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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 343 records · Page 19
All sourcesNASA NTRSDOE OSTI
NASA NTRS1995

The AAMP5/AAMP-FV project

This presentation describes a project, formal verification of the microcode in the AAMP5 microprocessor, conducted to explore how formal techniques for specification and verification could be introduced into an industrial process. Sponsored by the Systems Validation Branch of NASA Langley and by Collins Commercial Avionics, a division of Rockwell International, it was conducted by Collins and the SRI International Computer Science Laboratory. The project consisted of specifying in the PVS language developed by SRI a portion of a Rockwell proprietary microprocessor, the AAMP5, at both the instruction set and register-transfer levels and using the PVS theorem prover to prove the microcode correct for a representative subset of instructions. While this presentation includes a brief technical overview, its emphasis is on the lessons learned in using PVS for an example of this size and the implications for using formal methods in an industrial setting. The central result of this project was to demonstrate the feasibility of formally specifying a commercial microprocessor and the use of mechanical proofs of correctness to verify microcode. This is particularly significant since the AAMP5 was not designed for formal verification, but to provide a more than three fold performance improvement, by pipelining instruction execution, while remaining object code compatible with the earlier AAMP2. As a consequence, the AAMP5 is one of the most complex microprocessors to which formal methods have been applied. Another key result was the discovery of both actual and seeded errors. Two actual microcode errors were discovered and corrected during development of the formal specification, illustrating the value of simply creating a precise specification. Two seeded errors were systematically uncovered while doing correctness proofs. One of these was an actual error that had been discovered after first fabrication but left in the microcode provided to SRI. The other error was designed to be unlikely to be detected by walkthroughs, testing, or simulation. Several other results emerged during the project, including the ease with which practicing engineers became comfortable with PVS, the need for libraries of general purpose theories, the usefulness of formal specification in revealing errors, the natural fit between formal specification and inspections, the difficulty of selecting the best style of specification for a new problem domain, the high level of assurance provided by proofs of correctness, and the need to engineer proof strategies for reuse.

Miller, Steven P.↗
NASA NTRS1996

Concurrent Probabilistic Simulation of High Temperature Composite Structural Response

A computational structural/material analysis and design tool which would meet industry's future demand for expedience and reduced cost is presented. This unique software 'GENOA' is dedicated to parallel and high speed analysis to perform probabilistic evaluation of high temperature composite response of aerospace systems. The development is based on detailed integration and modification of diverse fields of specialized analysis techniques and mathematical models to combine their latest innovative capabilities into a commercially viable software package. The technique is specifically designed to exploit the availability of processors to perform computationally intense probabilistic analysis assessing uncertainties in structural reliability analysis and composite micromechanics. The primary objectives which were achieved in performing the development were: (1) Utilization of the power of parallel processing and static/dynamic load balancing optimization to make the complex simulation of structure, material and processing of high temperature composite affordable; (2) Computational integration and synchronization of probabilistic mathematics, structural/material mechanics and parallel computing; (3) Implementation of an innovative multi-level domain decomposition technique to identify the inherent parallelism, and increasing convergence rates through high- and low-level processor assignment; (4) Creating the framework for Portable Paralleled architecture for the machine independent Multi Instruction Multi Data, (MIMD), Single Instruction Multi Data (SIMD), hybrid and distributed workstation type of computers; and (5) Market evaluation. The results of Phase-2 effort provides a good basis for continuation and warrants Phase-3 government, and industry partnership.

