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ATLAS HL-LHC Demonstrators with Data Carousel: Dataon-Demand and Tape Smart Writing

The High Luminosity upgrade to the LHC (HL-LHC) is expected to deliver scientific data at the multi-exabyte scale. To tackle this unprecedented data storage challenge, the ATLAS experiment initiated the Data Carousel project in 2018. Data Carousel is a tape-driven workflow in which bulk production campaigns with input data resident on tape are executed by staging and promptly processing a sliding window to disk buffer such that only a small fraction of inputs are pinned on disk at any one time. Put in ATLAS production before Run3, Data Carousel continues to be our focus for seeking new opportunities in disk space savings, and enhancing tape usage throughout the ATLAS Distributed Computing (ADC) environment. These efforts are highlighted by two recent ATLAS HL-LHC demonstrator projects: data-on-demand and tape smart writing. In this paper, we will discuss the recent studies and outcomes from these projects. The research was conducted together with site experts at CERN and Tier-1 centers.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Genomic analysis of 1710 surveillance-based Neisseria gonorrhoeae isolates from the USA in 2019 identifies predominant strain types and chromosomal antimicrobial-resistance determinants

This study characterized high-quality whole-genome sequences of a sentinel, surveillance-based collection of 1710 Neisseria gonorrhoeae (GC) isolates from 2019 collected in the USA as part of the Gonococcal Isolate Surveillance Project (GISP). It aims to provide a detailed report of strain diversity, phylogenetic relationships and resistance determinant profiles associated with reduced susceptibilities to antibiotics of concern. The 1710 isolates represented 164 multilocus sequence types and 21 predominant phylogenetic clades. Common genomic determinants defined most strains’ phenotypic, reduced susceptibility to current and historic antibiotics (e.g. bla TEM plasmid for penicillin, tetM plasmid for tetracycline, gyrA for ciprofloxacin, 23S rRNA and/or mosaic mtr operon for azithromycin, and mosaic penA for cefixime and ceftriaxone). The most predominant phylogenetic clade accounted for 21 % of the isolates, included a majority of the isolates with low-level elevated MICs to azithromycin (2.0 µg ml –1 ), carried a mosaic mtr operon and variants in PorB, and showed expansion with respect to data previously reported from 2018. The second largest clade predominantly carried the GyrA S91F variant, was largely ciprofloxacin resistant (MIC ≥1.0 µg ml –1 ), and showed significant expansion with respect to 2018. Overall, a low proportion of isolates had medium- to high-level elevated MIC to azithromycin ((≥4.0 µg ml –1 ), based on C2611T or A2059G 23S rRNA variants). One isolate carried the penA 60.001 allele resulting in elevated MICs to cefixime and ceftriaxone of 1.0 µg ml –1 . This high-resolution snapshot of genetic profiles of 1710 GC sequences, through a comparison with 2018 data (1479 GC sequences) within the sentinel system, highlights change in proportions and expansion of select GC strains and the associated genetic mechanisms of resistance. The knowledge gained through molecular surveillance may support rapid identification of outbreaks of concern. Continued monitoring may inform public health responses to limit the development and spread of antibiotic-resistant gonorrhoea.

(3-6) antimicrobial resistance↗

Isoprene, Chlorophyll fluorescence, and leaf temperature data from Manaus, Brazil, 2017 - 2018

The data included in this data package are a demonstration of an inverse relationship in the early successional species Vismia guianensis in the central Amazon between stomatal conductance (gs) and leaf temperature, while net photosynthesis (Pn) showed an optimum value of 32.6 ± 0.4°C. In contrast to Pn, photosynthetic electron transport rates (ETR) and the QA oxidation state (qL) increased linearly with leaf temperature. Leaf isoprene emissions, a primary product of photosynthesis and strongly linked to plant high temperature stress tolerance, showed strong linear correlations with ETR (ƿ = 0.98) and qL (ƿ = 0.99). Furthermore, inhibition of isoprenoid biosynthesis repressed Pn at high temperatures through a mechanism that was independent of stomatal closure. Data is used in the publication, "Stimulation of isoprene emissions and electron transport rates as a key mechanism of thermal tolerance in the tropical species Vismia guianensis." See the below Dataset References field for the full citation.

