strength and low density, as found in ionospheric holes or troughs.

Huba, J. D.↗

Properties of the solar wind electrons between 1 and 3.3 AU from Ulysses thermal noise measurements

In order to describe the distribution function f(v) of the solar wind electrons, the simplest model which is commonly used consists of the sum of two Maxwellians representing two distinct populations: a core (density n(sub c), temperature T(sub c)) and a halo (density n(sub h), temperature T(sub h)). It is possible, with the latter assumptions on the electron f(v), to determine the quasi-thermal noise (QTN) induced on an antenna by the motion of the ambient electrons in the solar wind. Using this distribution and the spectroscopy of thermal noise measurements from the radio receiver on Ulysses in the ecliptic plane, we deduce the total electron density N(sub e), the core temperature T(sub c), and the core and halo kinetic pressures N(sub c)T(sub c) and N(sub h)T(sub h). From these electron parameters, we can define a 'global' electron temperature as T(sub e) = (N(sub c)T(sub c) + N(sub h)T(sub h))/N(sub e). Here we present different radial gradients of T(sub e), between 1 and 3.3 AU, as a function of three classes of N(sub e) at 1 AU: low, intermediate, and high densities. In general all these gradients are found to be positive with different polytrope power law indexes between N(sub e) and T(sub e), which are in general lower than unity. We also show different behaviors of the ratio N(sub h)T(sub h)/N(sub c)T(sub c) for each density class considered. Some possible interpretations for these observations are discussed.

Maksimovic, M.↗

Vapor Growth of Alloy-Type Semiconductor Crystals

The present effort is part of a continuing research program directed towards the investigation of basic vapor transport phenomena and of crystal growth properties of electronic materials. The primary purpose of ground-based studies is the development and definition of optimum experimental parameters for flight experiments. The ground-based effort includes the investigation of gravity-driven convection effects on mass transport rates and on crystal morphology for different orientations of the density gradient with respect to the gravity vector, and as a function of pressure and of temperature. In addition to the experimental tasks, theoretical efforts involve the quantitative thermodynamic analysis of the systems under investigation, the computation of fluid dynamic parameters, and the consideration of other possible effects on fluid flow under vertical, stabilizing and microgravity conditions. The specific experiments to be performed in a microgravity environment include the investigation of vapor transport and crystal growth phenomena of the GeSe-Xenon system and of the mass flux and growth of bulk and layer-type crystals of Hg sub (1-x) Cd sub x Te using HgI as a transport agent.

Wiedemeier, H.↗

Plasma and magnetospheric research

Research activities on the following topics were summarized: (1) software for the Space Plasma computer Analysis Network (SPAN), (2) plasmaspheric field-aligned temperature gradients, (3) the shift in spacecraft potential as a function of plasma density, (4) plasma flow, (5) the Fabry-Perot interferometer, and (6) the Differential Ion Flux Probe (DIFP).

Comfort, R. H.↗

Seasonally Frozen Soil Monitoring Using Passive Microwave Satellite Data and Simulation Modeling

Satellite data and simulation modeling were used to assess seasonally frozen soils in the central US - Canada borders area (46-53 degrees N and 96-108 degrees). We used Scanning Multichannel Microwave Radiometer (SMMR) satellite data to delineate the top layer of frozen soils. SMMR is a passive microwave sensor having five channels (6.6, 10, 18, 21 and 37 GHz) with a horizontal and vertical polarization. SMRR data are available between 1978-1987 with noon and midnight overpass and footprint sizes between 25 km and 150 km. SMMR data were processed from resampled 1/4 degree grid cells during fall freeze-up and spring thaw (fall 1985 - spring 1987). The dielectric properties of a target may directly affect the satellite signal. The dielectric value is an order of magnitude smaller for frozen soil water. There are other significant changes to the emitted microwave signal from changes to the surface physical temperature, attenuation of the soil signal from plant water and soil moisture. We further characterized the temporal and spatial dynamic of frozen soils using the FroST (Frozen Soil Temperature) simulation model. The FroST model was used to further predict soil water and ice content, and soil temperature. SMMR results were compared versus 5-cm soil temperature data from available weather stations (14 in Canada and 11 for available months in the US). SMMR data were analyzed as a function of frequency, polarization, polarization difference, and "frequency gradient". In addition, vegetation density, physical temperature and snow depth were also considered. Preliminary analysis of SMMR derived frozen soil/thaw classification using a simple threshold classification indicates a mean overall classification accuracy by season of 85 percent. A sensitivity analysis for different soils with varying amounts of snow was conducted with FroST, which showed that the amount of snow, and the time of snow fall and melt affected the ice and water content, and depth of thaw. These results indicate a potential source of flooding and erosion under conditions when melting snow and spring rains provide a source of infiltrating water.

