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All sourcesNASA NTRSDOE OSTI
NASA NTRS2020

Current and Future Remote Sensing of Harmful Algal Blooms in the Chesapeake Bay to Support the Shellfish Industry

Harmful algal bloom (HAB) species in the Chesapeake Bay can negatively impact fish, shellfish, and human health via the production of toxins and the degradation of water quality. Due to the deleterious effects of HAB species on economically and environmentally important resources, such as oyster reef systems, Bay area resource managers are seeking ways to monitor HABs and water quality at large spatial and fine temporal scales. The use of satellite ocean color imagery has proven to be a beneficial tool for resource management in other locations around the world where high-biomass, nearly monospecific HABs occur. However, remotely monitoring HABs in the Chesapeake Bay is complicated by the presence of multiple, often co-occurring, species and optically-complex waters. Here we present a summary of common marine and estuarine HAB species found in the Chesapeake Bay, Alexandrium monilatum, Karlodinium veneficum, Margalefidinium polykrikoides, and Prorocentrum minimum, that have been detected from space using multispectral data products from the Ocean and Land Color Imager (OLCI) sensor on the Sentinel-3 satellites and identified based on historic phytoplankton data, in situ sampling, and ecological associations. We review how future hyperspectral instruments will improve discrimination of potentially harmful species from other phytoplankton communities and present a framework in which satellite data products could aid Chesapeake Bay resource managers with monitoring water quality and protecting shellfish resources.

Chesapeake Bay, satellite remote sensing, harmful ↗
NASA NTRS1994

Factors affecting the identification of phytoplankton groups by means of remote sensing

A literature review was conducted on the state of the art as to whether or not information about communities and populations of phytoplankton in aquatic environments can be derived by remote sensing. In order to arrive at this goal, the spectral characteristics of various types of phytoplankton were compared to determine first, whether there are characteristic differences in pigmentation among the types and second, whether such differences can be detected remotely. In addition to the literature review, an extensive, but not exhaustive, annotated bibliography of the literature that bears on these questions is included as an appendix, since it constitutes a convenient resource for anyone wishing an overview of the field of ocean color. The review found some progress has already been made in remote sensing of assemblages such as coccolithophorid blooms, mats of cyanobacteria, and red tides. Much more information about the composition of algal groups is potentially available by remote sensing particularly in water bodies having higher phytoplankton concentrations, but it will be necessary to develop the remote sensing techniques required for working in so-called Case 2 waters. It is also clear that none of the satellite sensors presently available or soon to be launched is ideal from the point of view of what we might wish to know; it would seem wise to pursue instruments with the planned characteristics of the Moderate Resolution Imaging Spectrometer-Tilt (MODIS-T) or Medium Resolution Imaging Spectrometer (MERIS).

Weaver, Ellen C.↗
NASA NTRSDate not supplied

Uncertainty Analysis of the GeoNEX Top-of-Atmospheric Reflectance Products Generated from the Third-Generation Geostationary Satellite Sensors

The GeoNEX (Geostationary-NASA Earth eXchange) Level-1G products consist of top-of-atmosphere (TOA) bi-directional reflectance factor (BRF) and brightness temperature generated with data streams from the latest geostationary (GEO) sensors including GOES-16/17 ABI, Himawari-8/9 AHI, and GK-2A AMI on a global tiled common grid (60oN-60o and 180oW-180oE) in geographic coordinates. With their 16 spectral bands, 0.01o/0.02o nadir spatial resolution, and 10-minute temporal resolutions, these products provide exciting opportunity to monitor Earth surface processes. However, the unique Sun-Target-Satellite geometry of geostationary sensors demands special attention in analyzing/interpreting these datasets. In this study we present a systematic analysis on the relationship between the radiometric uncertainties of the GeoNEX TOA reflectance and the corresponding solar/satellite zenith angles. We show that the signal-to-noise ratio (SNR) of the BRF are positively proportional to the square roots of the cosine of solar illuminating zenith angles. That is, the BRF data are noisier earlier in the morning or later in the afternoon than in the mid of the day. The cosine of satellite viewing zenith angles do not directly influence the SNR of the TOA BRF. However, they positively regulate the relative importance of the surface component in the TOA BRF. This means that variations in surface reflectance are more difficult to detect for pixels with larger view zenith angles, even when the SNR of the TOA BRF is the same. We are developing metrics to specify such illumination-view geometry related uncertainties in the GeoNEX L1G TOA BRF products so that this key information can be easily accessed by the user community.