54 ENVIRONMENTAL SCIENCES↗

Low-Income Energy Affordability Data - LEAD Tool - 2018 Update

The Low-Income Energy Affordability Data (LEAD) Tool was created by the Better Building's Clean Energy for Low Income Communities Accelerator (CELICA) to help state and local partners understand housing and energy characteristics for the low- and moderate-income (LMI) communities they serve. The LEAD Tool provides estimated LMI household energy data based on income, energy expenditures, fuel type, housing type, and geography, which stakeholders can use to make data-driven decisions when planning for their energy goals. From the LEAD Tool website, users can also create and download customized heat-maps and charts for various geographies, housing, and energy characteristics. Datasets are available for 50 states plus Puerto Rico and Washington D.C., along with their cities, counties, and census tracts. The file below, "1. Description of Files," provides a list of all files included in this dataset. A description of the abbreviations and units used in the LEAD Tool data can be found in the file below titled "2. Data Dictionary 2018". The Low-Income Energy Affordability Data comes primarily from the 2018 U.S. Census American Community Survey 5-Year Public Use Microdata Samples and is calibrated to 2018 U.S. Energy Information Administration electric utility (Survey Form-861) and natural gas utility (Survey Form-176) data. The methodology for the LEAD Tool can viewed below (3. Methodology Document). For more information, and to access the interactive LEAD Tool platform, please visit: https://www.energy.gov/eere/slsc/low-income-energy-affordability-data-lead-tool For more information on the Better Building's Clean Energy for Low Income Communities Accelerator (CELICA), visit: https://betterbuildingsinitiative.energy.gov/accelerators/clean-energy-low-income-communities

affordability↗

Performance of the NA62 trigger system

The NA62 experiment at CERN targets the measurement of the ultra-rare $K^{+}→π^{+}ν\bar{ν}$ decay, and carries out a broad physics programme that includes probes for symmetry violations and searches for exotic particles. Data were collected in 2016–2018 using a multi-level trigger system, which is described highlighting performance studies based on 2018 data.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Search for production of four top quarks in final states with same-sign or multiple leptons in proton–proton collisions at $\sqrt{s}=13$ ${TeV}$

The standard model (SM) production of four top quarks ($\text {t} {}{\overline{\text {t}}} \text {t} {}{\overline{\text {t}}} $) in proton–proton collisions is studied by the CMS Collaboration. The data sample, collected during the 2016–2018 data taking of the LHC, corresponds to an integrated luminosity of 137$\,\text {fb}^{-1}$ at a center-of-mass energy of 13$\,\text {TeV}$. The events are required to contain two same-sign charged leptons (electrons or muons) or at least three leptons, and jets. The observed and expected significances for the $\text {t} {}{\overline{\text {t}}} \text {t} {}{\overline{\text {t}}} $ signal are respectively 2.6 and 2.7 standard deviations, and the $\text {t} {}{\overline{\text {t}}} \text {t} {}{\overline{\text {t}}} $ cross section is measured to be $12.6^{+5.8}_{-5.2}\,\text {fb} $. The results are used to constrain the Yukawa coupling of the top quark to the Higgs boson, $y_{\text {t}}$, yielding a limit of $|y_{\text {t}}/y_{\text {t}}^{\mathrm {SM}} | < 1.7$ at $95\%$ confidence level, where $y_{\text {t}}^{\mathrm {SM}}$ is the SM value of $y_{\text {t}}$. They are also used to constrain the oblique parameter of the Higgs boson in an effective field theory framework, $\hat{H}<0.12$. Limits are set on the production of a heavy scalar or pseudoscalar boson in Type-II two-Higgs-doublet and simplified dark matter models, with exclusion limits reaching 350–470$\,\text {GeV}$ and 350–550$\,\text {GeV}$ for scalar and pseudoscalar bosons, respectively. Upper bounds are also set on couplings of the top quark to new light particles.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Anomalies in the topology of the temperature fluctuations in the cosmic microwave background: An analysis of the NPIPE and FFP10 data releases

