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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 343 records · Page 19
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

Enabling accurate chemical modeling of shocked energetic materials using a machine learning interatomic potential

Understanding the complex chemistry of organic materials under dynamic compression is important for many applications, but it is challenging due to the large number of reactions occurring at various time scales. Here, in this study, we develop a machine learning potential based on Chebyshev polynomials to study the insensitive energetic material 1,3,5-triamino-2,4,6-trinitrobenzene (TATB) under detonation. We discuss a strategy for constructing diverse training data needed to capture the complex chemistry of TATB. Our potential demonstrates strong transferability across a wide range of thermodynamic conditions and other explosives, enabling accurate and reliable chemical modeling of organic materials under extreme conditions. The efficiency of our approach allows for simulations over several nanoseconds and for large system sizes, providing detailed insights into the chemistry of shocked TATB. The model accurately reproduces experimental Hugoniot equation of state data, and our simulations reveal the rapid formation of nitrogen-rich carbon clusters following shock. The methods and datasets developed here offer a robust framework for accurate chemical modeling of other shocked organic energetic materials.

Chemistry↗
DOE OSTI2018

Polybrominated diphenyl ether (PBDE) neurotoxicity: a systematic review and meta-analysis of animal evidence

Background: Polybrominated diphenyl ethers (PBDEs) are ubiquitous in the environment, with well-documented and widespread human exposure. A recent systematic review and meta-analysis of human studies found an association between prenatal serum PBDE concentrations and a decrease in the IQ of children. Objective: Our goal was to demonstrate the application of systematic review methods, including meta-analysis (if possible), to animal toxicology data to draw conclusions about hazard. We performed a systematic review of experimental animal studies on the neurotoxicity of PBDEs following developmental exposure. Outcomes assessed included measures related to learning, memory, and attention, which parallel the intelligence-related outcomes evaluated in the systematic review of human studies. Methods: We searched PubMed, Embase, and Toxline for experimental studies in non-human mammals published in English through August 15, 2016. Evaluation of risk of bias and the overall body of evidence followed guidance developed by the National Toxicology Program’s Office of Health Assessment and Translation (OHAT). Results: The animal data on PBDEs and learning, memory, and attention were available for BDEs 47, 99, 153, 203, 206, and 209 and the technical mixture DE-71. These data were diverse and complex, with studies using varying designs and outcomes. There were concerns about risk of bias for many studies, and study reporting of methods and results was often incomplete. A meta-analysis of six studies showed consistent evidence of an increase in latency (effect size of 25.8 [CI, 20.3 to 31.2]) in the last trial of the Morris water maze in PBDE-exposed animals, with low heterogeneity. However, for most endpoints, there were unexplained inconsistencies across studies. There was also no consistent evidence of a dose-response relationship. Conclusions: Our analyses illustrates the application of systematic review methods to a chemical hazard assessment. There is a moderate level of evidence that exposure to BDEs 47, 99, and 209 affects learning. For other PBDEs and other endpoints, the level of evidence was low or very low. The meta-analysis led to stronger conclusions than would have been drawn based on a qualitative review of the evidence. The systematic review also identified factors that increased concerns about risk of bias in individual studies that might be remedied by better study reporting.

Polybrominated Diphenyl Ether↗
DOE OSTI2012

A LOWER INITIAL ABUNDANCE OF SHORT-LIVED {sup 41}Ca IN THE EARLY SOLAR SYSTEM AND ITS IMPLICATIONS FOR SOLAR SYSTEM FORMATION

