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At least 343 records · Page 19
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

Data for Engineering and Evolution of Yarrowia lipolytica for Producing Lipids from Lignocellulosic Hydrolysates

Yarrowia lipolytica , an oleaginous yeast, shows promise for industrial fermentation due to its robust acetyl-CoA flux and well-developed genetic engineering tools. However, its lack of an active xylose metabolism restricts the conversion of cellulosic sugars to valuable products. To address this, metabolic engineering, and adaptive laboratory evolution (ALE) were applied to the Y. lipolytica PO1f strain, resulting in an efficient xylose-assimilating strain (XEV). Whole-genome sequencing (WGS) of the XEV followed by reverse engineering revealed that the amplification of the heterologous oxidoreductase pathway and a mutation in the GTPase-activating protein gene (YALI0B12100g) might be the primary reasons for improved xylose assimilation in the XEV strain. When a sorghum hydrolysate was used, the XEV strain showed superior xylose consumption and lipid production compared to its parental strain (X123). This study advances our understanding of xylose metabolism in Y. lipolytica and proposes effective metabolic engineering strategies for optimizing lignocellulosic hydrolysates.

Hydrolysate↗
DOE OSTI2025

BT23 Updates for Med $70

BT23 update using the 2025 baseline and starting results in 2024 for Med $70 with updated budgets. Cost updates include: 1) Increased the nitrogen application for the following crops: willow, camelina, carinata, pennycress, and willow. 2) Removed roundup during establishment for the following crops: camelina. 3) Harvest costs were updated because the combine width was adjusted. This affected the following crops: barley, camelina, carinata, corn, oat, pennycress, rice, sorghum, soybean, and wheat. 4) Harvest cost was updated with biomass sorghum because an additional tractor was added to pull the high dump forage wagon, and the wagon width was adjusted to not constrain the harvest operation with the combine. 5) Added poplar in the ag budget database for regions 1 and 13.

agricultural crop↗
DOE OSTI2026

Agricultural crop production by county - mature-market medium scenario

This dataset contains data on agricultural crop production by county from 2022 to 2041. The agricultural crop in this dataset includes barley, biomass sorghum, corn, cotton, energy cane, eucalyptus, grain sorghum, hay, miscanthus, oats, pine, poplar, rice, soybean, switchgrass, wheat, and willow. The dataset was obtained from the database of the BT23 (Davis et al., 2024) for the mature-market medium scenario with biomass market prices from $30 to $130 per dry ton.

agricultural crop↗
DOE OSTI2025

Agricultural crop and residue production by county - near-term scenario

This dataset contains data on agricultural crop and residue production by county in 2030. The agricultural crops in this dataset include barley, corn, cotton, grain sorghum, hay, oats, rice, soybeans, and wheat. The agricultural residues include barley straw, corn stover, oats straw, sorghum stubble, and wheat straw. The dataset was obtained from the database of the BT23 (Davis et al.,2024) for the near-term scenario with biomass market prices of up to $70 per dry ton.

agricultural crop↗
DOE OSTI2022

Effect of Feedstock Variability, Feedstock Blends, and Pretreatment Conditions on Sugar Yield and Production Costs

Mass production of sustainable biofuels replacing fossil fuels will significantly reduce global greenhouse gas emissions. However, biomass feedstock variability, availability, and affordability pose significant risks for the sustainable production of biofuels in biorefinery plants. To derisk the sustainable production of biofuels, this work investigates the sugar yields and production costs of four different feedstocks as well as their blends, using different pretreatment methods: deacetylation and dilute acid pretreatment (DDA) and deacetylation and mechanical refining pretreatment (DMR). We found that not only feedstock species variability, but also feedstock harvesting techniques have large impacts on both sugar yields and production costs. Single-pass harvested corn stover (SPCS) showed higher sugar yields and lower production costs than multipass harvested corn stover, followed by sorghum and switchgrass. The highest glucose yields of 91% and 95.3%, which corresponds to the lowest sugar production costs of $0.2286/lb. and $0.2490/lb., were observed for SPCS using DDA and DMR, respectively. The difference in sugar yields and production costs due to feedstock variability can be largely mitigated by increasing deacetylation severity, especially in DMR. Higher deacetylation severity resulted in decreased sugar production costs in the case of DMR in contrast to increased costs in the case of DDA. Blending switchgrass and sorghum into corn stover, which can significantly increase the feedstock availability and sustainability, resulted in sugar yields and production costs of roughly the weighted average of those derived from constituent individual feedstocks, respectively. Thus, blending feedstocks of different biomass species is a potential successful strategy for sustainable production of biofuels to replace fossil-derived fuels.

