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NASA NTRSDate not supplied

Assessments of Physiology And Cognition in Hybrid-reality Environments (APACHE) – Physical Workload Approximation

The Human Physiology, Performance, Protection & Operations Laboratory (H-3PO) at NASA Johnson Space Center (JSC) is developing a hybrid reality exploration surface analog, “Assessments of Physiology and Cognition in Hybrid-reality Environments” (APACHE). The goal of APACHE is to create a planetary extravehicular activity (EVA) simulation environment that provides a representative physical and cognitive workload approximation using a combination of virtual reality (VR), physical reality, and hybrid reality (HR) techniques. To develop and characterize the physical workload approximation within the APACHE environment, a two-part approach was implemented. In part 1, baseline physical work load during ambulation within APACHE was evaluated and compared with that in other planetary EVA analog environments and with existing data sets from Apollo planetary EVAs and reduced gravity testing of prototype planetary spacesuits. For this evaluation, 10 subjects were asked to ambulate in three surface analog environments: a passive treadmill in APACHE, natural terrain in an outdoor field environment, and a standard motorized treadmill. Subjects’ heart rate and metabolic rate (VO2/VCO2) were measured and compared among the different test conditions and existing data sets. Gait parameters were also collected to compare with suited mechanics and to understand the role of gait kinematics in physical workload. In part 2, the aim is to evaluate the addition of a custom weighted body suit to the aforementioned surface analog environments and the ability to titrate the suit configuration to provide the best possible physical workload approximation for simulation of lunar and Martian EVAs.

Alex Baughman↗
NASA NTRSDate not supplied

Assessments of Physiology And Cognition in Hybrid-reality Environments (APACHE) – Physical Workload Approximation

The Human Physiology, Performance, Protection & Operations Laboratory (H-3PO) at NASA Johnson Space Center (JSC) is developing a hybrid reality exploration surface analog, “Assessments of Physiology And Cognition in Hybrid-reality Environments” (APACHE). The goal of APACHE is to create a planetary extravehicular activity (EVA) simulation environment that provides a representative physical and cognitive workload approximation using a combination of virtual reality (VR), physical reality, and hybrid reality (HR) techniques. To develop and characterize the physical workload approximation within the APACHE environment, a two-part approach was implemented. In part 1, baseline physical workload during ambulation within APACHE was evaluated and compared with that in other planetary EVA analog environments and with existing data sets from Apollo planetary EVAs and reduced gravity testing of prototype planetary spacesuits. For this evaluation, 10 subjects were asked to ambulate in three surface analog environments: a passive treadmill in APACHE, natural terrain in an outdoor field environment, and a standard motorized treadmill. Subjects’ heart rate and metabolic rate (VO2/VCO2)were measured and compared among the different test conditions and existing data sets. Gait parameters were also collected to compare with suited mechanics and to understand the role of gait kinematics in physical workload. In part 2, the aim is to evaluate the addition of a custom weighted body suit to the aforementioned surface analog environments and the ability to titrate the suit configuration to provide the best possible physical workload approximation for simulation of lunar and Martian EVAs.

Alexander J Baughman↗
NASA NTRSDate not supplied

Initial Testing the Exploration Extravehicular Mobility Unit (xEMU) in Lunar Environment Simulation at the Neutral Buoyancy Lab (NBL) in 2022

