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At least 37 records · Page 2

Annual Tropical‐Rainforest Productivity Through Two Decades: Complex Responses to Climatic Factors, [CO 2 ] and Storm Damage

Abstract Yearly changes in tropical carbon‐cycling have been a major biotic determinant of the interannual variation in the rise of atmospheric carbon dioxide ([CO 2 ]). The environmental responses underlying these changes remain poorly understood. A 21‐year field study (1997–2018) in a Costa Rican rainforest has produced the first multi‐decade record of landscape‐scale annual aboveground productivity for a tropical ecosystem. While none of the four production components (wood production; leaf‐, twig‐, and reproductive litterfall) increased over two decades, all significantly varied among years. Multi‐factor environmental models explained a large fraction of the inter‐year changes in two production components. Annual changes in three climatic factors and [CO 2 ] jointly accounted for 84% of the variation in annual wood production. While the strongest response of wood production was to decline in years of slightly warmer nights, it also significantly declined in years with more dry‐season hours hotter than 28°C. The yearly changes in reproductive litterfall were largely (52%) determined by the combined effects of increasing [CO 2 ] and declining annual radiation. Twig litterfall declined over the 21 years. Annual leaf litterfall, the largest component of field‐assessed aboveground production, showed no significant environmental responses. An extreme storm in the study's final year disrupted the environmental controls on production that prevailed through the prior 20 years. While important uncertainties are introduced by some of the field methods for assessing aboveground forest production, the findings of this first long‐term field study of annual landscape‐scale productivity raise deep concerns for the future of tropical forests as global warming proceeds.

54 ENVIRONMENTAL SCIENCES↗

Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy

Abstract Archaeal anaerobic methanotrophs (“ANME”) and sulfate-reducing Deltaproteobacteria (“SRB”) form symbiotic multicellular consortia capable of anaerobic methane oxidation (AOM), and in so doing modulate methane flux from marine sediments. The specificity with which ANME associate with particular SRB partners in situ, however, is poorly understood. To characterize partnership specificity in ANME-SRB consortia, we applied the correlation inference technique SparCC to 310 16S rRNA amplicon libraries prepared from Costa Rica seep sediment samples, uncovering a strong positive correlation between ANME-2b and members of a clade of Deltaproteobacteria we termed SEEP-SRB1g. We confirmed this association by examining 16S rRNA diversity in individual ANME-SRB consortia sorted using flow cytometry and by imaging ANME-SRB consortia with fluorescence in situ hybridization (FISH) microscopy using newly-designed probes targeting the SEEP-SRB1g clade. Analysis of genome bins belonging to SEEP-SRB1g revealed the presence of a complete nifHDK operon required for diazotrophy, unusual in published genomes of ANME-associated SRB. Active expression of nifH in SEEP-SRB1g within ANME-2b—SEEP-SRB1g consortia was then demonstrated by microscopy using hybridization chain reaction (HCR-) FISH targeting nifH transcripts and diazotrophic activity was documented by FISH-nanoSIMS experiments. NanoSIMS analysis of ANME-2b—SEEP-SRB1g consortia incubated with a headspace containing CH4 and 15N2 revealed differences in cellular 15N-enrichment between the two partners that varied between individual consortia, with SEEP-SRB1g cells enriched in 15N relative to ANME-2b in one consortium and the opposite pattern observed in others, indicating both ANME-2b and SEEP-SRB1g are capable of nitrogen fixation, but with consortium-specific variation in whether the archaea or bacterial partner is the dominant diazotroph.

