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At least 307 records · Page 17
All sourcesNASA NTRSDOE OSTI
NASA NTRS2001

Photolysis Rate Coefficient Calculations in Support of SOLVE Campaign

The objectives for this SOLVE project were 3-fold. First, we sought to calculate a complete set of photolysis rate coefficients (j-values) for the campaign along the ER-2 and DC-8 flight tracks. En route to this goal, it would be necessary to develop a comprehensive set of input geophysical conditions (e.g., ozone profiles), derived from various climatological, aircraft, and remotely sensed datasets, in order to model the radiative transfer of the atmosphere accurately. These j-values would then need validation by comparison with flux-derived j-value measurements. The second objective was to analyze chemistry along back trajectories using the NASA/Goddard chemistry trajectory model initialized with measurements of trace atmospheric constituents. This modeling effort would provide insight into the completeness of current measurements and the chemistry of Arctic wintertime ozone loss. Finally, we sought to coordinate stellar occultation measurements of ozone (and thus ozone loss) during SOLVE using the Midcourse Space Experiment(MSX)/Ultraviolet and Visible Imagers and Spectrographic Imagers (UVISI) satellite instrument. Such measurements would determine ozone loss during the Arctic polar night and represent the first significant science application of space-based stellar occultation in the Earth's atmosphere.

Lloyd, Steven A.↗
NASA NTRS2001

Photolysis Rate Coefficient Calculations in Support of SOLVE Campaign

The objectives for this SOLVE project were 3-fold. First, we sought to calculate a complete set of photolysis rate coefficients (j-values) for the campaign along the ER-2 and DC-8 flight tracks. En route to this goal, it would be necessary to develop a comprehensive set of input geophysical conditions (e.g., ozone profiles), derived from various climatological, aircraft, and remotely sensed datasets, in order to model the radiative transfer of the atmosphere accurately. These j-values would then need validation by comparison with flux-derived j-value measurements. The second objective was to analyze chemistry along back trajectories using the NASA/Goddard chemistry trajectory model initialized with measurements of trace atmospheric constituents. This modeling effort would provide insight into the completeness of current measurements and the chemistry of Arctic wintertime ozone loss. Finally, we sought to coordinate stellar occultation measurements of ozone (and thus ozone loss) during SOLVE using the MSX/UVISI satellite instrument. Such measurements would determine ozone loss during the Arctic polar night and represent the first significant science application of space-based stellar occultation in the Earth's atmosphere.

Lloyd, Steven A.↗
NASA NTRS2004

Validation of EOS Aqua AMSR Sea Ice Products for East Antarctica

This paper presents results from AMSR-E validation activities during a collaborative international cruise onboard the RV Aurora Australis to the East Antarctic sea ice zone (64-65 deg.S, 110-120 deg.E) in the early Austral spring of 2003. The validation strategy entailed an IS-day survey of the statistical characteristics of sea ice and snowcover over a Lagrangian grid 100 x 50 km in size (demarcated by 9 drifting ice beacons) i.e. at a scale representative of Ah4SR pixels. Ice conditions ranged h m consolidated first-year ice to a large polynya offshore from Casey Base. Data sets collected include: snow depth and snow-ice interface temperatures on 24 (?) randomly-selected floes in grid cells within a 10 x 50 km area (using helicopters); detailed snow and ice measurements at 13 dedicated ice stations, one of which lasted for 4 days; time-series measurements of snow temperature and thickness at selected sites; 8 aerial photography and thermal-IR radiometer flights; other satellite products (SAR, AVHRR, MODIS, MISR, ASTER and Envisat MERIS); ice drift data; and ancillary meteorological (ship-based, meteorological buoys, twice-daily radiosondes). These data are applied to a validation of standard AMSR-E ice concentration, snowcover thickness and ice-temperature products. In addition, a validation is carried out of ice-surface skin temperature products h m the NOAA AVHRR and EOS MODIS datasets.

