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At least 343 records · Page 19

The Living With a Star CDAW on the Solar and Geospace Connections of Solar Energetic Particles

The Living With a Star Program is sponsoring its first CDAW (Coordinated Data Analysis Workshop) to be held July 23-26, 2002 at a conference support location near the NASA Goddard Space Flight Center. This CDAW's topic is Solar Energetic Particle events. The topic was chosen due to the breadth of the impact of SEP's on the space environment and terrestrial climate. General goals of the LWS CDAW are a) Stimulate LWS Science on the near term, b) Facilitate cross-disciplinary interaction between the LWS scientific and space environment communities, c) Produce science products for all potential users, and d) Assist in the development of the LWS data system. The workshop will proceed similar to a previous CDAW held in 1999 on Interplanetary Type 11 Shocks. A list of target events has been compiled, which can be found at the workshop home page. The page lists all of the SEP events from 1996 January to 2001 December with energy > 10 MeV particle intensities exceeding 10 PFU. Preparation for the workshop consists of identifying relevant data from a wide variety of sources (solar, interplanetary, magnetospheric and climatary), accumulating the data (frequently this consists of both raw data, processed data and plots to ease perusal during the workshop) and gathering the software tools. Participants in the workshop are expected to complete their contributions of data or models prior to arriving at the workshop. Most of the CDAW consists of joint analysis of this data; only a few introductory talks are given at the beginning of the workshop, with the rest of the time being devoted to producing scientific results. Additional symposia may be scheduled at a later date, which will allow a venue for scientific talks on the CDAW results and associated science. The poster will list the scientific goals of the workshop, as well as a scientific discussion of the data which has been accumulated thus far.

Thompson, Barbara J.↗

Accelerating the rate of discovery: toward high-repetition-rate HED science

As high-intensity short-pulse lasers that can operate at high-repetition-rate (HRR) (>10 H z ) come online around the world, the high energy density (HED) science they enable will experience a radical paradigm shift. The >10 3 increase in shot rate over today's shot-per-hour drivers translates into dramatically faster data acquisition, more experiments, and the ability to exploit machine learning, and thus the potential to significantly accelerate the advancement of HED science. A wide range of HED experiments, from opacity investigations to secondary source generation to plasma nuclear physics, will benefit from the increased statistics, precision, and exploration of phase space. Besides increasing the rate at which scientific experiments can be performed, HRR also allows for the rapid delivery of optimal experiments supported by simulations and modeling augmented by close coupling to empirical data. To fully realize such an HRR framework, numerous subsystems must be developed and brought together, including feedback laser control loops, high-throughput targetry and diagnostics, cognitive simulation, enhanced HED codes, and advanced data analytics. This paper describes the vision for an integrated HRR laser experimental HED system and outlines some of the major considerations and challenges for realizing it.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Iterative pass optimization of sequence data

The problem of determining the minimum-cost hypothetical ancestral sequences for a given cladogram is known to be NP-complete. This "tree alignment" problem has motivated the considerable effort placed in multiple sequence alignment procedures. Wheeler in 1996 proposed a heuristic method, direct optimization, to calculate cladogram costs without the intervention of multiple sequence alignment. This method, though more efficient in time and more effective in cladogram length than many alignment-based procedures, greedily optimizes nodes based on descendent information only. In their proposal of an exact multiple alignment solution, Sankoff et al. in 1976 described a heuristic procedure--the iterative improvement method--to create alignments at internal nodes by solving a series of median problems. The combination of a three-sequence direct optimization with iterative improvement and a branch-length-based cladogram cost procedure, provides an algorithm that frequently results in superior (i.e., lower) cladogram costs. This iterative pass optimization is both computation and memory intensive, but economies can be made to reduce this burden. An example in arthropod systematics is discussed. c2003 The Willi Hennig Society. Published by Elsevier Science (USA). All rights reserved.