Understanding how to effectively train for Extravehicular Activities (EVAs) for Artemis missions is critical. Tasked by the new Extravehicular Activity and Human Surface Mobility Program(EHP), a team of stakeholders from engineering and flight operations worked together to test the Exploration Extravehicular Mobility (xEMU) in the Neutral Buoyancy Lab(NBL) simulating the lunar environment. The NBL is a pool in which astronauts are typically trained to complete simulated International Space Station (ISS) EVA tasks in a neutral weigh-out. The overall focus for this test series was evaluating how well the NBL could be used as an effective simulated environment for Artemis lunar EVAs. New NBL support hardware was manufactured to support this test series and update the interfaces to be more representative of xEMU hardware such as a new NBL Portable Life Support System(PLSS)mock-up and umbilical, lights and cameras, and display and control unit (DCU).To simulate the 1/6th-gravity (1/6-g) environment, extra weights were added around the suit to create an accurate center of gravity representation. The Partial Gravity Weigh-out Stand (PGWS) predicted where and how much weight would be required for the 1/6th-G simulation and predicted the center of gravity placement. After the weigh-out attempt was completed, the suited participant would complete a set of directed tasks such as kneeling, object pick-up, and walking to evaluate the weigh-out. To create the lunar environment, sand, boulders, and ramps were added to the pool floor. If time allowed after weigh-out was determined acceptable, the flight operations team would direct the suited participants to complete simulated Artemis EVA tasks using flight-like tools and tool cart. The team also evaluated turning out the overhead lights in the NBL for a portion of some of the test runs and using a solar simulator to create amore realistic lunar south pole lighting environment. The test series completed one unmanned test and nine manned tests. With four of the tests, dual xEMU suited operations were completed with subjects in both the small and large xEMU sizes. Overall, the NBL was able to create an acceptable lunar landscape and ability to have two subjects work side by side in pressurized xEMUs which currently cannot be achieved in other test environments. Achieving a stable 1/6th-G lunar weigh-out and clear, consistent dual suit communications was a challenge for this series. Future work is planned to continue to improve this simulation environment.

spacesuit↗
NASA NTRS2022

Going to Extremes: Architecting Holographic Microscopes for Extreme Environments

Bacterial life exists on earth in extreme environments. These are environments described by large temperature excur- sions, large pressure excursions, and large radiation excursions from the nominal conditions near sea level which are largely populated by humans. These extreme locales represent such places as the ocean ice, the briny pools of Death Valley and deep mines, the acidic hot springs of the High Sierra or Yellowstone, or even the clouds of our upper atmosphere. The preponderance of bacterial life in these extreme environments here on earth suggests that bacterial life might likely exist in the extreme environments of our own solar system, such as the icy moons of Europa or Enceladus. Thus, architecting instruments for detect- ing life in these extreme environments on earth builds confidence that we can architect such instruments for flight missions. In this paper, we discuss our experience with designing digital holo- graphic microscope instruments to enable detection of bacteria in several extreme environments. In particular we discuss three different instruments. The first is our field instrument which is a small, portable instrument for examination of remote sites. The second is submersible instrument which enables exploration of deep aquatic environments and is deployed on a ocean-going drone. The third is a balloon-borne instrument to examine the bacterial content of the upper atmosphere. We will provide a review of each instrument and discuss aspects of instrument engineering for each particular application.

Ramirez, Alex↗
NASA NTRSDate not supplied

Initial Testing of the Exploration Extravehicular Mobility Unit (xEMU) in Lunar Environment Simulation at the Neutral Buoyancy Lab (NBL) in 2022

Understanding how to effectively train for Extravehicular Activities (EVAs) for Artemis missions is critical. Tasked by the new Extravehicular Activity and Human Surface Mobility Program(EHP), a team of stakeholders from engineering and flight operations worked together to test the Exploration Extravehicular Mobility (xEMU) in the Neutral Buoyancy Lab(NBL) simulating the lunar environment. The NBL is a pool in which astronauts are typically trained to complete simulated International Space Station (ISS) EVA tasks in a neutral weigh-out. The overall focus for this test series was evaluating how well the NBL could be used as an effective simulated environment for Artemis lunar EVAs. New NBL support hardware was manufactured to support this test series and update the interfaces to be more representative of xEMU hardware such as a new NBL Portable Life Support System(PLSS)mock-up and umbilical, lights and cameras, and display and control unit (DCU).To simulate the 1/6th-gravity (1/6-g) environment, extra weights were added around the suit to create an accurate center of gravity representation. The Partial Gravity Weigh-out Stand (PGWS) predicted where and how much weight would be required for the 1/6th-G simulation and predicted the center of gravity placement. After the weigh-out attempt was completed, the suited participant would complete a set of directed tasks such as kneeling, object pick-up, and walking to evaluate the weigh-out. To create the lunar environment, sand, boulders, and ramps were added to the pool floor. If time allowed after weigh-out was determined acceptable, the flight operations team would direct the suited participants to complete simulated Artemis EVA tasks using flight-like tools and tool cart. The team also evaluated turning out the overhead lights in the NBL for a portion of some of the test runs and using a solar simulator to create amore realistic lunar south pole lighting environment. The test series completed one unmanned test and nine manned tests. With four of the tests, dual xEMU suited operations were completed with subjects in both the small and large xEMU sizes. Overall, the NBL was able to create an acceptable lunar landscape and ability to have two subjects work side by side in pressurized xEMUs which currently cannot be achieved in other test environments. Achieving a stable 1/6th-G lunar weigh-out and clear, consistent dual suit communications was a challenge for this series. Future work is planned to continue to improve this simulation environment.