Geostationary satellite↗
NASA NTRS2014

Destination Station: Bringing The International Space Station to Communities Across the United States

Today, space is no longer just a field of advanced technological development and of scientific research of excellence, but has become an essential asset for everyday life. Space has spurred countless scientific and technological achievements which are commonly used in aeronautics, medicine, material science and production, in information and communications technology. In parallel, more and more services are carried out through the use of space applications, ranging from detection of natural disasters and environmental monitoring to global navigation and telecommunication. Using space missions to build a better understanding of the universe fulfills our centuries-old curiosity and leads humanity into the future, opening up new frontiers of knowledge. The International Astronautical Congresses have always represented an arena in which issues have been discussed with friendship and among experts: scientists, technicians and managers from universities, agencies, research centres and industry. At the same time it introduces students and young professionals to the field.

Edgington, Susan↗
NASA NTRSDate not supplied

NDE Methods and Capabilities Handbook - Resources for the Composites NDE Community

Composite structures are often difficult to inspect due to the anisotropic nature of the material systems and the range of flaws and defects that can arise in the manufacturing process. NASA’s Advanced Composites Project, a public-private partnership between government, universities and industry, sought to address improved methods, tools, and protocols to reduce the development and certification timeline for composite materials and structures. The rapid inspection of composites was one of the three focused research areas of the project. One deliverable of the project was to develop an NDE Methods and Capabilities Handbook. This Handbook provides a publicly available guidance document that facilitates the selection of appropriate NDE techniques and provides recommended protocols for detecting and characterizing common flaw types in solid laminate carbon fiber reinforced polymer composite (CFRP) structures. The Handbook seeks to reduce the time required to develop qualified inspection processes for composite aircraft structures during the development, certification, and manufacturing phases by providing a reference that helps minimize trial and error and provides guidance on best practices, techniques, and settings, for specific flaw types and geometries. Techniques include, but are not limited to ultrasound, laser based ultrasound, infrared thermography, and x-ray CT. Flaw types include, but are not limited to porosity, delaminations, voids, Automated Fiber Placement (AFP) defects and impact damage. The Handbook contains details such as inspection parameters, data analysis techniques, inspection efficiency and limitations. This paper describes key Handbook activities with examples of the techniques and flaw types examined by the Advanced Composite Consortium members. Availability to the NDE community of the fabricated NDE standards as well as the raw data collected on the standards by the Consortium members is discussed.

nondestructive evaluation↗
NASA NTRS2020

Object-Based Comparison of Data-Driven and Physics-Driven Satellite Estimates of Extreme Rainfall

The Global Precipitation Measurement (GPM) constellation of spaceborne sensors provides a variety of direct and indirect measurements of precipitation processes. Such observations can be employed to derive spatially and temporally consistent gridded precipitation estimates either via data-driven retrieval algorithms or by assimilation into physically based numerical weather models. We compare the data-driven Integrated Multisatellite Retrievals for GPM (IMERG) and the assimilation-enabled NASA-Unified Weather Research and Forecasting (NU-WRF) model against Stage IV reference precipitation for four major extreme rainfall events in the southeastern United States using an object-based analysis framework that decomposes gridded precipitation fields into storm objects. As an alternative to conventional ‘‘grid-by-grid analysis,’’ the object-based approach provides a promising way to diagnose spatial properties of storms, trace them through space and time, and connect their accuracy to storm types and input data sources. The evolution of two tropical cyclones are generally captured by IMERG and NU-WRF, while the less organized spatial patterns of two mesoscale convective systems pose challenges for both. NU-WRF rain rates are generally more accurate, while IMERG better captures storm location and shape. Both show higher skill in detecting large, intense storms compared to smaller, weaker storms. IMERG’s accuracy depends on the input microwave and infrared data sources; NU-WRF does not appear to exhibit this dependence. Findings highlight that an object-oriented view can provide deeper insights into satellite precipitation performance and that the satellite precipitation community should further explore the potential for ‘‘hybrid’’ data-driven and physics-driven estimates in order to make optimal usage of satellite observations.