NASA Discipline Evolutionary Biology↗

Management, Analysis, and Visualization of Experimental and Observational Data – The Convergence of Data and Computing

Scientific user facilities—particle accelerators, telescopes, colliders, supercomputers, light sources, sequencing facilities, and more—operated by the U.S. Department of Energy (DOE) Office of Science (SC) generate ever increasing volumes of data at unprecedented rates from experiments, observations, and simulations. At the same time there is a growing community of experimentalists that require real-time data analysis feedback, to enable them to steer their complex experimental instruments to optimized scientific outcomes and new discoveries. Recent efforts in DOE-SC have focused on articulating the data-centric challenges and opportunities facing these science communities. Key challenges include difficulties coping with data size, rate, and complexity in the context of both real-time and post-experiment data analysis and interpretation. Solutions will require algorithmic and mathematical advances, as well as hardware and software infrastructures that adequately support data-intensive scientific workloads. This paper presents the summary findings of a workshop held by DOE-SC in September 2015, convened to identify the major challenges and the research that is needed to meet those challenges.

Bethel, E. Wes↗

Management, Analysis, and Visualization of Experimental and Observational Data -- The Convergence of Data and Computing

Scientific user facilities---particle accelerators, telescopes, colliders, supercomputers, light sources, sequencing facilities, and more---operated by the U.S. Department of Energy (DOE) Office of Science (SC) generate ever increasing volumes of data at unprecedented rates from experiments, observations, and simulations. At the same time there is a growing community of experimentalists that require real-time data analysis feedback, to enable them to steer their complex experimental instruments to optimized scientific outcomes and new discoveries. Recent efforts in DOE-SC have focused on articulating the data-centric challenges and opportunities facing these science communities. Key challenges include difficulties coping with data size, rate, and complexity in the context of both real-time and post-experiment data analysis and interpretation. Solutions will require algorithmic and mathematical advances, as well as hardware and software infrastructures that adequately support data-intensive scientific workloads. This paper presents the summary findings of a workshop held by DOE-SC in September 2015, convened to identify the major challenges and the research that is needed to meet those challenges.

Bethel, E. Wes↗

Correlation Fourier diffractometry: 20 Years of experience at the IBR-2 reactor

The high-resolution Fourier diffractometer (HRFD) was commissioned at the IBR-2 pulsed reactor at FLNP JINR in 1994. The specific feature of the HRFD design is the use of fast Fourier chopper for modulating the primary neutron beam intensity and the correlation method of diffraction data acquisition. This allowed to reach with HRFD extremely high resolution (Δ d / d ≈ 0.001) over a wide range of inter-planar spacings at a relatively short flight path between chopper and sample (L = 20 m). Over time, a lot of diffraction experiments on crystalline materials, the main goal of which was to study their atomic and magnetic structures, were performed at HRFD. Successful implementation of the Fourier diffractometry technique at the IBR-2 reactor stimulated the construction of yet another Fourier diffractometer intended for internal mechanical stress studies in bulk materials (FSD, Fourier Stress Diffractometer). In this paper the experience of using this technique at the IBR-2, which is a long-pulse neutron source, is considered, the examples of HRFD studies are given, and possible solutions for existing technical problems of using correlation diffractometry and ways of increasing the intensity and resolution of HRFD are discussed.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

The upgrade of the Thomson scattering system for measurement on the C-2/C-2U devices

The C-2/C-2U Thomson scattering system has been substantially upgraded during the latter phase of C-2/C-2U program. A Rayleigh channel has been added to each of the three polychromators of the C-2/C-2U Thomson scattering system. Onsite spectral calibration has been applied to avoid the issue of different channel responses at different spots on the photomultiplier tube surface. With the added Rayleigh channel, the absolute intensity response of the system is calibrated with Rayleigh scattering in argon gas from 0.1 to 4 Torr, where the Rayleigh scattering signal is comparable to the Thomson scattering signal at electron densities from 1 × 10{sup 13} to 4 × 10{sup 14} cm{sup −3}. A new signal processing algorithm, using a maximum likelihood method and including detailed analysis of different noise contributions within the system, has been developed to obtain electron temperature and density profiles. The system setup, spectral and intensity calibration procedure and its outcome, data analysis, and the results of electron temperature/density profile measurements will be presented.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