spacesuit↗
DOE OSTI2016

Fiber Optic Instrumentation in High Temperature Irradiation Environments

The extremely harsh conditions of advanced reactor designs pose serious challenges for nuclear fuels and materials. Traditional instrumentation (thermocouples, strain gauges, etc.) are not well suited for extended operation in such a harsh environment. This work discusses the potential for using fiber optic-based instrumentation in high temperature irradiation experiments. The primary limitation of fiber optic instrumentation in irradiation experiments is signal darkening due to attenuation in the fiber material. A computational model has been developed to predict broadband optical attenuation in fused silica fiber materials as a function of time, temperature, and dose. Preliminary results obtained using this model are shown for one cycle of irradiation in the high flux isotope reactor at various temperatures. An irradiation campaign has been initiated to provide temperature-dependent optical attenuation data at high dose in order to validate the predictive model. Demonstration of the safety and reliability of new and enhanced nuclear fuels and materials is essential for improving the safety and reliability of existing nuclear power plants and for the licensing and operation of advanced nuclear reactor technologies. Experimental validation of fuel performance codes requires high fidelity measurements during instrumented irradiation experiments. Therefore, a clear need exists for sensors of unprecedented accuracy, resolution, time/space/energy spectrum dependence, reduced size, and, perhaps most importantly, performance in harsh environments. The harsh environment during accelerated irradiation testing could include temperatures from 300 deg. C up to 2600 deg. C, and radiation damage levels ranging from 1 to greater than 100 dpa. Optical fiber-based sensors are a promising candidate for instrumentation in high temperature irradiation environments. Optical fibers are small, inexpensive, chemically inert, immune to electromagnetic interference, and made of high temperature radiation-hard materials. The ability to make distributed measurements of temperature or strain using a single inexpensive optical fiber currently exists for non-extreme environments as commercially available technology. Other advanced sensing technologies such as laser ultrasound, borescopes, and laser-induced breakdown spectroscopy use fiber optic light delivery as a critical component of the sensor design. Some potential applications for optical fiber-based sensors in instrumented irradiation experiments include in-situ measurements of thermal conductivity, ultrasonic measurement of elastic constants (with fiber optic delivery of signal for generation and detection of ultrasonic wave), and distributed measurements of temperature and/or strain (i.e., swelling). The primary limitation for the use of optical technologies for harsh environment (e.g., high neutron flux reactor environments) instrumentation is the attenuation of the light signal due to the effects of temperature and/or irradiation. This work summarizes initial efforts towards developing a predictive model of temperature-dependent radiation-induced attenuation in fused silica optical fibers at high dose. If there is adequate transmission in the fibers, fiber optic-based instrumentation could provide highly accurate distributed measurements during instrumented fuel/material irradiation experiments. Preliminary results show attenuation on the order of 5- 10 dB/m in the wavelength range of 750-900 nm at temperatures of 300 deg. C and below after one HFIR cycle (24 days). At higher temperatures (600 and 900 deg. C), the attenuation is reduced below 5 dB/m in the same wavelength range. This amount of attenuation is acceptable for most fiber optic based sensor systems with a dynamic range on the order of 20-50 dB for a reasonable length (1-2 meters) of fiber in the high flux region. Many optical components use a wavelength of 850 nm, which lies in the low attenuation window. In order to refine and ultimately validate the predictive model of optical fiber attenuation, a reactor irradiation campaign has been initiated. Rabbit irradiation capsules have been designed to irradiate optical fiber material (low and high OH fused silica, as well as single crystal sapphire) specimens in the HFIR at temperatures ranging from 100 to 1200 deg. C. (authors)