Abdi, Frank↗
DOE OSTI2021

Implementing Arbitrary/Common Concurrent Writes of CRCW PRAM

The Parallel Random Access Machines (PRAM) abstraction is the simplest and most elegant algorithmic model for the design and analysis of parallel algorithms. It consists of different models categorized based on the underlying memory access mode used, the most powerful of which is the Concurrent Read Concurrent Write (CRCW) model. A PRAM algorithm describes a series of rounds, each of which consists of a collection of operations that can be executed concurrently within the same time step. However, the lack of support for concurrent memory accesses and the prevalence of asynchronous programming models led to the belief that implementing CRCW PRAM algorithms is unattainable and prompted many to avoid this model except for theoretical studies of optimal performance.In this work, we study the arbitrary and common concurrent writes in the CRCW PRAM model and explore implementation challenges on general-purpose systems. Moreover, we examine current practices for implementing common/arbitrary concurrent writes and propose a new efficient lightweight and thread-safe method to implement concurrent writes through leveraging atomic instructions. To demonstrate the efficacy of our method, we developed OpenMP kernels for classical CRCW PRAM algorithms and provide experimental results and comparisons based on run time performance measured over the x86 multicore architecture. Our results show a performance speedup compared to current practices up to 4.5x across all our benchmarks.

Ghanim, Fady↗
NASA NTRS1993

The effects of instructional sets on reactions to and performance on an intelligent tutoring system

The effects of a contextual factor, i.e., task instructions, on performance on and reactions to an Intellegent Tutoring System (ITS) training Remote Manipulator System (RMS) tasks were examined. The results supported the first prediction that task instructions could be used to successfully induce a mastery versus an achievement orientation. Previous research suggests that a mastery orientation can result in beneficial effects on learning and performance of complex tasks. Furthermore, the results supported the second prediction that a mastery orientation would have beneficial effects on learning and performance as well as affective and cognitive reactions to the ITS tasks. Moreover, the results indicated that a mastery orientation was especially beneficial for the more complex ITS tasks and later in task practice, i.e., when a task was performed for the second time. A mastery orientation is posited to have its beneficial effects by focusing more effort and attention on task performance. Conclusions are drawn with some caution due to the small number of subjects, although the results for these subjects were consistent across multiple trials and multiple measures of performance. ITS designers are urged to consider contextual factors such as task instructions and feedback in terms of their potential to induce a mastery versus an achievement orientation.

Johnson, Debra Steele↗
NASA NTRS2006

Processing EOS MLS Level-2 Data

A computer program performs level-2 processing of thermal-microwave-radiance data from observations of the limb of the Earth by the Earth Observing System (EOS) Microwave Limb Sounder (MLS). The purpose of the processing is to estimate the composition and temperature of the atmosphere versus altitude from .8 to .90 km. "Level-2" as used here is a specialists f term signifying both vertical profiles of geophysical parameters along the measurement track of the instrument and processing performed by this or other software to generate such profiles. Designed to be flexible, the program is controlled via a configuration file that defines all aspects of processing, including contents of state and measurement vectors, configurations of forward models, measurement and calibration data to be read, and the manner of inverting the models to obtain the desired estimates. The program can operate in a parallel form in which one instance of the program acts a master, coordinating the work of multiple slave instances on a cluster of computers, each slave operating on a portion of the data. Optionally, the configuration file can be made to instruct the software to produce files of simulated radiances based on state vectors formed from sets of geophysical data-product files taken as input.

Snyder, W. Van↗
NASA NTRS2003

Working and Learning with Knowledge in the Lobes of a Humanoid's Mind

Humanoid class robots must have sufficient dexterity to assist people and work in an environment designed for human comfort and productivity. This dexterity, in particular the ability to use tools, requires a cognitive understanding of self and the world that exceeds contemporary robotics. Our hypothesis is that the sense-think-act paradigm that has proven so successful for autonomous robots is missing one or more key elements that will be needed for humanoids to meet their full potential as autonomous human assistants. This key ingredient is knowledge. The presented work includes experiments conducted on the Robonaut system, a NASA and the Defense Advanced research Projects Agency (DARPA) joint project, and includes collaborative efforts with a DARPA Mobile Autonomous Robot Software technical program team of researchers at NASA, MIT, USC, NRL, UMass and Vanderbilt. The paper reports on results in the areas of human-robot interaction (human tracking, gesture recognition, natural language, supervised control), perception (stereo vision, object identification, object pose estimation), autonomous grasping (tactile sensing, grasp reflex, grasp stability) and learning (human instruction, task level sequences, and sensorimotor association).