NGEE Arctic Rainfall Simulator Validation Data from Los Alamos National Laboratory, New Mexico, Summer 2022

Experiments evaluating the uniformity and intensity of rainfall produced by the NGEE Arctic Rainfall Simulator (NARS) were conducted at Los Alamos National Laboratory, New Mexico, over summer 2022. Petri dishes were placed in a grid within the NARS plot. Simulated rainfall was collected in each petri dish and the intensity and uniformity of the simulator was subsequently calculated. This data package contains two .csv files, one that summarizes the rainfall intensity and uniformity for each experiment, the other that contains individual petri dish water volume and intensity for each plot location and experiment. The Python scripts to control NARS are also included. The NGEE Arctic Rainfall Simulator (NARS) is a variable intensity rainfall simulator (RFS) with a frame design based on the Humphry et al. (2002) RFS and a water delivery system based on the Walnut Gulch (Paige et al., 2004) RFS. The NARS uses an aluminum frame that is fully deconstructable for transportation to field locations and a water system that enables variable rain intensity. Rain intensity control and data collection are automated using a Raspberry Pi microcomputer. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 15-year research effort (2012-2027) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

AN ALMA IMAGING STUDY OF METHYL FORMATE (HCOOCH{sub 3}) IN TORSIONALLY EXCITED STATES TOWARD ORION KL

We recently reported the first identification of rotational transitions of methyl formate (HCOOCH{sub 3}) in the second torsionally excited state toward Orion Kleinmann-Low (KL), observed with the Nobeyama 45 m telescope. In combination with the identified transitions of methyl formate in the ground state and the first torsional excited state, it was found that there is a difference in rotational temperature and vibrational temperature, where the latter is higher. In this study, high spatial resolution analysis by using Atacama Large Millimeter/Submillimeter Array (ALMA) science verification data was carried out to verify and understand this difference. Toward the Compact Ridge, two different velocity components at 7.3 and 9.1 km s{sup −1} were confirmed, while a single component at 7.3 km s{sup −1} was identified toward the Hot Core. The intensity maps in the ground, first, and second torsional excited states have quite similar distributions. Using extensive ALMA data, we determined the rotational and vibrational temperatures for the Compact Ridge and Hot Core by the conventional rotation diagram method. The rotational temperature and vibrational temperatures agree for the Hot Core and for one component of the Compact Ridge. At the 7.3 km s{sup −1} velocity component for the Compact Ridge, the rotational temperature was found to be higher than the vibrational temperature. This is different from what we obtained from the results by using the single-dish observation. The difference might be explained by the beam dilution effect of the single-dish data and/or the smaller number of observed transitions within the limited range of energy levels (≤30 K) of E{sub u} in the previous study.

79 ASTRONOMY AND ASTROPHYSICS↗

Science and Technology Review January/February 2011

This month's issue has the following articles: (1) World's Most Intense X-Ray Laser Focuses on Livermore Science - Commentary by William H. Goldstein; (2) Groundbreaking Science with the World's Brightest X Rays - Experiments with x rays of unparalleled brightness and extremely short duration aim to reveal new information about atoms and molecules in motion; (3) From Data to Discovery - Ongoing control system enhancements at the National Ignition Facility bolster the understanding of experimental data and keep the system performing at its peak; (4) The Sun in All Its Splendor - Onboard the Solar Dynamics Observatory, Livermore-developed multilayer mirrors are enabling unprecedented full-disk, high-resolution images of the Sun; and (5) Drilling Deep into Plant Veins - A novel combination of imaging techniques is being used to understand the three-dimensional architecture of plant cell walls.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Mars Reconnaissance Orbiter Navigation