42 ENGINEERING↗
DOE OSTI2022

Acid external and internal environment exchange the Oreochromis niloticus tissue immune gene expression compared to the mouse macrophage polarization model

The water environment plays an important role in animal physiology. In this study, we sought to evaluate the effect of the acid environment on the Oreochromis niloticus (Nile tilapia) internal microenvironment immune response compare to the mouse macrophage model (J77A.1). The acid environment treated mouse macrophage J774A.1 model have shown that acidic treatment is able to polarize macrophages into M2-like macrophages via an increase in Ym1, Tgm2, Arg1, Fizz1, and IL-10 expression. Metabolic analysis of mouse macrophages (J774A.1) at pH 2 vs. pH 7 and pH 4 vs. pH 7 have been shown to promote the expression of intracellular acetylcholine, choline, prochlorperazine, L-leucine, and bisphenol A,2-amino-3-methylimidazo[4,5-f] quinolone metabolites in the M2-like macrophage. Immune gene expression of the O. niloticus spleen and liver treated at pH 2, 4, and 7 was shown to reduce TNF-α, IL-1 β, IL-8, and IL-12 expression compared to pH 7 treatment. Immune gene was induced in O. niloticus following culture at pH 5, 6, and 7 fresh water environment. Taken together, we found that the acid internal environment polarizes tissues into an M2 macrophage developmental microenvironment. However, if the external environment is acid, tissues are exposed to an M1 macrophage developmental microenvironment.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Quenching in the Right Place at the Right Time: Tracing the Shared History of Starbursts, Active Galactic Nuclei, and Poststarburst Galaxies Using Their Structures and Multiscale Environments

This work uses multiscale environments and the structures of galaxies in the Sloan Digital Sky Survey as consistency checks on the evolution from starburst to quiescence at redshift z < 0.2. The environmental indicators include fixed-aperture mass overdensities (δ xMpc , x ϵ {0.5, 1, 2, 4, 8} h –1 Mpc), k-nearest neighbor distances, the tidal parameter, halo mass (M h ), and satellite/central classification. The residuals of the specific star formation rates (Δ SSFRs) are used to select starbursts (ΔSSFR > 0.6 dex, N ≈ 8600). Quenched poststarbursts (QPSBs) are selected using Hα < 3 Å emission and Hδ A > 4 Å absorption (N ≈ 750). The environments of starbursts and QPSBs are compared with those of active galactic nuclei (AGNs) and inactive galaxies of varying ΔSSFR. The environments of starbursts, AGNs, and QPSBs are unlike the environments of most quiescent galaxies (QGs). About 70%–90% of starbursts, AGNs with Hδ A > 4 Å, and QPSBs are centrals; ~80%–90% have M h < 10 13 M ⊙ , and only ~2%–4% have M h > 10 14 M ⊙ or live in clusters. Their M h and satellite fractions are also different from those of QGs. All QPSBs are matched to some SFGs, starbursts, AGNs, and QGs of similar M $\star$ , environments, concentration indices, and velocity dispersions. A significant fraction (~20%–30%) of starbursts cannot be matched to QPSBs or QGs. The implications are that: (1) some starbursts do not quench rapidly; (2) the satellite-quenching mechanisms operating in high-density environments cannot account for most QPSBs; (3) the evolution from starbursts to QPSBs to QGs is not the dominant path at z < 0.2; and (4) starbursts are not mainly triggered by tidal interactions.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRSDate not supplied

Update on Planetary, Lunar, & Asteroid Natural Environment Testbed (PLANET)

