Overview of physiological, biochemical, and regulatory aspects of nitrogen fixation in Azotobacter vinelandii
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This paper presents a proposed revision of the International Atomic Energy Agency transport regulations, related to the A 1 and A 2 limit values used to determine the radioactive transport classification. Based on the 'Q system', a novel methodology was introduced to derive Q A and Q B values related to scenarios involving external exposure from a distant source. These values are key parameters that respectively represent the total effective dose and total equivalent dose to the skin, from all primary and secondary particles contributing to radiation exposure. The International Working Group (WG A 1 /A 2 ) is established and associated with the TRANSSC Technical Expert Group on Radiation Protection. A review of the A 1 and A 2 values is performed in response to identified limitations within the existing Q system. The followed approach is based on Monte Carlo simulations that enabled the development of transfer functions aimed at reducing computational time and increasing the flexibility of dose evaluations for any radionuclide with known particle emission spectra. This method allows updating the Q A and Q B values to account for future data evolutions (decay data, fluence-to-dose conversion coefficients) and standardizing the calculation of regulation limits across all referenced radionuclides and scenarios related to external exposure. The transfer functions are established using three Monte Carlo simulation codes—FLUKA, Geant4, and MCNP—and address the previous limitations of the 'Q system', reflecting the latest International Commission for Radiation Protection recommendations and improvements in calculation techniques. The results of the WG show consistent agreement across the codes, with minor discrepancies observed at low primary energies due to statistical uncertainties and different handling of stopping power for electrons/positrons in the codes. This revised approach aligns with current standards and recommendations, ensuring that the radiological consequences of transport accidents are acceptable for the new A 1 and A 2 limits from a radiological protection perspective.
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SUMMARY Carboxysomes are bacterial microcompartments that encapsulate Rubisco and are a core component of the cyanobacterial carbon concentration mechanism (CCM). While carboxysome number, size, and spatial organization vary in different environmental conditions (CO 2 , light availability, redox state, temperature, and light quality), the molecular mechanisms underlying this potentially adaptive process remain elusive. Herein, we observe that mutants of the circadian rhythm/metabolism factor, Regulator of Phycobilisome Association A (RpaA), exhibit a striking breakdown of carboxysomes under certain environmental conditions. We find that conditions leading to overreduction of the plastoquinone (PQ) pool (mixotrophic growth, high irradiance, or chemical inhibition of electron transfer from PQ to the cytochromeb 6 fcomplex) are accompanied by an elevated generation of reactive oxygen species (ROS) and correlate with the loss of carboxysome integrity. Carboxysome breakdown is reversed by environmental conditions or chemical inhibitors that prevent PQ overreduction and accompanying ROS generation. Taken together, our data support a novel link between the redox status of the PQ pool and carboxysome integrity. Our results have implications for the fundamental understanding of cyanobacterial energy‐balancing pathways and may indicate new research directions for understanding how the carboxysome is remodeled in response to changing environments.
Microbial deconstruction of lignocellulose for the production of biofuels and chemicals requires the hydrolysis of heterogeneous hemicelluloses to access the microcrystalline cellulose portion. This work extends previous in vivo and in vitro efforts to characterize hemicellulose utilization by integrating genomic reconstruction, transcriptomic data, operon structures, and biochemical characteristics of key enzymes to understand the deployment and functionality of hemicellulases by the extreme thermophile Caldicellulosiruptor bescii .
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Residing in the 5' untranslated region of the mRNA, the 2'-deoxyguanosine (2'-dG) riboswitch mRNA element adopts an alternative structure upon binding of the 2'-dG molecule, which terminates transcription. RNA conformations are generally strongly affected by positively charged metal ions (especially Mg 2+ ). We have quantitatively explored the combined effect of ligand (2'-dG) and Mg 2+ binding on the energy landscape of the aptamer domain of the 2'-dG riboswitch with both explicit solvent all-atom molecular dynamics simulations (99 μsec aggregate sampling for the study) and selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE) experiments. We show that both ligand and Mg 2+ are required for the stabilization of the aptamer domain; however, the two factors act with different modalities. The addition of Mg 2+ remodels the energy landscape and reduces its frustration by the formation of additional contacts. In contrast, the binding of 2'-dG eliminates the metastable states by nucleating a compact core for the aptamer domain. Mg 2+ ions and ligand binding are required to stabilize the least stable helix, P1 (which needs to unfold to activate the transcription platform), and the riboswitch core formed by the backbone of the P2 and P3 helices. Mg 2+ and ligand also facilitate a more compact structure in the three-way junction region.
This paper provides an overview of lessons learned in applying a dynamic computational framework that links results from a commercially available FOF simulation tool, a commercially available thermal-hydraulic tool, and EMRALD to an operating commercial nuclear power plant. This process of including plant procedures and multiple analysis results is being called Modeling and Analysis for Safety Security using Dynamic EMRALD Framework. It describes how a user could integrate their plant-specific FOF models with safety mitigation actions in EMRALD, and with thermal-hydraulic tools, such as MAAP. The work performed in this paper is based on a generic EMRALD model with actual plant data used for the analysis. However, only the generic model and general results of the analysis are presented for dissemination. No plant’s sensitive information is included in this paper. The discussion shows examples of insights that can be obtained from the proposed methodology.