Massom, Rob↗
NASA NTRS2005

Characterization of Unsteady Flow Structures Around Tandem Cylinders for Component Interaction Studies in Airframe Noise

A joint computational and experimental study has been performed at NASA Langley Research Center to investigate the unsteady flow generated by the components of an aircraft landing gear system. Because the flow field surrounding a full landing gear is so complex, the study was conducted on a simplified geometry consisting of two cylinders in tandem arrangement to isolate and characterize the pertinent flow phenomena. This paper focuses on the experimental effort where surface pressures, 2-D Particle Image Velocimetry, and hot-wire anemometry were used to document the flow interaction around the two cylinders at a Reynolds Number of 1.66 x 10(exp 5), based on cylinder diameter, and cylinder spacing-todiameter ratios, L/D, of 1.435 and 3.70. Transition strips were applied to the forward cylinder to produce a turbulent boundary layer upstream of the flow separation. For these flow conditions and L/D ratios, surface pressures on both the forward and rear cylinders show the effects of L/D on flow symmetry, base pressure, and the location of flow separation and attachment. Mean velocities and instantaneous vorticity obtained from the PIV data are used to examine the flow structure between and aft of the cylinders. Shedding frequencies and spectra obtained using hot-wire anemometry are presented. These results are compared with unsteady, Reynolds-Averaged Navier-Stokes (URANS) computations for the same configuration in a companion paper by Khorrami, Choudhari, Jenkins, and McGinley (2005). The experimental dataset produced in this study provides information to better understand the mechanisms associated with component interaction noise, develop and validate time-accurate computer methods used to calculate the unsteady flow field, and assist in modeling of the radiated noise from landing gears.

Jenkins, Luther N.↗
NASA NTRS2013

ARM Research in the Equatorial Western Pacific: A Decade and Counting

The tropical western Pacific (TWP) is an important climatic region. Strong solar heating, warm sea surface temperatures, and the annual progression of the intertropical convergence zone (ITCZ) across this region generate abundant convective systems, which through their effects on the heat and water budgets have a profound impact on global climate and precipitation. In order to accurately evaluate tropical cloud systems in models, measurements of tropical clouds, the environment in which they reside, and their impact on the radiation and water budgets are needed. Because of the remote location, ground-based datasets of cloud, atmosphere, and radiation properties from the TWP region have come primarily from short-term field experiments. While providing extremely useful information on physical processes, these short-term datasets are limited in statistical and climatological information. To provide longterm measurements of the surface radiation budget in the tropics and the atmospheric properties that affect it, the Atmospheric Radiation Measurement program established a measurement site on Manus Island, Papua New Guinea, in 1996 and on the island republic of Nauru in late 1998. These sites provide unique datasets now available for more than 10 years on Manus and Nauru. This article presents examples of the scientific use of these datasets including characterization of cloud properties, analysis of cloud radiative forcing, model studies of tropical clouds and processes, and validation of satellite algorithms. New instrumentation recently installed at the Manus site will provide expanded opportunities for tropical atmospheric science.

tropical regions↗
NASA NTRSDate not supplied

TPSAS-NF1676L-17867-DND

In response to the exponential growth in science data analysis and visualization capabilities, data centers have been developing new processes to package and deliver large volumes of aggregated subsets of archived data. New standards are evolving to help data providers and application programmers manage the growing needs of the science community. These standards evolve from the best practices gleaned from new products and capabilities. The NASA Atmospheric Sciences Data Center (ASDC) has developed and deployed production provider-specific search and subset web applications for the CALIPSO, CERES, TES, and MOPITT missions. This presentation explores a CERES CCCM (CALIPSO, CloudSat, CERES, MODIS) data validation use case that leverages aggregated subset results from CERES CCCM (Level2), CERES SSF (Level2), and CALIPSO LIDAR (Level) datasets. Additionally, it examines the standards and formats that ASDC developers have applied to the delivered files as well as the implementation strategies for subsetting and processing the aggregated products.