The short-lived radionuclide {sup 41}Ca plays an important role in constraining the immediate astrophysical environment and the formation timescale of the nascent solar system due to its extremely short half-life (0.1 Myr). Nearly 20 years ago, the initial ratio of {sup 41}Ca/{sup 40}Ca in the solar system was determined to be (1.41 {+-} 0.14) Multiplication-Sign 10{sup -8}, primarily based on two Ca-Al-rich Inclusions (CAIs) from the CV chondrite Efremovka. With an advanced analytical technique for isotopic measurements, we reanalyzed the potassium isotopic compositions of the two Efremovka CAIs and inferred the initial ratios of {sup 41}Ca/{sup 40}Ca to be (2.6 {+-} 0.9) Multiplication-Sign 10{sup -9} and (1.4 {+-} 0.6) Multiplication-Sign 10{sup -9} (2{sigma}), a factor of 7-10 lower than the previously inferred value. Considering possible thermal processing that led to lower {sup 26}Al/{sup 27}Al ratios in the two CAIs, we propose that the true solar system initial value of {sup 41}Ca/{sup 40}Ca should have been {approx}4.2 Multiplication-Sign 10{sup -9}. Synchronicity could have existed between {sup 26}Al and {sup 41}Ca, indicating a uniform distribution of the two radionuclides at the time of CAI formation. The new initial {sup 41}Ca abundance is 4-16 times lower than the calculated value for steady-state galactic nucleosynthesis. Therefore, {sup 41}Ca could have originated as part of molecular cloud materials with a free decay time of 0.2-0.4 Myr. Alternative possibilities, such as a last-minute input from a stellar source and early solar system irradiation, could not be definitively ruled out. This underscores the need for more data from diverse CAIs to determine the true astrophysical origin of {sup 41}Ca.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2015

Motional displacements in proteins: The origin of wave-vector-dependent values

In the case of average mean-square displacement, r 2 , of H atoms in a protein, it is frequently determined using incoherent neutron-scattering experiments. r 2 is obtained from the observed elastic incoherent dynamic structure factor, S i (Q,ω =0), assuming the form S i (Q, ω =0) =exp( -Q 2 r 2 /3). Moreover, this is often referred to as the Gaussian approximation (GA) to S i (Q, ω =0). r 2 obtained in this way depends on the value of the wave vector, Q considered. Equivalently, the observed S i (Q, ω =0) deviates from the GA. We investigate the origin of the Q dependence of r 2 by evaluating the scattering functions in different approximations using molecular dynamics (MD) simulation of the protein lysozyme. We find that keeping only the Gaussian term in a cumulant expansion of S(Q, ω ) is an accurate approximation and is not the origin of the Q dependence of r 2 . We demonstrated by showing that the term beyond the Gaussian is negligible and that the GA is valid for an individual atom in the protein. Rather, the Q dependence (deviation from the GA) arises from the dynamical heterogeneity of the H in the protein. Specifically it arises from representing, in the analysis of data, this diverse dynamics by a single average scattering center that has a single, average r 2 . The observed Q dependence of r 2 can be used to provide information on the dynamical heterogeneity in proteins.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2013

An Overview of Internet biosurveillance

Internet biosurveillance utilizes unstructured data from diverse Web-based sources to provide early warning and situational awareness of public health threats. The scope of source coverage ranges from local based media in the vernacular to international media in widely read languages. Internet biosurveillance is a timely modality available to government and public health officials, health care workers, and the public and private sector, serving as a real-time complementary approach to traditional indicator-based public health disease surveillance methods. Internet biosurveillance also supports the broader activity of epidemic intelligence. This review covers the current state of the field of Internet biosurveillance and provides a perspective on the future of the field.

digital disease detection↗
DOE OSTI2011

TRY - a global database of plant traits

Plant traits – the morphological, anatomical, physiological, biochemical and phenological characteristics of plants and their organs – determine how primary producers respond to environmental factors, affect other trophic levels, influence ecosystem processes and services and provide a link from species richness to ecosystem functional diversity. Trait data thus represent the raw material for a wide range of research from evolutionary biology, community and functional ecology to biogeography. Here we present the global database initiative named TRY, which has united a wide range of the plant trait research community worldwide and gained an unprecedented buy-in of trait data: so far 93 trait databases have been contributed. The data repository currently contains almost three million trait entries for 69,000 out of the world's 300,000 plant species, with a focus on 52 groups of traits characterizing the vegetative and regeneration stages of the plant life cycle, including growth, dispersal, establishment and persistence. A first data analysis shows that most plant traits are approximately log-normally distributed, with widely differing ranges of variation across traits. Most trait variation is between species (interspecific), but significant intraspecific variation is also documented, up to 40% of the overall variation. Plant functional types (PFTs), as commonly used in vegetation models, capture a substantial fraction of the observed variation – but for several traits most variation occurs within PFTs, up to 75% of the overall variation. In the context of vegetation models these traits would better be represented by state variables rather than fixed parameter values. The improved availability of plant trait data in the unified global database is expected to support a paradigm shift from species to trait-based ecology, offer new opportunities for synthetic plant trait research and enable a more realistic and empirically grounded representation of terrestrial vegetation in Earth system models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Single‐parent expression drives dynamic gene expression complementation in maize hybrids

