Functional and structural characterization of AntR, an Sb(III) responsive transcriptional repressor
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ABSTRACT Muscle is highly organized across multiple length scales. Consequently, small changes in the arrangement of myofilaments can influence macroscopic mechanical function. Two leg muscles of a cockroach have identical innervation, mass, twitch responses, length–tension curves and force–velocity relationships. However, during running, one muscle is dissipative (a ‘brake’), while the other dissipates and produces significant positive mechanical work (bifunctional). Using time-resolved X-ray diffraction in intact, contracting muscle, we simultaneously measured the myofilament lattice spacing, packing structure and macroscopic force production of these muscles to test whether structural differences in the myofilament lattice might correspond to the muscles' different mechanical functions. While the packing patterns are the same, one muscle has 1 nm smaller lattice spacing at rest. Under isometric stimulation, the difference in lattice spacing disappeared, consistent with the two muscles' identical steady-state behavior. During periodic contractions, one muscle undergoes a 1 nm greater change in lattice spacing, which correlates with force. This is the first identified structural feature in the myofilament lattice of these two muscles that shares their whole-muscle dynamic differences and quasi-static similarities.
A primary goal of HIV-1 vaccine development is the consistent elicitation of protective, neutralizing antibodies. While highly similar neutralizing antibodies (nAbs) have been isolated from multiple HIV-infected individuals, it is unclear whether vaccination can consistently elicit highly similar nAbs in genetically diverse primates. Here, we show in three outbred rhesus macaques that immunization with Env elicits a genotypically and phenotypically conserved nAb response. From these vaccinated macaques, we isolated four antibody lineages that had commonalities in immunoglobulin variable, diversity, and joining gene segment usage. Atomic-level structures of the antigen binding fragments of the two most similar antibodies showed nearly identical paratopes. The Env binding modes of each of the four vaccine-induced nAbs were distinct from previously known monoclonal HIV-1 neutralizing antibodies, but were nearly identical to each other. The similarities of these antibodies show that the immune system in outbred primates can respond to HIV-1 Env vaccination with a similar structural and genotypic solution for recognizing a particular neutralizing epitope. These results support rational vaccine design for HIV-1 that aims to reproducibly elicit, in genetically diverse primates, nAbs with specific paratope structures capable of binding conserved epitopes.
In this work, a new direct UV curing, polyurethane-like, highly stretchable rubber, Elastic ToughRubber 90™ (ETR 90), is demonstrated for 3D printing via photocuring with Texas Instruments DLP® optical systems. An array of test specimens, comprising a sandwich structure with a body-centered cubic lattice core, are 3D printed from ETR 90. The compressive behavior of these specimens is characterized up to 10 k and up to 100 k fatigue-loading cycles. The internal, visually obstructed, structures under loads are visualized using in situ X-ray tomography. All lattice structures remain intact and full recovery is observed, indicating the cyclic durability of the 3D-printed rubber.
In 2012, Congress passed P.L. 112-149, Insular Areas Act of 2011, which amended the Compact of Free Association Amendments Act of 2003 by assigning Cactus Crater containment monitoring and reporting requirements to the Secretary of Energy (Secretary). Effective January 1, 2012, the Secretary was required to “periodically (but not less frequently than every 4 years) conduct -- (I) a visual study of the concrete exterior of the Cactus Crater Containment Structure on Runit Island; and (II) a radiochemical analysis of the groundwater surrounding and in the Cactus Crater Containment Structure on Runit Island.” 48 U.S.C. 1921b(f)(1)(B)(i). The Secretary was also directed to submit to Congress a report describing the results of each visual survey and the radiochemical analysis and “a determination on whether the surveys and analyses indicate any significant change in the health risks to the people of Enewetak from the contaminants within the Cactus Crater Containment Structure.” 48 U.S.C. 1921b(f)(1)(B)(ii)(II).
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Physical characteristics of large skeletal frameworks for space applications are investigated by analyzing one concept: the tetrahedral truss, which is idealized as a sandwich plate with isotropic faces. Appropriate analytical relations are presented in terms of the truss column element properties which for calculations were taken as slender graphite/epoxy tubes. Column loads, resulting from gravity gradient control and orbital transfer, are found to be small for the class structure investigated. Fundamental frequencies of large truss structures are shown to be an order of magnitude lower than large earth based structures. Permissible loads are shown to result in small lateral deflections of the truss due to low-strain at Euler buckling of the slender graphite/epoxy truss column elements. Lateral thermal deflections are found to be a fraction of the truss depth using graphite/epoxy columns.
The interaction between a turbulent flow and certain types of structures which respond to its excitation is investigated. One-dimensional models were used to develop the basic ideas applied to a second model resembling the fuselage construction of an aircraft. In the two-dimensional case a simple membrane, with a small random variation in the membrane tension, was used. A decaying turbulence was constructed by superposing infinitely many components, each of which is convected as a frozen pattern at a different velocity. Structure-turbulence interaction results are presented in terms of the spectral densities of the structural response and the perturbation Reynolds stress in the fluid at the vicinity of the interface.