58 GEOSCIENCES↗

Chemolithoautotroph distributions across the subsurface of a convergent margin

Subducting oceanic crusts release fluids rich in biologically relevant compounds into the overriding plate, fueling subsurface chemolithoautotrophic ecosystems. To understand the impact of subsurface geochemistry on microbial communities, we collected fluid and sediments from 14 natural springs across a ~200 km transect across the Costa Rican convergent margin and performed shotgun metagenomics. The resulting 404 metagenome-assembled genomes (MAGs) cluster into geologically distinct regions based on MAG abundance patterns: outer forearc-only (25% of total relative abundance), forearc/arc-only (38% of total relative abundance), and delocalized (37% of total relative abundance) clusters. In the outer forearc, Thermodesulfovibrionia, Candidatus Bipolaricaulia, and Firmicutes have hydrogenotrophic sulfate reduction and Wood-Ljungdahl (WL) carbon fixation pathways. In the forearc/arc, Anaerolineae, Ca. Bipolaricaulia, and Thermodesulfovibrionia have sulfur oxidation, nitrogen cycling, microaerophilic respiration, and WL, while Aquificae have aerobic sulfur oxidation and reverse tricarboxylic acid carbon fixation pathway. Transformation-based canonical correspondence analysis shows that MAG distribution corresponds to concentrations of aluminum, iron, nickel, dissolved inorganic carbon, and phosphate. While delocalized MAGs appear surface-derived, the subsurface chemolithoautotrophic, metabolic, and taxonomic landscape varies by the availability of minerals/metals and volcanically derived inorganic carbon. Furthermore, the WL pathway persists across all samples, suggesting that this versatile, energy-efficient carbon fixation pathway helps shape convergent margin subsurface ecosystems.

59 BASIC BIOLOGICAL SCIENCES↗

A catastrophic tropical drought kills hydraulically vulnerable tree species

Drought-related tree mortality is now a widespread phenomenon predicted to increase in magnitude with climate change. However, the patterns of which species and trees are most vulnerable to drought, and the underlying mechanisms have remained elusive, in part due to the lack of relevant data and difficulty of predicting the location of catastrophic drought years in advance. In this work, we used long-term demographic records and extensive databases of functional traits and distribution patterns to understand the responses of 20–53 species to an extreme drought in a seasonally dry tropical forest in Costa Rica, which occurred during the 2015 El Niño Southern Oscillation event. Overall, species-specific mortality rates during the drought ranged from 0% to 34%, and varied little as a function of tree size. By contrast, hydraulic safety margins correlated well with probability of mortality among species, while morphological or leaf economics spectrum traits did not. This firmly suggests hydraulic traits as targets for future research.

59 BASIC BIOLOGICAL SCIENCES↗

Reduced ecosystem resilience quantifies fine-scale heterogeneity in tropical forest mortality responses to drought

Sensitivity of forest mortality to drought in carbon-dense tropical forests remains fraught with uncertainty, while extreme droughts are predicted to be more frequent and intense. Here, in this study, the potential of temporal autocorrelation of high-frequency variability in Landsat Enhanced Vegetation Index (EVI), an indicator of ecosystem resilience, to predict spatial and temporal variations of forest biomass mortality is evaluated against in situ census observations for 64 site-year combinations in Costa Rican tropical dry forests during the 2015 ENSO drought. Temporal autocorrelation, within the optimal moving window of 24 months, demonstrated robust predictive power for in situ mortality (leave-one- out cross-validation R 2 = 0.54), which allows for estimates of annual biomass mortality patterns at 30 m resolution. Subsequent spatial analysis showed substantial fine-scale heterogeneity of forest mortality patterns, largely driven by drought intensity and ecosystem properties related to plant water use such as forest deciduousness and topography. Highly deciduous forest patches demonstrated much lower mortality sensitivity to drought stress than less deciduous forest patches after elevation was controlled. Our results highlight the potential of high-resolution remote sensing to “fingerprint” forest mortality and the significant role of ecosystem heterogeneity in forest biomass resistance to drought.

59 BASIC BIOLOGICAL SCIENCES↗

1996 Bay Area Travel Study Wave 2

The 1996 Bay Area Travel Study, conducted by the Metropolitan Transportation Commssion, collected demographic, socioeconomic, and travel data for 3,618 households in California's nine-county Bay Area: Alameda, Contra Costa, Marin, Napa, San Francisco, San Mateo, Santa Clara, Solano, and Sonoma counties. The goal of the study was to collect information on activities for all people in each household, regardless of age or relationship. Respondents were asked to record all activities, including trips, over a two-day period. The data gathered during the survey will be used for the area's long-term transportation and air quality planning needs. The survey collected both weekday and weekend multi-day data and was the first activity-based survey conducted in the Bay Area. It also included separate sub-projects. A stated preference congestion pricing survey was administered to 150 of the respondents with a follow-up survey conducted with 110 participants. A follow-up survey was also completed by over half of the 3,618 respondent households to update contact and demographic information. These participants were then used as a panel sample for the 2000 Bay Area Travel Survey (NuStats Research and Consulting 1999).

