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At least 325 records · Page 18

Sequencing and analysis of 131 SARS-CoV-2 isolates in previously sampled and unsampled regions of Jordan from 2020 to 2023

The Hashemite Kingdom of Jordan remains an understudied country for next generation sequencing analysis of SARS-CoV-2 genomes collected during the 2019 pandemic. Here we provide 131 additional reference genomes collected between 2020–2023 from SARS-CoV-2-positive patients across Jordan. Phylogenetic analysis supports existing pandemic narratives of changing clade dominance over time and adds genomes in novel Jordanian locations and timepoints to make Jordan SARS-CoV-2 databases more comprehensive. Samples from the less-sequenced cities of Ajloun, Jaresh, Karak, and Madaba identified previously unreported lineages while Amman, Irbid, and Zarqa have existing sequencing efforts bolstered. Despite many incomplete patient records and a relatively small sample size, we observe interesting symptom patterns that support existing global and Jordanian pandemic narratives. We note how in-country COVID-19 pandemic genomic studies showcase Jordan’s efforts to expand next generation sequencing capabilities, especially through the leveraging of EDGE COVID-19, a bioinformatics platform for performing rapid, batched analysis of SARS-CoV-2 sequencing that streamlines sample processing prepared from a network of hospital locations.

60 APPLIED LIFE SCIENCES↗

Analysis of the Sludge Batch 7b (Macrobatch 9) DWPF Pour Stream Glass Sample

The Defense Waste Processing Facility (DWPF) began processing Sludge Batch 7b (SB7b), also referred to as Macrobatch 9 (MB9), in January 2012. SB7b is a blend of the heel of Tank 40 from Sludge Batch 7a (SB7a) and the SB7b material that was transferred to Tank 40 from Tank 51. SB7b was processed using Frit 418.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Sampling of Silicon Powder for Impurity Analysis

Electron beam forms dense pellets of powdered silicon for Zeeman analysis. Sampling method focuses electron beam on submicron silicon powder. Process enhances quality control in production of low-cost silicon powder for semiconductor industry.

Yamakawa, K. A.↗

Lunar sample analysis

Recent results on the antarctic meteorite ALPHA 77003 which contribute to understanding the alteration processes which produced matrix in unequilibrated chondrites are presented. Also included are additional scanning electron microscope results confirming that the matrix in Allende was formed by in situ alteration.

Housley, R. M.↗

Xylan - A potential contaminant for lunar samples and Antarctic meteorites

The possibility that lunar samples have been contaminated by the proprietary lubricant paint known as Xylan, which has been applied to screw threads in dry-N sample processing cabinets at NASA JSC, is considered. From a sample analysis using sealed-tube and stepped combustion, it is argued that the unexpectedly high concentration of organic materials found in EET A79001 is not due to Xylan contamination. It is considered unlikely that previous C and N analyses of lunar samples have been affected by the introduction of Xylan.

Wright, I. P.↗

Lock detection in Costas loops

Previous analyses of lock detector algorithms for Costas loops have ignored the effects of the inherent correlation between samples of the phase error process. In this paper, both analysis and simulations are used to quantify the effects of phase correlation on lock detection for the 'square law' and 'absolute value' type detectors. Results are obtained which depict the lock detection probability as a function of loop signal-to-noise ratio for a given false alarm rate. It is shown that the square law detector experiences less degradation due to phase jitter than the absolute value detector and that the degradation in detector signal-to-noise ratio is more pronounced for squarewave than for sinewave signals.

Mileant, A.↗

[Effects of Gravity on Attachment of Tendon to Bone]

We have received and processed all samples for either light or scanning electron microscopic analysis and have completed the histomorphometric analysis. We have characterized the changes caused by spaceflight to tendon attachments to the calcaneus, tibia, fibula and femur and compared them to hindlimbs and forelimbs from NIH.RZ. Soleus muscle histomorphometry has also been completed. Our results suggest severe osteoporosis in the femur, fibula and tibia of animals coincident to spaceflight, which had not resolved after 4-5 days following return to earth. This was evident at all sites, including sites of tendon attachments. This atrophy was not evident in the calcaneus. No muscle atrophy was evident. Comparison of scanning photomicrographs of flight animals with other lactating animals demonstrated structural similarities and suggested that it might be worthwhile to assess whether lactation is a factor in development of the osteoporosis in the spaceflight animals. In addition, evaluation of total calcium utilization by spaceflight animals would be beneficial.