We present a topological analysis of the temperature fluctuation maps from the Planck 2020 Data Release 4 NPIPE dataset and the Planck 2018 Data Release 3 FFP10 dataset. We performed a multiscale analysis in terms of the homology characteristics of the maps, invoking relative homology to account for the analysis in the presence of masks. We performed our analysis for a range of smoothing scales spanning sub- and super-horizon scales corresponding to a full width at half maximum (FWHM) of 5',10',20',40',80',160',320', and 640', and employed simulations based on the standard model for comparison, which assumes the initial fluctuation field to be an isotropic and homogeneous Gaussian random field. Examining the behavior of topological components, represented by the 0D homology group, we find the observations to be approximately 2σ or less deviant from the simulations for all resolutions and scales for the NPIPE dataset. For the FFP10 dataset, we detect a 2.96σ deviation between the observations and simulations at N = 128, FWHM = 80'. For the topological loops, represented by the first homology group, the simulations and observations are consistent within 2σ for most resolutions and scales for both the datasets. However, for the NPIPE dataset, we observe a high deviation between the observation and simulations in the number of loops at FWHM = 320', but at a low dimensionless threshold ν = –2.5. Under a Gaussian assumption, this would amount to a deviation of ~4σ. However, the distribution in this bin is manifestly non-Gaussian and does not obey Poisson statistics either. In the absence of a true theoretical understanding, we simply note that the significance is higher than what may be resolved by 600 simulations, yielding an empirical p-value of at most 0.0016. Specifically in this case, our tests indicate that the numbers arise from a statistically stable regime, despite being based on small numbers. For the FFP10 dataset, the differences are not as strong as for the NPIPE dataset, indicating a 2.77σ deviation at this resolution and threshold. The Euler characteristic, which is the alternating sum of the ranks of relative homology groups, reflects the deviations in the components and loops. To assess the significance of combined levels for a given scale, we employed the empirical and theoretical versions of the χ 2 test as well as the nonparametric Tukey depth test. Although all statistics exhibit a stable distribution, we favor the empirical version of the χ 2 test in the final interpretation, as it indicates the most conservative differences. For the NPIPE dataset, we find that the components and loops differ at more than 95%, but agree within the 99% confidence level with respect to the base model at N = 32, FWHM = 320'. The Euler characteristic at this resolution displays a per mil deviation. In contrast, the FFP10 dataset shows that the observations are consistent with the base model within the 95% confidence level, at this and smaller scales. This is consistent with the observations of the Planck analysis pipeline via Minkowski functionals. For the largest smoothing scale, N = 16, FWHM = 640', both datasets exhibit an anomalous behavior of the loops, where FFP10 data exhibit a deviation that is larger by an order of magnitude than that of the NPIPE dataset. In contrast, the values for the topological components and the Euler characteristic agree between observations and model to within a confidence level of 99%. However, for the largest scales, the statistics are based on low numbers and may have to be regarded with caution. Even though both datasets exhibit mild to significant discrepancies, they also exhibit contrasting behaviors at various instances. Therefore, we do not find it feasible to convincingly accept or reject the null hypothesis. Disregarding the large-scale anomalies that persist at similar scales in WMAP and Planck, observations of the cosmic microwave background are largely consistent with the standard cosmological model within 2σ.

79 ASTRONOMY AND ASTROPHYSICS↗

The ATLAS inner detector trigger performance in pp collisions at 13 TeV during LHC Run 2

The design and performance of the inner detector trigger for the high level trigger of the ATLAS experiment at the Large Hadron Collider during the 2016–2018 data taking period is discussed. In 2016, 2017, and 2018 the ATLAS detector recorded 35.6 fb –1 , 46.9 fb –1 , and 60.6 fb –1 respectively of proton–proton collision data at a centre-of-mass energy of 13 TeV. In order to deal with the very high interaction multiplicities per bunch crossing expected with the 13 TeV collisions the inner detector trigger was redesigned during the long shutdown of the Large Hadron Collider from 2013 until 2015. An overview of these developments is provided and the performance of the tracking in the trigger for the muon, electron, tau and b-jet signatures is discussed. The high performance of the inner detector trigger with these extreme interaction multiplicities demonstrates how the inner detector tracking continues to lie at the heart of the trigger performance and is essential in enabling the ATLAS physics programme.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Measurement of the very rare K+ → $ {\pi}^{+}\nu \overline{\nu} $ decay

