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At least 325 records · Page 18

Synchronization of dust acoustic waves in a forced Korteweg–de Vries–Burgers model

The synchronization of dust acoustic waves to an external periodic source is studied in the framework of a driven Korteweg–de Vries–Burgers equation that takes into account the appropriate nonlinear and dispersive nature of low-frequency waves in a dusty plasma medium. For a spatiotemporally varying source term, the system is shown to demonstrate harmonic (1:1) and superharmonic (1:2) synchronized states. Here, the existence domains of these states are delineated in the form of Arnold tongue diagrams in the parametric space of the forcing amplitude and forcing frequency and their resemblance to some past experimental results is discussed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Detection of Hole Pockets in the Candidate Type-II Weyl Semimetal MoTe 2 from Shubnikov-de Haas Quantum Oscillations

We report the bulk electronic structure of T d -MoTe 2 features large hole Fermi pockets at the Brillouin zone center (Γ) and two electron Fermi surfaces along the Γ-X direction. However, the large hole pockets, whose existence has important implications for the Weyl physics of T d -MoTe 2 , has never been conclusively detected in quantum oscillations. This raises doubt about the realizability of Majorana states in T d -MoTe 2 , because these exotic states rely on the existence of Weyl points, which originated from the same band structure predicted by density functional theory (DFT). Here, we report an unambiguous detection of these elusive hole pockets via Shubnikov–de Haas (SdH) quantum oscillations. At ambient pressure, the quantum oscillation frequencies for these pockets are 988 and 1513 T, when the magnetic field is applied along the c axis. The quasiparticle effective masses m* associated with these frequencies are 1.50 and 2.77 m e , respectively, indicating the importance of Coulomb interactions in this system. We further measure the SdH oscillations under pressure. At 13 kbar, we detected a peak at 1798 T with m* = 2.86 m e . Relative to the oscillation data at a lower pressure, the amplitude of this peak experienced an enhancement, which can be attributed to the reduced curvature of the hole pockets under pressure. Combining our experimental data with DFT +U calculations, where U is the Hubbard parameter, our results shed light on why these important hole pockets have not been detected until now.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

CodEx: A Modular Framework for Joint Temporal De-Blurring and Tomographic Reconstruction

In many computed tomography (CT) imaging applications, it is important to rapidly collect data from an object that is moving or changing with time. Tomographic acquisition is generally assumed to be step-and-shoot, where the object is rotated to each desired angle, and a view is taken. However, step-and-shoot acquisition is slow and can waste photons, so in practice fly-scanning is done where the object is continuously rotated while collecting data. However, this can result in motion-blurred views and consequently reconstructions with severe motion artifacts. In this paper, we introduce CodEx, a modular framework for joint de-blurring and tomographic reconstruction that can effectively invert the motion blur introduced in sparse view fly-scanning. The method is a synergistic combination of a novel acquisition method with a novel non-convex Bayesian reconstruction algorithm. CodEx works by encoding the acquisition with a known binary code that the reconstruction algorithm then inverts. Using a well chosen binary code to encode the measurements can improve the accuracy of the inversion process. The CodEx reconstruction method uses the alternating direction method of multipliers (ADMM) to split the inverse problem into iterative deblurring and reconstruction sub-problems, making reconstruction practical to implement. Here we present reconstruction results on both simulated and binned experimental data to demonstrate the effectiveness of our method.

42 ENGINEERING↗

ForceGen: End-to-end de novo protein generation based on nonlinear mechanical unfolding responses using a language diffusion model

Through evolution, nature has presented a set of remarkable protein materials, including elastins, silks, keratins and collagens with superior mechanical performances that play crucial roles in mechanobiology. However, going beyond natural designs to discover proteins that meet specified mechanical properties remains challenging. Here, we report a generative model that predicts protein designs to meet complex nonlinear mechanical property-design objectives. Our model leverages deep knowledge on protein sequences from a pretrained protein language model and maps mechanical unfolding responses to create proteins. Via full-atom molecular simulations for direct validation, we demonstrate that the designed proteins are de novo, and fulfill the targeted mechanical properties, including unfolding energy and mechanical strength, as well as the detailed unfolding force-separation curves. Our model offers rapid pathways to explore the enormous mechanobiological protein sequence space unconstrained by biological synthesis, using mechanical features as the target to enable the discovery of protein materials with superior mechanical properties.