1Hz data↗

Travel Decision Survey - San Francisco - 2012

On behalf of the San Francisco Municipal Transportation Agency (SFMTA), Corey, Canapary & Galanis undertook a Travel Decision Survey within the City and County of San Francisco, as well the eight surrounding Bay Area counties of Alameda, Contra Costa, San Mateo, Marin, Santa Clara, Napa, Sonoma, and Solano. The primary goals of this study were to accurately assess mode share for trips within San Francisco (including trips to or from San Francisco, but excluding through trips) among city residents and residents of other Bay Area counties; provide additional trip details, including trip purpose information for each trip in the mode-share question series; and use the mode-share percentages collected on this survey in conjunction with total trip estimates provided by SFMTA to project the number of trips by mode on an average day in San Francisco.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Travel Decision Survey - San Francisco - 2013

On behalf of the San Francisco Municipal Transportation Agency (SFMTA), Corey, Canapary & Galanis undertook a Travel Decision Survey within the City and County of San Francisco, as well as the eight surrounding Bay Area counties of Alameda, Contra Costa, San Mateo, Marin, Santa Clara, Napa, Sonoma, and Solano. The primary goals of this study were to: 1. Assess percent mode share for travel in San Francisco for evaluation of the SFMTA Strategic Objective 2.3: Mode Share target of 50% non-private auto travel by FY 2018 with a 95% confidence level and margin of error ±5% or less. 2. Evaluate the above statement based on number of trips to, from, and within San Francisco by Bay Area residents. Trips by visitors to the Bay Area and for commercial purposes are not included. 3. Provide additional trip details, including trip purpose for each trip in the mode-share question series. 4. Collect demographic data on the population of Bay Area residents who travel to, from, and within San Francisco. 5. Collect data on travel behavior and opinions that support other SFMTA strategy and project evaluation needs.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Travel Decision Survey - San Francisco - 2014

On behalf of the San Francisco Municipal Transportation Agency (SFMTA), Corey, Canapary & Galanis undertook a Travel Decision Survey within the City and County of San Francisco, as well as the eight surrounding Bay Area counties of Alameda, Contra Costa, San Mateo, Marin, Santa Clara, Napa, Sonoma, and Solano. The primary goals of this study were to: 1. Assess percent mode share for travel in San Francisco for evaluation of the SFMTA Strategic Objective 2.3: Mode Share target of 50% non-private auto travel by FY 2018 with a 95% confidence level and margin of error ±5% or less. 2. Evaluate the above statement based on number of trips to, from, and within San Francisco by Bay Area residents. Trips by visitors to the Bay Area and for commercial purposes are not included. 3. Provide additional trip details, including trip purpose for each trip in the mode-share question series. 4. Collect demographic data on the population of Bay Area residents who travel to, from, and within San Francisco. 5. Collect data on travel behavior and opinions that support other SFMTA strategy and project evaluation needs.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Travel Decision Survey - San Francisco - 2015

On behalf of the San Francisco Municipal Transportation Agency (SFMTA), Corey, Canapary & Galanis undertook a Travel Decision Survey within the City and County of San Francisco, as well as the eight surrounding Bay Area counties of Alameda, Contra Costa, San Mateo, Marin, Santa Clara, Napa, Sonoma, and Solano. The primary goals of this study were to: 1. Assess percent mode share for travel in San Francisco for evaluation of the SFMTA Strategic Objective 2.3: Mode Share target of 50% non-private auto travel by FY 2018 with a 95% confidence level and margin of error ±5% or less. 2. Evaluate the above statement based on number of trips to, from, and within San Francisco by Bay Area residents. Trips by visitors to the Bay Area and for commercial purposes are not included. 3. Provide additional trip details, including trip purpose for each trip in the mode-share question series. 4. Collect demographic data on the population of Bay Area residents who travel to, from, and within San Francisco. 5. Collect data on travel behavior and opinions that support other SFMTA strategy and project evaluation needs.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Travel Decision Survey - San Francisco - 2017