Ambrose, Robert↗
NASA NTRSDate not supplied

m:N ConOps/R&R Remote Simulation

This presentation details the experimental design of an investigation of small unmanned aircraft system (sUAS) operations involving multiple vehicle management by a remote operator. The study is part of an ongoing effort to explore multiple vehicle control by multiple operators, i.e., the control of N vehicles by m operators (m:N operations). For this effort, NASA and collaborators have developed prototypes of a concept of operations (ConOps), roles and responsibilities (R&R) for operators and supervisors, and a ground control station (GCS), including software displays and interfaces. Participants in this study acted as the pilot-in-command of twelve aircraft flying pre-approved routes in a simulation of a food delivery operation utilizing sUAS in the San Diego, CA area. Each participant experienced four experimental trials. Twice within the course of each trial, participants were responsible for responding to a sudden, unanticipated, and high-priority contingency: an airspace restriction for sUAS operations known as a UAS Volume Reservation (UVR). Upon issuance of a UVR, pilots were expected to reroute affected vehicles around the airspace. The level of automation (LoA) and workload of the flight rerouting task were varied. The LoA was manipulated by providing reroute suggestions ("auto" condition) for aircraft or by requiring pilots to manually reroute ("manual" condition) affected vehicles. Workload was varied as a function of the number of vehicles affected by the UVR contingencies: 2 vehicles ("low workload" condition) versus 4 vehicles ("high workload" condition). Additionally, some vehicles required pilots to adjust for terrain conflicts while avoiding the UVR region. Due to the COVID-19 pandemic, in-person data collection for this study was not possible. Researchers adapted to this circumstance through the development of remote data collection protocol. Participants were able to view adapted GCS displays using the Microsoft Teams teleconferencing platform and responded to events by using a verbal protocol developed for the experiment. Using this protocol, participants provided instructions for actions to a researcher, referred to as the surrogate, to carry out on their behalf. This presentation describes the experiment design, including special details for remote data collection via a subject-surrogate configuration, and concludes with planned data analysis and results to be presented at a later date.

multi-UAS↗
NASA NTRS1984

Report of the Panel on Propulsion

Propulsion, while conventionally included on the list of important aeronautical disciplines along with aerodynamics, structures, etc., is in itself a systems endeavor, analogous to the engineering of the entire vehicle; indeed propulsion encompasses important aspects of all the other disciplines. In recognition of this fact, the panel focused its discussion on those aspects of the key disciplines that are especially or uniquely important to propulsion. From the initial development of the airplane, the propulsion system has been recognized as one of the pacing technologies. It is perhaps because of the technological disparity between the reciprocating engine and the primitive airframe that the two remained relatively and separate, were developed somewhat independently, usually by different organizations. In recent years, the maturing of the gas turbine power plant and the advance in high-speed airframes have rendered this separation somewhat artificial. The power plant and the airframe now share common structural and aerodynamic elements; as the flight Mach number rises, the degree of interaction increases. By the year 2000, this interdependence will have increased in many respects to a point where independent design may not be practical or possible. During the period since the initiation of the aircraft gas turbine, the solid propellant rocket and the liquid propellant rocket, a vast array of other novel engines have been studied, covering the full spectrum of flight conditions from low subsonic to hypersonic and transatmospheric flight. In each instance, performance limits have been investigated under the assumption that current technology or reasonably foreseeable technology would be available for their development. Among the extensive list of advanced, high-performance concepts and cycles examined are the hypersonic ramjet, the variable cycle, runway-to-orbit airbreathing engine, the ram rocket (airbreathing and rich solid propellant rocket), and the air turborocket. At various times, these systems have come relatively close to meriting development and application. In many instances, limitations of materials and technologies curtailed development. As important and with almost equal frequency, the lack of commercial or military utility of the concept precluded the necessary funding. It is instructive to note that two former items on this list, the turbofan (bypass engine) and the high-speed turboprop, are respectively a mainstay engine and a promising development. In the case of the turbofan, its full potential could not be realized until turbine cooling technology had been developed and new materials developed to permit the construction of transonic fans. In the case of the highspeed turbopropeller engine, not only were the material and turbine technologies needed, but, in addition, the rise in fuel costs provided the impetus to take advantage of its favorable fuel consumption characteristic. As the basic technologies progress and as new missions become attractive, the engines in the foregoing list become candidates for new feasibility studies and further technology development. At the present time, the ram rocket is the prime contender to augment the range of small missiles. Of interest also is the hypersonic ram jet and its logical extension, the runway-to-orbit airbreathing engine. Much of this report deals with the development of current or near-future power plant concepts. First, the motivating factors for aeronautical propulsion research are reviewed as a reminder of the importance of continued effort in a field that has often been characterized as mature. Next, technical areas are discussed in which the panel feels additional research effort is warranted and would lead to the realization of the technological potentials between now and the year 2000. Under these guidelines, new cycles (e.g., isothermal energy exchange) were not considered by the panel. Finally, although facility requirements were not a prime consideration in the current projections, the panel believes that the increasing complexity of propulsion systems; the need for more refined interaction between propulsion system, airframe, and controls; and increasing operation in adverse weather will require test capabilities beyond those now available (see appendix). Enhanced test capability is needed in the areas of propulsion airframe integration and in largescale icing research with proper concurrent treatment of altitude, temperature, and speed.