Walter E Baskin↗
NASA NTRSDate not supplied

Evaluating and Exploring Extreme Precipitation in CHIRPS3, CHIMES, and the Climate Hazards Station Database

Between 2015 and 2019, the impacts and losses associated with droughts, floods, and hurricanes surged through the interaction of increasing exposure and more extreme weather and climate (Funk 2021). In 2020, the Aon-Benfield Reinsurance Company reported that cyclones, floods, and droughts resulted in $165 billion (USD) in losses. For 2020, EM-DAT lists 363 flood, landslide, storm, and drought events impacting some 98 million people. As hazards mount, models indicate more variable precipitation, and observations indicate increasing extremes in humid regions, yet the small number of available gauge observations is declining. In this talk we briefly introduce two new resources: version 3 of the 1981-near present Climate Hazards center Infrared Precipitation with Stations (CHIRPS3) archive, and the 2000-near present Climate Hazards IMErg with Stations archive (CHIMES). The satellite-only CHIRP3 and CHIME components are based, respectively, on geostationary thermal infrared Cold Cloud Duration (CCD) values and the NASA GPM IMERGlate product. These archives benefit from thousands of station observations. In addition to standard global sources, the Climate Hazards station database includes about 5,000 additional stations in humid tropical and sub-tropical areas associated with likely increases in extreme rainfall. While effectively monitoring extreme precipitation is important to humanitarian agencies like FEWS NET, and to hydrologic modeling applications (a, b), evaluations of the widely used CHIRPS2 product indicate a propensity to underestimate extremes. Here, we explain the source of this problem. Then, focusing on pentad totals in 12 well-gauged regions, we use the high-quality gauge-based REGEN dataset to show that CHIRP3 and CHIME perform substantially better than CHIRP2. We examine trends in extremes in these validation regions, comparing REGEN results with values from the satellite-only CHIRP2, CHIRP3, CHIME and the gauge-enhanced CHIRP2, CHIRP3, CHIME. Trends in dry and humid regions are contrasted and compared. We conclude with global evaluations of the pentad CHIRP3, CHIRPS3, CHIME, CHIMES, and Climate Hazards station database products. How does the performance of the shorter period of record CHIME compare with CHIRP3? We anticipate that the sophisticated microwave-based IMERGlate inputs into CHIME will perform better. Where do we see the largest increases in extremes in these products? How well might CHIRPS3 and CHIMES perform in the context of humanitarian assistance efforts?

C Funk↗
NASA NTRSDate not supplied

Satellite-Assisted Particulate Matter (SAPM) for the Models, In situ, and Remote Sensing of Aerosols (MIRA) Working Group

