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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 325 records · Page 18
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Reconstruction of interactions in the ProtoDUNE-SP detector with Pandora

The Pandora Software Development Kit and algorithm libraries provide pattern-recognition logic essential to the reconstruction of particle interactions in liquid argon time projection chamber detectors. Pandora is the primary event reconstruction software used at ProtoDUNE-SP, a prototype for the Deep Underground Neutrino Experiment far detector. ProtoDUNE-SP, located at CERN, is exposed to a charged-particle test beam. This paper gives an overview of the Pandora reconstruction algorithms and how they have been tailored for use at ProtoDUNE-SP. In complex events with numerous cosmic-ray and beam background particles, the simulated reconstruction and identification efficiency for triggered test-beam particles is above 80% for the majority of particle type and beam momentum combinations. Specifically, simulated 1 GeV/c charged pions and protons are correctly reconstructed and identified with efficiencies of 86.1$\pm 0.6$% and 84.1$\pm 0.6$%, respectively. The efficiencies measured for test-beam data are shown to be within 5% of those predicted by the simulation.

43 PARTICLE ACCELERATORS↗
DOE OSTI2018

Customized multi-group cross section generation with NJOY for discrete ordinates X-ray computed tomography and radiography simulation - 25589

The purpose of this work was to explore the creation of photo-atomic multi-group cross section libraries to be used with a software package DOCTORS (Discrete Ordinates Computed Tomography and Radiography Simulator). This software solves the linear Boltzmann equation using the discrete ordinates method. To create these libraries, NJOY2016 was used, creating both fine and broad energy multi-group cross section files. The cross section's accuracy was tested against an equivalent Monte Carlo simulation using MCNP6. Two simulation geometries were used. The first, a cylindrical water phantom with a single source projection placed in front, simulating an X-ray radiography. The second used the same water phantom with 16 cone beam sources placed evenly around the phantom to simulate a computed tomography (CT) scan. The accuracy of the fine energy multi-group cross sections when used in DOCTORS has been verified. The accuracy of the broad energy multigroup cross sections when used in DOCTORS shows that more work must be done before they can be used reliably. (authors)

61 RADIATION PROTECTION AND DOSIMETRY↗
DOE OSTI2021

I/O Bottleneck Detection and Tuning: Connecting the Dots using Interactive Log Analysis

Using parallel file systems efficiently is a tricky problem due to inter-dependencies among multiple layers of I/O software, including high-level I/O libraries (HDF5, netCDF, etc.), MPI-IO, POSIX, and file systems (GPFS, Lustre, etc.). Profiling tools such as Darshan collect traces to help understand the I/O performance behavior. However, there are significant gaps in analyzing the collected traces and then applying tuning options offered by various layers of I/O software. Seeking to connect the dots between I/O bottleneck detection and tuning, we propose DXT Explorer, an interactive log analysis tool. In this paper, we present a case study using our interactive log analysis tool to identify and apply various I/O optimizations. We report an evaluation of performance improvement achieved for four I/O kernels extracted from science applications.

Bez, Jean Luca↗
DOE OSTI2018

Argonne Reactor Code Software Verification and Validation Plan for the Versatile Test Reactor

This Argonne Reactor Code (ARC) software has taken a pivotal role in the design work of the Versatile Test Reactor. The ARC software itself consists of several independent or semiindependent pieces of software that are used in concert to carry out specific analysis and design objectives. In this report, we discuss the validation that is needed for the ARC software overall and discuss available, usable experimental data and how it relates to the VTR project. We also discuss the verification that is required for the ARC software with respect to its usage in the VTR project and give some concrete examples as to what it must accomplish. A list of goals for the verification and validation work are presented as the general procedure that will be implemented for every individual piece of software in ARC. The ARC software has been continuously developed for over 50 years and many of the features used for the VTR project have thus been rigorously tested for accuracy during that timeframe. The ARC software is presently under source code control and undergoes nightly regression testing of not only the individual pieces, but the interconnected aspects that are common to most analysis projects. Its greatest weakness, from a software verification and validation perspective, is both a lack of documentation and outdated documentation. As an example, much of the previous validation work will require contemporary effort to re-evaluate given the updated base data libraries and modifications to the software that have occurred since. This requires new documentation to be produced to support the usage of the software in the VTR project. The bulk of the ARC software is focused on steady state neutronics and TH behavior of a reactor system. In this regard, we have identified the ZPPR, FFTF, and EBR-II programs as the best candidates for sources of validation data for the VTR project. The ZPPR-15 series in the ZPPR program was chosen as it is the best representation of the VTR fuel form and reactor core layout of all of the ZPPR measurements. Additional support for it comes from the fact that most of the data has already been processed into usable ARC models for VTR validation. The FFTF and EBR-II reactors were both functional reactors that provide reactor scale measurements. FFTF is clearly a closer match to VTR and its startup measurements would be a very valuable validation basis. EBR-II has invaluable burnup related measurements that will play a key role in the ARC software validation work. Each piece of ARC software will require a report detailing the software verification. The validation work will be logically split into the results of modeling each identified experimental resource (ZPPR, EBR-II, FFTF). The intended timeline for the VTR project is to have the ARC software verified and validated by the end of fiscal year 2020. This is incumbent on sufficient funding allocated to V&V activities and no change in programmatic priorities.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗
DOE OSTI2013