Kerrebrock, Jack L.↗
DOE OSTI2025

Co-designing Spectral Transformation Oracles with Hybrid Oscillator-Qubit Quantum Processors: From Algorithms to Compilation

We co-design a family of quantum eigenvalue transformation oracles that can be efficiently implemented on hybrid discrete- or continuous-variable (qubit or qumode) hardware. To illustrate the oracle’s representation-theoretic power and near-term experimental accessibility, we encode a Gaussian imaginary time-evolution spectral filter. As a result, we define a continuous linear combination of unitaries block encoding. Due to the ancillary qumode’s infinite-dimensional nature, continuous-variable qumodes constitute a powerful compilation tool for encoding continuous spectral functions without discretization errors while minimizing resource requirements. We then focus on the ubiquitous task of preparing eigenstates in quantum spin models. For completeness, we provide an end-to-end compilation which expresses high-level oracles in terms of an experimentally realizable instruction set architecture in both 1D and 2D. Finally, we examine the leading-order effects of physical errors and highlight open research directions. Our algorithms scale linearly with the spatial extent of the target system and are applicable to both near-term and large-scale quantum processors.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
NASA NTRS2011

U.S. Spacesuit Knowledge Capture Status and Initiatives

The National Aeronautics and Space Administration (NASA), other organizations and individuals have been performing United States (U.S.) spacesuit knowledge capture since the beginning of space exploration via publication of reports, conference presentations, specialized seminars, and classes instructed by veterans in the field. Recently, the effort has been more concentrated and formalized whereby a new avenue of spacesuit knowledge capture has been added to the archives through which videotaping occurs, engaging both current and retired specialists in the field presenting technical scope specifically for education and preservation of knowledge or being interviewed to archive their significance to NASA s history. Now with video archiving, all these avenues of learning are brought to life with the real experts presenting their wealth of knowledge on screen for future learners to enjoy. U.S. spacesuit knowledge capture topics have included lessons learned in spacesuit technology, experience from the Gemini, Apollo, Skylab and Shuttle programs, hardware certification, design, development and other program components, spacesuit evolution and experience, failure analysis and resolution, aspects of program management, and personal interviews. These archives of actual spacesuit legacy now reflect its rich history and will provide a wealth of knowledge which will greatly enhance the chances for the success of future and more ambitious spacesuit system programs. In this paper, NASA s formal spacesuit knowledge capture efforts will be reviewed and a status will be provided to reveal initiatives and accomplishments since the inception of the more formal U.S. spacesuit knowledge program. A detail itemization of the actual archives will be addressed along with topics that are now available to the general NASA community and the public. Additionally, the latest developments in the archival relationship with the Smithsonian will be discussed.