59 BASIC BIOLOGICAL SCIENCES↗

Mechanical and Thermal Forcing for Upslope Flows and Cumulus Convection over the Sierras de Córdoba

Abstract The upslope flow processes affecting the vertical extent of orographic cumulus convection are examined using observations from the Cloud, Aerosol, and Complex Terrain Interactions (CACTI) field campaign. Specifically, clear air returns from the U.S. Department of Energy (DOE) second-generation C-band scanning Atmospheric Radiation Measurement (ARM) precipitation radar (CSAPR2) are used to characterize the structure and variability of the ridge-normal (i.e., up/downslope) flow components, which transport mass to the crest of Argentina’s Sierras de Córdoba and contribute to convective initiation. Data are compiled for the entire CACTI period (October–April), including days with clear skies, shallow cumuli, cumulus congestus, and deep convection. To examine shared variability among >70 000 radar scans, we use (i) a principal component analysis (PCA) to isolate modes of variability in the upslope flow and (ii) composite analysis based on convective outcomes, determined from GOES-16 satellite observations. These data are contextualized with observed surface sensible heat fluxes, thermodynamic profiles, and synoptic-scale analysis. Results indicate distinct thermally and mechanically forced upslope flow modes, modulated by diurnal heating and synoptic-scale variations, respectively. In some instances, there is a superposition of thermal and mechanical forcing, yielding either deeper or shallower upslope flow. The composite analyses based on satellite data show that successively deeper convective outcomes are associated with successively deeper upslope flow layers that more readily transport mass to the ridge crest in conjunction with lower lifting condensation levels, facilitating convective initiation. These results help to isolate the forcing mechanisms for orographic convection and thus provide a foundation for parameterizing orographic convective processes in coarse resolution models.

Meteorology & Atmospheric Sciences↗

dGPredictor: Automated fragmentation method for metabolic reaction free energy prediction and de novo pathway design

Group contribution (GC) methods are conventionally used in thermodynamics analysis of metabolic pathways to estimate the standard Gibbs energy change ( Δ r G ′ o ) of enzymatic reactions from limited experimental measurements. However, these methods are limited by their dependence on manually curated groups and inability to capture stereochemical information, leading to low reaction coverage. Herein, we introduce an automated molecular fingerprint-based thermodynamic analysis tool called dGPredictor that enables the consideration of stereochemistry within metabolite structures and thus increases reaction coverage. dGPredictor has comparable prediction accuracy compared to existing GC methods and can capture Gibbs energy changes for isomerase and transferase reactions, which exhibit no overall group changes. We also demonstrate dGPredictor’s ability to predict the Gibbs energy change for novel reactions and seamless integration within de novo metabolic pathway design tools such as novoStoic for safeguarding against the inclusion of reaction steps with infeasible directionalities. To facilitate easy access to dGPredictor, we developed a graphical user interface to predict the standard Gibbs energy change for reactions at various pH and ionic strengths. The tool allows customized user input of known metabolites as KEGG IDs and novel metabolites as InChI strings ( https://github.com/maranasgroup/dGPredictor ).

59 BASIC BIOLOGICAL SCIENCES↗

Raw soil carbon dioxide, moisture, temperature and micrometeorological data in the East River Watershed, Colorado June 2021-June 2024. (DE-SC0021139)

This dataset contains raw data from four tripod stations along an elevation gradient on Snodgrass Mountain in the East River Watershed, CO, USA. Each station contains a datalogger connected to 3 soil Carbon Dioxide CO2 gas probes, 3 soil temperature/moisture sensors and a micrometeorological station. Sensors are scanned every minute, and the 30 minute average is reported. The file snodgrass_soil_ESS.csv contains raw data, a row of column descriptors, and units of measurements. some data processing and QA/QC was done to filter out data from sensors that went bad and extreme outliers. CO2 sensors that went bad were replaced with new sensors as soon as possible. This research was performed to investigate the ecohydrological linkages of belowground carbon processes in the East River watershed forested communities to better understand how these ecosystems will respond to a changing cold-season moisture input. This is the second version of this data set and was modified on 10/01/2024. The primary change in the data was the addition of data from the fall of 2022 to June of 2024. In addition, minor QA/QC was done to filter out data from sensors that went bad and extreme outliers. THe filtered data are now NA's in this data frame and primarily the CO2 sensors. Limited to no QA/QC has been done on the other environmental data. This is now the third version of the data set, and was modified 03/25/2026. The primary change in the data was the addition of data from the June of 2024 to December 2025. Further r QA/QC was done with the new data to filter out bad data from faulty sensors and extreme outliers. The filtered data are now NA's in this data frame and primarily the CO2 sensors. Limited to no QA/QC has been done on the other environmental data. ##This additional data was funded under DE-SC0024218( Responses of Plant and Microbial Respiration Sources to Changing Cold Season Climate Drivers in the East River Watershed)

54 ENVIRONMENTAL SCIENCES↗

Is Mini Beam Ready for Human Trials? Results of Randomized Study of Treating De-Novo Brain Tumors in Canines Using Linear Accelerator Generated Mini Beams