09 BIOMASS FUELS↗
DOE OSTI2021

Estimating Leaf Area Index in Row Crops Using Wheel-Based and Airborne Discrete Return Light Detection and Ranging Data

Leaf area index (LAI) is an important variable for characterizing plant canopy in crop models. It is traditionally defined as the total one-sided leaf area per unit ground area and is estimated by both direct and indirect methods. This paper explores the effectiveness of using light detection and ranging (LiDAR) data to estimate LAI for sorghum and maize with different treatments at multiple times during the growing season from both a wheeled vehicle and Unmanned Aerial Vehicles. Linear and nonlinear regression models are investigated for prediction utilizing statistical and plant structure-based features extracted from the LiDAR point cloud data with ground reference obtained from an in-field plant canopy analyzer (indirect method). Results based on the value of the coefficient of determination ( R 2 ) and root mean squared error for predictive models ranged from ∼0.4 in the early season to ∼0.6 for sorghum and ∼0.5 to 0.80 for maize from 40 Days after Sowing to harvest.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Comprehensive Economic Impacts ofWild Pigs on Producers of Six Crops in the South-Eastern US and California

Wild pigs (Sus scrofa) cause damage to agricultural crops in their native range as well as in the portions of the globe where they have been introduced. In the US, states with the highest introduced wild pig populations are Alabama, Arkansas, California, Florida, Georgia, Louisiana, Mississippi, Missouri, North Carolina, South Carolina, and Texas. The present study summarizes the first survey-based effort to value the full extent of wild pig damage to producers of six crops in these eleven US states. The survey was distributed by the USDA National Agricultural Statistical Service in the summer of 2022 to a sample of 11,495 producers of corn (Zea mays), soybeans (Glycine max), wheat (Triticum spp.), rice (Oryza sativa), peanuts (Arachis hypogaea), and sorghum (Sorghum bicolor) in these 11 states. Our findings suggest that the economic burden of wild pigs on producers of these crops is substantial and not limited to the direct and most identifiable categories of crop damage (i.e., production value lost due to depredation, trampling and rooting). We estimate that the annual cost to producers of these six crops in the surveyed states in 2021 was almost USD 700 million.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2024

Fast, Nondestructive and Precise Biomass Measurements Are Possible Using Lidar-Based Convex Hull and Voxelization Algorithms

Light detection and ranging (lidar) scanning tools are available that can make rapid digital estimations of biomass. Voxelization and convex hull are two algorithms used to calculate the volume of the scanned plant canopy, which is correlated with biomass, often the primary trait of interest. Voxelization splits the scans into regular-sized cubes, or voxels, whereas the convex hull algorithm creates a polygon mesh around the outermost points of the point cloud and calculates the volume within that mesh. In this study, digital estimates of biomass were correlated against hand-harvested biomass for field-grown corn, broom corn, and energy sorghum. Voxelization (r = 0.92) and convex hull (r = 0.95) both correlated well with plant dry biomass. Lidar data were also collected in a large breeding trial with nearly 900 genotypes of energy sorghum. In contrast to the manual harvest studies, digital biomass estimations correlated poorly with yield collected from a forage harvester for both voxel count (r = 0.32) and convex hull volume (r = 0.39). However, further analysis showed that the coefficient of variation (CV, a measure of variability) for harvester-based estimates of biomass was greater than the CV of the voxel and convex-hull-based biomass estimates, indicating that poor correlation was due to harvester imprecision, not digital estimations. Overall, results indicate that the lidar-based digital biomass estimates presented here are comparable or more precise than current approaches.