Chullen, Cinda↗
NASA NTRS2012

U.S. Spacesuit Knowledge Capture Status and Initiatives

The National Aeronautics and Space Administration (NASA), other organizations and individuals have been performing United States (U.S.) spacesuit knowledge capture since the beginning of space exploration via publication of reports, conference presentations, specialized seminars, and classes instructed by veterans in the field. Recently, the effort has been more concentrated and formalized whereby a new avenue of spacesuit knowledge capture has been added to the archives through which videotaping occurs, engaging both current and retired specialists in the field presenting technical scope specifically for education and preservation of knowledge or being interviewed to archive their significance to NASA's history. Now with video archiving, all these avenues of learning are brought to life with the real experts presenting their wealth of knowledge on screen for future learners to enjoy. U.S. spacesuit knowledge capture topics have included lessons learned in spacesuit technology, experience from the Gemini, Apollo, Skylab and Shuttle programs, hardware certification, design, development and other program components, spacesuit evolution and experience, failure analysis and resolution, aspects of program management, and personal interviews. These archives of actual spacesuit legacy now reflect its rich history and will provide a wealth of knowledge which will greatly enhance the chances for the success of future and more ambitious spacesuit system programs. In this paper, NASA s formal spacesuit knowledge capture efforts will be reviewed and a status will be provided to reveal initiatives and accomplishments since the inception of the more formal U.S. spacesuit knowledge program. A detail itemization of the actual archives will be addressed along with topics that are now available to the general NASA community and the public. Additionally, the latest developments in the archival relationship with the Smithsonian will be discussed.

Chullen, Cinda↗
NASA NTRS1994

Interactive orbital proximity operations planning system instruction and training guide

This guide instructs users in the operation of a Proximity Operations Planning System. This system uses an interactive graphical method for planning fuel-efficient rendezvous trajectories in the multi-spacecraft environment of the space station and allows the operator to compose a multi-burn transfer trajectory between orbit initial chaser and target trajectories. The available task time (window) of the mission is predetermined and the maneuver is subject to various operational constraints, such as departure, arrival, spatial, plume impingement, and en route passage constraints. The maneuvers are described in terms of the relative motion experienced in a space station centered coordinate system. Both in-orbital plane as well as out-of-orbital plane maneuvering is considered. A number of visual optimization aids are used for assisting the operator in reaching fuel-efficient solutions. These optimization aids are based on the Primer Vector theory. The visual feedback of trajectory shapes, operational constraints, and optimization functions, provided by user-transparent and continuously active background computations, allows the operator to make fast, iterative design changes that rapidly converge to fuel-efficient solutions. The planning tool is an example of operator-assisted optimization of nonlinear cost functions.

Grunwald, Arthur J.↗
DOE OSTI2021

On the Limits of EM Based Detection of Control Logic Injection Attacks In Noisy Environments

The difficulty in applying traditional security mechanisms in Industrial Control System (ICS) environments makes a large portion of these mission-critical assets vulnerable to cyber attacks. Therefore, there is a dire need for the development of novel security mechanisms specifically designed to protect such critical systems. Recently a lot of attention has been given to mechanisms that exploit the EM emanations of devices for defense purposes. Such practices may lead to the development of robust external and non-intrusive anomaly detection systems. Nevertheless, the majority of current work in the area neglects to consider the implications of real-life environments, particularly environmental noise. In this work, we explore the limits of EM-based anomaly detection towards identifying injection attacks in control logic software in noisy environments. Our study conducted upon both synthetically generated and real signals identified that indeed environmental noise might significantly degrade the accuracy of the anomaly detection process. Experiments done upon synthetic data indicated that assuming that signals are captured with high sampling rates, even minor code injections can be detected with above-90% accuracy in noisy environments where SNR is up to -2dB. This is true even if naive detection methods are considered. Moreover, experiments done using a real-life testbed attest that even single-instruction injections can be detected with near-perfect accuracy in relatively clean environments. Finally, noise-elimination techniques can drastically improve the reliability of the detection mechanism even in noisy environments.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

Developmental assembly of multi-component polymer systems through interconnected synthetic gene networks in vitro