Photosynthetic organisms have recently gained considerable attention for a role in development of renewable energy sources. Genome-enabled systems biology methods, coupled with functional and synthetic genomics, present opportunities to develop sustainable and economical applications such as fuel production within the next 10 to 15 years. However, optimization of light-driven metabolism for biomass or biofuel production will require a detailed systems biology understanding of photosynthetic processes and cellular metabolism. Genome-scale metabolic models (GEMs) are at the core of systems analysis of cellular processes and form a common organizational framework for analyses of data resulting from functional genomics experimental work and computational studies. Therefore, there is a clear demand for high quality photosynthetic model organisms and the appropriate computational tools that enable systems analysis of light-driven metabolism. Through research conducted we expanded the currently available repertoire of photosynthetic GEMs to include the commercially valuable model diatom Phaeoctylum tricornutum. Diatoms have a peculiar and distinct evolutionary footprint and represent a major eukaryotic lineage that is taxonomically and functionally distinct from green and red algae and vascular plants. Therefore, the true potential for light-driven metabolism aimed at biofuel production remains poorly understood at a systems level for a large subset of the global diversity of photosynthetic organisms. The metabolic capabilities of P. tricornutum were comparatively modeled with those from other photosynthetic groups in order to elucidate the occurrence of metabolic traits within and between phototrophs. Additionally, this research resulted in significant extension of the COnstraints Based Reconstruction and Analysis (COBRA) Toolbox to accommodate the crucial need for infrastructure required for ‘omics data integration and analysis in the context of genome-scale models. Therefore, the proposed research achieved two important goals. First, within the broad scope of photosynthetic organisms, we functionally compared and, as a result, identified cellular processes that require optimization in order to enable deployment as biofuel feedstock. Second, the proposed research resulted in development of key computational infrastructure, which can be further extended to other biological systems, that is currently lacking but necessary for multiple ‘omics data integration.
This report presents the proceedings and lessons learned at a conference workshop that discussed the role of energy storage in supporting electric system resilience, which took place at the Natural Energy Laboratory of Hawaii Authority’s (NELHA) Conference on Energy Storage Trends and Opportunities in December 2018. Staff from the Pacific Northwest National Laboratory (PNNL) made two presentations on the topic of resilience: the first covering a conceptual framework for incorporating resilience into resource planning processes, and the second covering a tool developed for microgrid planning that can assist in identifying resource mixes that will meet site-specific resilience needs. Throughout the presentations, presenters and workshop participants discussed the obstacles to improving electric system resilience and potential solutions for overcoming them. Following the workshop, the authors conducted additional research to further contextualize the topics discussed at the workshop and to frame the resulting recommendations for future engagement on this subject by the Department of Energy and the national laboratories.
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New microreactors must comply with the Material Control and Accounting (MC&A) regulations in 10CFR74. The objective of MC&A is to verify that the nuclear material is not stolen or diverted to unauthorized users. Microreactors have unique features which pose new challenges to addressing these regulations. This work considers general approaches and methods for microreactor MC&A based on the reactor life cycles which have been proposed by microreactor vendors. One key aspect of MC&A is measurement of the nuclear material. Measurement of microreactor fuel could be especially important because the cores may be sealed for up to 20 years, preventing direct visual confirmation. Measurements could also be especially challenging due to the thick shielding designed around microreactors. This work evaluates a range of techniques used in medical, industrial, and nuclear fields. The cost, time, and performance of the techniques were estimated. Finally, for a promising technique of using in-core neutron detectors, the feasibility was analyzed in detail.
The ongoing trend of coal retirements has disproportionately affected the socioeconomic health of communities where power plants are located. For many public utility commissions, these impacts have led to important questions around the scope of PUCs’ statutory authority to analyze, consider and mitigate losses to host communities within their role as utility regulators. Due largely to variations in state legislative charges, commissions have taken different approaches to articulating what lies within the public interest.This report examines the authority of PUCs across the country to consider non-energy economic impacts beyond direct ratepayer effects, and summarizes approaches that PUCs, utilities and other stakeholders have used to mitigate the economic fallout of coal retirements, specifically.
Presentation to be submitted to the Institute of Nuclear Materials Management (INMM) for presentation during the INMM 63rd Annual Meeting, July 24–28, 2022, https://inmm.org/mpage/INMM22.
Increasing energy efficiency is ubiquitous in many economies, and several mechanisms for achieving this increase, from mandatory policies to voluntary initiatives, have been proposed and implemented. In the United States, the Department of Energy, during the development of its energy conservation standard rules, evaluates the benefits from several of these mechanisms. In this report, we review how estimates of benefits from two types of voluntary energy efficiency initiatives – rebates and voluntary energy efficiency targets (VETs) – compare to the same benefits estimated for minimum energy efficiency standards (MEPS) established in the United States for residential appliances, commercial and industrial equipment, and lighting applications (referred to simply as “products” for the remainder of this report) between 2010 and 2020. Our results show that, overall, these two voluntary measures are estimated to provide, altogether, 36% of the total energy savings estimated to be provided by new efficiency standards, with a total net-present value that corresponds to 52% of the net-present value estimated for standards. When considering all energy conservation rules reviewed in this report, the energy savings a rebate program is estimated to achieve ranges from less than 1% to 86% of the savings from new standards set for the same type of product and at the same level of energy efficiency. As for VETs, the energy savings range from less than 1% to 78% of the savings from standards. Results vary widely across types of products due to (a) the relevance of the monetary incentive relative to incremental upfront costs considered for each type of product, and (b) the estimated level of market barriers associated with each type of product. While voluntary energy efficiency initiatives are not as effective as MEPS in transforming the market and raising the bar of energy efficiency for energy consuming goods in an economy, when applied in tandem with MEPS they can be powerful instruments for promoting and increasing energy efficiency in the economy.
Nuclear forensics is the collection and analysis of nuclear or radiological material to support investigations into the diversion, trafficking, or illicit activities involving materials. The goal is to link nuclear or radioactive material to people, processes, events and/or locations.