extreme events↗
NASA NTRSDate not supplied

NDE Methods and Capabilities Handbook - Resources for the Composites NDE Community

Composite structures are often difficult to inspect due to the anisotropic nature of the material systems and the range of flaws and defects that can arise in the manufacturing process. NASA’s Advanced Composites Project, a public-private partnership between government, universities and industry, sought to address improved methods, tools, and protocols to reduce the development and certification timeline for composite materials and structures. The rapid inspection of composites was one of the three focused research areas of the project. One deliverable of the project was to develop an NDE Methods and Capabilities Handbook. This Handbook provides a publicly available guidance document that facilitates the selection of appropriate NDE techniques and provides recommended protocols for detecting and characterizing common flaw types in solid laminate carbon fiber reinforced polymer composite (CFRP) structures. The Handbook seeks to reduce the time required to develop qualified inspection processes for composite aircraft structures during the development, certification, and manufacturing phases by providing a reference that helps minimize trial and error and provides guidance on best practices, techniques, and settings, for specific flaw types and geometries. Techniques include, but are not limited to ultrasound, laser based ultrasound, infrared thermography, and x-ray CT. Flaw types include, but are not limited to porosity, delaminations, voids, Automated Fiber Placement (AFP) defects and impact damage. The Handbook contains details such as inspection parameters, data analysis techniques, inspection efficiency and limitations. This presentation will describe key Handbook activities with examples of the techniques and flaw types examined by the Advanced Composite Consortium members. Availability to the NDE community of the fabricated NDE standards as well as the raw data collected on the standards by the Consortium members is discussed.

Nondestructive Evaluation↗
NASA NTRS2024

Herpesviruses in Saliva and Their Clinical Significance

Saliva has been used as a source of biological markers for a wide spectrum of normal and disease states for a long time. It is a non-invasive, easily accessible, and self-collected body fluid that contains a variety of measurable biological substances. While mostly water, saliva also contains ions, carbohydrates, proteins and peptides, exfoliated cells, nucleic acids, and microorganisms. Saliva can reflect tissue levels of some natural substances and a large variety of molecules introduced for therapeutic use, emotional status; hormonal status, immunological status, neurological effects, and nutritional and metabolic status. It can also be used to monitor a variety of drugs including marijuana, cocaine, and alcohol. It is the most cost-effective approach for screening large population in community mass screening programs and for longitudinal sampling of hospitalized individuals aimed at monitoring viral load dynamics and treatment response. During the COVID-19 pandemic, scientific evidence emerged indicating that molecular tests performed on saliva have diagnostic sensitivity and specificity comparable to those observed with nasopharyngeal swabs for SARS-CoV-2 RNA detection. The presence of IgA and IgG antibodies at the mucosal level has been demonstrated to influence the progression of viral infection and the severity of clinical manifestation. As saliva contains both respiratory secretions and immunological components, it has wide applications, ranging from clinical diagnostics to post-vaccine disease burden and immunity surveillance.

Douglass Diak↗
NASA NTRS1985

Preliminary Analysis of AIS Spectral Data Acquired from Semi-arid Shrub Communities in the Owens Valley, California

Spectral characteristics of semic-arid plant communities using 128 channel airborne imaging spectrometer (AIS) data acquired on October 30, 1984. Both field and AIS spectra of vegetation were relatively featureless and differed from substrate spectra primarily in albedo. Unvegetated sand dunes were examined to assess spectral variation resulting from topographic irregularity. Although shrub cover as low as 10% could be detected on relatively flat surfaces, such differences were obscured in more heterogeneous terrain. Sagebrush-covered fans which had been scarred by fire were studied to determine the effect of changes in plant density on reflectance. Despite noise in the atmospherically corrected spectra, these provide better resolution of differences in plant density than spectra which are solar-corrected only. A high negative correlation was found between reflectance and plant cover in areas which had uniform substrates and vegetation types. A lower correlation was found where vegetation and substrates were more diverse.