Abstract Living cells regulate the dynamics of developmental events through interconnected signaling systems that activate and deactivate inert precursors. This suggests that similarly, synthetic biomaterials could be designed to develop over time by using chemical reaction networks to regulate the availability of assembling components. Here we demonstrate how the sequential activation or deactivation of distinct DNA building blocks can be modularly coordinated to form distinct populations of self-assembling polymers using a transcriptional signaling cascade of synthetic genes. Our building blocks are DNA tiles that polymerize into nanotubes, and whose assembly can be controlled by RNA molecules produced by synthetic genes that target the tile interaction domains. To achieve different RNA production rates, we use a strategy based on promoter “nicking” and strand displacement. By changing the way the genes are cascaded and the RNA levels, we demonstrate that we can obtain spatially and temporally different outcomes in nanotube assembly, including random DNA polymers, block polymers, and as well as distinct autonomous formation and dissolution of distinct polymer populations. Our work demonstrates a way to construct autonomous supramolecular materials whose properties depend on the timing of molecular instructions for self-assembly, and can be immediately extended to a variety of other nucleic acid circuits and assemblies.

Science & Technology - Other Topics↗
NASA NTRS1994

Beware of agents when flying aircraft: Basic principles behind a generic methodology for the evaluation and certification of advanced aviation systems

There is currently a growing interest in the aeronautical community to assess the effects of the increasing levels of automation on pilots' performance and overall safety. The first effect of automation is the change in the nature of the pilot's role on the flight deck. Pilots have become supervisors who monitor aircraft systems in usual situations and intervene only when unanticipated events occur. Instead of 'hand flying' the airplane, pilots contribute to the control of aircraft by acting as mediators, instructions given to the automation. By eliminating the need for manually controlling normal situations, such a role division has reduced the opportunities for the pilot to acquire experience and skills necessary to safely cope with abnormal events. Difficulties in assessing the state and behavior of automation arise mainly from four factors: (1) the complexity of current systems and consequence mode-related problems; (2) the intrinsic autonomy of automation which is able to fire mode transitions without explicit commands from the pilots; (3) the bad quality of feed-back from the control systems displays and interfaces to the pilots; and (4) the fact that the automation currently has no explicit representation of the current pilots' intentions and strategy. Assuming certification has among its major goals to guarantee the passengers' and pilots' safety and the airplane integrity under normal and abnormal operational conditions, the authors suggest it would be particularly fruitful to come up with a conceptual reference system providing the certification authorities both with a theoretical framework and a list of principles usable for assessing the quality of the equipment and designs under examination. This is precisely the scope of this paper. However, the authors recognize that the conceptual presented is still under development and would thus be best considered as a source of reflection for the design, evaluation and certification processes of advanced aviation technologies.

Javaux, Denis↗
NASA NTRS2019

Near-Term Options for a Nuclear Thermal Propulsion Flight Demonstrator

The Appropriations Bill passed by the US Congress in February 2019 instructed NASA to direct “not less than $100,000,000 for the development of nuclear thermal propulsion, of which not less than $70,000,000 shall be for the design of a flight demonstration by 2024 for which a multi-year plan is required by both the House and the Senate within 180 days of enactment of this agreement." As part of NASA’s response to this direction, the Advanced Concepts Office (ACO) at the Marshall Space Flight Center (MSFC) was tasked with leading a study to develop a nuclear thermal propulsion (NTP) flight demonstration (FD) concept and evaluate its feasibility with respect to the near-term schedule goal. During formulation for the NTP FD study, two perspectives emerged with regards to FD concept design. The first seeks to strictly observe the immediate near-term schedule goal, embracing a completely “off-the-shelf,” high-TRL approach to subsystem design and component selection. The downside to this approach is that the propulsion performance to be expected from such a design is significantly lower than what NTP promises for operational systems, and the value of the flight demo is potentially reduced due to a lack of traceability. The second approach advocates for an FD concept that shows increased traceability to the projected designs of operational systems, providing risk reduction for future NTP-enabled missions. This option comes at the cost of schedule and development risks, as it requires some new investments in nuclear reactor fuels and design. In order to understand the implications and differences between these two approaches, the ACO team elected to perform a concept design of each type, labeling the immediate near-term concept Flight Demo 1 (FD1), and the higher traceability concept Flight Demo 2 (FD2). This paper will present a summary of the mission profiles and system designs for both FD1 and FD2, identifying key drivers and challenges for each design.