On behalf of the San Francisco Municipal Transportation Agency (SFMTA), Corey, Canapary & Galanis undertook a Travel Decision Survey within the City and County of San Francisco, as well as the eight surrounding Bay Area counties of Alameda, Contra Costa, San Mateo, Marin, Santa Clara, Napa, Sonoma, and Solano. The primary goals of this study were to: 1. Assess percent mode share for travel in San Francisco for evaluation of the SFMTA Strategic Objective 2.3: Mode Share target of 50% non-private auto travel by FY 2018 with a 95% confidence level and margin of error ±5% or less. 2. Evaluate the above statement based on number of trips to, from, and within San Francisco by Bay Area residents. Trips by visitors to the Bay Area and for commercial purposes are not included. 3. Provide additional trip details, including trip purpose for each trip in the mode-share question series. 4. Collect demographic data on the population of Bay Area residents who travel to, from, and within San Francisco. 5. Collect data on travel behavior and opinions that support other SFMTA strategy and project evaluation needs.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Pantropical Tree Sapwood Area Data, 1977 - 2015

This data package containsata synthesis of pantropical sapwood area as a function of tree size (height or DBH) for trees ranging in sizes 1 - 140 cm DBH and 6 - 44 m tall. Data span both natural tropical forests and plantations and rainfall gradients from deciduous dry tropical forests to everwet tropical forests, and come from the following countries: Queensland, Australia; Costa Rica; Panama; Sulawesi, Indonesia; Venezuela; Ecuador; Brazil; French Guiana; Bolivia. Three CSV files are included: SA_headers.csv: description of variables in the two files below SA.csv: tree size (DBH or height) sapwood area SA_references.csv: citation, bibliographic reference, and DOI for the published references from which data were extracted

54 ENVIRONMENTAL SCIENCES↗

Pantropical Tree Sapwood Hydraulic Properties, 1991 - 2014

This data package contains sapwood pressure-volume parameters including osmotic potential at full turgot, turgor loss point, bulk elastic modulus, and others, determined by curve fitting to raw isotherm data (paired measurements of water content and water potential). Raw data were digitized from published figures. Data are from natural tropical and subtropical forests or savannas and span rainfall gradients from deciduous dry tropical forests to everwet tropical forests, and come from the following countries: Argentina, Panama, Brazil, Costa Rica, and Madagascar. Included in the attached zip file are four CSV files. sapwood_PV_recal_headers.csv: description of variables in the two files below sapwood_PV_recal_corrected.csv: bias-corrected sapwood PV data (see Methods in the associated reference) sapwood_PV_recal_uncorrected.csv: uncorrected sapwood PV data (see Methods in the associated reference) sapwood_PV_references.csv: citation, bibliographic reference, and DOI for the published references from which data were extracted.

54 ENVIRONMENTAL SCIENCES↗

AmeriFlux AmeriFlux CR-SoC Soltis Center

This is the AmeriFlux version of the carbon flux data for the site CR-SoC Soltis Center. Site Description - The Texas A&M Soltis Center for Research and Education is located in San Juan de Peñas Blancas, San Ramón, Costa Rica. In 2009, Charles W. "Bill" and Wanda Soltis donated a new facility to the university and granted it a long-term lease on the adjacent 250 acres of land. The site hosts both primary and secondary growth rainforest, the later of which was selectively logged between the 1950's and the 1990's. It is best classified as a lower montane forest, located in the transitional area between the upper and lower montane cloud forests and the lowland rainforests. Temperatures average 23°C with 4200 mm/yr of rainfall; a short drier period typically occurs between January and April. Estimates suggest that the site hosts more than 2000 species of vascular plants, with dominant vegetation types including plants in the Sapotaceae, Moracea, and Malvaceae families.