Ustin, S. L.↗
NASA NTRS2008

Gamma Ray Burst Discoveries by the Swift Mission

With 3 years of on-orbit operations (launched in Nov 2004), Swift has detected over 300 gammaray bursts (GRBs). The unique combination of quick and accurate position determinations by the BAT instrument, fast autonomous spacecraft slewing, and multi-band instrumentation (XRT and UVOT) has allowed Swift to accumulate a long list of discoveries about GRBs. These positions are also available to the ground follow-up community (via TDRSS and GCN) within 15-30 sec. A summary of these discoveries will be given (e.g. long and short GRB host associations, SN associations, flaring and on-going activity in the central engine). The Swift spacecraft and instruments are in fine working order with no signs of performance degradation. With an expected orbital lifetime well past 2020, the overlap with GLAST (launch in mid-2008) will yield greater than 30 GRBs/year with observations by both missions. This will provide an unprecedented wavelength coverage from optical to 100 GeV. The coordination of pointing Swift with GLAST will be described.

Barthelmy, Scott↗
NASA NTRS2011

Exoplanets, Exo-Solar Life, and Human Significance

With the recent detection of over 500 extrasolar planets, the existence of "other worlds", perhaps even other Earths, is no longer in the realm of science fiction. The study of exoplanets rapidly moved from an activity on the fringe of astronomy to one of the highest priorities of the world's astronomical programs. Actual images of extrasolar planets were revealed over the past two years for the first time. NASA's Hubble Space Telescope is already characterizing the atmospheres of Jupiter-like planets, in other systems. And the recent launch of the NASA Kepler space telescope is enabling the first statistical assessment of how common solar systems like our own really are. As we begin to characterize these "other worlds" and assess their habitability, the question of the significance and uniqueness of life on Earth will impact our society as never before. I will provide a comprehensive overview of the techniques and status of exoplanet detection, followed by reflections as to the societal impact of finding out that Earths are common, or rare. Will finding other potentially habitable planets create another "Copernican Revolution"? Will perceptions of the significance of life on Earth change when we find other Earth-like planets? I will discuss the plans of the scientific community for future telescopes that will be abe to survey our solar neighborhood for Earth-like planets, study their atmospheres, and search for biological signs of life.

Wiseman, Jennifer↗
NASA NTRSDate not supplied

NDE Methods and Capabilities Handbook – Resources for the Composites NDE Community

Composite structures are often difficult to inspect due to the anisotropic nature of the material systems and the range of flaws and defects that can arise in the manufacturing process. NASA’s Advanced Composites Project, a public-private partnership between government, universities and industry, sought to address improved methods, tools, and protocols to reduce the development and certification timeline for composite materials and structures. The rapid inspection of composites was one of the three focused research areas of the project. One deliverable of the project was to develop an NDE Methods and Capabilities Handbook. This Handbook provides a publicly available guidance document that facilitates the selection of appropriate NDE techniques and provides recommended protocols for detecting and characterizing common flaw types in solid laminate carbon fiber reinforced polymer composite (CFRP) structures. The Handbook seeks to reduce the time required to develop qualified inspection processes for composite aircraft structures during the development, certification, and manufacturing phases by providing a reference that helps minimize trial and error and provides guidance on best practices, techniques, and settings, for specific flaw types and geometries. NDE techniques include, but are not limited to ultrasound, laser based ultrasound, infrared thermography, and x-ray CT. Flaw types include, but are not limited to porosity, delamination, voids, AFP defects and impact damage. The Handbook contains details such as inspection parameters, data analysis techniques, inspection efficiency (speed & cost), and limitations. This presentation will describe key Handbook activities with examples of the techniques and flaw types examined by the Advanced Composite Consortium members. Availability of the fabricated NDE standards as well as the raw data collected on the standards by the Consortium members to the NDE community is discussed.

Patricia A Howell↗
NASA NTRS2020

GROWTH on S190814bv: Deep Synoptic Limits on the Optical/Near-infrared Counterpart to a Neutron Star–Black Hole Merger