The NA62 experiment reports the branching ratio measurement BR K + → π + ν ν ¯ = 10.6 - 3.4 + 4.0 stat ± 0.9 syst × 10 - 11 at 68% CL, based on the observation of 20 signal candidates with an expected background of 7.0 events from the total data sample collected at the CERN SPS during 2016–2018. This provides evidence for the very rare K + → π + ν ν ¯ decay, observed with a significance of 3.4 σ . The experiment achieves a single event sensitivity of (0 . 839 ± 0 . 054) × 10 - 11 , corresponding to 10.0 events assuming the Standard Model branching ratio of (8 . 4 ± 1 . 0) × 10 - 11 . This measurement is also used to set limits on BR( K + → π + X ), where X is a scalar or pseudo-scalar particle. Details are given of the analysis of the 2018 data sample, which corresponds to about 80% of the total data sample.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Predictive analytics to direct clinical attention to complex patients with elevated suicide risk: enhancement of the Veterans Health Administration REACH VET model

Suicide is a major public health concern, particularly among Veterans. The U.S. Department of Veterans Affairs Veterans Health Administration (VHA) employs the Recovery Engagement and Coordination for Health–Veterans Enhanced Treatment (REACH VET) model to prioritise high-risk patients for targeted clinical attention. REACH VET 1.0 (RV 1.0) was developed on 2008–2011 data. To reflect changes in clinical practice and populations, VHA updated it to REACH VET 2.0 (RV 2.0). This study describes its development and validation. RV 2.0 used longitudinal data from 7,248,170 VHA patients (4,967 suicide deaths) in 2018–2019, with 650 time-varying demographic, clinical and area-level predictors derived from a 2-year lookback (2016–2019). An ensemble of Elastic-Net logistic regression models was trained on 2018 data and evaluated monthly at the population level in 2019, focusing on the top 0.1% intervention risk tier. Analyses assessed model discrimination, suicide detection, risk concentration, subgroup consistency (sex, age and race/ethnicity) and performance relative to RV 1.0 using the same percentile-based risk strata. RV 2.0 outperformed RV 1.0 across all risk strata, with better discrimination (C-statistic 0.76 vs 0.69) and consistent performance across demographic subgroups. Within the top 0.1% of predicted risk, RV 2.0 identified more deaths, higher suicide rates and greater mortality risk concentration both when averaged across the 12 monthly 2019 test sets (5.6 vs 3.6; 83.6 vs 53.7 per 100,000 person-years; 21.0 vs 14.1) and when annualised for 2019 (67 vs 43; 2.7% vs 1.7%; 1,003 vs 644 per 100,000 person-years; 26.7 vs 17.1). RV 2.0 improves suicide risk stratification among Veterans, demonstrating better performance and consistent prediction across subgroups and highlighting the need for regular model updates and evaluation.

Peluso, Alina [Oak Ridge National Laboratory (ORNL↗

Binding Affinity Prediction by Pairwise Function Based on Neural Network

In this paper, we present a new approach to estimate the binding affinity from given three-dimensional poses of protein–ligand complexes. In this scheme, every protein–ligand atom pair makes an additive free-energy contribution. The sum of these pairwise contributions then gives the total binding free energy or the logarithm of the dissociation constant. The pairwise contribution is calculated by a function implemented via a neural network that takes the properties of the two atoms and their distance as input. The pairwise function is trained using a portion of the PDBbind 2018 data set. The model achieves good accuracy for affinity predictions when evaluated with PDBbind 2018 and with the CASF-2016 benchmark, comparing favorably to many scoring functions such as that of AutoDock Vina. The framework here may be extended to incorporate other factors to further improve its accuracy and power.