Models, In situ, and Remote sensing of Aerosols (MIRA) is an international working group that provides a forum for collaborations amongst these three atmospheric aerosol communities. MIRA consists of a collection of interdisciplinary and independently funded Topic/Project groups with clear goals and generally characterized by requests for additional scientific data. The Satellite-Assisted Particulate Matter (SAPM) Topic group focuses on the study of fine particulate matter (PM2.5), as it is a major contributor to air pollution and negatively impacts human health. Our group aims to provide intercomparisons of various methods and techniques for estimating surface PM2.5 assisted by satellite remote sensors (passive and active), global aerosol models, and in situ aerosol measurements. The overall motivation of our work is to enhance PM2.5 coverage beyond in situ ground stations, which can be limited. In this presentation, we provide an overview of various PM2.5 estimation approaches by current SAPM team members, as each approach has its own strengths and limitations. One approach uses near-surface aerosol extinction retrievals from the spaceborne Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) and an assumed value of mass extinction efficiency to derive PM2.5 concentrations (Toth et al 2019). A study using this method found a promising agreement (R=0.60; slope=0.89) with U.S. Environmental Protection Agency (EPA) in situ PM2.5 measurements over the contiguous United States (CONUS) for a 12-year (2007-2018) period (Toth et al 2022). In a different approach combining spaceborne lidar and a model, the Cloud Aerosol Transport System (CATS) lidar and Goddard Earth Observing System (GEOS) model are blended in an ensemble variational assimilation scheme to retrieve aerosol extinction and convert speciated mass concentrations to total PM2.5. A recent study (Matus et al in prep.) found agreement within 2 μg/m3 over the CONUS on the 2016 annual mean when compared to EPA ground-based measurements. Another study explored trends in city aerosol optical depth (AOD) from a spaceborne passive remote sensor, Moderate Resolution Imaging Spectroradiometer (MODIS), and found that these trends agree well with trends in city surface PM2.5, which provides confidence in the use of city AOD for city PM2.5 trend studies (Vohra et al 2021). In a follow-on study, steep and significant trends (~2.5 to 7.8% a-1) in AOD are found for several South Asian cities (e.g., Bangalore and Hyderabad), suggesting rapid growth in PM2.5 (Vohra et al 2022). Also in this presentation, we report results on our current collective SAPM study of India, a country that exhibits high levels of PM2.5 pollution. We show the temporal (i.e., seasonal) and spatial variability of PM2.5 over India using the CALIOP and CATS+model approaches, comparisons between the estimated PM2.5 from the retrieval schemes, and validation with in situ PM2.5 ground-based observations from the Central Pollution Control Board in India. This region provides us with an excellent case study to test our PM2.5 retrievals in heavily polluted scenes and over a complex and varying topography. The SAPM Topic group actively seeks international participants/collaborators in our group, including those working with in situ aerosol measurements (e.g., ACTRIS). We are interested in aerosol datasets in order to either improve our PM2.5 estimates from various approaches (e.g., using in situ mass scattering/absorption coefficient and aerosol hygroscopic properties for various aerosol species) and/or validate the PM2.5 estimates (e.g., using in situ ground-based PM2.5 concentrations).

Travis D Toth↗
NASA NTRS2015

Validation of Long-Term Global Aerosol Climatology Project Optical Thickness Retrievals Using AERONET and MODIS Data

A comprehensive set of monthly mean aerosol optical thickness (AOT) data from coastal and island AErosol RObotic NETwork (AERONET) stations is used to evaluate Global Aerosol Climatology Project (GACP) retrievals for the period 1995-2009 during which contemporaneous GACP and AERONET data were available. To put the GACP performance in broader perspective, we also compare AERONET and MODerate resolution Imaging Spectroradiometer (MODIS) Aqua level-2 data for 2003-2009 using the same methodology. We find that a large mismatch in geographic coverage exists between the satellite and ground-based datasets, with very limited AERONET coverage of open-ocean areas. This is especially true of GACP because of the smaller number of AERONET stations at the early stages of the network development. Monthly mean AOTs from the two over-the-ocean satellite datasets are well-correlated with the ground-based values, the correlation coefficients being 0.81-0.85 for GACP and 0.74-0.79 for MODIS. Regression analyses demonstrate that the GACP mean AOTs are approximately 17%-27% lower than the AERONET values on average, while the MODIS mean AOTs are 5%-25% higher. The regression coefficients are highly dependent on the weighting assumptions (e.g., on the measure of aerosol variability) as well as on the set of AERONET stations used for comparison. Comparison of over-the-land and over-the-ocean MODIS monthly mean AOTs in the vicinity of coastal AERONET stations reveals a significant bias. This may indicate that aerosol amounts in coastal locations can differ significantly from those in adjacent open-ocean areas. Furthermore, the color of coastal waters and peculiarities of coastline meteorological conditions may introduce biases in the GACP AOT retrievals. We conclude that the GACP and MODIS over-the-ocean retrieval algorithms show similar ranges of discrepancy when compared to available coastal and island AERONET stations. The factors mentioned above may limit the performance of the validation procedure and cause us to caution against a direct extrapolation of the presented validation results to the entirety of the GACP dataset.