On 2019 August 14, the Advanced LIGO and Virgo interferometers detected the high-significance gravitational wave (GW) signal S190814bv. The GW data indicated that the event resulted from a neutron star–black hole (NSBH) merger, or potentially a low-mass binary BH merger. Due to the low false-alarm rate and the precise localization (23 deg^(2) at 90%), S190814bv presented the community with the best opportunity yet to directly observe an optical/near-infrared counterpart to an NSBH merger. To search for potential counterparts, the GROWTH Collaboration performed real-time image subtraction on six nights of public Dark Energy Camera images acquired in the 3 weeks following the merger, covering >98% of the localization probability. Using a worldwide network of follow-up facilities, we systematically undertook spectroscopy and imaging of optical counterpart candidates. Combining these data with a photometric redshift catalog, we ruled out each candidate as the counterpart to S190814bv and placed deep, uniform limits on the optical emission associated with S190814bv. For the nearest consistent GW distance, radiative transfer simulations of NSBH mergers constrain the ejecta mass of S190814bv to be M(ej) < 0.04 Mꙩ at polar viewing angles, or M(ej) < 0.03 Mꙩ if the opacity is κ < 2 sq.cm/g. Assuming a tidal deformability for the NS at the high end of the range compatible with GW170817 results, our limits would constrain the BH spin component aligned with the orbital momentum to be χ < 0.7 for mass ratios Q < 6, with weaker constraints for more compact NSs.

Igor Andreoni↗
NASA NTRSDate not supplied

Earth Science and Weather Research: A Satellite’s View of Our Dynamic Planet

The earth and its phenomena affect every aspect of our daily lives. NASA satellite earth observation platforms make it possible for earth scientists to develop detection algorithms, improve prediction, and understand the climatologies of earth phenomena even in places where traditional observations are inconsistent or unavailable, and use these observations to monitor our changing Earth system. NASA is committed to making its data open and accessible to the public. Learn how to access NASA’s earth observation data for your community and around the world, and ways to engage your community to learn more about understanding and conserving our dynamic home planet.

Sarah D Bang↗
NASA NTRS2011

Global Precipitation Measurement, Validation, and Applications Integrated Hydrologic Validation to Improve Physical Precipitation Retrievals for GPM

Land surface modeling and data assimilation can provide dynamic land surface state variables necessary to support physical precipitation retrieval algorithms over land. It is well-known that surface emission, particularly over the range of frequencies to be included in the Global Precipitation Measurement Mission (GPM), is sensitive to land surface states, including soil properties, vegetation type and greenness, soil moisture, surface temperature, and snow cover, density, and grain size. In order to investigate the robustness of both the land surface model states and the microwave emissivity and forward radiative transfer models, we have undertaken a multi-site investigation as part of the NASA Precipitation Measurement Missions (PMM) Land Surface Characterization Working Group. Specifically, we will demonstrate the performance of the Land Information System (LIS; http://lis.gsfc.nasa.gov; Peters-Lidard et aI., 2007; Kumar et al., 2006) coupled to the Joint Center for Satellite Data Assimilation (JCSDA's) Community Radiative Transfer Model (CRTM; Weng, 2007; van Deist, 2009). The land surface is characterized by complex physical/chemical constituents and creates temporally and spatially heterogeneous surface properties in response to microwave radiation scattering. The uncertainties in surface microwave emission (both surface radiative temperature and emissivity) and very low polarization ratio are linked to difficulties in rainfall detection using low-frequency passive microwave sensors (e.g.,Kummerow et al. 2001). Therefore, addressing these issues is of utmost importance for the GPM mission. There are many approaches to parameterizing land surface emission and radiative transfer, some of which have been customized for snow (e.g., the Helsinki University of Technology or HUT radiative transfer model;) and soil moisture (e.g., the Land Surface Microwave Emission Model or LSMEM).

Peters-Lidar, Christa D.↗
NASA NTRS2018

Data Mining for Vortices on the Earth's Magnetosphere - Algorithm Application for Detection and Analysis

Unsteady processes in the solar wind– magnetosphere interaction, such as vortices developed at the magnetopause boundary by the Kelvin–Helmholtz instability, may contribute to the process of mass, momentum and energy transfer into the Earth’s magnetosphere. The research described in this paper validates an algorithm to automatically detect and characterize vortices based on velocity data from simulations. The vortex identification algorithm (VIA) systematically searches the 3-D velocity fields to identify critical points where the magnitude of the velocity vector vanishes. The velocity gradient tensor is computed and its invariants are used to assess vortex structure in the flow field. We use the Community Coordinated Modeling Center (CCMC) Runs on Request capability to create a series of model runs initialized from the conditions observed by the Cluster mission in the Hwang et al. (2011) analysis of Kelvin–Helmholtz vortices observed during southward interplanetary magnetic field (IMF) conditions. We analyze further the properties of the vortices found in the runs, including the velocity changes within their motion across the magnetosheath. We also demonstrate the potential of our tool to identify and characterize other transient features (e.g., flux transfer events, FTEs) with vortical internal structures. We find that the vortices are associated with flows on the magnetosheath side of the magnetopause that reach speeds greater than the solar wind speed at the bow shock.