59 BASIC BIOLOGICAL SCIENCES↗

Measurement of the free neutron lifetime in a magneto-gravitational trap with in situ detection

Here, in this study, we publish three years of data from the UCNτ experiment performed at the Los Alamos Ultracold Neutron Facility at the Los Alamos Neutron Science Center. These data are in addition to our previously published data. Our goals in this paper are to better understand and quantify systematic uncertainties and to improve the lifetime statistical precision. We previously reported a value from our 2017–2018 data for the neutron lifetime of 877.75 ± 0.28 (statistical) +0.22–0.16 (systematic) s. We have collected an additional three years of data reported here for the first time. When all the data from UCNτ are averaged for 2017, 2018, 2020, 2021, and 2022, we report an updated value for the lifetime of 877.83 ± 0.22 (statistical)+0.20–0.17 (systematic) s. We utilized improved monitor detectors, reduced our correction due to UCN upscattering on residual gas, and employed four different UCN detector geometries both to reduce the correction required for rate dependence and to explore potential contributions due to phase space evolution.

Cabibbo-Kobayashi-Maskawa matrix↗

Measurement of the inclusive and differential $t\overline{t}γ$ cross sections in the single-lepton channel and EFT interpretation at $\sqrt{s}$ = 13 TeV

The production cross section of a top quark pair in association with a photon is measured in proton-proton collisions at a center-of-mass energy of 13 TeV. The data set, corresponding to an integrated luminosity of 137 fb -1 , was recorded by the CMS experiment during the 2016–2018 data taking of the LHC. The measurements are performed in a fiducial volume defined at the particle level. Events with an isolated, highly energetic lepton, at least three jets from the hadronization of quarks, among which at least one is b tagged, and one isolated photon are selected. The inclusive fiducial $t\overline{t}γ$ cross section, for a photon with transverse momentum greater than 20 GeV and pseudorapidity |η| < 1.4442, is measured to be 798 ± 7(stat) ± 48(syst) fb, in good agreement with the prediction from the standard model at next-to-leading order in quantum chromodynamics. The differential cross sections are also measured as a function of several kinematic observables and interpreted in the framework of the standard model effective field theory (EFT), leading to the most stringent direct limits to date on anomalous electromagnetic dipole moment interactions of the top quark and the photon.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Could on-site fuel storage economically reduce power plant-gas grid dependence in pipeline constrained areas like New England?

In the Northeastern United States, natural gas supply constraints have led to periods when gas shortages have caused up to a quarter of all unscheduled power plant outages. Dual fuel oil/gas generators or local gas storage might mitigate gas supply shortages. We use historical power plant operational and availability data to develop a supply curve of the costs required for generators to mitigate fuel shortage failures in New England. Based on 2012–2018 data, we find that the historical fuel shortages at approximately 2 GW worth of gas-fired capacity could be mitigated using on-site fuel storage. For comparison, New England’s average reserve margin was 1.7–2.8 GW over our sample period. Oil dual fuel plants would recoup their investment if compensated with a reliability adder of $\$ 3-7$/MWh during their normal operations, while $\$ 7-16$/MWh would incentivize using onsite, compressed natural gas storage. We estimate that the capital expenses associated with the fuel storage options would be less expensive than installing battery backup for resource adequacy at current battery prices.

03 NATURAL GAS↗

Model-independent search for pair production of new bosons decaying into muons in proton-proton collisions at $\sqrt{s}$ = 13 TeV

The results of a model-independent search for the pair production of new bosons within a mass range of 0.21 < m < 60 GeV, are presented. This study utilizes events with a four-muon final state. We use two data sets, comprising 41.5 fb −1 and 59.7 fb −1 of proton-proton collisions at $\sqrt{s}$ = 13 TeV, recorded in 2017 and 2018 by the CMS experiment at the CERN LHC. The study of the 2018 data set includes a search for displaced signatures of a new boson within the proper decay length range of 0 < cτ < 100 mm. Our results are combined with a previous CMS result, based on 35.9 fb −1 of proton-proton collisions at $\sqrt{s}$ = 13 TeV collected in 2016. No significant deviation from the expected background is observed. Results are presented in terms of a model-independent upper limit on the product of cross section, branching fraction, and acceptance. The findings are interpreted across various benchmark models, such as an axion-like particle model, a vector portal model, the next-to-minimal supersymmetric standard model, and a dark supersymmetric scenario, including those predicting a non-negligible proper decay length of the new boson. In all considered scenarios, substantial portions of the parameter space are excluded, expanding upon prior results.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