At ISMSE15, the Planetary, Lunar, & Asteroid Natural Environment Testbed (PLANET) was introduced as an upcoming high-fidelity, combined-effects planetary surface environment laboratory. This year, we will present an update on the facility status, describing the procurement, installation, commissioning of the chamber in Huntsville, Alabama (USA). With NASA’s push to return to the Moon through the Artemis program, there is a clear need for more high-fidelity test chambers that can replicate multiple aspects of the lunar surface, especially the fine, dusty lunar soil known as regolith. The PLANET chamber is designed to fill this gap, enabling research & development, qualification, and verification testing in a combined lunar surface environment, at an affordable price, for government, commercial/industry, and academic partners. Features include a large regolith simulant bed, low energy electron and ion sources to replicate the solar wind, full-spectrum UV and Solar simulation, and a liquid nitrogen cryogenic shroud, all in a high-vacuum environment (as low as 10^-7 mbar). PLANET’s initial focus will be on the lunar environment, but other surface environments (Martian, asteroid, etc.) are also possible to simulate. Besides the environmental instrumentation, PLANET will be equipped with specialized test systems that the Space Environmental Effects Team has developed over the past two years, including an in-situ tribometer and uniform dust distribution system. The chamber is currently being manufactured, with plans to install in May 2024. This will be followed by outfitting and commissioning. The challenges and accomplishments seen during this process will be detailed, and data from the first tests performed in PLANET will be shared with the community.

environmental testing↗
DOE OSTI2024

Formally Verified ZTA Requirements for OT/ICS Environments with Isabelle/HOL

The clean energy transformation includes the integration of distributed energy resources with the power grid, which has led to a substantial increase in the complexity of power grids infrastructure and the underlying operational technology environment. Power grids infrastructure represents an operational technology environment that has become a system of systems, integrating heterogeneous devices which are both software-and hardware-intensive; as a result, there are increasing demands to exploit advances in the commodity of software-hardware infrastructures to improve energy systems requirements such as cybersecurity and resilience. In such a setting, system requirements at different levels mix, which leads to vulnerabilities and undesirable outcomes. The use of formal methods to characterize and prove system requirements removes ambiguity, increases automation, and provides high levels of assurance and reliability. In this paper, we contribute a methodology and a framework for the system-level verification of zero trust architecture requirements in operational technology environments. We define a formal specification for the core functionalities of operational technology environments, the corresponding invariants, and security proofs. Of particular note is our modular approach for the formal verification of asynchronous interactions in operational technology environments. The formal specification and the proofs have been mechanized using the interactive theorem proving environment Isabelle/HOL.

formal methods↗
DOE OSTI2019

Cooling Environment Effect on the Microstructure and Mechanical Properties of Friction Stir-Welded Joints

The heat input in friction stir welding (FSW) influences the localized properties in welded joint. The external cooling during FSW reduces the localized heating and post-weld cooling time by extracting heat comparatively at a faster rate. In the present study, we have investigated the effect of different cooling environments on the performance of friction stir-welded (FSWed) AA5052 strain-hardenable aluminum alloy. Welding was performed under three different cooling environments such as natural air, water and liquid nitrogen in order to understand their effects on grain structure, metallurgical changes and mechanical properties of the joints. It has been noted that the width of weld nugget zone, thermo-mechanically affected zone and heat-affected zone has been decreased with the respective change in cooling environments. Welding speed could also influence the width of different zones in weldment alike the cooling environments. Finer grain size has been noticed with water cooling against the liquid nitrogen cooling. Comparatively, water was observed to be more favorable cooling environment against liquid nitrogen because of its better weld quality (97%) compared with base metal. The favorable mechanical properties resulting from the different weldment regions for different cooling environments have been elaborated in the present study.