Mars Reconnaissance Orbiter will launch in August 2005 at Cape Canaveral Air Force Station. The heavyweight spacecraft will use a Lockheed-Martin Atlas V-401 launch vehicle. It will be the first mission in a low Mars Orbit to characterize the surface, subsurface, and atmospheric properties. The intensive science operation imposes a great challenge for Navigation to satisfy the stringent requirements. This paper describes navigation key requirements, major challenges, and the sophisticated dynamic modeling. It also details navigation strategy and processes for various mission phases. Mars Reconnaissance Orbiter will return significant amount of scientific data in support of the objectives set by the Mars Exploration Program. A robust and precise navigation is the key to the success of this mission.

navigation↗

Normalization and missing value imputation for label-free LC-MS analysis

Shotgun proteomic data are affected by a variety of known and unknown systematic biases as well as high proportions of missing values. Typically, normalization is performed in an attempt to remove systematic biases from the data before statistical inference, sometimes followed by missing value imputation to obtain a complete matrix of intensities. Here we discuss several approaches to normalization and dealing with missing values, some initially developed for microarray data and some developed specifically for mass spectrometry-based data.

Environmental Molecular Sciences Laboratory↗

Holistic Interactions of Shallow Clouds, Aerosols, and Land-Ecosystems (HI-SCALE) Science Plan

Cumulus convection is an important component in the atmospheric radiation budget and hydrologic cycle over the Southern Great Plains and over many regions of the world, particularly during the summertime growing season when intense turbulence induced by surface radiation couples the land surface to clouds. Current convective cloud parameterizations contain uncertainties resulting in part from insufficient coincident data that couples cloud macrophysical and microphysical properties to inhomogeneities in boundary layer and aerosol properties. The Holistic Interactions of Shallow Clouds, Aerosols, and Land-Ecosystems (HI-SCALE) campaign is designed to provide a detailed set of measurements that are needed to obtain a more complete understanding of the life cycle of shallow clouds by coupling cloud macrophysical and microphysical properties to land surface properties, ecosystems, and aerosols. HI-SCALE consists of 2, 4-week intensive observational periods, one in the spring and the other in the late summer, to take advantage of different stages and distribution of “greenness” for various types of vegetation in the vicinity of the Atmospheric Radiation and Measurement (ARM) Climate Research Facility’s Southern Great Plains (SGP) site as well as aerosol properties that vary during the growing season. Most of the proposed instrumentation will be deployed on the ARM Aerial Facility (AAF) Gulfstream 1 (G-1) aircraft, including those that measure atmospheric turbulence, cloud water content and drop size distributions, aerosol precursor gases, aerosol chemical composition and size distributions, and cloud condensation nuclei concentrations. Routine ARM aerosol measurements made at the surface will be supplemented with aerosol microphysical properties measurements. The G-1 aircraft will complete transects over the SGP Central Facility at multiple altitudes within the boundary layer, within clouds, and above clouds.

Fast, JD↗

Intensity-based rock detection for acquiring onboard rover science

Missions to Mars already under study call for very long autonomous traverses (on the order of hundreds of meters per sol) during which there will be limited contact with Earth. The onboard Autonomous Science Investigation System (OASIS) is a technology for increasing science return during rover traverses by prioritizing science opportunities. By prioritizing data for downlink onboard, it is expected that the set of images selected for downlink by OASIS will have a consistently higher scientific interest then any set of equal number of images of the same traverse obtained using random or periodic sampling. Thus, OASIS can be used to increase the science returned from a long traverse. OASIS prioritizes data and identifies science opportunities by extracting information from image data and then using this information to prioritize the data and identify potential new science opportunities. Currently, the information extracted from the images is the location of the rocks in the image and several properties of these rocks such as size, albedo, texture and shape, In this paper we give an overview of the role of rock detection in the OASIS system and describe the functionality of the rock detector. We then present results on representative images

Judd, Michele↗

Installation and commissioning of the ion source systems for the new spallation neutron source 2.5 MeV injector