MODIS (radiometry)↗
NASA NTRS2011

Impact of Optimized land Surface Parameters on the Land-Atmosphere Coupling in WRF Simulations of Dry and Wet Extremes

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of both planetary boundary layer (PBL) and land surface temperature and moisture budgets, as well as controlling feedbacks with clouds and precipitation that lead to the persistence of dry and wet regimes. Recent efforts to quantify the strength of L-A coupling in prediction models have produced diagnostics that integrate across both the land and PBL components of the system. In this study, we examine the impact of improved specification of land surface states, anomalies, and fluxes on coupled WRF forecasts during the summers of extreme dry (2006) and wet (2007) conditions in the U.S. Southern Great Plains. The improved land initialization and surface flux parameterizations are obtained through the use of a new optimization and uncertainty module in NASA's Land Information System (LIS-OPT), whereby parameter sets are calibrated in the Noah land surface model and classified according to the land cover and soil type mapping of the observations and the full domain. The impact of the calibrated parameters on the a) spin up of land surface states used as initial conditions, and b) heat and moisture fluxes of the coupled (LIS-WRF) simulations are then assessed in terms of ambient weather, PBL budgets, and precipitation along with L-A coupling diagnostics. In addition, the sensitivity of this approach to the period of calibration (dry, wet, normal) is investigated. Finally, tradeoffs of computational tractability and scientific validity (e.g.,. relating to the representation of the spatial dependence of parameters) and the feasibility of calibrating to multiple observational datasets are also discussed.

Kumar, Sujay↗
NASA NTRS2017

Interpretable Categorization of Heterogeneous Time Series Data

We analyze data from simulated aircraft encounters to validate and inform the development of a prototype aircraft collision avoidance system. The high-dimensional and heterogeneous time series dataset is analyzed to discover properties of near mid-air collisions (NMACs) and categorize the NMAC encounters. Domain experts use these properties to better organize and understand NMAC occurrences. Existing solutions either are not capable of handling high-dimensional and heterogeneous time series datasets or do not provide explanations that are interpretable by a domain expert. The latter is critical to the acceptance and deployment of safety-critical systems. To address this gap, we propose grammar-based decision trees along with a learning algorithm. Our approach extends decision trees with a grammar framework for classifying heterogeneous time series data. A context-free grammar is used to derive decision expressions that are interpretable, application-specific, and support heterogeneous data types. In addition to classification, we show how grammar-based decision trees can also be used for categorization, which is a combination of clustering and generating interpretable explanations for each cluster. We apply grammar-based decision trees to a simulated aircraft encounter dataset and evaluate the performance of four variants of our learning algorithm. The best algorithm is used to analyze and categorize near mid-air collisions in the aircraft encounter dataset. We describe each discovered category in detail and discuss its relevance to aircraft collision avoidance.

Drones↗
NASA NTRS2021

Exploring Sentinel-1 and Sentinel-2 diversity for Flood inundation mapping using deep learning