36 MATERIALS SCIENCE↗
DOE OSTI2016

Comparison of PFASs contamination in the freshwater and terrestrial environments by analysis of eggs from osprey (Pandion haliaetus), tawny owl (Strix aluco), and common kestrel (Falco tinnunculus)

The level of PFAS (per- and polyfluorinated alkyl substances) contamination in freshwater and terrestrial Swedish environments in 2013/2014 was assessed by analyzing a range of perfluorinated alkyl acids, fluorotelomer acids, sulfonamides, sulfonamidoethanols and polyfluoralkyl phosphate diesters (diPAPs) in predator bird eggs. Stable isotopes ({sup 13}C and {sup 15}N) were analyzed to elucidate the dietary source. The tawny owl (Strix aluco, n=10) and common kestrel (Falco tinnunculus, n=40), two terrestrial species, and the osprey (Pandion haliaetus, n=30), a freshwater specie were included. In addition, a temporal trend (1997–2001, 2008–2009, 2013) in osprey was studied as well. The PFAS profile was dominated by perfluorooctane sulfonic acid (PFOS) in eggs from osprey and tawny owl, while for common kestrel perfluorinated carboxylic acids (∑PFCA) exceeded the level of PFOS. PFOS concentration in osprey eggs remained at the same level between 1997 and 2001 and 2013. For the long-chained PFCAs, there were a significant increase in concentrations in osprey eggs between 1997 and 2001 and 2008–2009. The levels of PFOS and PFCAs were about 10 and five times higher, respectively, in osprey compared to tawny owl and common kestrel. Evidence of direct exposure from PFCA precursor compounds to birds in both freshwater and terrestrial environment was observed. Low levels of diPAPs were detected in a few samples of osprey (<0.02–2.4 ng/g) and common kestrel (<0.02–0.16 ng/g) eggs, and 6:2 FTSA was detected in a majority of the osprey eggs (<6.3–52 ng/g). One saturated telomer acid (7:3 FTCA), which is a transformation marker from precursor exposure, was detected in all species (<0.24–2.7 ng/g). The {sup 15}N data showed higher levels in osprey eggs compared to tawny owl and common kestrel, indicating that they feed on a 2–3 times higher trophic level. We conclude that ospreys are continuously exposed to PFAS at levels where adverse toxic effects have been observed in birds. - Highlights: • Levels in the freshwater environment exceeded those of the terrestrial environment. • Birds in both freshwater and terrestrial environment are exposed to PFCA precursors. • No significant change of PFOS level in osprey eggs between 1997 and 2001 and 2013. • PFAS levels pose a risk to birds in the freshwater environment.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2015

Degradation of different elastomeric polymers in simulated geothermal environments at 300°C

This study evaluates the degradation of six different elastomeric polymers used for O-rings: EPDM, FEPM, type I- and II-FKM, FFKM, and FSR, in five different simulated geothermal environments at 300 °C: 1) non-aerated steam/cooling cycles, 2) aerated steam/cooling cycles, 3) water-based drilling fluid, 4) CO 2 -rich geo-brine fluid, and, 5) heat–cool water quenching cycles. The factors assessed included the extent of oxidation, changes in thermal behavior, micro-defects, permeation of ionic species from the test environments into the O-rings, silicate-related scale-deposition, and changes in the O-rings' elastic modulus. The reliability of the O-rings to maintain their integrity depended on the elastomeric polymer composition and the exposure environment. FSR disintegrated while EPDM was oxidized only to some degree in all the environments, FKM withstood heat-water quenching but underwent chemical degradation, FEPM survived in all the environments with the exception of heat-water quenching where it underwent severe oxidation-induced degradation, and FFKM displayed outstanding compatibility with all the tested environments. This study discusses the degradation mechanisms of the polymers under the aforementioned conditions.

15 GEOTHERMAL ENERGY↗
DOE OSTI2021

Crucial roles of eastward propagating environments in the summer MCS initiation over the U.S. Great Plains