SUMMARY Single‐parent expression (SPE) is defined as gene expression in only one of the two parents. SPE can arise from differential expression between parental alleles, termed non‐presence/absence (non‐PAV) SPE, or from the physical absence of a gene in one parent, termed PAV SPE. We used transcriptome data of diverse Zea mays (maize) inbreds and hybrids, including 401 samples from five different tissues, to test for differences between these types of SPE genes. Although commonly observed, SPE is highly genotype and tissue specific. A positive correlation was observed between the genetic distance of the two inbred parents and the number of SPE genes identified. Regulatory analysis showed that PAV SPE and non‐PAV SPE genes are mainly regulated by cis effects, with a small fraction under trans regulation. Polymorphic transposable element insertions in promoter sequences contributed to the high level of cis regulation for PAV SPE and non‐PAV SPE genes. PAV SPE genes were more frequently expressed in hybrids than non‐PAV SPE genes. The expression of parentally silent alleles in hybrids of non‐PAV SPE genes was relatively rare but occurred in most hybrids. Non‐PAV SPE genes with expression of the silent allele in hybrids are more likely to exhibit above high parent expression level than hybrids that do not express the silent allele, leading to non‐additive expression. This study provides a comprehensive understanding of the nature of non‐PAV SPE and PAV SPE genes and their roles in gene expression complementation in maize hybrids.

Li, Zhi↗
DOE OSTI2020

Quantification of Ebola virus replication kinetics in vitro

Mathematical modelling has successfully been used to provide quantitative descriptions of many viral infections, but for the Ebola virus, which requires biosafety level 4 facilities for experimentation, modelling can play a crucial role. Ebola virus modelling efforts have primarily focused on in vivo virus kinetics, e.g., in animal models, to aid the development of antivirals and vaccines. But, thus far, these studies have not yielded a detailed specification of the infection cycle, which could provide a foundational description of the virus kinetics and thus a deeper understanding of their clinical manifestation. Here, we obtain a diverse experimental data set of the Ebola virus infection in vitro, and then make use of Bayesian inference methods to fully identify parameters in a mathematical model of the infection. Our results provide insights into the distribution of time an infected cell spends in the eclipse phase (the period between infection and the start of virus production), as well as the rate at which infectious virions lose infectivity. We suggest how these results can be used in future models to describe co-infection with defective interfering particles, which are an emerging alternative therapeutic.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Foundation Models of Scientific Knowledge for Chemistry: Opportunities, Challenges and Lessons Learned

Foundation models pre-trained on large corpora demonstrate significant gains across many natural language processing tasks and domains e.g., law, healthcare, education, etc. However, only limited efforts have investigated the opportunities and limitations of applying these powerful models to science and security applications. In this work we develop foundation models of scientific knowledge for chemistry to augment scientists with the advanced ability to perceive and reason at scale previously unimagined. Specifically, we build large-scale (1.47B parameter) general-purpose models for chemistry that can be effectively used to perform a wide range of in-domain and out-of-domain tasks. Evaluating these models in a zero-shot setting, we analyze the effect of model and data scaling, knowledge depth, and temporality on model performance in context of model training efficiency. Our novel findings demonstrate that (1) model size significantly contributes to the task performance when evaluated in a zero-shot setting; (2) data quality (aka diversity) affects model performance more than data quantity; (3) similarly, unlike previous work (Luu et al., 2021) temporal order of the documents in the corpus boosts model performance only for specific tasks, e.g., SciQ; and (4) models pre-trained from scratch perform better on in-domain tasks than those tuned from general-purpose models like Open AI’s GPT-2.

Foundation Models, Chemistry↗
DOE OSTI2016

Radiation-induced aging of PDMS Elastomer TR-55: a summary of constitutive, mesoscale, and population-based models

Filled and cross-linked elastomeric rubbers are versatile network materials with a multitude of applications ranging from artificial organs and biomedical devices to cushions, coatings, adhesives, interconnects, and seismic-isolation-, thermal-, and electrical barriers. External factors like mechanical stress, temperature fluctuations, or radiation are known to create chemical changes in such materials that can directly affect the molecular weight distribution (MWD) of the polymer between cross-links and alter the structural and mechanical properties. From a Materials Science point of view it is highly desirable to understand, effect, and manipulate such property changes in a controlled manner. In this report we summarize our modeling efforts on a polysiloxane elastomer TR-55, which is an important component in several of our systems, and representative of a wide class of filled rubber materials. The primary aging driver in this work has been γ-radiation, and a variety of modeling approaches have been employed, including constitutive, mesoscale, and population-based models. The work utilizes diverse experimental data, including mechanical stress-strain and compression set measurements, as well as MWD measurements using multiquantum NMR.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Unveiling the Hidden Evolution of Crystal Defects and Disorder in Energy Materials