Toll, D. L.↗

A space-time tensor formulation for continuum mechanics in general curvilinear, moving, and deforming coordinate systems

Tensor methods are used to express the continuum equations of motion in general curvilinear, moving, and deforming coordinate systems. The space-time tensor formulation is applicable to situations in which, for example, the boundaries move and deform. Placing a coordinate surface on such a boundary simplifies the boundary condition treatment. The space-time tensor formulation is also applicable to coordinate systems with coordinate surfaces defined as surfaces of constant pressure, density, temperature, or any other scalar continuum field function. The vanishing of the function gradient components along the coordinate surfaces may simplify the set of governing equations. In numerical integration of the equations of motion, the freedom of motion of the coordinate surfaces provides a potential for enhanced resolution of the continuum field function. An example problem of an incompressible, inviscid fluid with a top free surface is considered, where the surfaces of constant pressure (including the top free surface) are coordinate surfaces.

Avis, L. M.↗

Thin Interface Asymptotics for an Energy/Entropy Approach to Phase-Field Models with Unequal Conductivities

Karma and Rapped recently developed a new sharp interface asymptotic analysis of the phase-field equations that is especially appropriate for modeling dendritic growth at low undercoolings. Their approach relieves a stringent restriction on the interface thickness that applies in the conventional asymptotic analysis, and has the added advantage that interfacial kinetic effects can also be eliminated. However, their analysis focussed on the case of equal thermal conductivities in the solid and liquid phases; when applied to a standard phase-field model with unequal conductivities, anomalous terms arise in the limiting forms of the boundary conditions for the interfacial temperature that are not present in conventional sharp-interface solidification models, as discussed further by Almgren. In this paper we apply their asymptotic methodology to a generalized phase-field model which is derived using a thermodynamically consistent approach that is based on independent entropy and internal energy gradient functionals that include double wells in both the entropy and internal energy densities. The additional degrees of freedom associated with the generalized phased-field equations can be chosen to eliminate the anomalous terms that arise for unequal conductivities.

McFadden, G. B.↗

Thermal Protection Systems for Future NASA Space Vehicles

The proposed first through fourth generation of future NASA Reusable Launch Vehicles (RLV) within NASA will be described, in general, along with their relative goals for improvement in performance (i.e., cost, safety, life, and turnaround time). A brief description of Spaceliner 100 activities representing a means to achieve those goals will be included. Some of the families of thermal protection materials with widely varying characteristics that are being developed for first generation space vehicles at Ames Research Center will be described as well as potential materials and composites for second and third generation applications as systems. These families of materials include functionally gradient material composites that are made from a variety of low-density substrates and moderate to fully dense surface treatments providing the resultant material with both toughness and higher temperature capability opening the envelope of Thermal Protection Systems (TPS) capabilities. Some of the materials truly represent enabling technologies that are required to achieve substantially enhanced thermal protection system performance thereby reducing vehicle risk. Finally the needs for integrated vehicle health monitoring (IVHM) of future vehicles thermal protection systems relative to achieving the goals for third generation reusable launch vehicles and for improving vehicle performance and capabilities reducing risk will be described along with the state of the art in TPS.

Leiser, Daniel B.↗

Numerical modeling of quasi-static coronal loops. I - Uniform energy input

A quasi-static numerical model for coronal loops is considered for the case of a uniform energy input per unit volume into the loops. A line dipole model is used to represent the loop magnetic field, and the variations in loop cross section observed in X-ray photographs are parameterized by the ratio between the cross-sectional areas at the loop apex and base. The results of numerical modeling indicate that for an area ratio greater than unity, increases in the area ratio of a loop with a given length and apex area cause a general rise in electron density and a fall in the temperature gradient, leading to large increases in the differential emission factor at high temperatures. The differential function obtained is significantly different from that predicted by analytical models; however, analytical predictions for the temperature-electron density relations are comparable to numerical results. It is also concluded that even a symmetrical loop may have a maximum temperature away from the apex.

Vesecky, J. F.↗

Continuum opacity produced by spectral lines in supernovae and similar expansions

Within rapidly expanding objects such as supernovae, the large velocity gradient Doppler spreads the spectral lines to such an extent that even relatively weak transitions affect the propagation of radiation. It is shown that under appropriate conditions (involving the separation between lines and the velocity gradient), the effects of many lines within a small frequency interval produce a contribution to the transfer equation which acts like an ordinary continuum opacity. This expansion opacity is a surprisingly simple function of the Sobolev optical depth of the lines. The dependence of this opacity on frequency, temperature, density, velocity gradient (1/time), and heavy element abundance is evaluated.

Wagoner, Robert V.↗

Size and DNA distributions of electrophoretically separated cultured human kidney cells

Electrophoretic purification of purifying cultured cells according to function presumes that the size of cycle phase of a cell is not an overriding determinant of its electrophoretic velocity in an electrophoretic separator. The size distributions and DNA distributions of fractions of cells purified by density gradient electrophoresis were determined. No systematic dependence of electrophoretic migration upward in a density gradient column upon either size or DNA content were found. It was found that human leukemia cell populations, which are more uniform function and found in all phases of the cell cycle during exponential growth, separated on a vertical sensity gradient electrophoresis column according to their size, which is shown to be strictly cell cycle dependent.