The U.S. Spallation Neutron Source (SNS) is a state-of-the-art neutron scattering facility delivering the world’s most intense pulsed neutron beams to a wide array of instruments, which are used to conduct investigations in many fields of engineering, physics, chemistry, material science, and biology. Neutrons are produced by spallation of liquid Hg by the bombardment of short (∼1 µs), intense (∼35 A) pulses of protons delivered at 60 Hz by an accumulator ring which is fed by a high-intensity, 1 GeV, H− LINAC (linear accelerator). This facility has operated nearly continuously since 2006 but has recently undergone a 4-month maintenance period, which featured a complete replacement of the 2.5 MeV injector feeding the LINAC. The new injector was developed at ORNL in an off-line beam test facility and consists of an ion source, low energy beam transport, and a Radio Frequency Quadrupole (RFQ). This report first describes the installed configuration of the new injector detailing the ion source system. The first beam current, RFQ transmission, emittance, and energy measurements from the injector installed on the SNS are reported. These data not only show a significant performance improvement for our existing facility but will also make accessible the higher beam current requirements for future SNS upgrade projects: the proton power upgrade and second target station.

Welton, R. F.↗

Supercomputers, Clouds and Grids powered by BigPanDA for Brain studies

The PanDA WMS - Production and Distributed Analysis Workload Management System - has been developed and used by the ATLAS experiment at the LHC (Large Hadron Collider) for all data processing and analysis challenges. BigPanDA is an extension of the PanDA WMS to run ATLAS and non-ATLAS applications on Leadership Class Facilities and supercomputers, as well as traditional grid and cloud resources. The success of the BigPanDA project has drawn attention from other compute intensive sciences such as biology. In 2017, a pilot project was started between BigPanDA and the Blue Brain Project (BBP) of the Ecole Polytechnique Federal de Lausanne (EPFL) located in Lausanne, Switzerland. This proof of concept project is aimed at demonstrating the efficient application of the BigPanDA system to support the complex scientific workflow of the BBP, which relies on using a mix of desktop, cluster and supercomputers to reconstruct and simulate accurate models of brain tissue.

Computer Science↗

Curifactory: A research experiment manager

Curifactory is a command line tool and framework for organizing Python experiment code, configuration parameters, and results. It is an opinionated and lightweight approach to workflow management infrastructure and is primarily intended to support researchers conducting experiments on one machine. This software was developed to support the reproducibility of results for several data science projects in the Nuclear Nonproliferation Division at Oak Ridge National Laboratory. Curifactory is intended to be a general framework and is not specific to machine learning or data science. It can aid in any field in which experiments are primarily computation-based studies and can be implemented in Python (e.g., high-energy physics, astronomy, computational chemistry). Here, the design emphasizes the automated caching of intermediate data analysis artifacts to speed up development involving computationally intensive tasks. It also allows for data provenance and experiment reproduction. Individual experiment runs are tracked through logs and their output reports, and entire copies of a run with all cached data and metadata can be exported for others to run using Curifactory on another machine. Curifactory experiments can either be integrated into a project from the beginning or can be written on top of an existing codebase without needing significant modification. A few important views of the Curifactory library can be seen in Figure 1.

97 MATHEMATICS AND COMPUTING↗

Evidence for a distant ( 8700 R sub J) Jovian magnetotail: Voyager 2 observations

A correlative survey of magnetometer (MAG) and Planetary Radio Astronomy (PRA) 1.2 kHz continuum radiation measurements from Voyager 2 provide evidence for at least eight distant Jovian magnetotail sightings occurring about once a month over the first 2/3 of 1981 at distances of approximately 5,000 to 9,000 R sub J. The occurrences of these events are in good agreement with prior Plasma Wave Science and Plasma Science identifications. Observations of these distant magnetotail, or tail filament, encounters appear most prevalent in both MAC and PRA data sets when the spacecraft was closest to the Jupiter-Sun axis at approximately 6,500 R sub J from the planet; the PRA events are also most intense during those times. A specific tail encounter occurring in mid-February 1981 is analyzed and shown to possess a remarkably symmetric magnetic field signature and to have a bipolar field structure in the central region. The bipolarity is characteristic of most of the eight events.

Lepping, R. P.↗