Control of point defects and disorder in functional thin films and 2D materials is critical to realizing their full potential in applications ranging from energy storage to advanced electronics. However, these phenomena are often poorly understood, difficult to characterize, and challenging to direct with precision. This presentation explores emerging multi-modal computer vision to decipher and predict order in materials across multiple length scales in the electron microscope, from the atomic to the nanoscale. By fusing data from diverse sources, these powerful models provide unprecedented insights into materials' lifecycles, enabling the control of defects and their associated properties at a fundamental level. This capability promises to transform materials design and accelerate the development of next-generation technologies.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2026

Illuminating the Material World: Autonomous Microscopy to Understand Order, Disorder, and Everything In Between

Artificial intelligence (AI) holds immense promise for revolutionizing microscopy, yet its widespread adoption has been hindered by challenges ranging from user inexperience to limited model transferability and difficulties in operationalizing machine learning. This presentation showcases our approach to developing practical autonomy for materials discovery, aiming to accelerate the integration of AI into everyday microscopy workflows. As shown in Fig. 1, I will focus on three key areas: understanding order-disorder transitions, quantifying point defects, and achieving truly device-scale microscopy. First, I will demonstrate the power of multi-modal knowledge graphs for integrating diverse microscopy data. By combining imaging, spectroscopy, and diffraction data, these graphs provide a holistic view of material behavior, capturing the intricate relationships between different modalities [1,2]. I will present a case study on how these models illuminate the structural and chemical changes associated with irradiation in oxide thin films, revealing critical insights for designing materials for extreme environments like spaceflight and nuclear energy. Specifically, I will show how multi-modal analysis clarifies the evolution of order-disorder transitions under irradiation, a key factor influencing material performance in these applications. Next, I will address the challenge of quantifying point defects in 2D materials. We demonstrate the application of computer vision and transfer learning to accurately identify and classify various defect types, such as vacancies and substitutional atoms, and to quantify their concentrations. This information is crucial for understanding and tailoring the properties of 2D materials for applications in electronics, optoelectronics, and catalysis. For example, I will show how our models can characterize the topological distribution of point defects in MXene transition metal carbides, providing valuable insights for optimizing their performance in energy storage and separation science. Finally, I will discuss our progress toward autonomous device-scale microscopy [3,4]. We are fundamentally redesigning electron microscopes around the principles of machine reasoning, enabling automation beyond basic tasks like sample navigation and data acquisition to include sophisticated experimental design. This approach paves the way for truly reproducible and massively scaled analysis campaigns. I will emphasize the importance of autonomous microscopy platforms for high-throughput materials discovery and characterization, facilitating the rapid screening of materials for a broad range of applications and accelerating the development of next-generation technologies.

36 MATERIALS SCIENCE↗
DOE OSTI2018

Microbiomes Associated With Foods From Plant and Animal Sources

Food microbiome composition impacts food safety and quality. The resident microbiota of many food products is influenced throughout the farm to fork continuum by farming practices, environmental factors, and food manufacturing and processing procedures. Currently, most food microbiology studies rely on culture-dependent methods to identify bacteria. However, advances in high-throughput DNA sequencing technologies have enabled the use of targeted 16S rRNA gene sequencing to profile complex microbial communities including non-culturable members. In this study we used 16S rRNA gene sequencing to assess the microbiome profiles of plant and animal derived foods collected at two points in the manufacturing process; post-harvest/pre-retail (cilantro) and retail (cilantro, masala spice mixes, cucumbers, mung bean sprouts, and smoked salmon). Our findings revealed microbiome profiles, unique to each food, that were influenced by the moisture content (dry spices, fresh produce), packaging methods, such as modified atmospheric packaging (mung bean sprouts and smoked salmon), and manufacturing stage (cilantro prior to retail and at retail). The masala spice mixes and cucumbers were comprised mainly of Proteobacteria, Firmicutes, and Actinobacteria. Cilantro microbiome profiles consisted mainly of Proteobacteria, followed by Bacteroidetes, and low levels of Firmicutes and Actinobacteria. The two brands of mung bean sprouts and the three smoked salmon samples differed from one another in their microbiome composition, each predominated by either by Firmicutes or Proteobacteria. These data demonstrate diverse and highly variable resident microbial communities across food products, which is informative in the context of food safety, and spoilage where indigenous bacteria could hamper pathogen detection, and limit shelf life.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Multiscale astrobiology with the Vera C. Rubin Observatory Legacy Survey of Space and Time