Edwards, S. J.↗
DOE OSTI2024

Geometry-complete perceptron networks for 3D molecular graphs

Abstract Motivation The field of geometric deep learning has recently had a profound impact on several scientific domains such as protein structure prediction and design, leading to methodological advancements within and outside of the realm of traditional machine learning. Within this spirit, in this work, we introduce GCPNet, a new chirality-aware SE(3)-equivariant graph neural network designed for representation learning of 3D biomolecular graphs. We show that GCPNet, unlike previous representation learning methods for 3D biomolecules, is widely applicable to a variety of invariant or equivariant node-level, edge-level, and graph-level tasks on biomolecular structures while being able to (1) learn important chiral properties of 3D molecules and (2) detect external force fields. Results Across four distinct molecular-geometric tasks, we demonstrate that GCPNet’s predictions (1) for protein–ligand binding affinity achieve a statistically significant correlation of 0.608, more than 5%, greater than current state-of-the-art methods; (2) for protein structure ranking achieve statistically significant target-local and dataset-global correlations of 0.616 and 0.871, respectively; (3) for Newtownian many-body systems modeling achieve a task-averaged mean squared error less than 0.01, more than 15% better than current methods; and (4) for molecular chirality recognition achieve a state-of-the-art prediction accuracy of 98.7%, better than any other machine learning method to date. Availability and implementation The source code, data, and instructions to train new models or reproduce our results are freely available at https://github.com/BioinfoMachineLearning/GCPNet.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRSDate not supplied

Enabling Model Organism and Commercial Astronaut Data Access Through the NASA Open Science Data Repository

NASA’s Open Science Data Repository (OSDR) brings together omics data from NASA’s GeneLab project and non-omics data, including physiological, phenotypic, imaging, and behavioral data from NASA’s Ames Life Sciences Data Archive (ALSDA) collected from decades of space biology research, providing open and FAIR (findable, accessible, interoperable, and reusable) access of these precious data to scientists world-wide. This rich source of meticulously curated metadata and data from spaceflight and analog studies has been mined by the scientific community resulting in dozens of high impact scientific publications that reveals a complex network of molecular and physiological effects of spaceflight across living systems, from microbes to plants, to mammals. Understanding how these effects translate to the human condition is critical as we move deeper into the era of commercial space travel. However, the integration of data, specifically omics data, from astronauts is particularly challenging due to their sensitive nature. OSDR has risen to this challenge by developing a mechanism to control access to identifiable levels of omics data, such as raw sequence data, while enabling public access to processed, unidentifiable, data and associated metadata that will allow the scientific community to interrogate human astronaut data alongside data from model organisms to begin answering these critical questions. The 2021 SpaceX Inspiration4 (I4) mission collected a comprehensive atlas of biological measurements from four civilian astronauts, providing a wealth of data to characterize the effects of spaceflight on the human body. These data include both non-omics and omics assays such as direct RNA sequencing (RNA-seq), single nuclei ATAC-seq and RNA-seq, metagenomics, proteomics, and comprehensive metabolic and cytokine panels, all of which have been integrated into the OSDR system across no less than 9 studies. Each study has been carefully curated using community-backed OSDR standards for sample and assay level metadata ensuring these data are findable and accessible. In addition to hosting both raw and processed data from the principal investigator team for each assay type, the GeneLab team plans to re-process the I4 omics data using GeneLab’s standard processing pipelines. The GeneLab processed data outputs will allow for comparisons across studies on OSDR and enable visualization of these data through the OSDR data visualization platform thereby enabling data reusability and interoperability. Here we describe the robust privacy and security protocols implemented by OSDR to safeguard sensitive health data from astronauts while facilitating metadata and processed data sharing for research purposes. We further provide a road map for navigating the vast amount of data provided for each I4 study on the OSDR, including experimental design, associated experiments, payloads, and missions, data generation and analysis protocols, and associated scientific articles. Additionally, we illustrate how to interrogate the standardized metadata provided in the sample and assay tables as well as instructions for how to download and access the data. The I4 datasets described here re present the first ever comprehensive collection of commercial astronaut data.

Amanda M Saravia-Butler↗