Johnson, Roger B.↗

Multi-Scale Analysis of an Ilmenite Microcrater in Lunar Sample 71055

Micrometeorite impacts are a key space weathering process on the lunar surface, generating a variety of physical and chemical changes in the lunar regolith. Several experiments using nanosecond pulsed lasers to simulate micrometeorite impact have been published in the past two decades, providing a wealth of knowledge, including how minerals vary in their response to laser irradiation. Although these experiments have produced many features analogous to those observed in natural samples, none could be attributed to the passage of a shock wave, resulting instead from hot ablation. Recent femtosecond laser irradiation of olivine and enstatite have more accurately reproduced the shock textures observed in lunar samples, improving our ability to coordinate experimental and lunar sample data. Both pulsed laser experiments and studies of lunar impact craters have focused on silicates, as they comprise the bulk of the regolith. Ilmenite (FeTiO 3 ) is the most abundant opaque mineral in lunar rocks and an important sink of solar wind implanted helium. Ilmenite is known to vary in its response to radiation processing relative to the silicates, but its response to micrometeorite impact has not yet been studied in natural samples nor in the laboratory. In this investigation, we characterize an ilmenite microcrater using scanning electron microscopy (SEM) and transmission electron microscopy (TEM) to learn how ilmenite responds to impact and if there are implications for helium cycling in the regolith.

B A Cymes↗

Microfluidic-Based sample chips for radioactive solutions

Historical nuclear fuel cycle process sampling techniques required sample volumes ranging in the tens of milliliters. The radiation levels experienced by analytical personnel and equipment, in addition to the waste volumes generated from analysis of these samples, have been significant. These sample volumes also impacted accountability inventories of required analytes during process operations. To mitigate radiation dose and other issues associated with the historically larger sample volumes, a microcapillary sample chip was chosen for further investigation. The ability to obtain microliter volume samples coupled with a remote automated means of sample loading, tracking, and transporting to the analytical instrument would greatly improve analytical efficiency while reducing both personnel exposure and radioactive waste volumes. Sample chip testing was completed to determine the accuracy, repeatability, and issues associated with the use of microfluidic sample chips used to supply µL sample volumes of lanthanide analytes dissolved in nitric acid for introduction to an analytical instrument for elemental analysis.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Microfluidic-Based Sample Chips for Radioactive Solutions

Historical nuclear fuel cycle process sampling techniques required sample volumes ranging in the tens of milliliters. The radiation levels experienced by analytical personnel and equipment, in addition to the waste volumes generated from analysis of these samples, have been significant. These sample volumes also impacted accountability inventories of required analytes during process operations. To mitigate radiation dose and other issues associated with the historically larger sample volumes, a microcapillary sample chip was chosen for further investigation. The ability to obtain microliter volume samples coupled with a remote automated means of sample loading, tracking, and transporting to the analytical instrument would greatly improve analytical efficiency while reducing both personnel exposure and radioactive waste volumes. Sample chip testing was completed to determine the accuracy, repeatability, and issues associated with the use of microfluidic sample chips used to supply µL sample volumes of lanthanide analytes dissolved in nitric acid for introduction to an analytical instrument for elemental analysis.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Summary Report for the Analysis of the Sludge Batch 8 (Macrobatch 10) DWPF Pour Stream Glass Sample

In order to comply with the Defense Waste Processing Facility (DWPF) Waste Form Compliance Plan for Sludge Batch 8, Savannah River National Laboratory (SRNL) personnel characterized a pour stream sample that was collected while canister S04274 was being filled. This report summarizes the results of the compositional analysis for reportable oxides and radionuclides, and the normalized Product Consistency Test (PCT) results. The PCT responses indicate that the DWPF produced glass is significantly more durable than the Environmental Assessment glass. Results and further details are documented in SRNL-STI-2018- 00699, “Analysis of the Sludge Batch 8 (Macrobatch 10) DWPF Pour Stream Glass Sample.”

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Experimental Study of Structural and Magnetic Properties of LaNi{sub 5} and MmNi{sub 4.7}Al{sub 0.3} Hydrogen Storage Alloys

This study deals with an experimental investigation of structural and magnetic properties of LaNi{sub 5} and MmNi{sub 4.7}Al{sub 0.3} (Mm consists of 66.6 wt% Ce and 33.3 wt% La) hydrogen storage alloys. LaNi{sub 5} and MmNi{sub 4.7}Al{sub 0.3} alloys were prepared by vacuum induction melting method and then hydrogenated under 50 bar hydrogen gas pressure. The structure of the samples, before and after hydrogenation, was probed by X-ray diffraction (XRD) analysis which showed that all the samples have a single phase hexagonal crystal structure (CaCu5-type). Then X-ray fluorescence (XRF) measurement was used to investigate the chemical compound of the as-prepared samples. The study of the magnetic properties of samples indicated that the as-prepared alloys are weakly ferromagnetic or paramagnetic, while the hydrogenation process causes ferromagnetic behavior of samples to intensify. Honda-Arrott plot analysis exhibited that substitution of Al for Ni and Ce for La in the as-prepared samples reduces the magnetic susceptibility from 4.8 × 10{sup −6} to 3.06 × 10{sup −6} emu/gOe. Magnetic anisotropy of the hydrogenated samples in a high magnetic field was studied using the law of approach to saturation. The results indicated that the magnetic anisotropy and anisotropy field increase by the replacement of Ni and La with Al and Ce respectively.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Analysis of the sludge batch 9 (Macrobatch 10) DWPF pour stream glass sample