Identification of flood water extent from satellite images has historically relied on either synthetic aperture radar (SAR) or multi-spectral (MS) imagery. MS sensors are limited to cloud free conditions, whereas SAR imagery is plagued by noise-like speckle. Prior studies that use combinations of MS and SAR data to overcome individual limitations of these sensors have not fully examined sensitivity of flood mapping performance to different combinations of SAR and MS derived spectral indices or band transformations in color space. This study explores the use of diverse bands of Sentinel 2 (S2) through well-established water indices and Sentinel 1 (S1) derived SAR imagery along with their combinations to assess their capability for generating accurate flood inundation maps. The robustness in performance of S-1 and S-2 band combinations was evaluated using 446 hand labeled flood inundation images spanning across 11 flood events from Sen1Floods11 dataset which are highly diverse in terms of land cover as well as location. A modified K-fold cross validation approach is used to evaluate the performance of 32 combinations of S1 and S2 bands using a fully connected deep convolutional neural network known as U-Net. Our results indicated that usage of elevation information has improved the capability of S1 imagery to produce more accurate flood inundation maps. Compared to a median F1 score of 0.62 when using only S1 bands, the combined use of S1 and elevation information led to an improved median F1 score of 0.73. Water extraction indices based on S2 bands have a statistically significant superior performance in comparison to S1. Among all the band combinations, HSV (Hue, Saturation, Value) transformation of S2 bands provides a median F1 score of 0.9, outperforming the commonly used water spectral indices owing to HSV’s transformation’s superior contrast distinguishing abilities. Additionally, U-Net algorithm was able to learn the relationship between raw S2 based water extraction indices and their corresponding raw S2 bands, but not of HSV owing to relatively complex computation involved in the latter. Results of the paper establishes important benchmarks for the extension of S1 and S2 data-based flood inundation mapping efforts over large spatial extents.

Goutam Konapala↗
NASA NTRSDate not supplied

Evaluation of Spectral Band Adjustment Factors for Cross-Calibration of Visible Imagers

The CERES EBAF dataset provides TOA SW and LW fluxes for long-term monitoring of the Earth’s energy balance and to validate climate models. The EBAF products, based on the Terra and Aqua CERES instrument observed radiances, rely on coincident measurements from the onboard MODIS imagers to determine cloud properties that are used in the angular distribution model scene selection required to convert the CERES observed radiances into flux values. Once the Terra and Aqua orbits start drifting outside of their 15-minute window, the CERES project will rely solely on the NOAA-20 CERES observations. A seamless transition of fluxes and clouds can only occur if the analogous MODIS and VIIRS channels are properly inter-calibrated. The visible band (0.65 µm) in MODIS (band 1) and VIIRS (M5 or I1) is critical for retrieving the cloud mask and optical depth. The spectral response functions (SRF) of these bands differ noticeably and will require scene dependent spectral band adjustment factors (SBAF) for proper radiometric scaling between them. Fortunately, the VIIRS I1 and M5 bands are calibrated using the same solar diffuser as a reference, which implies that band reflectance differences must be due to the spectral disparity. The coincident I1 and M5 TOA reflectance measurements provide the optimal opportunity to validate SBAFs over many surface and cloud conditions. The CERES project maintains SCIAMACHY, GOME-2, Hyperion, and radiative transfer model-based scene-stratified hyper-spectral reflectance measurements that can be convolved with sensor pair SRFs to compute the corresponding SBAF. This study will evaluate the SCIAMACHY, GOME-2, Hyperion, and RTM based SBAFs over tropical ocean targets used in SNO inter-calibration of MODIS and VIIRS, including clear-sky ocean, deep convective clouds (DCC), and liquid cloud targets in terms of their applicability to absolute intercomparison of visible imagers. The large SCIAMACHY and GOME-2 footprints and the lack of Hyperion cloudy scenes will impact the resulting SBAFs and necessitates the need for future CLARREO hyper-spectral reflectances to decrease SBAF uncertainties Preliminary results indicate that the SCIAMACHY and GOME-2 based SBAFs for the VIIRS I1 and M5 band pairs may differ by 1.5% for some ATO scene types. Because most of the modern GEOs visible band SRFs encompass the VIIRS I1 band SRF, these evaluations are critical to ensure that the MODIS, VIIRS, and GEO clouds and fluxes are consistent. SBAFs for Libya-4, Dome-C and other Earth invariant target will also be evaluated.