Mesoscale convective systems (MCSs) frequently occur over the U.S. Great Plains during summer. An analysis using self-organizing map is conducted to identify four types of summer MCS initiation environments during 2004-2017. The first two types feature favorable large-scale environments at both upper and low levels, while Type-3 has favorable lower-level and surface conditions but unfavorable upper-level circulation, and Type-4 features the most unfavorable large-scale environments for MCS initiation. Despite the unfavorable large-scale environment, the convection-centered environments in Type-4 are favorable for MCS initiation and similar to the first two types, suggesting a role of sub-synoptic disturbances as an MCS precursor. All four types of the MCS initiation delineate a clear eastward propagating feature in many fields, such as upper-level potential vorticity/geopotential height, surface pressure and surface equivalent potential temperature, upstream up to 25°-longitude west of and ~36 hours before the MCS initiation. The propagating environments and local, non-propagating low-level moisture are found to be important in MCS initiation at the foothill of the Rocky Mountains, but over the central Great Plains, it is the coupling of dynamical and moisture anomalies associated with propagating waves that results in the MCS initiation. By tracking MCSs and mid-tropospheric perturbations (MPs), a type of sub-synoptic disturbances with Rocky Mountains origin, ~30% of MPs is associated with MCS initiation, mostly in Type-4. Although MPs are related to a small fraction of MCS initiation, MCSs that are associated with MPs tend to produce more rainfall in a larger area with a stronger convective intensity, suggesting MPs to be a source of intense MCSs in summer.

Song, Fengfei↗
DOE OSTI2023

A complete spectroscopic catalogue of local galaxies in the northern spring sky: Gas properties and nuclear activity in different environments

With the aim of providing the complete demography of galaxies in the local Universe, including their nuclear properties, we present SPRING, a complete census of local galaxies limited to the spring quarter of the northern sky (10h < RA < 16h; 0° < Dec < 65°). The SPRING catalogue is a flux- and volume-limited sample (r < 17.7 mag, cz < 10 000 km s -1 ) of 30 597 galaxies, including the Virgo, Coma, and A1367 clusters. Images and spectra were individually examined to clear the sample from unwanted entries. To inspect possible secular and environmental dependencies of the various nuclear excitation properties (star-forming versus active nuclei), we performed a multi-dimensional analysis by dividing the total sample according to: (i) their position in the (NUV - i) versus M star diagram, (ii) the local galaxy density, (iii) the stellar mass, (iv) the halo mass of the group to which galaxies belong, and (v) the neutral hydrogen content. We present a new calibration of the optical diameter-based H I-deficiency parameter H I def , employing a reference sample of isolated galaxies extracted from SPRING. At intermediate distances between Virgo and Coma, we identify a ring-like structure of galaxies constituted by three large filaments, each with a length of approximately 20h -1 Mpc, mostly composed of blue-cloud galaxies with stellar masses M star ≲ 10 10 M ⊙ . The fraction of H I-deficient galaxies within the filament (~30%) suggests that filaments are a transitioning environment between lower- and higher-overdensity environments in terms of H I content, as we find a clear progression from field galaxies to the filament and cluster galaxies for an increasing H I def parameter. We classify the nuclear spectra according to the four-line Baldwin-Phillips-Terlevich (BPT) and the two-line EWHα versus [NII]/Hα (WHAN) diagnostic diagrams, and investigate the variation in the fraction of active nuclei hosts with stellar mass, as well as their colours and environments. We observe that the fraction of low-ionisation nuclear emitting regions (LINERs) is a steep function of stellar mass, for example, it is consistent with zero up to M star ≲ 10 9.5 M ⊙ and becomes ~40% for M star ≳ 101 0.5 M ⊙ , whereas, for M star ≲ 10 9 - 9.5 M ⊙ , almost the entire spectroscopic sample is constituted of galaxies with star-forming nuclei. We investigate whether the nuclear-excitation fractions depend predominantly on the stellar mass or, conversely, on the galaxy environment. In general, we observe that the mass dependence of the fraction of Seyfert nuclei is not very sensitive to the galaxy environment, whereas the fraction of star-forming nuclei is a steeper function of stellar mass in lower-density environments and in blue-cloud galaxies. We find that the fraction of LINERs depends on galaxy colour and, for M star ≳ 10 9.5 - 10 M ⊙ , increases in galaxies belonging to the green valley.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2016

Energy transfer in structured and unstructured environments: Master equations beyond the Born-Markov approximations