STAYSL PNNL Suite

The STAYSL PNNL Suite of software provides a set of tools for working with neutron activation rates measured in a nuclear fission reactor, an accelerator-based neutron source, or any neutron field to determine the neutron flux spectrum through a generalized least-squares approach. This process is referred to as neutron spectral adjustment since the preferred approach is to use measured data to adjust neutron spectra provided by neutron physics calculations. The input data consist of the reaction rates based on measured activities, an initial estimate of the neutron flux spectrum, neutron activation cross sections and their associated uncertainties (covariances), and relevant correction factors. The output consists of the adjusted neutron flux spectrum and associated covariance matrix, which is useful for neutron dosimetry and radiation damage calculations. The software suite consists of the STAYSL PNNL, SHIELD, BCF, and NJpp Fortran codes and the SigPhi Calculator spreadsheet tool. In addition, the development of this software suite and associated data libraries used the third-party NJOY99 Fortran code (http://t2.lanl.gov/nis/codes/njoy99/). The NJOY99 and NJpp codes are used to assemble cross section and covariance input data libraries (for both SHIELD and STAYSL PNNL) from the International Reactor Dosimetry File of 2002 (IRDF-2002; http://www-nds.iaea.org/irdf2002/) developed by the Nuclear Data Section of the International Atomic Energy Agency (Vienna, Austria). The BCF, SigPhi Calculator, and SHIELD software tools are used to calculate corrected activation rates and neutron self-shielding correction factors, which are inputs to the STAYSL PNNL code.

Greenwood, L.R.↗
DOE OSTI2013

The antibody mining toolbox: An open source tool for the rapid analysis of antibody repertoires

In vitro selection has been an essential tool in the development of recombinant antibodies against various antigen targets. Deep sequencing has recently been gaining ground as an alternative and valuable method to analyze such antibody selections. The analysis provides a novel and extremely detailed view of selected antibody populations, and allows the identification of specific antibodies using only sequencing data, potentially eliminating the need for expensive and laborious low-throughput screening methods such as enzyme-linked immunosorbant assay. The high cost and the need for bioinformatics experts and powerful computer clusters, however, have limited the general use of deep sequencing in antibody selections. Here, we describe the AbMining ToolBox, an open source software package for the straightforward analysis of antibody libraries sequenced by the three main next generation sequencing platforms (454, Ion Torrent, MiSeq). The ToolBox is able to identify heavy chain CDR3s as effectively as more computationally intense software, and can be easily adapted to analyze other portions of antibody variable genes, as well as the selection outputs of libraries based on different scaffolds. The software runs on all common operating systems (Microsoft Windows, Mac OS X, Linux), on standard personal computers, and sequence analysis of 1–2 million reads can be accomplished in 10–15 min, a fraction of the time of competing software. Use of the ToolBox will allow the average researcher to incorporate deep sequence analysis into routine selections from antibody display libraries.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

Solving a Large Scale Thermal Radiation Problem Using an Interoperable Executive Library Framework on Petascale Supercomputers

We present a novel methodology to compute the transient thermal condi- tion of a set of objects in an open space environment. The governing energy equa- tion and the convective energy transfer are solved by the sparse iterative solvers. The average radiating energy on a set of surfaces is represented by a linear system of the radiosity equations, which is factorized by an out-of-core parallel Cholesky decomposition solver. The coupling and interplay of the direct radiosity solver us- ing GPUs and the CPU-based sparse solver are handled by a light weight software integrator called Interoperable Executive Library (IEL). IEL manages the distribu- tion of data and memory, coordinates communication among parallel processes, and also directs execution of the set of loosely coupled physics tasks as warranted by the thermal condition of the simulated object and its surrounding environment.