D. R. Doelling↗
NASA NTRSDate not supplied

Evaluation of Spectral Band Adjustment Factors for Cross-Calibration of Visible Imagers

The NASA CERES EBAF dataset provides TOA SW and LW fluxes for long-term monitoring of the Earth’s energy balance and to validate climate models. The EBAF products, based on the Terra, Aqua, and NOAA20 CERES instrument observed radiances, rely on coincident measurements from the onboard MODIS or VIIRS imagers to determine cloud properties used for angular distribution model scene selection, which is required to convert the CERES observed radiances into flux values. Furthermore, CERES utilizes geostationary imager (GEO) hourly fluxes and clouds to infer the regional averaged daily flux in the SYN1deg product. A seamless transition of fluxes and clouds can only occur if the analogous MODIS, VIIRS, and GEO channels are properly inter-calibrated. The analogous band SRFs differ noticeably and require scene dependent spectral band adjustment factors (SBAF) for proper radiometric scaling between them. Given their disparate but overlapping SRFs, the coincident VIIRS I1 and M5 band TOA reflectance measurements provide the optimal opportunity to validate SBAFs over many surface and cloud conditions. The CERES project maintains SCIAMACHY, GOME-2, and Hyperion scene-stratified hyper-spectral reflectance measurements that can be convolved with sensor pair SRFs to compute the corresponding SBAF. This study highlights the SCIAMACHY, GOME-2, and Hyperion based SBAFs for different MODIS, VIIRS, and GEO inter-calibration targets, including all-sky tropical ocean (ATO), Libya-4, Dome-C, and deep convective clouds. To mitigate the observed sensor radiance fluctuations due to atmospheric absorption and aerosol variations, the Earth target observed radiances are correlated with multiple atmospheric parameters, such as precipitable water and ozone. The remaining M5 and I1 mean spectral band radiance difference should be resolved by the SBAF correction. The formulation of hyper-spectral sensor based SBAFs and validation methods can be verified in future utilizing high-accuracy, SI-traceable hyper-spectral measurements from CLARREO Pathfinder.

David R Doelling↗
NASA NTRSDate not supplied

Transcriptomics Processing Pipelines for Space Biology: An Open Source and Consensus-Driven Approach

Transcriptomics holds significant value in elucidating the relationship between gene expression, experimental factors, biological factors, and various types of omics data. Enhancing our understanding of these connections is paramount for foundational biology, which plays a pivotal role in devising solutions for challenges pertinent to both space travel and terrestrial life. The NASA GeneLab project, part of the Open Science Data Repository (OSDR.nasa.gov), seeks to accelerate space biology research through cataloging and democratizing ‘omics data, including transcriptomics. Since raw omics data are largely inaccessible to non-bioinformaticians, GeneLab works with the scientific community via the Open Science Analysis Working Groups (AWGs) to develop standard processing pipelines to generate and publish processed data. Unlike raw data, processed data have greater immediate value to diverse users with varying technical backgrounds and computational capabilities. Standardizing processing workflows is essential to match the pace of raw data generation, ensure reproducibility, and enable standardized processed data for comparison across datasets. As of June 2023, transcriptomics studies comprise over half of GeneLab datasets hosted on the OSDR, including data from bulk RNA-seq and Affymetrix or Agilent 1-Channel DNA microarray assays. In collaboration with the AWGs, GeneLab developed consensus processing pipelines for these transcriptomics data types that includes quality control, background correction (microarray only), data normalization and quantification, culminating in the detection and annotation of differentially expressed genes. The work presented here describes Nextflow implementations of GeneLab’s consensus transcriptomics pipelines that automates and accelerates processing of these datasets. In addition to the core data processing, these workflows also include raw data staging and a robust verification and validation program to identify errors in real-time, stop additional downstream computation, and preserve computational resources. These workflows are used to generate GeneLab processed data hosted on the OSDR, and are publicly available as open source software for others to use at: https://github.com/nasa/GeneLab_Data_Processing.