Kunze, M. E.↗

Effects of Topography on Tropical Forest Structure Depend on Climate Context

Topography affects abiotic conditions which can influence the structure, function, and dynamics of ecological communities. An increasing number of studies have demonstrated biological consequences of fine-scale topographic heterogeneity but we have a limited understanding of how We merged high-resolution (1 sq. meter) data on topography and canopy height derived from airborne lidar with ground-based data from 15 forest plots in Puerto Rico distributed along a precipitation gradient spanning ca. 800 to 3,500 mm yr(exp -1). Ground-based data included species composition, estimated above-ground biomass (AGB), and two key functional traits (wood density and leaf mass per area, LMA) that reflect resource-use strategies and a trade-off between hydraulic safety and hydraulic efficiency. We used hierarchical Bayesian models to evaluate how the interaction between topography climate is related to metrics of forest structure (i.e., canopy height and AGB), as well as taxonomic and functional alpha- and beta-diversity. Fine-scale topography (characterized with the topographic wetness index, TWI) significantly affected forest structure and the strength (and in some cases direction) of these effects varied across the precipitation gradient. In all plots, canopy height increased with topographic wetness but the effect was much stronger in dry compared to wet forest plots. In dry forest plots, topographically wetter microsites also had higher levels of AGB but in wet forest plots, topographically drier microsites had higher AGB. Fine-scale topography influenced functional composition but had only weak or non-significant effects on taxonomic and functional alpha- and beta-diversity. For instance, community-weighted wood density followed a similar pattern to AGB across plots. We also found a marginally significant association between variation of wood density and topographic heterogeneity that depended on climate context. Synthesis: The effects of fine-scale topographic heterogeneity on tropical forest structure and composition depend on the climate context. Our study demonstrates how a stronger integration of topographic heterogeneity across precipitation gradients could improve estimates of forest structure and biomass, and may provide insight to the ways that topography might mediate species responses to drought and climate change.

Tropical dry forest↗

Influence of Mean-Density Gradient on Small-Scale Turbulence Noise

A physics-based methodology is described to predict jet-mixing noise due to small-scale turbulence. Both self- and shear-noise source teens of Lilley's equation are modeled and the far-field aerodynamic noise is expressed as an integral over the jet volume of the source multiplied by an appropriate Green's function which accounts for source convection and mean-flow refraction. Our primary interest here is to include transverse gradients of the mean density in the source modeling. It is shown that, in addition to the usual quadrupole type sources which scale to the fourth-power of the acoustic wave number, additional dipole and monopole sources are present that scale to lower powers of wave number. Various two-point correlations are modeled and an approximate solution to noise spectra due to multipole sources of various orders is developed. Mean flow and turbulence information is provided through RANS-k(epsilon) solution. Numerical results are presented for a subsonic jet at a range of temperatures and Mach numbers. Predictions indicated a decrease in high frequency noise with added heat, while changes in the low frequency noise depend on jet velocity and observer angle.

Khavaran, Abbas↗

Global Core Plasma Model

Abstract. The Global Core Plasma Model (GCPM) provides, empirically derived, core plasma density as a function of geomagnetic and solar conditions throughout the inner magnetosphere. It is continuous in value and gradient and is composed of separate models for the ionosphere, the plasmasphere, the plasmapause, the trough, and the polar cap. The relative composition of plasmaspheric H+, He+, and O+ is included in the GCPM. A blunt plasmaspheric bulge and rotation of the bulge with changing geomagnetic conditions is included. The GCPM is an amalgam of density models, intended to serve as a framework for continued improvement as new measurements become available and are used to characterize core plasma density, composition, and temperature.

Gallagher, Dennis L.↗

Numerical methods for reduction of topside ionograms

Several alternative methods for solving the group height equation are presented. Three of these are now in operation at Ames Research Center and use data contained in a single ionogram trace. From the data an electron density profile N(h) is computed. If the ionogram also exhibits other traces, reverse ionogram traces are computed, using the N(h) profile, for comparison with the redundant data. When agreement is poor, the initial data trace is reinterpreted, another N(h) profile computed, and the reverse traces generated once again. This process is repeated until a desired degree of consistency is achieved. To reduce the necessity for human intervention and eliminate decision making required in conjunction with the preceding methods, a method is proposed that accepts as input, all data from a single ionogram. In general, no electron density function will satisfy these data exactly, but a best N(h) profile can be computed. Finally, a method is described that eliminates the need to assume that the ionosphere is spherically stratified. Horizontal gradients in electron density are detected and accounted for by processing several ionograms from the same satellite pass simultaneously. This idea is derived as an extension of one of the basic methods.

Mcculley, L.↗

Characterization of the thermal conductivity for Advanced Toughened Uni-piece Fibrous Insulations

Advanced Toughened Uni-piece Fibrous Insulations (TUFI) is discussed in terms of their thermal response to an arc-jet air stream. A modification of the existing Ames thermal conductivity program to predict the thermal response of these functionally gradient materials is described in the paper. The modified program was used to evaluate the effect of density, surface porosity, and density gradient through the TUFI materials on the thermal response of these insulations. Predictions using a finite-difference code and calculated thermal conductivity values from the modified program were compared with in-depth temperature measurements taken from TUFI insulations during short exposures to arc-jet hypersonic air streams.

Stewart, David A.↗