Environmental Sciences & Ecology↗
DOE OSTI2022

Increased signal-to-noise ratios within experimental field trials by regressing spatially distributed soil properties as principal components

Environmental variability poses a major challenge to any field study. Researchers attempt to mitigate this challenge through replication. Thus, the ability to detect experimental signals is determined by the degree of replication and the amount of environmental variation, noise, within the experimental system. A major source of noise in field studies comes from the natural heterogeneity of soil properties which create microtreatments throughout the field. In addition, the variation within different soil properties is often nonrandomly distributed across a field. We explore this challenge through a sorghum field trial dataset with accompanying plant, microbiome, and soil property data. Diverse sorghum genotypes and two watering regimes were applied in a split-plot design. We describe a process of identifying, estimating, and controlling for the effects of spatially distributed soil properties on plant traits and microbial communities using minimal degrees of freedom. Importantly, this process provides a method with which sources of environmental variation in field data can be identified and adjusted, improving our ability to resolve effects of interest and to quantify subtle phenotypes.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Small signaling peptides, phylogenetic analysis

ML Phylogenetic analysis of small signaling peptides in Arabidopsis, Sorghum bicolor, Rice, Wheat, Maize, and Brachypodium. Sorghum only phylogenetic trees were used to name genes. All trees but RALF tree are rooted at midpoint.

Kurtz, Evan [Department of Biochemistry and Biophy↗
NASA NTRS1974

Reflectance of vegetation, soil, and water

The author has identified the following significant results. Iron deficient and normal grain sorghum plants were sufficiently different spectrally in ERTS-1 band 5 CCT data to detect chlorotic sorghum areas 2.8 acres (1.1 hectares) or larger in size in computer printouts of the MSS data. The ratio of band 5 to band 7 or band 7 minus band 5 relates to vegetation ground cover conditions and helps to select training samples representative of differing vegetation maturity or vigor classes and to estimate ground cover or green vegetation density in the absence of ground information. The four plant parameters; leaf area index, plant population, plant cover, and plant height explained 87 to 93% of the variability in band 6 digital counts and from 59 to 90% of the variation in bands 4 and 5. A ground area 2244 acres in size was classified on a pixel by pixel basis using simultaneously acquired aircraft support and ERTS-1 data. Overall recognition for vegetables, immature crops and mixed shrubs, and bare soil categories was 64.5% for aircraft and 59.6% for spacecraft data, respectively. Overall recognition results on a per field basis were 61.8% for aircraft and 62.8% for ERTS-1 data.

Wiegand, C. L.↗
NASA NTRS1974

Vegetation density as deduced from ERTS-1 MSS response

Reflectance from vegetation increases with increasing vegetation density in the 0.75- to 1.35 micron wavelength interval. Therefore, ERTS-1 bands 6 (0.7 to 0.8 micron) and 7 (0.8 to 1.1 micron) contain information that should relate to the probable yield of crops and the animal carrying capacity of rangeland. The results of an experiment designed specifically to test the relations among leaf area index (LAI), plant population, plant cover and plant height, and the ERTS-1 MSS responses for 3 corn, 10 sorghum, and 10 cotton fields are given. Plant population was as useful as LAI for characterizing the sorghum and corn fields, and plant height was as good as LAI for characterizing cotton fields. These findings generally support the utility of ERTS-1 data for explaining variability in green biomass, harvestable forage and other indicators of productivity.

Wiegand, C. L.↗
NASA NTRS1974

Reflectance of vegetation, soil, and water

The author has identified the following significant results. Bands 4, 5, and 7 and 5, 6, and 7 were best for distinguishing among crop and soil categories in ERTS-1 SCENES 1182-16322 (1-21-73) and 1308-16323 (5-21-73) respectively. Chlorotic sorghum areas 2.8 acres or larger in size were identified on a computer printout of band 5 data. Reflectance of crop residues was more often different from bare soil in band 4 than in bands 5, 6, and 7. Simultaneously acquired aircraft and spacecraft MSS data indicated that spacecraft surveys are as reliable as aircraft surveys. ERTS-1 data were successfully used to estimate acreage of citrus, cotton, and sorghum as well as idle crop land.