The magnificent ACT of flavor-specific neutrino self-interaction

Here we revisit the cosmology of neutrino self-interaction and use the latest cosmic microwave background data from the Atacama Cosmology Telescope (ACT) and the Planck experiment to constrain the interaction strength. In both flavor-universal and nonuniversal coupling scenarios, we find that the ACT data prefers strong neutrino self-interaction that delays neutrino free streaming until just before the matter-radiation equality. When combined with the Planck 2018 data, the preference for strong interaction decreases due to the Planck polarization data. For the combined dataset, the flavor-specific interaction still provides a better fit to the CMB data than ΛCDM. This trend persists even when neutrino mass is taken into account and extra radiation is added. We also study the prospect of constraining such strong interaction by future terrestrial and space telescopes, and find that the upcoming CMB-S4 experiment will improve the upper limit on neutrino self-interaction by about a factor of three.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Data from: "Snowmelt Timing Regulates Community Composition, Phenology, and Physiological Performance of Alpine Plants"

This archive contains data that were used to support conclusions drawn in “Snowmelt Timing Regulates Community Composition, Phenology, and Physiological Performance of Alpine Plants”, by Winkler et al., 2018. Data were collected throughout the 2009 growing season on Niwot Ridge, Colorado, before the site became part of the Alpine Treeline Warming Experiment (ATWE). Geospatial files are included in this archive to provide additional locational context. The files in this data package consist of five comma-separated-values (.csv) files, one keyhole markup language (.kml) file, and two ESRI shapefiles (.shp). The .csv files can be opened by Microsoft Excel, R, or any simple text-editor software, such as TextEdit (MacOS) or Notepad (Windows). The .kml files can be opened by Google Maps or Google Earth, and the .shp files are compatible with GIS softwares such as ESRI’s ArcGIS suite, and QGIS.------------------------------------------------------------------------------------------------------------------------------------------------------------------------------We asked how plant community composition, phenology, plant water relations, and photosynthetic gas exchange of alpine-restricted and wide-ranging species differ in their responses to a ca. 40-day snowmelt gradient in the Colorado Rocky mountains (Lewisia pygmaea, Sibbaldia procumbens, and Hymenoxys grandiflora were alpine-restricted and Artemisia scopulorum, Carex rupestris, and Geum rossii were wide-ranging species). To do this, we measured percent cover and flowering initiation across 20 plots varying in snowmelt timing and measured net photosynthesis and stomatal conductance in multiple individuals of each target species in these plots in 2009.As hypothesized, species richness and foliar cover increased with earlier snowmelt, due to a greater abundance of wide-ranging species present in earlier melting plots. Flowering initiation occurred earlier with earlier snowmelt for 12 out of 19 species analyzed, while flowering duration was shortened with later snowmelt for six species (all but one were wide ranging species). We observed >50% declines in net photosynthesis from July to September as soil moisture and plant water potentials declined. Early-season stomatal conductance was higher in wide-ranging species, indicating a more competitive strategy for water acquisition when soil moisture is high. Even so, there were no associated differences in photosynthesis or transpiration, suggesting no strong differences between these groups in physiology.

54 ENVIRONMENTAL SCIENCES↗

Observation of the ${K}^{+}\to {\pi}^{+}\nu \overline{\nu}$ decay and measurement of its branching ratio

A measurement of the ${K}^{+}\to {\pi}^{+}\nu \overline{\nu}$ decay by the NA62 experiment at the CERN SPS is presented, using data collected in 2021 and 2022. This dataset was recorded, after modifications to the beamline and detectors, at a higher instantaneous beam intensity with respect to the 2016–2018 data taking. Combining NA62 data collected in 2016–2022, a measurement $\mathcal{B} ({K}^{+}\to {\pi}^{+}\nu \overline{\nu}) = \large{(}13.0^{+3.3}_{-3.0}\large{)}$ x $10^{-11}$ of is reported. With 51 signal candidates observed and an expected background of $18^{+3}_{-2}$ events, $\mathcal{B} ({K}^{+}\to {\pi}^{+}\nu \overline{\nu})$ becomes the smallest branching ratio measured with a signal significance above 5σ.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