Wong, Kwai↗
DOE OSTI2020

Advanced Tri-lab Software Environment (ATSE)

The Advanced Tri-lab Software Environment (ATSE) is an effort to build an open, modular, extensible, community-engaged, and vendor-adaptable software ecosystem that enables the prototyping of new technologies for improving the ASC computing environment. The initial target for ATSE is to accelerate the maturity of the Arm ecosystem for supporting ASC computing and the high-performance computing community more broadly. ATSE provides an integrated and optimized software stack that includes: 1) Application development environment and libraries including compilers, math libraries, tools, MPI, and OpenMP, 2) Low-level system software including optimized Linux, network stack, file systems, containers, and virtual machines, 3) Job scheduling and management including workload manager, application launcher, and user tools, and 4) System administration and management tools supporting booting, monitoring, and operating system image management. SAND2020-12377 M Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Younge, Andrew J.↗
DOE OSTI2019

Fluorescent Amplification of Next Generation Sequencing Libraries Tools (FA-NGS tools) v1

This is a software utility for calculating pooling volumes and graphing quality control data of next generation sequencing libraries amplified with fluorescent intercalating agents and monitored by real-time quantitative PCR (qPCR). The tool is used to calculate pooling volumes of individual next generation sequencing libraries based on experimentally determined fluorescence values. To do this, fluorescent values are used as a proxy for relative concentration to determine the ratio of transfer volumes. The output is a "transfer file" that specifies the transfer volume and destination well of a given library. The tool can also be used to assess the quality of individual next generation sequencing libraries by melting curve analysis. The output are small-multiples graphs of the melting curves of individual sequencing libraries according to the specified plate layout.

Garber, Megan↗
DOE OSTI2022

Assessment of the Phase-to-Ground Fault Apparent Admittance Method with Phase/Ground Boundaries to Detect Types of Electrical Faults for Protective Relays Using Signature Library and Simulated Events

Protective relays in electric power grids recognize the types of electrical faults in a few seconds. The most common detection method to detect the types of electrical faults is based on measuring the angle between the zero and negative sequence currents. However, it is not completely accurate because the phase-to-phase-ground and phase-to-ground electrical faults could have the same detection conditions. Therefore, engineers need to plot the events after an electrical fault to observe the nature of the incidents in detail. In this study, the phase-to-ground fault apparent (PGFA) admittance method with phase/ground boundaries identified the types of electrical faults located in distribution power lines and feeders. This method was based on measuring the PGFA admittance magnitudes for the faulted and nonfaulted phases, resulting in greater than zero and near zero, respectively. The PGFA admittance algorithm was built with MATLAB/Simulink software and tested with signature library and grid simulation events. The PGFA method with phase/ground boundaries was evaluated with the confusion matrix. The measured and predicted values matched in more than 90% of the tests, and the PGFA admittance method with phase/ground boundaries presented an accuracy of 94.3% and a precision of 100%.

42 ENGINEERING↗
DOE OSTI2023

Assessment of the Phase-to-Ground Fault Apparent Admittance Method with Phase/Ground Boundaries to Detect Types of Electrical Faults for Protective Relays Using Signature Library and Simulated Events

Protective relays in electric power grids recognize the types of electrical faults in a few seconds. The most common detection method to detect the types of electrical faults is based on measuring the angle between the zero and negative sequence currents. However, it is not completely accurate because the phase to phase ground and phase to ground electrical faults could have the same detection conditions. Therefore, engineers need to plot the events after an electrical fault to observe the nature of the incidents in detail. In this study, the phase to ground fault apparent (PGFA) admittance method with phase/ground boundaries identified the types of electrical faults located in distribution power lines and feeders. This method was based on measuring the PGFA admittance magnitudes for the faulted and non-faulted phases, resulting in greater than zero and near zero, respectively. The PGFA admittance algorithm was built with MATLAB/ Simulink software and tested with signature library and grid simulation events. The PGFA method with phase/ground boundaries was evaluated with the confusion matrix. The measured and predicted values matched in more than 90% of the tests, and the PGFA admittance method with phase/ground boundaries presented an accuracy of 94.3% and a precision of 100%.

Piesciorovsky, Emilio↗
DOE OSTI2013

From data to analysis: linking NWChem and Avogadro with the syntax and semantics of Chemical Markup Language

Background Multidisciplinary integrated research requires the ability to couple the diverse sets of data obtained from a range of complex experiments and computer simulations. Integrating data requires semantically rich information. In this paper the generation of semantically rich data from the NWChem computational chemistry software is discussed within the Chemical Markup Language (CML) framework. Results The NWChem computational chemistry software has been modified and coupled to the FoX library to write CML compliant XML data files. The FoX library was expanded to represent the lexical input files used by the computational chemistry software. Conclusions The production of CML compliant XML files for the computational chemistry software NWChem can be relatively easily accomplished using the FoX library. A unified computational chemistry or CompChem convention and dictionary needs to be developed through a community-based effort. The long-term goal is to enable a researcher to do Google-style chemistry and physics searches.