Wiegand, C. L.↗
NASA NTRS1976

Soil, Water, and Vegetation Conditions in South Texas

The author has identified the following significant results. Reflectance differences between the dead leaves of six crops (corn, cotton, sorghum, sugar cane, citrus, and avocado) and the respective bare soils where the dead leaves were lying on the ground were determined from laboratory spectrophotometric measurements over the 0.5- to 2.5 micron wavelength interval. The largest differences were in the near infrared waveband 0.75- to 1.35 microns. Leaf area index was predicted from plant height, percent ground cover, and plant population for irrigated and nonirrigated grain sorghum fields for the 1975 growing season.

Wiegand, C. L.↗
NASA NTRS1976

Ground cover estimated from aerial photographs

Estimates of per cent ground cover made by ground observers were compared with independent estimates made on the basis of low-altitude (640-1219 m) aerial photographs of the same fields. Standard statistical simple correlation and linear regression analyses revealed a high correlation between the two estimation methods. In crops such as grain, sorghum, corn, and forage sorghum, in which the broadest part of the leaf canopy is near the top of the plant, there was a tendency to overestimate the per cent ground cover from aerial photographs.

Gerbermann, A. H.↗
NASA NTRS1978

Remote sensing of crop type and maturity

A red-shift in the chlorophyll absorption edge of heading wheat and grain sorghum is clearly visible in high-spectral-resolution measurements made from a low-flying aircraft over Imperial Valley, California. The position of the absorption edge shifts progressively toward the longer wavelengths during the crop growth cycle. The red-shift of 7 to 10 nm can be measured by using 10 nm-wide spectral bands, centered at 745 nm and 785 nm. These two bands, plus a band in the pigment absorption region at 670 nm, contain enough information to identify wheat and grain sorghum in the heading stage, to indicate the degree of heading, and to indicate canopy density during the heading stage

Collins, W.↗
NASA NTRS1982

Comparisons among a new soil index and other two- and four-dimensional vegetation indices

The 2-D difference vegetation index (DVI) and perpendicular vegetation index (PVI), and the 4-D green vegetation index (GVI) are compared in LANDSAT MSS data from grain sorghum (Sorghum bicolor, L. Moench) fields for the years 1973 to 1977. PVI and DVI were more closely related to LAI than was GVI. A new 2-D soil line index (SLI), the vector distance from the soil line origin to the point of intersection of PVI with the soil line, is defined and compared with the 4-D soil brightness index, SBI. SLI (based on MSS and MSS7) and SL16 (based on MSS 5 and MSS 6) were smaller in magnitude than SBI but contained similar information about the soil background. These findings indicate that vegetation and soil indices calculated from the single visible and reflective infrared band sensor systems, such as the AVHRR of the TIROS-N polar orbiting series of satellites, will be meaningful for synoptic monitoring of renewable vegetation.

Wiegand, C. L.↗
NASA NTRS1983

A mathematical characterization of vegetation effect on microwave remote sensing from the Earth

In passive microwave remote sensing of the earth, a theoretical model that utilizes the radiative transfer equations was developed to account for the volume scattering effects of the vegetation canopy. Vegetation canopies such as alfalfa, sorghum, and corn are simulated by a layer of ellipsoidal scatterers and cylindrical structures. The ellipsoidal scatterers represent the leaves of vegetation and are randomly positioned and oriented. The orientation of ellipsoids is characterized by a probability density function of Eulerian angles of rotation. The cylindrical structures represent the stalks of vegetation and their radii are assumed to be much smaller than their lengths. The underlying soil is represented by a half-space medium with a homogeneous permittivity and uniform temperature profile. The radiative transfer quations are solved by a numerical method using a Gaussian quadrature formula to compute both the vertical and horizontal polarized brightness temperature as a function of observation angle. The theory was applied to the interpretation of experimental data obtained from sorghum covered fields near College Station, Texas.

Choe, Y.↗