The main challenge in treating malignant brain neoplasms lies in eradicating the tumor while minimizing treatmentrelated damage. Conventional radiation treatments are associated with considerable side effects. Synchrotron generated micro-beam radiation (SMBRT) has shown to preserve brain architecture while killing tumor cells, however physical characteristics and limited facility access restrict its use. We have created a new clinical device which produces mini beams on a linear accelerator, to provide a new type of treatment called mini-beam radiation therapy (MBRT). The objective of this study is to compare the treatment outcomes of linear accelerator based MBRT versus standard radiation treatment (SRT), to evaluate the tumor response and the treatment-related changes in the normal brain with respect to each treatment type. Pet dogs with de-novo brain tumors were accrued for treatment. Dogs were randomized between standard fractionated stereotactic (9 Gy in 3 fractions) radiation treatment vs. a single fraction of MBRT (26 Gy mean dose). Dogs were monitored after treatment for clinical assessment and imaging. When the dogs were euthanized, a veterinary pathologist assessed the radiation changes and tumor response. We accrued 16 dogs, 8 dogs in each treatment arm. In the MBRT arm, 71% dogs achieved complete pathological remission. The radiation-related changes were all confined to the target region. Structural damage was not observed in the beam path outside of the target region. In contrast, none of the dogs in control group achieved remission and the treatment related damage was more extensive. Therapeutic superiority was observed with MBRT, including both tumor control and the normal structural preservation. The MBRT findings are suggestive of an immune related mechanism which is absent in standard treatment. These findings together with the widespread availability of clinical linear accelerators make MBRT a promising research topic to explore further treatment and clinical trial opportunities.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

DE-FE0029488 - North Dakota Integrated Carbon Capture and Storage Complex Feasibility Study Public Data

Data from award DE-FE0029488 - North Dakota Integrated Carbon Capture and Storage Complex Feasibility Study performed by the Energy & Environmental Research Center including the following: - 2D Seismic {Input data, sgy files, maps, logs, and descriptors} - Core Petrophysics {Core analysis of plugs from the two stratigraphic test wells (Flemmer-1 [API 33-057-00039] and BNI-1 [API 33-065-00018])} - North Dakota Oil and Gas File No 37380 Files - North Dakota Oil and Gas File No 37672 Files - Well Testing Data {Summary of well testing methods and results from the stratigraphic test wells (Flemmer-1 and BNI-1)} Additional References: https://www.netl.doe.gov/sites/default/files/2017-12/Wesley-Peck-_Mastering-the-Subsurface_CarbonSAFE-Phase-II_August-2017-final.pdf Peck, W.D., Ayash, S.C., Klapperich, R.J., Gorecki, C.D. (2019) The North Dakota integrated carbon storage complex feasibility study, International Journal of Greenhouse Gas Control, Volume 84, 2019, Pages 47-53, https://doi.org/10.1016/j.ijggc.2019.03.001

Carbon Storage↗

Real-Time Edge AI for Distributed Systems (READS): Progress on Beam Loss De-Blending for the Fermilab Main Injector and Recycler

The Fermilab Main Injector enclosure houses two accelerators, the Main Injector and Recycler. During normal operation, high intensity proton beams exist simultaneously in both. The two accelerators share the same beam loss monitors (BLM) and monitoring system. Beam losses in the Main Injector enclosure are monitored for tuning the accelerators and machine protection. Losses are currently attributed to a specific machine based on timing. However, this method alone is insufficient and often inaccurate, resulting in more difficult machine tuning and unnecessary machine downtime. Machine experts can often distinguish the correct source of beam loss. This suggests a machine learning (ML) model may be producible to help de-blend losses between machines. Work is underway as part of the Fermilab Real-time Edge AI for Distributed Systems Project (READS) to develop a ML empowered system that collects streamed BLM data and additional machine readings to infer in real-time, which machine generated beam loss.

43 PARTICLE ACCELERATORS↗

Final-Technical Report for DE-FG02-98ER14888

This report describes the history and accomplishments of DE-FG02-98ER14888. The project focuses on synthesis and characterization of self-assembled ionophores for remediation and separation of various cations and anions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Reduced Neutralization Feasibility Study for H-Canyon Accelerated Basin De- Inventory (ABD) Program