Jonathan Oribello↗
NASA NTRS2001

Noninvasive assessment of mitral inertness: clinical results with numerical model validation

Inertial forces (Mdv/dt) are a significant component of transmitral flow, but cannot be measured with Doppler echo. We validated a method of estimating Mdv/dt. Ten patients had a dual sensor transmitral (TM) catheter placed during cardiac surgery. Doppler and 2D echo was performed while acquiring LA and LV pressures. Mdv/dt was determined from the Bernoulli equation using Doppler velocities and TM gradients. Results were compared with numerical modeling. TM gradients (range: 1.04-14.24 mmHg) consisted of 74.0 +/- 11.0% inertial forcers (range: 0.6-12.9 mmHg). Multivariate analysis predicted Mdv/dt = -4.171(S/D (RATIO)) + 0.063(LAvolume-max) + 5. Using this equation, a strong relationship was obtained for the clinical dataset (y=0.98x - 0.045, r=0.90) and the results of numerical modeling (y=0.96x - 0.16, r=0.84). TM gradients are mainly inertial and, as validated by modeling, can be estimated with echocardiography.

NASA Discipline Cardiopulmonary↗
NASA NTRS1998

Exploration of the Moon with Remote Sensing, Ground-Penetrating Radar, and the Regolith-Evolved Gas Analyzer (REGA)

There are two important reasons to explore the Moon. First, we would like to know more about the Moon itself: its history, its geology, its chemistry, and its diversity. Second, we would like to apply this knowledge to a useful purpose. namely finding and using lunar resources. As a result of the recent Clementine and Lunar Prospector missions, we now have global data on the regional surface mineralogy of the Moon, and we have good reason to believe that water exists in the lunar polar regions. However, there is still very little information about the subsurface. If we wish to go to the lunar polar regions to extract water, or if we wish to go anywhere else on the Moon and extract (or learn) anything at all, we need information in three dimensions an understanding of what lies below the surface, both shallow and deep. The terrestrial mining industry provides an example of the logical steps that lead to an understanding of where resources are located and their economic significance. Surface maps are examined to determine likely locations for detailed study. Geochemical soil sample surveys, using broad or narrow grid patterns, are then used to gather additional data. Next, a detailed surface map is developed for a selected area, along with an interpretation of the subsurface structure that would give rise to the observed features. After that, further sampling and geophysical exploration are used to validate and refine the original interpretation, as well as to make further exploration/ mining decisions. Integrating remotely sensed, geophysical, and sample datasets gives the maximum likelihood of a correct interpretation of the subsurface geology and surface morphology. Apollo-era geophysical and automated sampling experiments sought to look beyond the upper few microns of the lunar surface. These experiments, including ground-penetrating radar and spectrometry, proved the usefulness of these methods for determining the best sites for lunar bases and lunar mining operations.

Cooper, B. L.↗
NASA NTRS2000

Mid-Latitude Atmospheric Variability Between 20-60 KM from Rocketsonde Measurements

The information obtained from deployment of instrumented meteorological rockets provides middle atmospheric data in a region that is difficult to measure by other means. In the last two decades, in-situ measurements of the middle atmosphere have become less frequent and only originate from a handful of locations. However, the value of these measurements continues to be proven through the validation of remote sensing techniques, support of other payloads sampling the region, and as importantly, the continued study of the rocket datasets with the details and trends that they hold. Wallops Island (37.8 N, 75.5 W) has one of the longest meteorological rocket data records available with relatively few system changes. Two particular periods from this record are studied: (1) January/February and (2) July/August, 1977. Both data sets consist of Super-Loki meteorological rockets with a Datasonde and Starute payload, which yield temperature and wind profiles. The January/February set consists of almost daily launches with days with multiple launches interspersed through January. In the July/August set, rockets were launched for thirty consecutive days at nearly the same time daily from Wallops Island. This campaign was immediately followed by sets of multiple launches with up to six launches per day separated by hours and in some cases minutes. The unique nature of the data allows a detailed examination of the atmosphere's short-term variability. These results are compared to the current views of middle atmospheric dynamics and turbulence from altitudes in the range of 20-60 km.

Schauer, A. G.↗