A pour stream (PS) sample taken during processing of Sludge Batch 8 (SB8, Macrobatch 10) was analyzed by Savannah River National Laboratory (SRNL) to verify compliance with the Defense Waste Processing Facility (DWPF) Glass Product Control Program. The following conclusions were drawn from these analyses; The sum of oxides for the SB8 PS glass (97.41 wt%) is within the Product Composition Control System (PCCS) limits (100 ± 5 wt%); The average Waste Dilution Factor (WDF) calculated from the Tank 40 dried sludge analysis results for SB8 is 1.9 ± 0.1. In general, the radionuclide concentration of the SB8 PS glass sample calculated using this WDF is in good agreement with the measured radionuclide content; The Product Consistency Test (PCT) results indicate that the SB8 PS glass meets the Waste Acceptance Product Specifications (WAPS) for durability, with normalized release rates for boron, lithium and sodium all at least two standard deviations lower than those of the Environmental Assessment (EA) glass; The average measured density of the SB8 PS glass is 2.72 g/cm 3 , consistent with previous PS samples; and, The average measured Fe 2+ /ΣFe ratio of the SB8 PS glass is 0.15, within the target range of 0.09- 0.33, and closely resembling the predicted REDOX value of 0.15.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Characterization of the SRNL-Washed tank 51 sludge batch 9 qualification sample

Savannah River National Laboratory (SRNL) personnel have been requested to qualify the next sludge batch (Sludge Batch 9 – SB9) for processing at the Defense Waste Processing Facility (DWPF). To accomplish this task, Savannah River Remediation (SRR) sent SRNL a 3-L sample of Tank 51H slurry to be characterized, washed, and then used in a lab-scale demonstration of the DWPF flowsheet (after combining with Tank 40H sludge). SRNL has washed the Tank 51H sample per the Tank Farm washing strategy as of October 20, 2015. A part of the qualification process is extensive radionuclide and chemical characterization of the SRNL-washed Tank 51H slurry. This report documents the chemical characterization of the washed slurry; radiological characterization is in progress and will be documented in a separate report. The analytical results of this characterization are comparable to the Tank Farm projections. Therefore, it is recommended that SRNL use this washed slurry for the ongoing SB9 qualification activities.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Aeroelastic Uncertainty Quantification Studies Using the S4T Wind Tunnel Model

This paper originates from the joint efforts of an aeroelastic study team in the Applied Vehicle Technology Panel from NATO Science and Technology Organization, with the Task Group number AVT-191, titled "Application of Sensitivity Analysis and Uncertainty Quantification to Military Vehicle Design." We present aeroelastic uncertainty quantification studies using the SemiSpan Supersonic Transport wind tunnel model at the NASA Langley Research Center. The aeroelastic study team decided treat both structural and aerodynamic input parameters as uncertain and represent them as samples drawn from statistical distributions, propagating them through aeroelastic analysis frameworks. Uncertainty quantification processes require many function evaluations to asses the impact of variations in numerous parameters on the vehicle characteristics, rapidly increasing the computational time requirement relative to that required to assess a system deterministically. The increased computational time is particularly prohibitive if high-fidelity analyses are employed. As a remedy, the Istanbul Technical University team employed an Euler solver in an aeroelastic analysis framework, and implemented reduced order modeling with Polynomial Chaos Expansion and Proper Orthogonal Decomposition to perform the uncertainty propagation. The NASA team chose to reduce the prohibitive computational time by employing linear solution processes. The NASA team also focused on determining input sample distributions.

Nikbay, Melike↗

Toward Unified Autonomous Scattering Experiments: A Cross-Facility Case Study at ALS and PETRA III

Autonomous experiments rely on the integration of control, data acquisition, analysis, and decision-making frameworks. While such systems have been demonstrated at individual facilities, adapting them to additional instruments remains challenging due to differences in local infrastructure. We present a modular workflow that connects existing open-source tools for data access (Tiled), workflow orchestration (Prefect), analysis and visualization (pyFAI, Plotly Dash), and Gaussian-process-based adaptive sampling (gpCAM) into a unified framework for autonomous scattering experiments. The same configuration operates across two synchrotron beamlines (ALS 7.3.3 and PETRA III P03) with only minimal facility-specific adjustments, as shown in proof-of-concept demonstrations. This validates that a consistent design emphasizing modularity and shared interfaces can ease deployment across diverse experimental environments. The resulting framework provides a flexible foundation for extending autonomous control and analysis capabilities beyond a single beamline or instrument.

47 OTHER INSTRUMENTATION↗