Collado-Vega, Yaireska M.↗
NASA NTRS2003

Environmental Consequences of an Emerging Biosphere

It seems feasible to detect biological signatures ("biosignatures") in other planetary systems using the tools of astronomy. There are at least two types of biosignatures; spectral and/or polarization features created by biological products, and electromagnetic signals created by technology. The latter example of a biosignature requires SETI-like searches. This presentation addresses only spectral signatures of biological products and properties of habitable planets. Spectral biosignatures are indeed promising targets for near-term exploration. They can arise from organic constituents (e.g., vegetation) and/or inorganic products (e.g., atmospheric O2). Features originating from a planet's surface are likely to be localized in specific regions, whereas gaseous biosignatures can become globally distributed by atmospheric circulation. Biosignatures should be most abundant within environments that are, or once were, habitable. We currently believe that habitable environments necessarily provide Liquid water and biochemically useful energy. However, we do not yet fully comprehend the diversity of features that might arise within these environments that are non-biological in origin, yet mimic biosignatures. For example, atmospheres reflect the events leading to their origins as well as a host of ongoing planetary processes that might include biological activity. We are persuaded that abundant atmospheric oxygen in an environment with abundant liquid water constitutes definitive evidence of life. However, our own early biosphere thrived for more than a billion years in the absence of abundant atmospheric oxygen. The production of other, more reduced, gaseous biomarkers of "young" and/or anaerobic biospheres has not been systematically studied. Biological gas production is strongly controlled by the structure and function of microbial ecosystems. Investigations of microbial ecosystems that are close analogs of ancient communities offer multiple benefits. Such studies can interpret the production of the most important biomarker gases, while simultaneously helping us to understand the formidable array of ecological processes that guided early biological evolution. Astrobiologists must recognize those aspects of biosignatures that truly reflect the most fundamental, and therefore universal, properties of life. We must learn how the environment can modify biosignatures, and how technology can enable an array of biosignatures to be detected remotely within realistic budgetary constraints

DesMarais, David J.↗
NASA NTRSDate not supplied

Optimizing a Small RNAseq Analysis Pipeline for NASA GeneLab Using Open-Source Tools and Libraries

Small RNA sequencing (small RNAseq) is a powerful tool for studying the regulation of gene expression in various organisms. Small RNAseq has been leveraged in space biology research to study how expression of small RNAs, e.g. micro RNAs (miRNAs), small interfering RNAs (siRNAs), and piwi-interacting RNAs (piRNAs), change upon exposure to the space environment. NASA GeneLab currently hosts small RNAseq raw data derived from space-relevant experiments on the Open Science Data Repository (OSDR). To maximize the accessibility of these data to the scientific community, in addition to hosting raw data, which is only interpretable by bioinformaticians, GeneLab plans to process all small RNAseq datasets and make those processed data available to the scientific community via the OSDR. In this study, we present the development of the GeneLab standardized pipeline for processing small RNAseq datasets. Using human, plant, and synthetic small RNAseq datasets, we interrogate various open-source software and publicly available databases to evaluate their accuracy and reproducibility in each step of the pipeline. For quality control and adapter detection and trimming, we evaluated TrimGalore!, FASTX, SeqKit, and DNApi methods to optimize alignment to reference genomes. We compared BWA, Bowtie, and Bowtie2 to determine the optimal alignment tool. For each alignment tool we also assessed various reference databases, including Ensembl reference genomes and different types of small RNA reference databases, including genome, hairpin, and miRNA references from the miRbase and MirGeneDB databases. To quantify the aligned data, we compared SAMtools, HTSeq, and RSEM for counting alignment events from each alignment tool used. Finally, we evaluated various tools, including DESeq2 and EdgeR, for data normalization and subsequent differential expression analysis. We will present the results from our comparative analyses for each pipeline step and propose a consensus pipeline for processing small RNAseq data derived from various organisms exposed to the space environment.

SmallRNAseq, NASA GeneLab, quality control, adapte↗