Cahill, Anthony T.↗

Site 300 Bat Survey Report

A review of prior bat records in literature and museum collections for the five counties around Site 300 (Alameda, Contra Costa, San Joaquin, Santa Clara, and Stanislaus) identified 1038 specimens of 15 species. No roosting bats or bat sign indicating roosting were observed in examining samples of structures on Site 300 both day and night. Acoustic monitoring and visual observation detected seven to nine species, including three special status species -- the pallid bat, Antrozous pallidus, the western red bat, Lasiurus blossevillii and the Yuma myotis, Myotis yumanensis. An additional special status species, the long-legged myotis, Myotis volans was possibly present. As a consequence of the windy conditions typically encountered, no bats were caught in mist net sampling, though simultaneous acoustic monitoring demonstrated bats were present at those locations.

54 ENVIRONMENTAL SCIENCES↗

Scat Detection Dog Surveys for the San Joaquin Kit Fox on the Lawrence Livermore National Laboratory's Experimental Test Site (Site 300) and the Corral Hollow Ecological Reserve: 2020 Deployment

The San Joaquin kit fox (Vulpes macrotis mutica) historically occupied an extensive range in the San Joaquin Valley, California; however, their populations and habitat have since been significantly reduced by human impacts (United States Fish and Wildlife Service [USFWS] 1998). More than 95% of the potential habitat for kit foxes on the San Joaquin Valley floor has been converted to irrigated agriculture, urbanized, or industrialized lands. The San Joaquin kit fox was listed as endangered by the USFWS in 1967 and as threatened by the State of California in 1971. Records from local surveys, research projects, and incidental sightings indicate the present distribution of kit foxes extends from 1) southern Kern County north to Contra Costa, Alameda, and San Joaquin counties on the west side of the valley and to Stanislaus County on the east side; 2) into some of the larger, uncultivated valley-floor land parcels in Kern, Tulare, Kings, Fresno, Madera, and Merced counties; and 3) westward within 5 counties in the interior coastal range (USFWS 1998). Kit foxes have been denoted to occur in 3 geographically distinct core and several satellite populations in a heavily fragmented landscape, with the largest extant populations concentrated in the southern part of the range and smaller populations and isolated sightings in the central and northern portions (USFWS 1998, 2010).

54 ENVIRONMENTAL SCIENCES↗

Fuel Cell Buses in U.S. Transit Fleets: Current Status 2020

This report summarizes the progress of fuel cell electric bus (FCEB) development in the United States and discusses the achievements and challenges of introducing fuel cell propulsion in transit. The report provides a summary of results from evaluations performed by the U.S. Department of Energy's (DOE's) National Renewable Energy Laboratory (NREL). The 2020 summary results primarily focus on the most recent data on these FCEBs, from January 2020 through July 2020. The primary results presented in the report are from 25 FCEBs deployed at three agencies: Alameda-Contra Costa Transit District (AC Transit) in Oakland, California (10 FCEBs); Orange County Transportation Authority (OCTA) in Santa Ana, California (10 FCEBs); SunLine Transit Agency in Thousand Palms, California (5 FCEBs).

08 HYDROGEN↗

AC Transit Fuel Cell Electric Bus Progress Report (Data Period Focus: Jan. 2020 through Dec. 2020) [Slides]

This report presents early results from a deployment of fuel cell electric buses (FCEBs) operated by Alameda Contra-Costa Transit (AC Transit) in the east bay area of California. The ten FCEBs, produced by New Flyer, feature an electric drive propulsion system powered by a Ballard fuel cell system. The project team is collaborating with the U.S. Department of Energy (DOE) and DOE's National Renewable Energy Laboratory (NREL) to evaluate the buses in revenue service. The goal of this evaluation is to compare the FCEB performance to that of conventional technology and to track progress over time toward meeting the technical targets set by DOE and the Department of Transportation (DOT). The FCEBs were delivered beginning in late-2019. The data period covers January 2020 through July 2020. NREL collects data on two different baseline bus fleets for comparison: five 2017 model year diesel buses and five 2016 model year diesel hybrid buses.

30 DIRECT ENERGY CONVERSION↗