We explore excitonic energy transfer dynamics in a molecular dimer system coupled to both structured and unstructured oscillator environments. By extending the reaction coordinate master equation technique developed by Iles-Smith et al. [Phys. Rev. A 90, 032114 (2014)], we go beyond the commonly used Born-Markov approximations to incorporate system-environment correlations and the resultant non-Markovian dynamical effects. We obtain energy transfer dynamics for both underdamped and overdamped oscillator environments that are in perfect agreement with the numerical hierarchical equations of motion over a wide range of parameters. Furthermore, we show that the Zusman equations, which may be obtained in a semiclassical limit of the reaction coordinate model, are often incapable of describing the correct dynamical behaviour. This demonstrates the necessity of properly accounting for quantum correlations generated between the system and its environment when the Born-Markov approximations no longer hold. Finally, we apply the reaction coordinate formalism to the case of a structured environment comprising of both underdamped (i.e., sharply peaked) and overdamped (broad) components simultaneously. We find that though an enhancement of the dimer energy transfer rate can be obtained when compared to an unstructured environment, its magnitude is rather sensitive to both the dimer-peak resonance conditions and the relative strengths of the underdamped and overdamped contributions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2015

A COMPARATIVE STUDY OF DENSITY FIELD ESTIMATION FOR GALAXIES: NEW INSIGHTS INTO THE EVOLUTION OF GALAXIES WITH ENVIRONMENT IN COSMOS OUT TO z ∼ 3

It is well-known that a galaxy’s environment has a fundamental influence in shaping its properties. We study the environmental effects on galaxy evolution, with an emphasis on the environment defined as the local number density of galaxies. The density field is estimated with different estimators (weighted adaptive kernel smoothing, 10th and 5th nearest neighbors, Voronoi and Delaunay tessellation) for a K{sub s} < 24 sample of ∼190,000 galaxies in the COSMOS field at 0.1 < z < 3.1. The performance of each estimator is evaluated with extensive simulations. We show that overall there is a good agreement between the estimated density fields using different methods over ∼2 dex in overdensity values. However, our simulations show that adaptive kernel and Voronoi tessellation outperform other methods. Using the Voronoi tessellation method, we assign surface densities to a mass complete sample of quiescent and star-forming galaxies out to z ∼ 3. We show that at a fixed stellar mass, the median color of quiescent galaxies does not depend on their host environment out to z ∼ 3. We find that the number and stellar mass density of massive (>10{sup 11} M{sub ⊙}) star-forming galaxies have not significantly changed since z ∼ 3, regardless of their environment. However, for massive quiescent systems at lower redshifts (z ≲ 1.3), we find a significant evolution in the number and stellar mass densities in denser environments compared to lower density regions. Our results suggest that the relation between stellar mass and local density is more fundamental than the color–density relation and that environment plays a significant role in quenching star-formation activity in galaxies at z ≲ 1.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2018

MicroPheno: predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples

Microbial communities play important roles in the function and maintenance of various biosystems, ranging from the human body to the environment. A major challenge in microbiome research is the classification of microbial communities of different environments or host phenotypes. The most common and cost-effective approach for such studies to date is 16S rRNA gene sequencing. Recent falls in sequencing costs have increased the demand for simple, efficient and accurate methods for rapid detection or diagnosis with proved applications in medicine, agriculture and forensic science. We describe a reference- and alignment-free approach for predicting environments and host phenotypes from 16S rRNA gene sequencing based on k-mer representations that benefits from a bootstrapping framework for investigating the sufficiency of shallow sub-samples. Deep learning methods as well as classical approaches were explored for predicting environments and host phenotypes. A k-mer distribution of shallow sub-samples outperformed Operational Taxonomic Unit (OTU) features in the tasks of body-site identification and Crohn’s disease prediction. Aside from being more accurate, using k-mer features in shallow sub-samples allows (i) skipping computationally costly sequence alignments required in OTU-picking and (ii) provided a proof of concept for the sufficiency of shallow and short-length 16S rRNA sequencing for phenotype prediction. In addition, k-mer features predicted representative 16S rRNA gene sequences of 18 ecological environments, and 5 organismal environments with high macro-F1 scores of 0.88 and 0.87. For large datasets, deep learning outperformed classical methods such as Random Forest and Support Vector Machine.

59 BASIC BIOLOGICAL SCIENCES↗