Chemical Markup Language, FoX, NWChem, computation↗
DOE OSTI2017

Modeling the direct sun component in buildings using matrix algebraic approaches: Methods and validation

Simulation tools that enable annual energy performance analysis of optically-complex fenestration systems have been widely adopted by the building industry for use in building design, code development, and the development of rating and certification programs for commercially-available shading and daylighting products. The tools rely on a three-phase matrix operation to compute solar heat gains, using as input low-resolution bidirectional scattering distribution function (BSDF) data (10–15° angular resolution; BSDF data define the angle-dependent behavior of light-scattering materials and systems). Measurement standards and product libraries for BSDF data are undergoing development to support solar heat gain calculations. Simulation of other metrics such as discomfort glare, annual solar exposure, and potentially thermal discomfort, however, require algorithms and BSDF input data that more accurately model the spatial distribution of transmitted and reflected irradiance or illuminance from the sun (0.5° resolution). This study describes such algorithms and input data, then validates the tools (i.e., an interpolation tool for measured BSDF data and the five-phase method) through comparisons with ray-tracing simulations and field monitored data from a full-scale testbed. Simulations of daylight-redirecting films, a micro-louvered screen, and venetian blinds using variable resolution, tensor tree BSDF input data derived from interpolated scanning goniophotometer measurements were shown to agree with field monitored data to within 20% for greater than 75% of the measurement period for illuminance-based performance parameters. The three-phase method delivered significantly less accurate results. We discuss the ramifications of these findings on industry and provide recommendations to increase end user awareness of the current limitations of existing software tools and BSDF product libraries.

14 SOLAR ENERGY↗
DOE OSTI2022

Binary-level Software Compatibility Tool Agreement

Application Binary Interface (ABI) compatibility is essential for system or software updates to ensure that libraries continue to function. Tools that can assess a binary or library ABI can thus be used to make predictions about compatibility, and predict downstream bugs by informing developers and users about issues. In this work, we are interested in describing a set of well-known tools for assessing ABI, and testing them in a controlled set experiments to assess tool agreement. We run 7660 smaller experiments across tools (N=30,640 total results) to evaluate not only predictions, but also each tool’s ability to provide detail about underlying issues. In this paper, along with highlighting the problem of assessing ABI compatibility and critiquing the pros and cons of currently available tools, we provide guidance to developers interested to test ABI based on our empirical results and suggestions for future work.

ABI↗
DOE OSTI2019

Modelica Buildings Library Extension for AC and DC Building Comparison (Modelica DC Buildings) v1

This software simulates and compares the losses in AC and DC buildings. It uses formatted load profile data from EnergyPlus, PV generation data from PVWatts, realistic converter efficiency curves based on product data, a battery controller based on excess PV, and a realistic wire model. The software includes Modelica code, which is an extension of the Buildings Library Electrical models. It also includes Python code, which manages the Modelica parametric simulations and plots results.

Gerber, Daniel↗
DOE OSTI2021

Radiological Anomaly Detection And Identification (RADAI) v1.0

The Radiological Anomaly Detection and Identification (RADAI) software package is a python library for implementing, training, and storing algorithms that detect and identify anomalies in gamma-ray spectra. The library defines a general framework for implementing detection (binary) and identification (classification) algorithms, objects to encapsulate the results of analyses, a variety of temporal filtering tools that can be used in constructing algorithms, and conceptual design that allows easy reading and writing of algorithms (and their time dependent state). In addition to this framework, the library includes implementations of a variety of algorithms from the scientific literature including: gross-counts k-sigma, SPRT, N-SCRAD, Region of Interest, and Censored Energy Window. The implementation of these algorithms within the RADAI package was done to facilitate user-initiated training and configuration to by applied to different gamma-ray detector types. Finally, benchmarked and synthetic datasets will be made available for standardized algorithm characterization with corresponding utilities in the RADAI package for data access and processing.

Joshi, Tenzing↗
DOE OSTI2022

Grafana Plugin: Chord Diagram (esnet-chord-diagram) v1

The Esnet chord diagram is a plugin to the open source Grafana platform which lets users create chord diagrams based on data queried from configured data sources. Its designed as a general purpose chord visualization, which we often use internally to show quantitative relationships between network customers. The software itself uses the d3.js library to generate visuals and its primary value is making it easy to use these within Grafana. Graphing library Here: https://github.com/d3/d3-chord ISC License Grafana https://github.com/grafana/grafana AGPL3.0

Balas, Edward↗