An alternative approach to Spent Nuclear Fuel (SNF) and Nuclear Material Processing was developed for future H-Canyon (HCAN) and L-Area operations that involves a paradigm shift from current HCAN, Concentrate, Storage, and Transfer Facility (CSTF), and Defense Waste Processing Facility (DWPF) operations. The alternative, referred to as Accelerated Basin De-inventory (ABD), requires that all Domestic and Foreign Research Reactor SNF currently at the Savannah River Site (SRS) will be dissolved, stored, and then transferred to CSTF without recovery of Highly Enriched Uranium (HEU). Concentrated nitric acid is utilized to dissolve aluminum spent nuclear fuel (ASNF) in HCAN. The vessels and piping in HCAN are fabricated from 304L stainless steel and are ideally suited to handle the acidic waste stream. However, as the waste is transferred to the CSTF and DWPF, it will contact the carbon steel waste tanks in CSTF. In order to prevent corrosion of the carbon steel, the acidic waste is neutralized (i.e., pH adjusted over 11) by the addition of sodium hydroxide (NaOH). The NaOH is added until the final solution contains 1.2 M excess -OH. Additionally, if the waste is not neutralized to a pH greater than 11, then aluminum hydroxide (Al(OH) 3 ) would form, and solids may form in the piping as it is transferred to CSTF. This document presents an analysis of the influence of reducing the excess caustic that is added to the neutralization tanks on the corrosion protection scheme primarily for the CSTF waste tanks. The implications to HCAN and DWPF were also assessed.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Closeout of Department of Energy Grant – DE-FG02-91CH10493

A Federal Facility Interagency Agreement (lAG), dated February 28,1992, was executed by the State of New York, U.S. Environmental Protection Agency (EPA), and the U.S. Department of Energy (DOE) to address contamination of operations at the Brookhaven National Laboratory (BNL) National Priorities List (NPL) site (site). Section XXXII of the IAG permits New York State to recover expenses for providing administrative and technical services pertaining to the site. The initial mechanism for recovery of State expenses was a DOE grant, identified as DE-FG02-91CH10493, which was established on September 30, 1991. Due to administrative requirements at DOE, the grant was no longer extended and was terminated on May 31, 2020. A Memorandum of Agreement (MOA) was executed on June 1, 2020, to facilitate reimbursement of State expenses moving forward. The grant contained closeout requirements, which included the submission of a report summarizing activities performed by the State of New York. The following sections present the site history and activities performed by New York State as well as the findings and conclusions.

54 ENVIRONMENTAL SCIENCES↗

Request for Information on Establishing a New Manufacturing Institute (DE-FOA-0002564)

Deep decarbonization of major industries such as metals manufacturing requires extensive process integration and controls to manage feedstocks, side reactions, heat, water, and waste streams. The scale of the energy and capital investment requires that process integration be validated to a high level of confidence with no bias. Industries such as steel production have very thin profit margins. Therefore, lack of confidence in process integration, product quality, and economics is a major deterrence to changes in manufacturing capital investment. Public sector investment in reconfigurable pilot testbeds and a first-of-a-kind plant would be necessary to de-risk technical and financial barriers prior to industry-wide buildout. DOE should consider a National Lab-led hub for the testbeds. Lab testbeds could be utilized in campaigns and allow multiple industrial partners to evaluate and validate technologies prior to making major capital investments.

08 HYDROGEN↗

Sister Rod Destructive Examinations (FY2021) Appendix J: Leaching of High Burnup Used Nuclear Fuel in De-ionized Water

As a part of the DOE NE High Burnup Spent Fuel Data Project, Oak Ridge National Laboratory (ORNL) is performing destructive examinations (DEs) of high burnup (HBU) (>45 GWd/MTU) spent nuclear fuel (SNF) rods from the North Anna Nuclear Power Station operated by Dominion Energy. The SNF rods, called sister rods or sibling rods, are all HBU and include four different kinds of fuel rod cladding: standard Zircaloy-4 (Zirc-4), low-tin Zirc-4, ZIRLO, and M5. The leaching experiment was a part of a larger study by Yadukrishnan Sasikumar in defending his doctoral thesis at The Open University, School of Engineering and Innovation [13]. It utilized post-CIRFT Sister Rod test specimens that were slated for disposal. The leaching experiment aims to understand the trends in the radiolytic dissolution of High Burnup Spent Nuclear Fuel (SNF) when exposed to water (e.g., in-reactor or in-pool cladding failures). Specimens from a baseline M5-clad rod and a heat-treated M5 rod were cut from the fractured CIRFT specimens and placed in 100 mL de-ionized water for a period of 128 days. Both radial and axial sections were cut to provide different surface areas of fuel in contact with the leachate. During the four-month exposure period, aliquot samples of the leachate were analyzed gamma spectroscopy and inductively coupled plasma mass spectrometry (ICP-MS). The analysis quantified the amount of fuel leached into the solutions and provided individual isotopic release fractions (of 30+ isotopes) which were compared as a function of time and surface area of fuel exposed.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