The paper considers critical currents in A-15 structure Nb3Al converted from a cold-worked bcc structure. Nb3Al prepared in the ductile phase by quenching and mechanical working followed by conversion to the A-15 structure could carry currents above 10 to the 9th power A/sq m in fields near 20 T. These critical currents are comparable to those of Nb3Ge and V3Ga which are closest competing materials for use in high fields; further enhancement of the critical current is possible if thermal treatments are optimized.
A description of an integrated finite element (FE) thermal-structural approach for accurate and efficient modeling of large space structures is presented. A geometric model with a common discretization for all analyses is employed. It uses improved thermal elements and the results from the thermal analysis directly in the structural analysis without any intervening data processing. The differences between the conventional FE approach as implemented in large programs and an integrated FE approach currently under development are described. Considerations for thermal modeling of truss members is discussed and three thermal truss finite elements are presented. The performance of these elements was evaluated for typical truss members neglecting joint effects. A simple truss with metallic joints and composite members was studied to evaluate the effectiveness of the approach for realistic truss designs. A study of the effects of aluminum joints on the thermal deformations of a simple, plane truss with composite members showed that joint effects may be significant. Further study is needed to assess the role of joint effects on the deformation of large trusses.
The NASA Aircraft Energy Efficiency (ACEE) Composite Primary Aircraft Structures Program was designed to develop technology for advanced composites in commercial aircraft. Research on composite materials, aircraft structures, and aircraft design is presented herein. The following parameters of composite materials were addressed: residual strength, damage tolerance, toughness, tensile strength, impact resistance, buckling, and noise transmission within composite materials structures.
A simple energy approach to study the problem of control structure interactions in large space structures is presented. For the illustrative cases of free-free beam and free rectangular plate, the vibrational energy imparted during operation of constant and pulsed thrusters is found in a nondimensional form. Then based on a parametric study, suggestions are made on the choice of the thruster location and parameters to minimize the control structure interactions.
The Computational Structural Mechanics (CSM) activity is developing advanced structural analysis and computational methods that exploit high-performance computers. Methods are developed in the framework of the CSM testbed software system and applied to representative complex structural analysis problems from the aerospace industry. An overview of the CSM testbed methods development environment is presented and some numerical methods developed on a CRAY-2 are described. Selected application studies performed on the NAS CRAY-2 are also summarized.
The Computational Structural Mechanics (CSM) program at Lewis encompasses: (1) fundamental aspects for formulating and solving structural mechanics problems, and (2) development of integrated software systems to computationally simulate the performance/durability/life of engine structures.
The progress made in resolving the computational issues associated with modeling high temperature and pressure viscous flows in advanced propulsion systems is documented. An overview of adaptive computational methods for various classes of fluid-structure interaction problems is presented. The key features associated with several approaches are outlined and the advantages/disadvantages of each are summarized. A mathematical formulation is presented for general fluid-structure interaction problems with a moving domain. The two adaptive approaches are discussed used in solving the benchmark problems. The first scheme is a user interactive scheme which is quite versatile and easy to implement but requires an excessive amount of monitoring by the operator and is computationally inefficient. The second method is a new, local remeshing method for handling a general class of fluid-structure interaction problems. This method couples many of the attractive features of other approaches into a computationally efficient and versatile method. The results obtained for two test cases are presented. Results from both the user interactive and local remeshing procedure are described. The current status of the project and future goals to be completed are summarized.
In the past few years there has been substantial interest in the integrated design of large space structures and their vibration control systems. This paper overviews two aspects of integrated control-structure design. The first is the calculation of derivatives of control system stability margins with respect to structural parameters, and the effect of modal truncation on the accuracy of these derivatives. The second aspect is the various formulations used to define an integrated design optimization problem.
Energy methods are used to formulate steady-state thermal elements which are compatible with structural beam and plate elements. Comparisons of energy method results with finite element results indicate that the energy methods achieve similar accuracy with fewer degrees of freedom. Limitations of energy methods with regard to discontinuous functions and computational overflow are noted. Thermal stress calculations are simplified by the use of similar formulations for the thermal and structural elements. The advantages that these energy-based elements offer to high-temperature structural optimization are discussed.
The effects of sensor/actuator design and modeling decisions on the zero frequencies of single input single output structural systems are explored. A zero definition based on the high gain closed loop character of the poles of a system is used to study parametrically zeroes as a function of sensor and actuator location. An infinite order model is adopted so that the effects of finite order modeling are removed. Examples focus on point or localized actuators and sensors and simple uniform structures. The sensitivity of the zero frequencies to changes in the sensor and actuator location for both collocated and non-collocated cases are presented. Non-minimum phase behavior is visible in only certain non-collocated situations. In addition to the sensor/actuator attributes, the zeroes are shown to be a function of the truncation and discretization used to model the structural response for collocated and dual systems. Methods for improving the zero predictions in the control bandwidth are suggested.