The Vera C. Rubin Observatory’s Legacy Survey of Space and Time (LSST) presents an unprecedented opportunity to advance the search for astrobiologically relevant data across diverse astronomical environments. Through its extensive imaging capabilities, LSST will enhance our inventory of Solar System objects and assess their potential astrobiological conditions. Beyond the Solar System, LSST will survey billions of stars, contributing to the detection of exoplanets, characterizing planetary atmospheres at a zeroth-order level, identifying transient phenomena, and exploring conditions within habitable zones. In this paper, we highlight LSST’s unique contribution to astrobiology, complementing other missions and expanding the search for life beyond Earth in the coming decades.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

Deep X-Ray Observation of NGC 3221: Everything Everywhere All at Once

We present a comprehensive analysis of 475 ks (438 ks unpublished and 37 ks archival) XMM-Newton/EPIC-pn observations of a nearby, highly inclined, star-forming, luminous infrared galaxy NGC 3221 through spatial, temporal, and spectral information. We confirm the presence of a low-luminosity (presumably Compton-thick) active galactic nucleus (AGN). The 0.4–12 keV luminosity and the hardness ratio of the six ultraluminous X-ray sources previously identified in Chandra data exhibit diverse variability on day scales. The collective emission from unresolved sources exhibits a different day-scale variability. We have also discovered two new predominantly soft (<1 keV) sources. One of these has an enigmatic spectral shape featuring a soft component, which we interpret as a superbubble in NGC 3221, and a variable hard component from a compact object, unresolved from the superbubble. We do not confidently detect any X-ray emission from SN 1961L. The hot gas in the interstellar medium (ISM, out to ±6 kpc from the disk plane) and that in the extraplanar region (6–12 kpc) both require two thermal phases at ∼0.15 keV and ∼0.55 keV. The ∼0.55 keV component is fainter in the ISM than the ∼0.15 keV component, but the emission from the latter falls off more steeply with disk height than the emission from the former. This makes the extraplanar region hotter and less dense than the ISM. The proximity of NGC 3221 and the occurrence of the underluminous AGN offer a unique observing opportunity to study the hot diffuse medium along with nuclear and diskwide point sources.

Das, Sanskriti [Stanford Univ., CA (United States)↗
DOE OSTI2018

Design and results of the ice sheet model initialisation experiments initMIP-Greenland: an ISMIP6 intercomparison

Abstract. Earlier large-scale Greenland ice sheet sea-level projections (e.g. those run during the ice2sea and SeaRISE initiatives) have shown that ice sheet initial conditions have a large effect on the projections and give rise to important uncertainties. The goal of this initMIP-Greenland intercomparison exercise is to compare, evaluate, and improve the initialisation techniques used in the ice sheet modelling community and to estimate the associated uncertainties in modelled mass changes. initMIP-Greenland is the first in a series of ice sheet model intercomparison activities within ISMIP6 (the Ice Sheet Model Intercomparison Project for CMIP6), which is the primary activity within the Coupled Model Intercomparison Project Phase 6 (CMIP6) focusing on the ice sheets. Two experiments for the large-scale Greenland ice sheet have been designed to allow intercomparison between participating models of (1) the initial present-day state of the ice sheet and (2) the response in two idealised forward experiments. The forward experiments serve to evaluate the initialisation in terms of model drift (forward run without additional forcing) and in response to a large perturbation (prescribed surface mass balance anomaly); they should not be interpreted as sea-level projections. We present and discuss results that highlight the diversity of data sets, boundary conditions, and initialisation techniques used in the community to generate initial states of the Greenland ice sheet. We find good agreement across the ensemble for the dynamic response to surface mass balance changes in areas where the simulated ice sheets overlap but differences arising from the initial size of the ice sheet. The model drift in the control experiment is reduced for models that participated in earlier intercomparison exercises.

54 ENVIRONMENTAL SCIENCES↗